mRNA_L-elsbetiae_contig6867.15626.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Match: A0A6H5KGL7_9PHAE (SGL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGL7_9PHAE) HSP 1 Score: 256 bits (655), Expect = 3.190e-81 Identity = 118/139 (84.89%), Postives = 125/139 (89.93%), Query Frame = 3 Query: 276 RQRQVEMVADGFDFTEGTQWVDDQEAGRQYLLFSDIPKNRIWKWEEGGGLFTLGKSLFLDRSGCRGNHCSALALPGSNGLMLAPGSGEVIMCEHGDRRVTRMENNGTKTPLSTHFNGHRLNSPNDLAFSKRGDLYFTDP 692 R VE+VADGF FTEGTQWV D EA RQYLLFSDI NRIWKWEEGGGLFTLGKSLFLDRSGCRG HCS++ + GSNGLML PGSGEV+MCEHGDRRVTRMENNGTKTPL+THFNGHRLNSPNDLA SKRGD+YFTDP Sbjct: 59 RGATVEVVADGFGFTEGTQWVHDTEADRQYLLFSDIANNRIWKWEEGGGLFTLGKSLFLDRSGCRGAHCSSMEMSGSNGLMLVPGSGEVVMCEHGDRRVTRMENNGTKTPLATHFNGHRLNSPNDLAISKRGDIYFTDP 197
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Match: A0A835YH00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH00_9STRA) HSP 1 Score: 183 bits (465), Expect = 6.660e-52 Identity = 87/145 (60.00%), Postives = 108/145 (74.48%), Query Frame = 3 Query: 285 QVEMVADGFDFTEGTQWVDDQEAGRQYLLFSDIPKNRIWKWEEGGGLFTLGKSLFLDRSGCR--GNHCSALALPGSNGLMLAPGS-----GEVI--MCEHGDRRVTRMENNGTKTPLSTHFNGHRLNSPNDLAFSKRGDLYFTDP 692 ++E+VA+GF + EG WV D+E GR+YLLFSD+ NR+WKWEEGGGLFTLGK++FL+RSGCR C+ L PG+NGL P S +V+ MCEHG+RRV+ M +GTK L+TH +G RLNSPNDLAF K GDLYFTDP Sbjct: 84 RIEVVAEGFGWAEGPVWVSDKEQGREYLLFSDVVNNRVWKWEEGGGLFTLGKTVFLERSGCRTDAERCAQLKEPGANGLARVPASLVGNDNDVVLAMCEHGERRVSLMRPDGTKVALATHHDGRRLNSPNDLAFGKNGDLYFTDP 228
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Match: W7T4M9_9STRA (Gluconolactonase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4M9_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.470e-45 Identity = 84/170 (49.41%), Postives = 107/170 (62.94%), Query Frame = 3 Query: 285 QVEMVADGFDFTEGTQWVDDQE-AGRQYLLFSDIPKNRIWKWEEGGGLFTLGKSLFLDRSGCR---------------------------------GNHCSALALPGSNGLMLAPGSGEVIMCEHGDRRVTRMENNGTKTPLSTHFNGHRLNSPNDLAFSKRGDLYFTDP 692 Q+E++A+G + EG WV D++ A +LL+SD+ KN I++WEEGGGLFT+G+S+FL SGCR G C+ L PGSNGL L PGSG V+MCEHG+RRV+R+E NG+ TPL+TH+ G RLNSPNDL F GDLYFTDP Sbjct: 59 QLEIIAEGNLWAEGPLWVSDEDSADGGFLLWSDVKKNLIYRWEEGGGLFTIGRSVFLKESGCRPSLPPLASGGETETKDGNSSSDESCSDGICGDDGARCATLREPGSNGLTLEPGSGLVVMCEHGERRVSRLEANGSFTPLATHYQGRRLNSPNDLVFGPGGDLYFTDP 228
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Match: UPI001B819351 (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Nitrospira defluvii TaxID=330214 RepID=UPI001B819351) HSP 1 Score: 133 bits (334), Expect = 8.460e-34 Identity = 67/139 (48.20%), Postives = 88/139 (63.31%), Query Frame = 3 Query: 276 RQRQVEMVADGFDFTEGTQWVDDQEAGRQYLLFSDIPKNRIWKWEEGGGLFTLGKSLFLDRSGCRGNHCSALALPGSNGLMLAPGSGEVIMCEHGDRRVTRMENNGTKTPLSTHFNGHRLNSPNDLAFSKRGDLYFTDP 692 R ++E + DGF + EG W E YLLFSDIP N ++KW+ G G SLF+ SG G+ A PGSNGL L G +++C HGDR++ R+E++GT PL H++GH+LNSPNDL F+ GDLYFTDP Sbjct: 45 RDARLEKIVDGFTWVEGPVWHKQGE----YLLFSDIPANAVYKWKPGEGA-----SLFVKNSGYSGSTPYAGKEPGSNGLTL-DAQGRLVLCRHGDRQIGRLESHGTMVPLVDHYDGHKLNSPNDLVFTSNGDLYFTDP 173
