mRNA_L-elsbetiae_contig68.15557.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig68.15557.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI) HSP 1 Score: 1374 bits (3556), Expect = 0.000e+0 Identity = 1429/3039 (47.02%), Postives = 1616/3039 (53.18%), Query Frame = 1 Query: 1 VEAVLSPTAGWVLDVVAFAEAPETLQHRATLELAATNQLKNLRVQLESRLEMAMSDRFLTFLDLDVKAPLLVVPVEL--GGRGXXXXXXNVETG----ATRRGVDAGGEQKEXXXXXXXXXXXXXXKRPRGAGEQSWHAKFYDVYKVEVHRVGVLLLAGTDSGXXXXXXXXXXXXXXXGSGHGERGGNRWLVDPFDVEMELHLSVMPNDPSVSQLKVYGDLPRLHVRLSQDKLRRLAIMSAAIAAQLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----MSSLASFLDFQRSLSQRFDHLHQPREGWFPPDATAAAXXXXXXXTTAPLGRHELRRLRLSDQSLDWEGGGGRGWGAXXXXXXXXXXXXXXXXXXXXDEEFASAWGGSSWGGAGNERGSRASSFVSVAESLSSMDG----------GRICRSSSAVSEYYDVNDSDGEPASPERWKLPEGGVGV---KQGVAAPQPGGEDTGSGEEGWHIGVPSRAAAGAEKDGGDXXXXXXXXXXXXXSSGDSLEFQDARDPVSEMDEALMVKEAEKAELLKRRQRLREQLVSRKAGGGALTDAELERVRLASREVSQRLEACEDELKGLESALXXXXXXXXXXXXXXENNEFGFVPAIADXXXXXXXXXXXXXTGIDGGTGLA-HSQSPPSVFRPXXXXXXXXXXXXXXG-----LPAGPNREVIMCGLTVPLVQVDILRDVVAVSASTENKRRSRRGGDAVAPXXXXXXXXXXXXXXXXXXXXXXXRARPGCTLAGRGWE-EXXXXXVVSLRLVGLGMQLHSKSYGARFSFSMQDLDLEDRLQAS---RRSRTSAVNIRSVLGTATAAGEDEDARARESVPSPMPXXXXPPLAXXXXXXXXXXXXXXXXXXXXXXXXAAERPAAGDMATTSPRLFLWQPREGGASTGVDGLPPRRREVTFRGGEARDDGAGXXXXXXXXXXXXXXXXXXXXXTERVGG--GSGSLLRPDFIQLSYAMKKAP--GGGCGAGGGGESHRVKLLVGAIEMTLEQETILAIVRVVASFSDN-----------------LSASRPSSLPSPXXXXXXXTNPSDAVRSGSTAGLSPSAFPPXXXXXXXXXXXXXVDITMPMLPRGVSVSVVVDLAAVSIALAEDGVNVAAVALSAAHCKVNVGLEVCDCAVGVPLDG---LDAGGGDSAAVPA----SRVTAKLGHLLVDTTWAQPET--AAATGGSEGERPG-TLDVEALLSSAVVELEPEGFEILEAVHVRAVGAIPLGAAGAGSADGAIRGGGSGDEVASNSSPPPRDELAEKLREKTGRDDHDHPAAVTLLPLRPVLRRGQGDA----------GGCPDRARLGVAVSPVRFNITEAHVLGLACCALSASTRLAAVAGALAPPISCCPDAQRGRDDGEGVGSAAAVGEADEGLVGDDSDREGRASRLGSLAAPQGEG-------------AGE------------------PCEGVAGDGDQAAAAAAVAATSPLPRCNQEAQQIPDGVPLEHQHTNGLLSTEGGRLDGALSDGDGGSDQPRSSKQFAGEG--EPAVAVASAVSET-----GPAVPPAFLGTLIIEAISVMLLKDSRGFTDGAGVTGDPSGGLAAGMDTLPGQPAAG---------AGAAGANTAVLAAHRLRPALSPRRARSERRWRSADTTSTGLLAPCRRRYSGMVYLEIAGIGAGIDLPLPWRTSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYLAEFAVKRISLTDVSAERRRRGSLSRLVGGG-AASGAPARSAAAGGALASGVGGTGEHRRNDVDGENVRVLPRGWWHRHSGENGG-------DLDAGYDEQVLVRAGFCPASGTATVDANLASSRLMLLPAPILDALDLVAGVERGIAKFSRRRADPETASSPSQVDDAASTPRDVTPGGGPLRNDVSTALAPALGGRRTAGAADXXXXXXXXXXXXXXXXXXXXXXAAG---DHEEFGNHASWRWQMIRALSGAGLVDLLLLRRINLSASAEDLQLWLPGVEKEDTAVTPAAAAGGSTHGGVEAVVAACGRCHGAVSIALHLLST----EATEPDNAEQAADPTAAPATAP---DFPLASRIVTNSFGPLLSGGAPAXXXXXXXXXXXXXXXXXGTPAVAHGLSS---SLSXXXXXXXXXXXXXXXXXXXXXXXXXXX---TATAASSLAEMWACRVGFKAAGLRAKIVNNFYRQKRPCVIVNVRNLALF*VVCRFLRPCEHVGRRSLVPGAESTCWRQTIFFVPGVTGELAASGAARSLQATVSARIESDFYNARLMAWEPLMEPWGARLELDVETYSGLSAAAETG--------------GRIS-----GGARRNAXXXXXXXXXXXXXXXXXX------------------------------------GGDAPVGAG-TLVGVRLVSDEVLDVNLTESLVENLAAVAHAQQRQEESQKLARGWAGDGG------------DNSFSLHWLRNETGLPVVCSAHCRESRGSGXXXXXXXA-ADGNEDAEAA-LPVRVPAGEEAPMGGSLGLPLRAVVLEFEERGQGRERGAGGASEAWRSLRPIDLDDADRLQSSKSALGASSSWRSGTWTWAARAASAAGGSSAAPG----VGGETVKVVTEVESHHGVKVLRVRSLIEIANEMSDNVCIHVGLLGEGVVPVGGRGWGRRRGSAAAGPPRFEWEAVVRPGRSCPVPATLAAAVVEGRRLLVVRPVVGGDDDNDGDNHAGRVGTVRGARAGAGEPSEEGVSPPSSPSPA-------------------------GGDGQRPLAAREPSYANGPVVEEFEEAILTLPDPAEWRGFSAAVADKNASYHQTLEFPPAAPAHASRRGAAIFCGVSVARKREGGRSGRSARAEKTAAGGGXXXXXXXXXXXXXXXXXXXXXXEDGGG-------VWSDTIERGTEASWFHCPPDEEVTMSLFLEGFGWSQDFILPPP 8361 VEAV+SPTAGWVLD+VAFA+ PETLQHRATLELAATNQLKNLRVQ+ESRLEMAMSDRFLTFLDLDVKAPLLV+PV+L GG G + + G A GV A G+ KR R GE SWHAKFYDVY+VEVHRVGVLLLAG S G E RWLV+PFDV+MELHLSVMPNDPSVSQLKVYGDLPRLHVRLSQDKLRRLA MS AIAAQ AXXXXXXXXXXX XXXXXX MSSLASFL+FQRSLSQRFDHLHQPREG P A A APLGR ELRRLRLSDQ LDWEGGGGRG XXXXXXXXXXXXXXXXXXXX GRI R+ S SE+YD D DGEP SP+RW ++G AAPQPGGEDTGSGEEGWH+GV + AA XXXXXXXXXX DSL+FQDARDPVSEMDE LM KEAEKAEL+K+RQ+LR +L R G EL+RVR AS EVSQRLEACE+ELK L L + FG A A +GG FRP XXXXXXXXXXXX LPAGPNREVIM GLTVPL+QVD+L+D+ A AS E + S RGGD V XXXXXXXXXXXXXXXX + RP + GWE E VVSLRLVGLG+QLHSKSYGARFSFSMQDLDLEDRLQ S RR +T + XXXX XXXXXXXXXXXXXXXXXXXXXXXX G+ A XXX XX RVGG G G +LRPDFIQLSYAMKK+P GG G+ ESHRVKLL+GAIE+ LEQET+LA RV+ASFS XXXXXXX XXXXXXXXXXXXX +++MPMLP G+SVS+VVDLAAVS+AL E GVNVAAVALSAAHCKVNVGLEVCDC +GVPLDG D G G + A SRV AKLG LL D TW P AA T S G PG +L VE L+SSAVV+LEPEGF +LEAVH R +G PLGA GA AD A RE++ R D A LLP RPVL RGQG GG +R +LGVAVSPVRFN+TE H+LGLA A+ AS RLA V A P S P GE + AV A + G+ R AS GS AA AG GD + A S LPR Q+ +G P + D L +GD +Q AGEG A AV ++ ET P VPPAFLGT I++AISVMLL++ G D TG A + G P A A A GA T A PA R T + + YSG+V+LE+ GIGA +D+P P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXQY AEFA+KRISLTDVS RRR G+L++LV G A+ A + +RVLP GWW + G G D GYDEQVL+RA CP SGTAT DA LAS R +LL AP+LD VAGV+RG+A+ RA+ ++ + ++++ R GGG N A GG R A XXXXXXXXXX AA + EE G +WRWQ RALS