mRNA_L-elsbetiae_contig6802.15566.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6802.15566.1
Unique NamemRNA_L-elsbetiae_contig6802.15566.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 4.440e-85
Identity = 286/489 (58.49%), Postives = 321/489 (65.64%), Query Frame = 1
Query:    1 MPGFEDRASILQGAGDMIFKLVCDRSTPEQWAEWLRAPLEHATGTANYDLVQKLLKAGANGGAGWKGCHGKTLLHAAAEGGDGRVVTALIRAGAGADKNAKDPDTGRXXXXXXXXXXXXXXXXXXXXAAADVNILDSKKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAIAVREDRVSTVEVLLAGGADANFHIDTECETVLHHTARLEKPASIPALIEAGADIEARDTDGCTPLYLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEILPDVAEASEGNRLRIQRLTKLLAHAPQDRAWRRRGFVVMCRAHQDRLRLAVETPDNAAEAIGQQPQERPSRRPRMGQVKVEVQVGDAHGAGXXXXXXXXXXXXXVHHTERRAGGEGVSGGFDGVAAWLMAVTDGGVFRNIVGFL 1467
            MPG+E+RASILQ  GD IFKLVCDR+TPEQWAEWLRAPLEHA GT N DLV KLL AGAN GAGW+GCHGKTLLHAAAEGG+  V+T+L RAGAG D  AK  DTG                     A ADVN LD+  D    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             L +AVR D V+TV+VLL+ GAD +F        +LH  A+  + A+IPAL EAG +IE R + G TPL  AA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    S ++  +AE+SE  R   +R++KLLA APQDRAWRRRGF+V+CRAH DR+RLAV+ P  AAEA      E    RPR                 XXXXXXXXXX       E  A  EG   GFDG +AW+MA+T+  +FR IVGFL
Sbjct:    1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLALGEKGVDLNCLNSKGETPLRLAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLRYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQGMAESSEARRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVKIPAAAAEAT-----EGLQERPRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGARARIE--AAREGTVCGFDGFSAWMMALTEENLFRKIVGFL 482          
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 9.090e-57
Identity = 251/451 (55.65%), Postives = 287/451 (63.64%), Query Frame = 1
Query:  133 TANYDLVQKLLKAGANGGAGWKGCHGKTLLHAAAEGGDGRVVTALIRAGAGADKNAKDPDTGRXXXXXXXXXXXXXXXXXXXXAAADVNILDSKKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAIAVREDRVSTVEVLLAGGADAN--FHIDTECETVLHHTARLEKPASIPALIEAGADIEARDT-DGCTPLYLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEILPDVAEASEGNRLRIQRLTKLLAHAPQDRAWRRRGFVVMCRAHQDRLRLAVETPDNAAEAIGQQPQE--RPSRRPRMGQV-KVEVQVGDAHGAGXXXXXXXXXXXXXVHHTERRAGGEGVSGGFDGVAAWLMAVTDGGVFRNIVGFL 1467
            TAN +LV KLL+AGA+GG GW+GCH KTLLHAAA+GGD  VV+ L RAGA AD  A+ P TG                     A ADVN+LD+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        L  AVR+D +STV VLLA GA+AN  F       TVLH  A  +   +IP LIEAGA +++ D  DG        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              SE +P +AEA++ +  R++RL+KLL  APQDRAWRRRGF+ +CRAH DRLRL VE P  A EA G+QPQE  RPSRR R GQ  KV+V+V DAHG+                    R  G+G  GGF+  A WL+A+ +  VFR IVGFL
