mRNA_L-elsbetiae_contig6824.15583.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Match: D8LFV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV3_ECTSI) HSP 1 Score: 159 bits (403), Expect = 1.990e-45 Identity = 79/98 (80.61%), Postives = 86/98 (87.76%), Query Frame = 2 Query: 2 GRDRVSYMKPVGQKHVLVAGTGGEPLKVDKDVAVAREHFGLSASYSAMSPLVLYKGYTKRFLDGKIDARQQEEVIQRGFEELIQENDFVVVEGTGHTG 295 G RVSYMKPVGQKHVLV G GE LKVDKDVAVA+E+FGLSA Y+AMSPLVLYKGYTK FLDGK+D R+Q+ VIQ GFEELI+ NDFVVVEGTGHTG Sbjct: 48 GPTRVSYMKPVGQKHVLVTGKDGEDLKVDKDVAVAKEYFGLSAPYNAMSPLVLYKGYTKDFLDGKMDVREQKRVIQDGFEELIRSNDFVVVEGTGHTG 145
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Match: A0A6H5JE31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE31_9PHAE) HSP 1 Score: 140 bits (354), Expect = 4.660e-38 Identity = 73/98 (74.49%), Postives = 79/98 (80.61%), Query Frame = 2 Query: 2 GRDRVSYMKPVGQKHVLVAGTGGEPLKVDKDVAVAREHFGLSASYSAMSPLVLYKGYTKRFLDGKIDARQQEEVIQRGFEELIQENDFVVVEGTGHTG 295 G RVSYMKPVGQKHVLV DKDVAV RE+FGLSA Y+AMSPLVLYKGYTK FLDGK+D R+Q+ VIQ GFEELI+ NDFVVVEGTGHTG Sbjct: 96 GPTRVSYMKPVGQKHVLV----------DKDVAVVREYFGLSAPYNAMSPLVLYKGYTKDFLDGKMDVREQKRVIQDGFEELIRSNDFVVVEGTGHTG 183
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Match: A0A836C8E0_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E0_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.300e-28 Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 2 Query: 2 GRDRVSYMKPVGQKHVLVAGTGGEPLKVDKDVAVAREHFGLSASYSAMSPLVLYKGYTKRFLDGKIDARQQEEVIQRGFEELIQENDFVVVEGTGHTG 295 G + V Y+KPVGQK V V GE L+VDKDV VAREH+GL+ +Y MSPLVL KGYT+R+LDG++D +Q IQ+ F+ ++ + V+VEGTGHTG Sbjct: 27 GVENVGYIKPVGQKWVPVPDDSGEVLQVDKDVKVAREHWGLTCNYRDMSPLVLDKGYTRRYLDGQVDISKQFAAIQQAFDNMLSQKQVVIVEGTGHTG 124
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Match: A0A7S3S2W9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3S2W9_9SPIT) HSP 1 Score: 97.4 bits (241), Expect = 1.470e-23 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 2 Query: 11 RVSYMKPVGQKHVLVAGTGGEPLKVDKDVAVAREHFGLS-ASYSAMSPLVLYKGYTKRFLDGKIDARQQEEVIQRGFEELIQENDFVVVEGTGHTG 295 +V ++KPVGQ+HV V + G+ ++VDKDV V +E+FGL SY MSP+++ KGYTK F+DGK+D + Q + I+ F E+ + ++ +VEGTGH G Sbjct: 33 KVGFIKPVGQQHVPVRTSDGKEIRVDKDVVVMKEYFGLDHMSYEHMSPVLVPKGYTKDFIDGKVDRQSQVDRIRESFAEIEKRSEVTLVEGTGHVG 128
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Match: A0A7R9U109_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U109_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.650e-23 Identity = 48/96 (50.00%), Postives = 69/96 (71.88%), Query Frame = 2 Query: 8 DRVSYMKPVGQKHVLVAGTGGEPLKVDKDVAVAREHFGLSASYSAMSPLVLYKGYTKRFLDGKIDARQQEEVIQRGFEELIQENDFVVVEGTGHTG 295 + V++ KPVGQ+H+ + G +KVDKDV V +EHFGL+ Y MSP+++ +GYT+ F+DGK + QE+ I R FE L +++D VV+EGTGHTG Sbjct: 51 ESVAFGKPVGQQHLQIDG-----MKVDKDVQVLKEHFGLTCKYQDMSPVLVPRGYTRDFIDGKRSEKDQEDAILRSFEALSRDSDVVVMEGTGHTG 141
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Match: A0A0W8CTD8_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CTD8_PHYNI) HSP 1 Score: 97.8 bits (242), Expect = 5.190e-23 Identity = 51/97 (52.58%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 8 DRVSYMKPVGQKHVLVAGTGGEPLKVDKDVAVAREHFGL-SASYSAMSPLVLYKGYTKRFLDGKIDARQQEEVIQRGFEELIQENDFVVVEGTGHTG 295 DR+ ++KPVGQ+ V V G L+VDKDVAVA+E F L + +Y+ MSP+V+ GYTKRFLDG I Q + I+ F+ + + N+F VVEGTGHTG Sbjct: 40 DRIGFLKPVGQESVAVEGGS---LRVDKDVAVAKEVFKLDTCNYADMSPVVIMPGYTKRFLDGHITVESQLDKIRTSFKRITEANEFTVVEGTGHTG 133