AGL ++L LRRI++SASA DLQLWLPG E AV A GVEA+VAACGRCH A+SIA+ L++ + + + +AA P P A DFPLA+ I+TNS GPLL XXXXXXXXXXXXXXXXX G +S SLS +ATA S LA MW CR F+AAG R KIVNNFYRQKRP V+V F CR C + + + G ++ R VP VTGEL ASGAARSL VS +IESDFYNARLMAWEPL+EPWGAR+EL+V G A TG GR+S G RRN XXXXXXXXXXXXX G A G+G VGVR VS++VL++NLTESLVENLAA+AHAQQR DNSFSLHWLRNETGLPVVCSAH RE+RG XXXXX DG +DAEA +PV+VP G+EAP+ SLG P+RAVVLE EE+G RE GA+ +WRSLRPI LD A +WTWAARA +AA AA G E VKVVTEVES+ GVK+LR+RSL+E+AN M +VC+HVGL+GE P R R RG+ +G RFEWE +V PGRSCPVPATLAAAVVEGR+LLVVRPV+ GG G+R A+ S A G V EEF+EA+L LPD EW AD+ ASYH+TLEF PA P R G +FCGVSVARK +A GXXXXXXXXXXXXXXXXXXX XX WSDTIERG E SW HCPPDEEVT +++LEGFGWS+DF+LP P Sbjct: 953 VEAVMSPTAGWVLDIVAFAQPPETLQHRATLELAATNQLKNLRVQVESRLEMAMSDRFLTFLDLDVKAPLLVIPVDLSGGGGGPRGPDQDKKEGRVQPAAEGGVAAAGKN---GFGVPGAGSGGGFKRQRATGE-SWHAKFYDVYRVEVHRVGVLLLAGRGS--------------RSGDWGEEEAAKRWLVNPFDVKMELHLSVMPNDPSVSQLKVYGDLPRLHVRLSQDKLRRLARMSVAIAAQSAXXXXXXXXXXXGDGGPSPPPEDGGLSERDDVDIRAAAGYSDVSNDGXXXXXXXXXXXMSSLASFLEFQRSLSQRFDHLHQPREGSAPTPGNAEA-------AVAPLGRRELRRLRLSDQGLDWEGGGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRISRTVSGESEFYDAADGDGEPLSPDRWAYAAAAAAAEVARKGPAAPQPGGEDTGSGEEGWHVGVSAEAAXXXXX-------XXXXXXXXXXXXXDSLDFQDARDPVSEMDEMLMAKEAEKAELMKQRQKLRGKLEDRGLAGD-----ELDRVRSASEEVSQRLEACEEELKDLXXXLEDVTEEFERAAEMLGMDNFGGGVAGARREEMNADAVVDGPAKENGGASFTPXXXXXXXXFRPVLXXXXXXXXXXXXXDPGFRLPAGPNREVIMFGLTVPLIQVDLLQDMTA-PASREKRDTSGRGGDVV--FLAASXXXXXXXXXXXXXXXXKRKVRPSDQVVA-GWEGEGEEEEVVSLRLVGLGVQLHSKSYGARFSFSMQDLDLEDRLQESSKKRRVKTERSFVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLSTTPA------EALEREKTGXXXGVXXXXRVGGSEGLGCVLRPDFIQLSYAMKKSPVRGGRSGSQRSQESHRVKLLLGAIEIGLEQETLLATARVLASFSTEHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVSMPMLPPGMSVSIVVDLAAVSVALTEAGVNVAAVALSAAHCKVNVGLEVCDCELGVPLDGGIGADGGSGGLDGIIAGRAGSRVAAKLGLLLTDVTWTAPAVRPAAITEASGGGGPGGSLSVETLVSSAVVKLEPEGFNLLEAVHARVLGRFPLGATGA--ADPAAPXXXXXXXXXXXXXXXXXXXXXXXXRERSSRGDDAVAAETLLLPPRPVLSRGQGGGAXXXVVAXXXGGVSERPQLGVAVSPVRFNLTELHMLGLARFAMDASARLAVV---FAGPSSLSPPHVLCSQHGESTTAVVAVDSATDEPEGE---RLASASVEGSQAAAVXXXXXXXXXXXXXDVTAGSNKXXXXXXXXXXXXXXXXXXXXXEGDRNPPQGFNDAPAVSTLPR-----HQLANGPPRNN--------------DATLGEGD---------RQHAGEGVATSAAAVTTSAPETVAAAKAPPVPPAFLGTFIVDAISVMLLEE--GGEDSGRRTGGXRATAAGALPAGGGYPEARVNGVARKHPAPADGAATDTAA-----PATRXXXXXXXXXXRHRGTRAAAIPGTRHFCYSGLVFLEVEGIGAAVDVPSP---GAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVDQQQGXXXXXXXXQYRAEFAIKRISLTDVSDRRRRLGALAKLVSGDDIAARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELRVLPAGWWRQPRGTESGCERQEVHDGGGGYDEQVLLRARVCPVSGTATADARLASGRFVLLAAPLLDVFGAVAGVQRGLARGPSCRAESGVVAAAVESEESSLGVR----GGGEDGNSTRVDEASTAGGVRPADERLLRPSAXXXXXXXXXXEEGRSGDAATGIPEQEEDGLGNNWRWQASRALSDAGLAEMLWLRRIDVSASAHDLQLWLPGGASEAAAVDGEA--------GVEAIVAACGRCHAALSIAVGLVAEGPAGAVSSVERSRRAAGPPTTPPRAAARGDFPLATCIMTNSLGPLLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAASTPRSLSHGGGGRGPGESPAGAVATSLPVPPSTAALPSATAVSELATMWTCRGRFQAAGARMKIVNNFYRQKRPAVVVKAVKRIFFPAECRLW--CYDISDWAELKGRKTDEHRDKT--VPAVTGELTASGAARSLHGAVSFKIESDFYNARLMAWEPLVEPWGARVELEVG-LGGAGARRSTGRQEXXXXXXSADRAGRLSSPGHHGRGRRNGRXXXXXXXXXXXXXQLQGLARRLSTHGAPWRQQQQRESTTGGLERGSASAEGGRGNRATGGSGGVFVGVRFVSEDVLNLNLTESLVENLAAIAHAQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSFSLHWLRNETGLPVVCSAHYREARGGXXXXXXSLGLTDGEDDAEATTVPVKVPVGQEAPVAASLGRPVRAVVLELEEKGGEREEEEEGAT-SWRSLRPIALDVAGGQ----------------SWTWAARALAAAPEDVAAVGRKXXXXXEAVKVVTEVESYRGVKMLRIRSLVEVANGMGGDVCLHVGLVGEEEAPGSSRRR-RSRGAPRSGS-RFEWETMVLPGRSCPVPATLAAAVVEGRKLLVVRPVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGHGER--GAKAVSEA-GVVAEEFQEALLVLPDREEWGLREDTTADRTASYHRTLEFAPAGPPQPGRTGP-VFCGVSVARKAS------AAXXXXXXXXXGXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXEWAWSDTIERGDELSWLHCPPDEEVTAAVYLEGFGWSKDFVLPLP 3852
BLAST of mRNA_L-elsbetiae_contig68.15557.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE) HSP 1 Score: 862 bits (2228), Expect = 8.110e-254 Identity = 1137/3185 (35.70%), Postives = 1308/3185 (41.07%), Query Frame = 1 Query: 1288 GRICRSSSAVSEYYDVNDSDGEPASPERWKLPEGGVG---VKQGVAAPQPGGEDTGSGEEGWHIGVPSRAAAGAEKDGGDXXXXXXXXXXXXXSSGDSLEFQDARDPVSEMDEALMVKEAEKAELLKRRQRLREQLVSRKAGGGAL---TDAELERV---------RLASREVSQRLEACEDELKGLESALXXXXXXXXXXXXXXE-NNEFGFVPAIADXXXXXXXXXXXXXTGID------------GGTGLAHSQSPPS-----VFRPXXXXXXXXXXXXXXGL--PAGPNREVIMCGLTVPLVQVDILRDVVAVSASTENKRRSRRGGDAVAPXXXXXXXXXXXXXXXXXXXXXXXRARPGCTLAGR---GWE-EXXXXXVVSLRLVGLGMQLHSKSYGARFSFSMQDLDLEDRLQ-ASRRSRTSAVNIRSVLGTAT---AAGEDEDAR--ARESVPSPMPXXXXPPLAXXXXXXXXXXXXXXXXXXXXXXXXAAERPAAGDMATTSPRLFLWQPREGG-----------------------ASTGVDGLPPRRREVTFRGGEARDDGAGXXXXXXXXXXXXXXXXXXXXXTERVGG--GSGSLLRPDFIQLSYAMKKAP--GGGCGAGGGGESHRVKLLVGAIEMTLEQETILAIVRVVASFSDNLSASRPSSLPSPXXXXXXXTNPSDAVRSGSTAGLSPSAFPPXXXXXXXXXXXXXV-