Sbjct:   21 TANNELVSKLLRAGADGGVGWRGCHDKTLLHAAAKGGDALVVSLLQRAGARADFEAEAPGTGHTPLHLAVLGGNAATAKALTMAEADVNVLDAMNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDIVVALAHKGVDLEGVAEPP---LLRAVRQDHISTVRVLLAVGANANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASVQSSDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGSTP--SEFIPAIAEAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDAHGSVSGEGSSRAGIV--------RVDGKGDGGGFEFAAGWLVALAEEDVFRKIVGFL 458          
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 7.850e-42
Identity = 83/140 (59.29%), Postives = 96/140 (68.57%), Query Frame = 1
Query:    1 MPGFEDRASILQGAGDMIFKLVCDRSTPEQWAEWLRAPLEHATGTANYDLVQKLLKAGANGGAGWKGCHGKTLLHAAAEGGDGRVVTALIRAGAGADKNAKDPDTGRXXXXXXXXXXXXXXXXXXXXAAADVNILDSKKD 420
            +PG+E+R+SILQ  GD  FKLV DR+TP+QWAEWLRAPLEHA  T N DLV KLL AGANGGAGW+GCHGKTLLHAAAEGG+ +V+T L  AGAG D  AK  DTG                     A A+VN+LD+  D
Sbjct:   43 IPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATND 182          
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Match: A0A6H5K8L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8L4_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 2.890e-41
Identity = 158/279 (56.63%), Postives = 182/279 (65.23%), Query Frame = 1
Query:  634 AVREDRVSTVEVLLAGGADANFHIDTECETVLHHTARLEKPASIPALIEAGADIEARDTDGCTPLYLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEILPDVAEASEGNRLRIQRLTKLLAHAPQDRAWRRRGFVVMCRAHQDRLRLAVETPDNAAEAIGQQPQERPSRRPRMGQV-KVEVQVGDAHGAGXXXXXXXXXXXXXVHHTERRAGGEGVSGGFDGVAAWLMAVTDGGVFRNIVGFL 1467
            A+ +DR+ST+ VLLA GAD       + ETVL   A+L K A+IPAL EAGADIE+ D  G TPLY +A         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       S  I     +A EG+R R++R +K L  APQDRAWRRRGF+V+CRAH DR+RL VE P  AAEA  QQ  ERPS R R GQ  KV+V+VGDAHG+              V     RA   G   GF+  A WL+A+ +  VFR IVGFL
Sbjct:  103 AICQDRMSTLRVLLAEGADVTHRRYYDSETVLQLAAKLNKVAAIPALTEAGADIESPDAFGRTPLYSSAVHGSFSSMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSQGKTPSFYIPAIAEDADEGHRKRLERRSKRLTRAPQDRAWRRRGFLVLCRAHPDRVRLMVEIPKTAAEASVQQLLERPSCRARKGQQSKVDVKVGDAHGSMRGAGADTSARARIV-----RADDTGDGDGFEFAAGWLVALAEEDVFRKIVGFL 376          
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 1.490e-36
Identity = 79/136 (58.09%), Postives = 85/136 (62.50%), Query Frame = 1
Query:   13 EDRASILQGAGDMIFKLVCDRSTPEQWAEWLRAPLEHATGTANYDLVQKLLKAGANGGAGWKGCHGKTLLHAAAEGGDGRVVTALIRAGAGADKNAKDPDTGRXXXXXXXXXXXXXXXXXXXXAAADVNILDSKKD 420
            EDR  IL  A DMIFKL+CDR+T EQW EWLRAPLEHA GTAN DLV+KLLKAGA+G AGW+GC   TLLHAA       VVTALIRAGAG D  AK P TG                     A ADVN +D   D
