mRNA_L-elsbetiae_contig6831.15591.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Match: A0A6H5L2F5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2F5_9PHAE) HSP 1 Score: 214 bits (545), Expect = 3.360e-62 Identity = 110/118 (93.22%), Postives = 114/118 (96.61%), Query Frame = 3 Query: 3 LLVSTALILLSERLGPWMTVCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGTAVTLVDPATFMPIAKGLLYVSTVLTVTSGSGYLRAAWPALMGK 356 LLVSTALILLSERLGPWMTVCSAIILCREL ISALREWMAQLGLRETVKVGNAGKWKTATQM+AI+MLLLLEPG AVTLV+PAT MPIAK LLYVSTVLTVTSGSGYL+AAWPALMGK Sbjct: 226 LLVSTALILLSERLGPWMTVCSAIILCRELAISALREWMAQLGLRETVKVGNAGKWKTATQMMAITMLLLLEPGAAVTLVNPATAMPIAKSLLYVSTVLTVTSGSGYLKAAWPALMGK 343
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Match: A0A835ZDG0_9STRA (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDG0_9STRA) HSP 1 Score: 149 bits (377), Expect = 8.070e-39 Identity = 76/118 (64.41%), Postives = 93/118 (78.81%), Query Frame = 3 Query: 3 LLVSTALILLSERLGPWMTVCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGTAVTLVDPATFMPIAKGLLYVSTVLTVTSGSGYLRAAWPALMGK 356 L+V+ A+ILLSERLG WMTVC++IILCRE+ +SALREWMAQ+G R VKVG AGK KTA QM+A++ LLLL+P A ++ P F K L+ S VLTVTSG+GYL+AAWPALMGK Sbjct: 115 LIVAVAMILLSERLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAF-DAGKWLMIFSAVLTVTSGTGYLQAAWPALMGK 231
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Match: W7TJV8_9STRA (Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJV8_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.560e-26 Identity = 65/121 (53.72%), Postives = 88/121 (72.73%), Query Frame = 3 Query: 3 LLVSTALILLSERLG-PWMTVCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGTAVTLVDPATFMPIAKGLLYVSTVLTVTSGSGYLRAAWPALMGKTE 362 L+V+TAL+L+++RL P +TV +AII+CRE+G+SALREWMA G R+TV VG GK+KTATQM+A+S+LL ++P A + + GLL S VLTV S GY++AAWPAL GK + Sbjct: 227 LMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALTGKAK 347
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Match: A0A7S2V0D2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D2_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.840e-25 Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 3 Query: 3 LLVSTALILLSERLGPWMT-VCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGTAVTLVDPATFM-PIAKGLLYVSTVLTVTSGSGYLRAAWPALMGK 356 L+V++AL+LL+ G W+ V +AIIL RE+ +SALREWMA G R V+VG AGK KTA QM+++ +LLL + G L P + + P A LLY+STVLTVTSG GYL+AAWPAL GK Sbjct: 98 LMVASALVLLAGSEGGWVVAVPAAIILAREITVSALREWMAGRGERSKVQVGMAGKVKTACQMVSLILLLLAQKGADCPL--PVSLLHPAALALLYLSTVLTVTSGWGYLQAAWPALSGK 215
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Match: A0A7S2EJE7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJE7_TRICV) HSP 1 Score: 110 bits (274), Expect = 3.330e-24 Identity = 67/124 (54.03%), Postives = 87/124 (70.16%), Query Frame = 3 Query: 3 LLVSTALILLSERLGPWMTVCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLE-PGTAVTLVDPATFMPIA------KGLLYVSTVLTVTSGSGYLRAAWPALMG 353 L+VSTALILL+ R GP + V +++IL RE+ +SALREWMAQ GLR++VKVG GK KTA M+A+++LLL+ PG V+ A F +A LLY+S ++TVTSGS Y RAA P LMG Sbjct: 106 LMVSTALILLAGRHGPAVAVPASVILAREIAVSALREWMAQRGLRDSVKVGFQGKVKTAATMVALTLLLLVPVPG-----VEGAKFAALAGLQQPGMALLYLSALVTVTSGSVYFRAAAPVLMG 224
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Match: A0A7S2UZN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN3_9STRA) HSP 1 Score: 112 bits (280), Expect = 4.210e-24 Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 3 Query: 3 LLVSTALILLSERLGPWMT-VCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGTAVTLVDPATFM-PIAKGLLYVSTVLTVTSGSGYLRAAWPALMGK 356 L+V++AL+LL+ G W+ V +AIIL RE+ +SALREWMA G R V+VG AGK KTA QM+++ +LLL + G L P + + P A LLY+STVLTVTSG GYL+AAWPAL GK Sbjct: 211 LMVASALVLLAGSEGGWVVAVPAAIILAREITVSALREWMAGRGERSKVQVGMAGKVKTACQMVSLILLLLAQKGADCPL--PVSLLHPAALALLYLSTVLTVTSGWGYLQAAWPALSGK 328