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Match: A0A836CAU9_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU9_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.060e-22 Identity = 47/96 (48.96%), Postives = 68/96 (70.83%), Query Frame = 2 Query: 8 DRVSYMKPVGQKHVLVAGTGGEPLKVDKDVAVAREHFGLSASYSAMSPLVLYKGYTKRFLDGKIDARQQEEVIQRGFEELIQENDFVVVEGTGHTG 295 + V ++KPVGQ+H +V G L+VDKDV + +E FGL +Y MSP+V+ +GYT+ ++DGKI + Q + I R FE + ++ND VV+EGTGHTG Sbjct: 32 ENVGFVKPVGQQHEVVGSAG---LRVDKDVTLMKEFFGLKGNYEDMSPVVVPRGYTRDYIDGKICEQGQLDSIHRSFENIQRQNDIVVLEGTGHTG 124
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Match: A0A7R9U612_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U612_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.240e-22 Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 11 RVSYMKPVGQKHVLVAGTGGEPLKVDKDVAVAREHFGLSASYSAMSPLVLYKGYTKRFLDGKI---DARQQEEVIQRGFEELIQENDFVVVEGTGHTG 295 RV YMKP+GQK + V G G P++VDKDV VAR+HF + ++ MSP+V+ +G TK+FLDG+ + R + IQ F + DF VVEGTGH G Sbjct: 19 RVGYMKPIGQKWIPVRGPSGAPMRVDKDVVVARDHFNMRLDFADMSPVVVGRGETKKFLDGRKAEWEDRALGQTIQSAFRRISGACDFTVVEGTGHCG 116
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Match: H3GRB5_PHYRM (DRTGG domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3GRB5_PHYRM) HSP 1 Score: 97.8 bits (242), Expect = 4.100e-22 Identity = 51/97 (52.58%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 8 DRVSYMKPVGQKHVLVAGTGGEPLKVDKDVAVAREHFGLSA-SYSAMSPLVLYKGYTKRFLDGKIDARQQEEVIQRGFEELIQENDFVVVEGTGHTG 295 DR+ ++KPVGQ+ V V G L+VDKDVAVA+E F L+ Y+ MSP+V+ GYTKRFLDG I Q + I+ F+++ + N+F VVEGTGHTG Sbjct: 32 DRIGFLKPVGQESVAVEGGS---LRVDKDVAVAKEVFKLATCDYADMSPVVIMPGYTKRFLDGHITVESQLDKIRSSFKKIAEANEFTVVEGTGHTG 125
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Match: D0N8P2_PHYIT (DRTGG domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0N8P2_PHYIT) HSP 1 Score: 97.8 bits (242), Expect = 4.410e-22 Identity = 51/97 (52.58%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 8 DRVSYMKPVGQKHVLVAGTGGEPLKVDKDVAVAREHFGL-SASYSAMSPLVLYKGYTKRFLDGKIDARQQEEVIQRGFEELIQENDFVVVEGTGHTG 295 DR+ ++KPVGQ+ V V G L+VDKDVAVA+E F L + +Y+ MSP+V+ GYTKRFLDG I Q + I+ F+ + + N+F VVEGTGHTG Sbjct: 39 DRIGFLKPVGQESVAVEGGS---LRVDKDVAVAKEVFKLDTCNYADMSPVVIMPGYTKRFLDGHITVESQLDKIRTSFKRITEANEFTVVEGTGHTG 132 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6824.15583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6824.15583.1 >prot_L-elsbetiae_contig6824.15583.1 ID=prot_L-elsbetiae_contig6824.15583.1|Name=mRNA_L-elsbetiae_contig6824.15583.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp RAGPRELHETRRAEARARGRDGRRTPQGRQGRSCCQGALRPLGFLQRDVAback to top mRNA from alignment at L-elsbetiae_contig6824:1460..2580- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6824.15583.1 ID=mRNA_L-elsbetiae_contig6824.15583.1|Name=mRNA_L-elsbetiae_contig6824.15583.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1121bp|location=Sequence derived from alignment at L-elsbetiae_contig6824:1460..2580- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6824:1460..2580- >mRNA_L-elsbetiae_contig6824.15583.1 ID=mRNA_L-elsbetiae_contig6824.15583.1|Name=mRNA_L-elsbetiae_contig6824.15583.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=594bp|location=Sequence derived from alignment at L-elsbetiae_contig6824:1460..2580- (Laminarionema elsbetiae ELsaHSoW15)back to top |