Sbjct:    9 EDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVDHNTD 144          
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.270e-36
Identity = 146/511 (28.57%), Postives = 196/511 (38.36%), Query Frame = 1
Query:    1 MPGFEDRASILQGAGDMIFKLVCDRSTPEQWAEWLRAPLEHATGT-ANYDLVQKL-------LKAGANGGAGWKGCHGKTLLHAAAEGG--DGRVVTALIRAGAGADKNAKDPDTGRXXXXXXXXXXXXXXXXXXXXAAADVNILDSKKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAIAVREDRVSTVEVLLAGGADANFHI------------DTECETVLHHTARLEKPASIPALIEAGADIEARDTDGCTPLYLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEILPDVAEASEGNRLRIQRLTKLLAHAPQDRAWRRRGFVVMCRAHQDRLRLAVETPDNAAEAIGQQPQERPSRRPRMGQVKVEVQVGDAHGAGXXXXXXXXXXXXXVHHTERRAGGEGVSGGFDGVAAWLMAVTDGGVFRNIVGFL 1467
            MPG+++R+SILQ  GD IFKLVCD +TPEQWAEWLRAPLEHA  T A  D+  K        L     GG   K    K L+ A A+G   + RV   L+ +GA   +   +   G                        D+N L++K++                                                                    L IA  E++ + + VL   GAD    +            + E  T L          +   L+  G D  A D++G T +++                                                                  ++  +AEA    R  ++RL++LLA APQDRAWRRRGF+V+ R H DR+RLAVE P  AA+A  +QPQ+RP RR   GQV+V+   G   G GX              H       EG   GF GV+AW+MA+T+ GVFR IVGFL
Sbjct:    1 MPGYKERSSILQDLGDTIFKLVCDWATPEQWAEWLRAPLEHAAATGAGGDIKAKAPHTWHTPLDLTVTGG---KEAAAKALIMAGADGHMWEHRVAKDLLLSGANPIQAGSN---GNFPIHLAACHGLDEVVLAVVEKGIDLNCLNNKREIPLLLAL-------------------------------------------------------------LRIAACENKAAAIRVLFEAGADIEARLTLFQLGAKVNSKENERITSLSSACSFGNHDAAGLLLSWGGDENAMDSEGETVVFM------------------------------------------------------------------VMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADAT-EQPQQRPRRRASTGQVEVD---GTNGGGGXTGASSGVRAGIEAVH-------EGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367          
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 1.760e-35
Identity = 93/137 (67.88%), Postives = 110/137 (80.29%), Query Frame = 1
Query:   10 FEDRASILQGAGDMIFKLVCDRSTPEQWAEWLRAPLEHATGTANYDLVQKLLKAGANGGAGWKGCHGKTLLHAAAEGGDGRVVTALIRAGAGADKNAKDPDTGRXXXXXXXXXXXXXXXXXXXXAAADVNILDSKKD 420
            +EDRA+IL+G+ D  F+LVCDR+TPEQWAEWLRAPLEHA  TA++DLV+KLL AGANG  GW GC GKTLLHAAAEGG+ +V+ AL+RAGA  DK+       R  XXXXXXXXXXXXXXXXXX  ADV+ LD+ +D
Sbjct:    7 YEDRANILRGSEDTTFRLVCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGANGSTGWVGCDGKTLLHAAAEGGNAQVIMALLRAGAAGDKDTAASYKERTPXXXXXXXXXXXXXXXXXXXXADVHSLDTDQD 143          
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 2.450e-35
Identity = 72/97 (74.23%), Postives = 80/97 (82.47%), Query Frame = 1
Query:   13 EDRASILQGAGDMIFKLVCDRSTPEQWAEWLRAPLEHATGTANYDLVQKLLKAGANGGAGWKGCHGKTLLHAAAEGGDGRVVTALIRAGAGADKNAK 303
