mRNA_L-elsbetiae_contig6807.15570.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: D7G1U0_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U0_ECTSI) HSP 1 Score: 218 bits (554), Expect = 4.710e-66 Identity = 110/114 (96.49%), Postives = 112/114 (98.25%), Query Frame = 1 Query: 274 MASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQ 615 MASKVEGQESQMVTFEL+PGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGD + KVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQ Sbjct: 1 MASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQ 114
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A1Z5KFL0_FISSO (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFL0_FISSO) HSP 1 Score: 152 bits (383), Expect = 1.510e-41 Identity = 67/123 (54.47%), Postives = 98/123 (79.67%), Query Frame = 1 Query: 250 LAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 618 + +P+DFD+A+K+EG ESQ+VT EL P QV+RAE+G ++++ +G+EM+T TGGG S+ FRR++TGQN F++DY G+ +V LGTD PSKI+RL + YGG+++CQ+GA L SHTID+Q+ Sbjct: 44 VGEPIDFDLAAKIEGNESQIVTIELRPNQVLRAESGAMMYLTEGVEMNTTTGGGLSAGFRRMMTGQNFFISDYTYTGNTVGRVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDVQM 166
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A6U0KGL8_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0KGL8_9STRA) HSP 1 Score: 148 bits (373), Expect = 7.380e-41 Identity = 69/129 (53.49%), Postives = 99/129 (76.74%), Query Frame = 1 Query: 238 DHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGD--RTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 618 D + P+DFD+ASK+EG ESQ+VT L+PGQV+RAE+G+++FM DGI M+T TGGG S+ F+R++TGQN+F++D+ G+ T + LGTD PSKIVRL + YGG+++ Q+GA L SHT+DI++ Sbjct: 94 DGVVATHPIDFDVASKIEGNESQIVTVALEPGQVLRAESGSMMFMTDGITMETTTGGGMSAGFKRMLTGQNVFISDFRYEGEPATTGLIALGTDFPSKIVRLNIKQYGGKIVAQKGALLCASHTVDIEM 222
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S3L1B2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1B2_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.520e-40 Identity = 69/120 (57.50%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 256 KPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDR-TSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDI 612 +P+DFD+ SK+EG ESQ+VT L+PGQV+RAE+G +++M G+EM+T TGGG SS F R++TGQN F++DY +G+ T +V LGTD PSKI+RL + YGG+++CQ+GA L SHTIDI Sbjct: 70 RPIDFDIQSKIEGNESQIVTITLEPGQVLRAESGAMMYMTAGVEMNTTTGGGLSSGFSRMLTGQNFFISDYSYQGETGTGQVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDI 189
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S1VUA2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VUA2_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.900e-40 Identity = 78/156 (50.00%), Postives = 113/156 (72.44%), Query Frame = 1 Query: 154 RRSRSKPKPSSGSDITAGGSNAPAVADPDHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYV-NRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 618 RR S ++ + +T +A A+ D ++ +P++FD+A+K+EG ESQ+VT L+P QV+RAE+G ++FM DG+EM+T TGGG S+ F+R++TGQN F++DYV NR +V LGTD PSKIVRL +A YGG++ CQ+GA L SHTIDI++ Sbjct: 85 RRYYSNSPTNNSNSLTPQAQDAGALTSSDGVS-GRPINFDVAAKIEGNESQIVTVTLEPNQVLRAESGAMMFMTDGVEMNTTTGGGLSTGFQRMLTGQNFFISDYVYNRPTGKGQVALGTDFPSKIVRLNVAEYGGKITCQKGALLCASHTIDIEM 239
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S4QQK5_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQK5_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.000e-39 Identity = 69/129 (53.49%), Postives = 101/129 (78.29%), Query Frame = 1 Query: 238 DHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDRTSK--VGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 618 D + P++FD+ASK+EG+ESQ+VT ++PGQV+RAE+G L++M DGIEM+T +GGG S+ F+R++TGQN+F++DY G+ ++ V LGTD PSKI+RL YGG+++CQ+GA L SHTIDI++ Sbjct: 98 DGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKRLLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIEM 226