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Match: A0A517ZBM2_9PLAN (Gluconolactonase n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZBM2_9PLAN) HSP 1 Score: 133 bits (334), Expect = 1.140e-33 Identity = 74/138 (53.62%), Postives = 90/138 (65.22%), Query Frame = 3 Query: 285 QVEMVADGFDFTEGTQWVD--DQEAGRQYLLFSDIPKNRIWKWEEGGGLFTLGKSLFLDRSGCRGNHCSALALPGSNGLMLAPGSGEVIMCEHGDRRVTRMENNGTKTPLSTHFNGHRLNSPNDLAFSKRGDLYFTDP 692 ++E++A GF++TEG WV D EAG YLLFSDIP+N I+KW EG G+ SLF+ SG G A PGSNGL+L P G ++ CEHGDRRV+ + NG K L +NG RLNSPND F GDLYFTDP Sbjct: 57 RLEVIASGFEWTEGPVWVPGKDDEAG--YLLFSDIPRNSIFKWVEGKGI-----SLFMKPSGYTG-FVDYGAEPGSNGLLLDP-QGRLVCCEHGDRRVSVVTENGGKMTLVDSYNGKRLNSPNDAVFMSNGDLYFTDP 185
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Match: A0A534N9W9_9DELT (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534N9W9_9DELT) HSP 1 Score: 133 bits (334), Expect = 1.210e-33 Identity = 70/135 (51.85%), Postives = 86/135 (63.70%), Query Frame = 3 Query: 288 VEMVADGFDFTEGTQWVDDQEAGRQYLLFSDIPKNRIWKWEEGGGLFTLGKSLFLDRSGCRGNHCSALALPGSNGLMLAPGSGEVIMCEHGDRRVTRMENNGTKTPLSTHFNGHRLNSPNDLAFSKRGDLYFTDP 692 +E +ADGF + EG W YLLFSDIP N ++KW+EGGG+ SLFL SG G+ A PGSNGL SG +++ EHGDRR+ R+EN+G KT L+ + G RLNSPNDL F GDLYFTDP Sbjct: 66 LEKLADGFKWVEGPVW----NRKENYLLFSDIPNNSVFKWQEGGGV-----SLFLKPSGYSGSAPFAGKEPGSNGLTF-DSSGRLVLAEHGDRRIARLENDGRKTILADRYAGKRLNSPNDLVFKSNGDLYFTDP 190
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Match: A0A3C1H9A8_9BACT (Gluconolactonase n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3C1H9A8_9BACT) HSP 1 Score: 132 bits (331), Expect = 3.740e-33 Identity = 65/139 (46.76%), Postives = 94/139 (67.63%), Query Frame = 3 Query: 276 RQRQVEMVADGFDFTEGTQWVDDQEAGRQYLLFSDIPKNRIWKWEEGGGLFTLGKSLFLDRSGCRGNHCSALALPGSNGLMLAPGSGEVIMCEHGDRRVTRMENNGTKTPLSTHFNGHRLNSPNDLAFSKRGDLYFTDP 692 ++ ++E +A+GFD++EG W+ + YL+FSD+P+N+I+KW EG ++FL+ SG G+ PGSNGL + G ++MCEHGDRRVTR+E NG KT L+ ++ +R NSPNDL F+ +GDLYFTDP Sbjct: 67 KEARIEKLAEGFDWSEGPVWIKEGS----YLVFSDVPQNKIFKWSEGNPA-----TVFLEPSGYTGSVPRG-GEPGSNGLTV-DAQGRLVMCEHGDRRVTRLERNGRKTTLARYYKFYRFNSPNDLVFNSKGDLYFTDP 194
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Match: A0A532CMW6_9BACT (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532CMW6_9BACT) HSP 1 Score: 130 bits (326), Expect = 1.070e-32 Identity = 65/139 (46.76%), Postives = 89/139 (64.03%), Query Frame = 3 Query: 276 RQRQVEMVADGFDFTEGTQWVDDQEAGRQYLLFSDIPKNRIWKWEEGGGLFTLGKSLFLDRSGCRGNHCSALALPGSNGLMLAPGSGEVIMCEHGDRRVTRMENNGTKTPLSTHFNGHRLNSPNDLAFSKRGDLYFTDP 692 + ++E +ADGF + EG W ++ G YLLFSDIP N ++KW+ G G+ SLFL SG G A PGSNGL G +++C HGDR++ R+E+NGT PL+ ++GH++NSPNDL F GD+YFTDP Sbjct: 37 KDAKLEKIADGFTWVEGPVW--HEQGG--YLLFSDIPANSVYKWKPGEGV-----SLFLKNSGYSGTAPFAGKEPGSNGLAF-DAQGRLVLCRHGDRQIGRLESNGTIAPLADRYDGHKINSPNDLVFKSNGDVYFTDP 165