            EDRA  L  A  +IFKL+CDR+T EQWAEWLRAPLEHA GTAN DLV+KLLKAGA+G AGW+GC  KTLLHAAAEGG+  VVTAL+RAGAG D  AK
Sbjct:    9 EDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAK 105          
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 1.260e-34
Identity = 185/396 (46.72%), Postives = 218/396 (55.05%), Query Frame = 1
Query:    1 MPGFEDRASILQGAGDMIFKLVCDRSTPEQWAEWLRAPLEHATGTANYDLVQKLLKAGANGGAGWKGCHGKTLLHAAAEGGDGRVVTALIRAGAGADKNAKDPDTGRXXXXXXXXXXXXXXXXXXXXAAADVNILDSKKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAIAVREDRVSTVEVLLAGGADANFHIDTECETVLH-------HTARLEKPASIPALIEAGADIEAR-DTDGCTPLYLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEILPDVAEASEGNRLRIQRLTKLLAHAPQDRAWRRRGFVVMCRAH 1164
            M   +DR S L G GDMI  LVCD +TP QW +WLR PLEHA GT N  LV+KLLK GAN  AGW+GC G+TL+HA AEGG  +V++ L RAGAG   N + P +G                     A ADVN LD+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL  A+    +STV V L  G      ++   +T +         T  +   A++ AL++ GAD+ A+   +G T L+ A                                                              +S ++P + EA E N   I RLTKLL  A QDR WRRRG +VMCRAH
Sbjct:    1 MSTHQDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHALDAGHISTVNVSLGWGC---LWLEPTSKTCIAGRPPLCVSTFSISYFAAMLALLKLGADLHAKCPHNGMTALHTACHVVNPDAADLLLRWGADETAVDWNGAT----------------------------------TSAVIPRIDEAPEENGPAILRLTKLLKFADQDRTWRRRGLLVMCRAH 359          
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 2.780e-33
Identity = 182/434 (41.94%), Postives = 209/434 (48.16%), Query Frame = 1
Query:   13 EDRASILQGAGDMIFKLVCDRSTPEQWAEWLRAPLEHATGTANYDLVQKLLKAGANGGAGWKGCHGKTLLHAAAEGG-DGRVVTALIRAGA-----------------------------------GADKNAKDPDTGRXXXXXXXXXXXXXXXXXXXXAAADVN------------ILDSKKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAI--AVREDRVSTVEVLLAGGADANFHIDTE-----------CETVLHHTARLEKPASIPALIEAGADIEARDTDGCTPLYLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEILPDVAEASEGNRLRIQRLTKLLAHAPQDRAWR 1131
            EDRA IL  A DMIF+L+CDR+T EQWAEWLRAPLEHA GTAN DLV+KLLKAGANG AG +GC   TLLHAAAEGG +  VVTALI+AGA                                   GAD NA D + G                     AA  VN             LD +  +                                                                   L +  A R+ R   V  L   GAD +  +D E            +T LH   +  K  +IPA IEAGADIEAR + G +PL+  A         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     S ++P +A+A E +R R++RLT LL  APQDRAWR