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S2WLF3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLF3_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.070e-39 Identity = 66/130 (50.77%), Postives = 97/130 (74.62%), Query Frame = 1 Query: 226 VADPDHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQ 615 V D + +DF+ AS++EG +SQ+VT L+PGQV+RAE+G +++M DG+EM+T+TGGG + F+R +TGQN+F++DY +GDR V LGTD PSKI+RL L + G+++CQ+GA L SHT+DI+ Sbjct: 37 VVSSDGVVATHAIDFNTASRIEGSDSQIVTVRLEPGQVLRAESGGMMYMTDGVEMNTSTGGGVGAGFKRFLTGQNVFISDYTYKGDRFGIVALGTDFPSKIMRLSLPEWDGKIVCQKGALLCASHTVDIE 166
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S4QQY9_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQY9_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.380e-39 Identity = 69/129 (53.49%), Postives = 101/129 (78.29%), Query Frame = 1 Query: 238 DHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDRTSK--VGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 618 D + P++FD+ASK+EG+ESQ+VT ++PGQV+RAE+G L++M DGIEM+T +GGG S+ F+R++TGQN+F++DY G+ ++ V LGTD PSKI+RL YGG+++CQ+GA L SHTIDI++ Sbjct: 98 DGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKRLLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIEM 226
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S3L252_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L252_9STRA) HSP 1 Score: 146 bits (368), Expect = 4.620e-39 Identity = 69/120 (57.50%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 256 KPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDR-TSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDI 612 +P+DFD+ SK+EG ESQ+VT L+PGQV+RAE+G +++M G+EM+T TGGG SS F R++TGQN F++DY +G+ T +V LGTD PSKI+RL + YGG+++CQ+GA L SHTIDI Sbjct: 70 RPIDFDIQSKIEGNESQIVTITLEPGQVLRAESGAMMYMTAGVEMNTTTGGGLSSGFSRMLTGQNFFISDYSYQGETGTGQVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDI 189
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S4J9C2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J9C2_9STRA) HSP 1 Score: 147 bits (370), Expect = 5.220e-39 Identity = 92/215 (42.79%), Postives = 133/215 (61.86%), Query Frame = 1 Query: 4 LTSRGVTSTARRLALLRGSSGRLAVPKHSGNLYP---TASALVA---PLATSTSAVRRSRSKPKPSSGSDITAGGSNAP--AVADPDHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGD--RTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 618 L+ G S + LA R +G + H L+P TASA + P T RR P S + + GG N P A A D + +A P+DFD++SKVEG+ESQ+VT + PGQ++RAE+G +++M G+ M+T TGGG S+ F+R++TGQN+F++DY G+ T V LGTD PSKI+RL + YGG+++ Q+GA L +HTIDI++ Sbjct: 14 LSQGGACSGSANLAR-RSLAGSASSTSHLSVLHPPLLTASAQLGCFDPARTKEPFQRRRYFSSTPDSDTPVAVGGENLPEGAKASSDGV-VAVPIDFDVSSKVEGKESQIVTVAIKPGQILRAESGAMMYMTQGVSMNTTTGGGLSAGFKRMLTGQNVFISDYSYEGEPGTTGLVALGTDFPSKIIRLNVDQYGGKIVAQKGALLCATHTIDIEM 226 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6807.15570.1 >prot_L-elsbetiae_contig6807.15570.1 ID=prot_L-elsbetiae_contig6807.15570.1|Name=mRNA_L-elsbetiae_contig6807.15570.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp MLTSRGVTSTARRLALLRGSSGRLAVPKHSGNLYPTASALVAPLATSTSAback to top mRNA from alignment at L-elsbetiae_contig6807:8458..10335+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6807.15570.1 ID=mRNA_L-elsbetiae_contig6807.15570.1|Name=mRNA_L-elsbetiae_contig6807.15570.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1878bp|location=Sequence derived from alignment at L-elsbetiae_contig6807:8458..10335+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6807:8458..10335+ >mRNA_L-elsbetiae_contig6807.15570.1 ID=mRNA_L-elsbetiae_contig6807.15570.1|Name=mRNA_L-elsbetiae_contig6807.15570.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig6807:8458..10335+ (Laminarionema elsbetiae ELsaHSoW15)back to top |