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Match: A0A7S2VXV2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VXV2_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.120e-22 Identity = 65/116 (56.03%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 3 LLVSTALILLSERLGPWMTVCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGTAVTLVDPATFMPIAKGLLYVSTVLTVTSGSGYLRAAWPALM 350 L VST LILL+ MTVC+AIIL RE+ +SALREWMAQ GLRE+VKVG GK KTA M+A+++LL L + T GLLY ST+LTVTSG+ Y RAA P LM Sbjct: 201 LAVSTGLILLAGNNNKIMTVCTAIILAREIAVSALREWMAQRGLRESVKVGWQGKCKTAFTMMALTVLLALPKEISSTAKVWPWIQIAGMGLLYTSTILTVTSGTVYFRAAAPILM 316
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Match: A0A7S4CDP8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CDP8_9EUGL) HSP 1 Score: 107 bits (268), Expect = 1.620e-22 Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 3 Query: 3 LLVSTALILLSERLGPWMTVCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGTAVTLVDPATFMPIAKGLLYVSTVLTVTSGSGYLRAAWPALM 350 L+V+ AL+LL+ R G + V +AIIL RE+ +SALREWMA+ G+R V+VG AGK KT QMIAI++LLL+ G LV + + G+LY++ +LTV SG GY +AAWP LM Sbjct: 210 LMVAAALVLLAGRFGRVVAVPAAIILVREVAVSALREWMAEQGVRNVVQVGFAGKCKTTLQMIAIALLLLVPTGKGSALV----LLHVGFGVLYLAALLTVLSGLGYFQAAWPYLM 321
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Match: A0A7S2U1A6_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U1A6_9EUKA) HSP 1 Score: 106 bits (265), Expect = 2.010e-22 Identity = 59/122 (48.36%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 3 LLVSTALILLSERLGPWMTVCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGTAVTLVDPATFMPIAKGLLYVSTVLTVTSGSGYLRAAWPALMGKTE*T 368 L+V+TAL+LL+ GP + V ++ILCRE+G+SALREWMA+ G R +V VG +GK KTA QM+A++ LLL ++ +L+ ++ LLY++T+LTVTSG Y +AAWP L G + T Sbjct: 156 LMVATALVLLAGANGPIVAVPCSVILCREIGVSALREWMAERGKRGSVAVGWSGKVKTACQMVALTGLLLSRSSSSSSLL---LLQNLSMTLLYIATLLTVTSGLEYFKAAWPTLSGSHQRT 274
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Match: A0A7S4R2Q1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R2Q1_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.610e-22 Identity = 62/121 (51.24%), Postives = 81/121 (66.94%), Query Frame = 3 Query: 3 LLVSTALILLSERLGPWMTVCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGTAVTLVDPATFMPI---AKGLLYVSTVLTVTSGSGYLRAAWPALMGK 356 L+VSTAL++L+ G + V S+IIL RE+ +SALREWMA GLR+TVKVG GK KTA M+A++MLLL+ A + T + LLY+S ++T+TSGS Y RAA P LMGK Sbjct: 182 LMVSTALVILAGSYGSIVAVPSSIILAREIAVSALREWMASKGLRDTVKVGYQGKVKTAATMVALTMLLLVPQKNAGATLWAETLGKLYDPGMALLYLSALVTITSGSVYFRAAAPVLMGK 302 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6831.15591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6831.15591.1 >prot_L-elsbetiae_contig6831.15591.1 ID=prot_L-elsbetiae_contig6831.15591.1|Name=mRNA_L-elsbetiae_contig6831.15591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp MTVCSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMback to top mRNA from alignment at L-elsbetiae_contig6831:1435..4672+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6831.15591.1 ID=mRNA_L-elsbetiae_contig6831.15591.1|Name=mRNA_L-elsbetiae_contig6831.15591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3238bp|location=Sequence derived from alignment at L-elsbetiae_contig6831:1435..4672+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6831:1435..4672+ >mRNA_L-elsbetiae_contig6831.15591.1 ID=mRNA_L-elsbetiae_contig6831.15591.1|Name=mRNA_L-elsbetiae_contig6831.15591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=624bp|location=Sequence derived from alignment at L-elsbetiae_contig6831:1435..4672+ (Laminarionema elsbetiae ELsaHSoW15)back to top |