Sbjct:   11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRN-GDTTLLDLVIGCRGFARDCPIHAAVLVNSWLLGKICCIDETLDQENRSKGGVSWVGAQHPSSITLGHSPDHAYSPNTDRCMERANALSYVLHILGLIPDIQTILSDSLRFCRYTCLYLEHAARQGRHDVVHALAYKGADLDA-LDDEGMTPISLGTNLSKTALHVAVKCNKAGAIPAFIEAGADIEARTSLGRSPLWYVAWKGPCAAMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTTPSALMPVIAQADERDRPRLERLTALLEKAPQDRAWR 442          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6802.15566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2A3_ECTSI4.440e-8558.49Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5KB54_9PHAE9.090e-5755.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHQ7_ECTSI7.850e-4259.29F-box domain and ankyrin repeat protein n=1 Tax=Ec... [more]
A0A6H5K8L4_9PHAE2.890e-4156.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQP2_ECTSI1.490e-3658.09Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JU78_9PHAE2.270e-3628.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPN3_ECTSI1.760e-3567.88Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ecto... [more]
D7FQP1_ECTSI2.450e-3574.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FM65_ECTSI1.260e-3446.72Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5JXY4_9PHAE2.780e-3341.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6802contigL-elsbetiae_contig6802:8022..9491 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score281.2
Seed ortholog evalue9.4e-73
Seed eggNOG ortholog2880.D7G2A3
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size1470
Cds size1470
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816754.0463676-CDS-L-elsbetiae_contig6802:8021..94911622816754.0463676-CDS-L-elsbetiae_contig6802:8021..9491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6802 8022..9491 +
1691683788.1573243-CDS-L-elsbetiae_contig6802:8021..94911691683788.1573243-CDS-L-elsbetiae_contig6802:8021..9491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6802 8022..9491 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6802.15566.1prot_L-elsbetiae_contig6802.15566.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6802 8022..9491 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6802.15566.1

>prot_L-elsbetiae_contig6802.15566.1 ID=prot_L-elsbetiae_contig6802.15566.1|Name=mRNA_L-elsbetiae_contig6802.15566.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=490bp
MPGFEDRASILQGAGDMIFKLVCDRSTPEQWAEWLRAPLEHATGTANYDL
VQKLLKAGANGGAGWKGCHGKTLLHAAAEGGDGRVVTALIRAGAGADKNA
KDPDTGRTPLHLAALGGREAVAKVLIMAAADVNILDSKKDAPLHLAIESD
DAGIAEALLLGGANHAVRGSKGDYPIHLAACHGENEIVRALVQRGANLDR
LNRSKETPLAIAVREDRVSTVEVLLAGGADANFHIDTECETVLHHTARLE
KPASIPALIEAGADIEARDTDGCTPLYLAAGFDSRTAMLALLQLGAIANA
KDNDGGTPLHNACLANHPYAANLLLRWGADETIVDNDGKTPSSEILPDVA
EASEGNRLRIQRLTKLLAHAPQDRAWRRRGFVVMCRAHQDRLRLAVETPD
NAAEAIGQQPQERPSRRPRMGQVKVEVQVGDAHGAGGGGGAGSSSSSSSV
HHTERRAGGEGVSGGFDGVAAWLMAVTDGGVFRNIVGFL*