----------------DITMPMLPRGVSVSVVVDLAAVSIALAEDGVNVAAVALSAAHCKVN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VGLEVCDCAVGVPLDG---LDAGGGDSAAVPA----SRVTAKLGHLLVDTTWAQPETAAATGGSEGERP-------GTLDVEALLSSAVVELEPEGFEILEAVHVRAVGAIPLGAAGAGSADGAIRGGGSGDEVASNSSPPPRDELAEKLREKTGRDDHDHPAAVTLLPLRPVLRRGQGDAGGCP-------------DRARLGVAVSPVRFNITEAHVLGLACCALSASTRLAAVAGALAPPISCCPDAQRGRDDGEGVGSAAAVGEADEGLVGDDSDREGRASRLGSLAAPQGE---------GAGEPCEGVAGDGDQAAAAA---AVAATSPLPRCNQEAQQIPDGVPL------EHQHTNGLLSTEGGRLDGALSDGDGGSDQPRSSKQFAGEG--EPAVAVASAVSET-----GPAVPPAFLGTLIIEAISVMLLKDSRGFTDGAGVTGDPSGGLAAGMDTLPGQPAAGAGAAG----ANTAVLAAHRLRPALSPRRARSERRWRSADTTSTGLLAPCRRRYSGMVYLEIAGIGAGIDLPLPWRTSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYLAEFAVKRISLTDVSAERRRRGSLSRLVGGG--AASGAPARSAAAGGALASGVGGTGEHRRNDVDGENVRVLPRGWWHR-HSGENGGDLD------AGYDEQVLVRAGFCPASGTATVDANLASSRLMLLPAPILDALDLVAGVERGIAKFSRRRADPETASSPSQVDDAASTPRDVTPGGGPLRNDVSTALAPALGGRRTAGAADXXXXXXXXXXXXXXXXXXXXXXAAG---DHEEFGNHASWRWQMIRALSGAGLVDLLLLRRINLSASAEDLQLWLPGVEKEDTAVTPAAAAGGSTHGGVEAVVAACGRCHGAVSIALHLLS-------------------------------------------------TEATE-----------------------------PDNAEQAADPT---------------------AAPATAP------------------------------------------------------------------------DFPLASRIVTNSFGPLL----SGGAPAXXXXXXXXXXXXXXXXXGTPAVAHGLSSSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXTATAASSLAEMWACRVGFKAAGLRAKIVNNFYRQKRPCVIVNVRNLALF*VVCRFLRPCEHVGRRSLVPGAESTCWRQTIFFVPGVTGELAASGAARSLQATVSARIESDFYNARLMAWEPLMEPWGARLELDV------------------ETYSGLSAAAETG----------GRISGGAR----------RNAXXXXXXXXXXXXXXXXXXGGDAPVGA---------------------GTLVGVRLVSDEVLDVNLTESLVENLAAVAHAQQRQ------EESQKLARGWAGDGGDNSFSLHWLRNETGLPVVCSAHCRESRGSGXXXXXXXAADGNEDAEAALPV---------------RVPAGEEAPMGGSLGLPLRAVVLEFEERGQGRERGAGGASEAWRSLRPIDLDDA----------------------------------------------DRLQSSKSALGASSSWRSGTWTWAARAASAAGGSSAAPGVGGETVKVVTEVESHHGVKVLRVRSLIEIANEMSDNVCIHVGLLGEGVVPVGGRGWGRRRGSAAAGPPRFEWEAVVRPGRSCPVPATLAAAVVEGRRLLVVRPVVGGDDDNDGDNHAGRVGTVRGARAGAGEPSEEGVSPPSSP-------------------SPAGGDGQRPLAAREPSYANGPVVEEFEEAILTLPDPAEWRGFSAAVADKNASYHQTLEFPPAAPAHASRRGAAIFCGVSVARKREGGRSGRSARAEKTAAGGGXXXXXXXXXXXXXXXXXXXXXXEDG-----------------------------------------GGVWSDTIERGTEASWFHCPPDEE---VTMSLFLEGFGWSQDFILPPP 8361 GRI R+ S SE+YD D DGEP SP+RW G +++G AAPQPGGEDTGSGEEGWH+GV + AAA XXXXXXXXXX DSL+FQDARDPVSEMDE