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Match: A0A7C5EZE2_9BACT (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7C5EZE2_9BACT) HSP 1 Score: 128 bits (321), Expect = 3.590e-32 Identity = 65/136 (47.79%), Postives = 88/136 (64.71%), Query Frame = 3 Query: 285 QVEMVADGFDFTEGTQWVDDQEAGRQYLLFSDIPKNRIWKWEEGGGLFTLGKSLFLDRSGCRGNHCSALALPGSNGLMLAPGSGEVIMCEHGDRRVTRMENNGTKTPLSTHFNGHRLNSPNDLAFSKRGDLYFTDP 692 ++E +ADGF + EG W + A LLFSDIP N +++WEEG G+ FL SG G+ A PGSNGL G++++C+HGDR++ R+E +GT T L+ +NGHR+NSPNDL F+ GDLYFTDP Sbjct: 17 KLEKIADGFTWVEGPVWDKKERA----LLFSDIPANTVYRWEEGQGV-----RPFLKPSGYSGSAPFAGKEPGSNGLTFDE-KGQLVLCKHGDRQIARLEADGTLTVLADRYNGHRINSPNDLVFTSNGDLYFTDP 142
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Match: UPI001E43FAC1 (SMP-30/gluconolactonase/LRE family protein n=2 Tax=unclassified Rhodopirellula TaxID=2624920 RepID=UPI001E43FAC1) HSP 1 Score: 128 bits (322), Expect = 5.370e-32 Identity = 70/137 (51.09%), Postives = 90/137 (65.69%), Query Frame = 3 Query: 285 QVEMVADGFDFTEGTQWVDDQEAGRQ-YLLFSDIPKNRIWKWEEGGGLFTLGKSLFLDRSGCRGNHCSALALPGSNGLMLAPGSGEVIMCEHGDRRVTRMENNGTKTPLSTHFNGHRLNSPNDLAFSKRGDLYFTDP 692 ++E++A GF +TEG WV ++ G + LLFSDIP+N I+KW E GG+ LFL SG GN L PGSNGLML G ++MCEHGDRRV+ + +G K L ++ G RLNSPNDL F K G+L+FTDP Sbjct: 53 KIEVLASGFTWTEGPVWVPAKKDGDEGALLFSDIPRNSIFKWTESGGV-----ELFLKPSGYTGNTYYGLE-PGSNGLML-DAKGRLVMCEHGDRRVSVLTVDGGKQTLVDNYQGKRLNSPNDLVFDKNGNLFFTDP 182 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6867.15626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6867.15626.1 >prot_L-elsbetiae_contig6867.15626.1 ID=prot_L-elsbetiae_contig6867.15626.1|Name=mRNA_L-elsbetiae_contig6867.15626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp GFTLLGLNCLVREGLKTKWILEYVVNDSDEAEPQRSGILSEGISPHRGVIback to top mRNA from alignment at L-elsbetiae_contig6867:4465..8084+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6867.15626.1 ID=mRNA_L-elsbetiae_contig6867.15626.1|Name=mRNA_L-elsbetiae_contig6867.15626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3620bp|location=Sequence derived from alignment at L-elsbetiae_contig6867:4465..8084+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6867:4465..8084+ >mRNA_L-elsbetiae_contig6867.15626.1 ID=mRNA_L-elsbetiae_contig6867.15626.1|Name=mRNA_L-elsbetiae_contig6867.15626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1086bp|location=Sequence derived from alignment at L-elsbetiae_contig6867:4465..8084+ (Laminarionema elsbetiae ELsaHSoW15)back to top |