back to top

mRNA from alignment at L-elsbetiae_contig6802:8022..9491+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6802.15566.1 ID=mRNA_L-elsbetiae_contig6802.15566.1|Name=mRNA_L-elsbetiae_contig6802.15566.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1470bp|location=Sequence derived from alignment at L-elsbetiae_contig6802:8022..9491+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGGGATTCGAAGACCGGGCGAGCATCCTGCAGGGTGCAGGAGACAT GATATTCAAACTGGTGTGCGATAGGTCGACGCCGGAGCAGTGGGCGGAGT GGCTGAGGGCACCGCTGGAGCACGCCACAGGCACTGCCAATTATGATCTG GTGCAGAAGCTACTGAAAGCTGGCGCTAACGGGGGTGCGGGCTGGAAAGG TTGTCACGGTAAGACTCTGTTACACGCGGCTGCTGAGGGCGGAGACGGTC GGGTCGTCACGGCGTTGATCAGAGCCGGCGCCGGAGCGGATAAGAACGCC AAAGATCCTGATACTGGCCGCACTCCACTCCATCTTGCGGCACTCGGCGG GAGGGAGGCTGTTGCGAAGGTGCTGATCATGGCTGCAGCGGATGTGAACA TCCTCGACAGCAAGAAGGACGCCCCGCTGCACTTGGCCATCGAAAGCGAT GATGCTGGCATTGCTGAAGCCCTGTTACTTGGCGGAGCCAACCACGCCGT GAGAGGTTCCAAAGGAGACTACCCCATTCACCTCGCTGCTTGCCACGGTG AGAACGAGATAGTGCGGGCGTTGGTGCAAAGGGGGGCGAACCTGGACCGC CTCAATCGCTCAAAGGAGACCCCCCTCGCTATCGCTGTGCGTGAGGATCG CGTTTCCACCGTGGAAGTTCTCCTGGCCGGAGGTGCCGATGCGAACTTTC ACATAGACACCGAGTGCGAAACCGTCCTACACCACACCGCGCGGCTCGAA AAACCGGCCTCAATTCCAGCACTCATCGAGGCCGGGGCCGACATCGAAGC CAGGGATACCGACGGTTGCACACCGCTCTACCTTGCAGCAGGCTTTGACT CGCGGACGGCTATGCTTGCTCTGCTGCAGCTGGGAGCCATTGCCAACGCG AAAGACAACGACGGAGGCACTCCGCTGCATAACGCGTGCTTAGCTAATCA CCCCTATGCTGCAAACCTGCTGTTACGGTGGGGCGCTGACGAGACCATCG TCGATAACGACGGCAAGACCCCCAGCAGCGAAATACTTCCAGACGTCGCT GAAGCTTCCGAGGGGAACCGCCTGAGAATCCAACGCCTGACGAAGCTGCT GGCGCACGCCCCGCAGGACAGGGCCTGGCGTCGCCGGGGCTTTGTGGTCA TGTGCCGCGCCCACCAAGACAGGTTGCGGCTTGCAGTAGAGACCCCTGAC AACGCAGCTGAGGCTATCGGGCAGCAGCCGCAGGAGCGTCCGAGCCGCCG TCCTAGGATGGGGCAGGTGAAGGTCGAGGTTCAGGTGGGTGACGCACATG GAGCTGGAGGAGGAGGGGGTGCGGGCAGCAGCAGCAGCAGCAGTAGCGTG CACCACACCGAGAGAAGGGCTGGAGGCGAGGGTGTCAGCGGCGGGTTCGA TGGTGTGGCGGCCTGGCTCATGGCGGTGACCGATGGAGGCGTGTTCCGCA ACATCGTGGGGTTCCTTTAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6802:8022..9491+

>mRNA_L-elsbetiae_contig6802.15566.1 ID=mRNA_L-elsbetiae_contig6802.15566.1|Name=mRNA_L-elsbetiae_contig6802.15566.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2940bp|location=Sequence derived from alignment at L-elsbetiae_contig6802:8022..9491+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGGGATTCGAAGACCGGGCGAGCATCCTGCAGGGTGCAGGAGACAT
GATATTCAAACTGGTGTGCGATAGGTCGACGCCGGAGCAGTGGGCGGAGT
GGCTGAGGGCACCGCTGGAGCACGCCACAGGCACTGCCAATTATGATCTG
GTGCAGAAGCTACTGAAAGCTGGCGCTAACGGGGGTGCGGGCTGGAAAGG
TTGTCACGGTAAGACTCTGTTACACGCGGCTGCTGAGGGCGGAGACGGTC
GGGTCGTCACGGCGTTGATCAGAGCCGGCGCCGGAGCGGATAAGAACGCC
AAAGATCCTGATACTGGCCGCACTCCACTCCATCTTGCGGCACTCGGCGG