LM KEAEKAEL+K+RQ+LR +L R G L + + RV R AS EVSQRLEACE+ELKGLESAL +N D I+ GGT SPP V P XXXXX G PAGPNREVIM GLTVPL+QVD+L+D+ A AS E + S RGGD V XXXXXXXXXXXX + + + GWE E VVSLRLVGLG+QLHSKSYGARFSFSMQDLDLEDRLQ +S++ RT A G A A GE+E + A + V P PP XXXXXXXXXXX E+PAAGDMATT PRL LWQ +GG XXXXXXXXXXXXXXXXXX XX RVGG G G +LRPDFIQLSYAMKK+P GG G+ G ESHRVKLL+GAIE+ LEQ T+LA RV+A+FS XXXXXXX XXXXXXXXXXXXX +++MPMLP G+SVS+VVDLAAVS+AL E GVNVAAVALSAAHCKVN VGLEVCDC +GVPLDG D G G + A SRV AKLG LL D TW P A G G+L VE L+SSA V LEPEGF++LEAVH R +G LGA GA AD LAEKLRE+ R D AA LLP RPVL R QGD +R +LGVAV+PVRFN+TE+H+LGLA A+ AS RLA V P S P GE S AV E D + +R S GS AA GAG+ G + DQA A A AA SPLP + A+ P GV HQ +NG D L +GD +Q AGEG A AV + ET P+VPPAFLGT I++A+SVMLL A G P A A T PA R T + + YSG+V+LE+ GIG G+D+P XXXXXXX XX XXXXXXXXXXXXXQ AEFA+KRISLTDVS RRR G+L++L+GG AA G P G A +RVLP WW + E+G + + GYDEQVL+RA CP SGTAT DA LAS R +LL AP+LD +VAG + ++++ R GGG N AP GG R A XXXXXXXXXXXXX AA + EE G +WRWQ RALS AGL ++L LRRI +SASA DLQLWLPG TAV A GVEA+VAACGRCH A+SIA+ L++ T+A E P E + PT APA AP DFPLA+ I+TNS GPLL XXXXXXXXXXXXXXXXX XX ATA S LA MW CR F+AAG R KIVNNFYRQKRP V+V V G E R + VP VTGEL SGAARSL A VS++IESDFYNARLMAWEPLMEPWGAR+EL+V E S+A G GRI+G R R ++ G G V VR VS++VL++NLTESLVENLAA+AHAQQRQ DNSFSLHWLRNETGLPVVCSAH RE RG XXXXXXX +VP G+EAP+ SLG P+RAVVLE EE+ G A+ +WRSLRPI LD A + L+SS S ++SWR G+WTWAA A +AA AA G E V+VVTEVES+ G K+LR+RSL+E+AN M +VC+HVGL+G+ P RG R RG+ AG RFEWE +V PGRSCPVPATLAAAVVEGR+LLVVRPV S GG G+R A+ S A G V EEF+EA+L LPD EW DK AS+H+TLEF A P A IFCGVSVARK A A KT AG G G WSDTIERG E SW HCPPDEE VT +++LEGFGWS+DF+LP P Sbjct: 10 GRISRTVSGESEFYDAADGDGEPLSPDRWAHAAGAAAAAVMRKGPAAPQPGGEDTGSGEEGWHVGVSAEAAAXXXX-------XXXXXXXXXXXDDDSLDFQDARDPVSEMDEMLMAKEAEKAELMKQRQKLRGKLEERDLAGDELHRVREGKASRVWPGSTAPAKRSASEEVSQRLEACEEELKGLESALENVTEEFERAAKMLGIDNSGXXXXXXXDDGSSNGGVAGVRREEINADAYVDGPAKENGGTSFTPPPSPPQQCFRPVLSPPGQEGGSXXXXXDPGFRPPAGPNREVIMLGLTVPLIQVDLLQDMTA-PASREKRDTSGRGGDVVFLAAFEGGESDGGXXXXXXXXXXXXXGKRNVRSSDQVVAGWEGEGEEEEVVSLRLVGLGVQLHSKSYGARFSFSMQDLDLEDRLQESSKKHRTKAARSFVPDGAAAVVAAVGEEEGQKPKAGDEVGVPSRPNSLPPTRDGXXXXXXXXXXX------------GEQPAAGDMATTRPRLCLWQRCDGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXRVGGSEGMGCVLRPDFIQLSYAMKKSPVRGGRSGSQWGQESHRVKLLLGAIEIRLEQATLLATARVLAAFSTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGGDSGDGVGGEVSMPMLPPGLSVSIVVDLAAVSVALTEAGVNVAAVALSAAHCKVNAENVRVKAVISLGDLYVLNLLRPPPLRSPALSFAGEGGRGXXXXRPGRGAVTVEHSAAGLTGDAARREHGLGGGGNRDALDRHVGDDGSPLAWAEPVLGRRKGAVGPVLDVALVVVRCAAGGHAHTAGAESATAGLDGGXXXXXXXXXXXXXXXLEARVKIRLDAVRTDLSVPFVENIARHVLTGPMMSQLLLPQPQGDSCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGGAQATADEGLRRDFSDSNGTXXXXXXXXXXXXXXXTGAPAGSVGTGWRDGPRQGGVTEDDNSWENLVFIKVGLEVCDCELGVPLDGGICADGGSGGLDGIIADRAGSRVAAKLGLLLTDVTWMAPAVRPAATTEAGXXXXXXXGPGGSLSVETLVSSAAVMLEPEGFDLLEAVHARVLGRFLLGATGA--ADPXXXXXXXXXXXXXXXXXXXXXXLAEKLRERLSRGDEPVAAATLLLPPRPVLSRSQGDXXXXXXXXXXXXXXXXVSERPQLGVAVTPVRFNLTESHMLGLARFAMDASDRLAVVFAG--PSSSPSPPHLDRSQHGE---STTAVVEVDSATDEPERERLASVSVEGSQAAAVATTAVVESPDAGAGDVATG-SNKSDQATAVANGRGAAAPSPLPP--EGARDPPQGVNEAVSTLPRHQLSNGPPRNN----DATLGEGD---------RQHAGEGLATSAAAVTTPAPETVAAAKAPSVPPAFLGTFIVDALSVMLLXXXXXXXXXXXXXXXXXATAAGARPAGGGYPEARINGVARKHPAPTDGAVTDTAAPAGRXXXXXXXXXXRHRGTRAAAIPGTRHLCYSGLVFLEVEGIGVGVDVP---SXGXXXXXXXXSQSSPVMHTAAAEAAVXXGSAPDEQFGXXXXXXXXXXXXXQCRAEFAIKRISLTDVSDRRRRLGALAKLIGGDDIAADGGP------GPAAXXXXXXXXXXXXXXXXXXXLRVLPAAWWRQPRETESGSEREEVHDGGGGYDEQVLLRACVCPVSGTATADARLASGRFVLLAAPLLDVFGVVAGXXXXXXXXXXXXXXXXXXXXAVENEESSLGAR----GGGEDGNSARVDEAPTAGGVRPADERLLRPSAXXXXXXXXXXXXXRSGDAATGIPEEEEDGRRNNWRWQASRALSDAGLAEMLWLRRIYVSASAHDLQLWLPGGASAATAVDGEA--------GVEAIVAACGRCHAALSIAVGLVAEGPAGTVSSVERSPRAAGPPTTPPRAGPRGGEEKVDAAGAAAGVXXAADTDAAETTAAELCVMSLGLEGLQVFVARPSMSDFGPSQQESSPSPTQPEEAVPAGLRGADDGQERQPTAPAPAPAGTTGRCLRGGLSNGEGLVLPFRVDFKHVILARSPPTXXXXXXXXXXVAAPSPQLVSELDGSVSPITVRVFLDFPLAACIMTNSLGPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGPGESPAGVAATPPPVSPSTAALPAATAVSELATMWTCRGRFQAAGARMKIVNNFYRQKRPAVVVKV--------------------------GKERPL-RSLLLMVPAVTGELTMSGAARSLHAAVSSKIESDFYNARLMAWEPLMEPWGARVELEVGLXXXXXXXXARRSTGRLEPSPPASSADRAGRLSLPGHHGRGRINGRDRGXXXXXXXXXRQLQGLARRLSTHGVPWRQQQQRESTTGGLXXXXXXXXXXXXNRATGGPGGVFVDVRFVSEDVLNLNLTESLVENLAAIAHAQQRQGXXXXXXXXXXXXXXXXXXXXDNSFSLHWLRNETGLPVVCSAHYREPRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPVGQEAPVAASLGRPVRAVVLELEEK-DGEVEEEEEAATSWRSLRPIALDVAGGQRLAKMVAETAAXXXXXXXXXXXXXXXXSFSTREGRHSSAGDASEMLRSSLSNDRTTTSWRPGSWTWAALALAAAPEDVAAGRKGREAVEVVTEVESYRGFKMLRIRSLVEVANGMGGDVCLHVGLVGQEEAPGSSRGR-RSRGAPRAGS-RFEWETMVLPGRSCPVPATLAAAVVEGRKLLVVRPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPGGHGER--GAQAASEA-GVVAEEFQEALLVLPDREEWGLREDTTTDKTASFHRTLEFARAGPPQAGST-RPIFCGVSVARK---------APAPKTGAGNGAGGKVTTVSFVPTMSLTNLLAAPAGVRLSCPSSSPSLTYLRARXXXXXXXXXXXXXXXXXXXXXXXXWAWSDTIERGDELSWLHCPPDEEASAVTAAVYLEGFGWSKDFVLPLP 3087