GAGGGAGGCTGTTGCGAAGGTGCTGATCATGGCTGCAGCGGATGTGAACA
TCCTCGACAGCAAGAAGGACGCCCCGCTGCACTTGGCCATCGAAAGCGAT
GATGCTGGCATTGCTGAAGCCCTGTTACTTGGCGGAGCCAACCACGCCGT
GAGAGGTTCCAAAGGAGACTACCCCATTCACCTCGCTGCTTGCCACGGTG
AGAACGAGATAGTGCGGGCGTTGGTGCAAAGGGGGGCGAACCTGGACCGC
CTCAATCGCTCAAAGGAGACCCCCCTCGCTATCGCTGTGCGTGAGGATCG
CGTTTCCACCGTGGAAGTTCTCCTGGCCGGAGGTGCCGATGCGAACTTTC
ACATAGACACCGAGTGCGAAACCGTCCTACACCACACCGCGCGGCTCGAA
AAACCGGCCTCAATTCCAGCACTCATCGAGGCCGGGGCCGACATCGAAGC
CAGGGATACCGACGGTTGCACACCGCTCTACCTTGCAGCAGGCTTTGACT
CGCGGACGGCTATGCTTGCTCTGCTGCAGCTGGGAGCCATTGCCAACGCG
AAAGACAACGACGGAGGCACTCCGCTGCATAACGCGTGCTTAGCTAATCA
CCCCTATGCTGCAAACCTGCTGTTACGGTGGGGCGCTGACGAGACCATCG
TCGATAACGACGGCAAGACCCCCAGCAGCGAAATACTTCCAGACGTCGCT
GAAGCTTCCGAGGGGAACCGCCTGAGAATCCAACGCCTGACGAAGCTGCT
GGCGCACGCCCCGCAGGACAGGGCCTGGCGTCGCCGGGGCTTTGTGGTCA
TGTGCCGCGCCCACCAAGACAGGTTGCGGCTTGCAGTAGAGACCCCTGAC
AACGCAGCTGAGGCTATCGGGCAGCAGCCGCAGGAGCGTCCGAGCCGCCG
TCCTAGGATGGGGCAGGTGAAGGTCGAGGTTCAGGTGGGTGACGCACATG
GAGCTGGAGGAGGAGGGGGTGCGGGCAGCAGCAGCAGCAGCAGTAGCGTG
CACCACACCGAGAGAAGGGCTGGAGGCGAGGGTGTCAGCGGCGGGTTCGA
TGGTGTGGCGGCCTGGCTCATGGCGGTGACCGATGGAGGCGTGTTCCGCA
ACATCGTGGGGTTCCTTTAGATGCCGGGATTCGAAGACCGGGCGAGCATC
CTGCAGGGTGCAGGAGACATGATATTCAAACTGGTGTGCGATAGGTCGAC
GCCGGAGCAGTGGGCGGAGTGGCTGAGGGCACCGCTGGAGCACGCCACAG
GCACTGCCAATTATGATCTGGTGCAGAAGCTACTGAAAGCTGGCGCTAAC
GGGGGTGCGGGCTGGAAAGGTTGTCACGGTAAGACTCTGTTACACGCGGC
TGCTGAGGGCGGAGACGGTCGGGTCGTCACGGCGTTGATCAGAGCCGGCG
CCGGAGCGGATAAGAACGCCAAAGATCCTGATACTGGCCGCACTCCACTC
CATCTTGCGGCACTCGGCGGGAGGGAGGCTGTTGCGAAGGTGCTGATCAT
GGCTGCAGCGGATGTGAACATCCTCGACAGCAAGAAGGACGCCCCGCTGC
ACTTGGCCATCGAAAGCGATGATGCTGGCATTGCTGAAGCCCTGTTACTT
GGCGGAGCCAACCACGCCGTGAGAGGTTCCAAAGGAGACTACCCCATTCA
CCTCGCTGCTTGCCACGGTGAGAACGAGATAGTGCGGGCGTTGGTGCAAA
GGGGGGCGAACCTGGACCGCCTCAATCGCTCAAAGGAGACCCCCCTCGCT
ATCGCTGTGCGTGAGGATCGCGTTTCCACCGTGGAAGTTCTCCTGGCCGG
AGGTGCCGATGCGAACTTTCACATAGACACCGAGTGCGAAACCGTCCTAC
ACCACACCGCGCGGCTCGAAAAACCGGCCTCAATTCCAGCACTCATCGAG
GCCGGGGCCGACATCGAAGCCAGGGATACCGACGGTTGCACACCGCTCTA
CCTTGCAGCAGGCTTTGACTCGCGGACGGCTATGCTTGCTCTGCTGCAGC
TGGGAGCCATTGCCAACGCGAAAGACAACGACGGAGGCACTCCGCTGCAT
AACGCGTGCTTAGCTAATCACCCCTATGCTGCAAACCTGCTGTTACGGTG
GGGCGCTGACGAGACCATCGTCGATAACGACGGCAAGACCCCCAGCAGCG
AAATACTTCCAGACGTCGCTGAAGCTTCCGAGGGGAACCGCCTGAGAATC
CAACGCCTGACGAAGCTGCTGGCGCACGCCCCGCAGGACAGGGCCTGGCG
TCGCCGGGGCTTTGTGGTCATGTGCCGCGCCCACCAAGACAGGTTGCGGC
TTGCAGTAGAGACCCCTGACAACGCAGCTGAGGCTATCGGGCAGCAGCCG
CAGGAGCGTCCGAGCCGCCGTCCTAGGATGGGGCAGGTGAAGGTCGAGGT
TCAGGTGGGTGACGCACATGGAGCTGGAGGAGGAGGGGGTGCGGGCAGCA
GCAGCAGCAGCAGTAGCGTGCACCACACCGAGAGAAGGGCTGGAGGCGAG
GGTGTCAGCGGCGGGTTCGATGGTGTGGCGGCCTGGCTCATGGCGGTGAC
CGATGGAGGCGTGTTCCGCAACATCGTGGGGTTCCTTTAG
back to top