BLAST of mRNA_L-elsbetiae_contig68.15557.1 vs. uniprot
Match: A0A6H5JPL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL9_9PHAE) HSP 1 Score: 251 bits (641), Expect = 1.680e-63 Identity = 194/414 (46.86%), Postives = 206/414 (49.76%), Query Frame = 1 Query: 1 VEAVLSPTAGWVLDVVAFAEAPETLQHRATLELAATNQLKNLRVQLESRLEMAMSDRFLTFLDLDVKAPLLVVPVEL-GGRGXXXXXXN--VETGA---TRRGVDAGGE-----------------------------------------------------------------------------------------------QKEXXXXXXXXXXXXXXKRPRGAGEQSWHAKFYDVYKVEVHRVGVLLLAGTDSGXXXXXXXXXXXXXXXGSGHGERGGNRWLVDPFDVEMELHLSVMPNDPSVSQLKVYGDLPRLHVRLSQDKLRRLAIMSAAIAAQLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MSSLASFLDFQRSLSQR 933 VEAV+SPTAGWVLD+VAFA+ PETLQHRATLELAATNQLKNLRVQ+ESRLEMAMSDRFLTFLDLDVKAP+LV+PV L GG G E GA RGV AG E Q + KR R GE SWHAKFYDVY+VEVHRVGVLLLAG +S G G E RWLV+PFDV+MELHLSVMPNDPSVSQLKVYGDLPRLHVRLSQDKLRRLA MSAAIAA XXXXXXXXXX MSSLASFL+FQRSLSQR Sbjct: 885 VEAVMSPTAGWVLDIVAFAQPPETLQHRATLELAATNQLKNLRVQVESRLEMAMSDRFLTFLDLDVKAPILVIPVNLSGGSGAPRGPDQDKKEGGAQPTAERGVAAGEEENCVFHEEGEGSQGRPSGGVVDKGSTPRKKTGAVAVVAREMLVVDLGSVTLTTDRLAQHLRRRADKEGADGFGSSGSXXXXXXXNEMEEPSSSQRQGKNGFGVPGAGRGGGFKRQRATGE-SWHAKFYDVYRVEVHRVGVLLLAGRES--------------RSGDGEEEEAAKRWLVNPFDVKMELHLSVMPNDPSVSQLKVYGDLPRLHVRLSQDKLRRLARMSAAIAAXXXXXXXXXXXXXARDSVPSPPPEDSGLSERNGVDLRAAGTYSDVGNDGGGAGAGGGMSSLASFLEFQRSLSQR 1283
BLAST of mRNA_L-elsbetiae_contig68.15557.1 vs. uniprot
Match: A0A5D6Y466_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y466_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.060e-5 Identity = 65/261 (24.90%), Postives = 108/261 (41.38%), Query Frame = 1 Query: 4 EAVLSPTAGWVLDVVAFAEAPETLQHRATLELAATNQLKNLRVQLESRLEMAMSDRFLTFLDLDVKAPLLVVP------------VELG------GRGXXXXXXNV------ETGATRRGVDAGGE-------QKEXXXXXXXXXXXXXXKRPRGAGEQSWHAKFYDVYKVEVHRVGVLLLAGTDSGXXXXXXXXXXXXXXXGSGHGERGGNRWLVDPFDVEMELHLSVMPNDPSVSQLKVYGDLPRLHVRLSQDKLRRLA 693 E V SPTA + F P+ L A LE+A+ N + NL+ + E++L+ AM++R +DL ++AP+LV+P V+LG R N +GA G+ G + +G G W +FYD + + V V V L+ + S E LV+ F++ + + +SV+P D ++++ V+ DLP L ++S +K +LA Sbjct: 758 EVVFSPTATCWGRLSGFLNTPKVLGLWAELEVASFNDIVNLKARTEAKLKYAMANRIAVSVDLRIQAPVLVIPASDTDIDCARLLVDLGHINFRTDRLSKLDGENTFSTSSSSSGAPLSGMGGGSSLALLNPASSPNLSSSTSFVKQLYDEAEKGEGAIRWKEEFYDKFSLSVTNVHVSLVPYGKTRASNPVAAGPSLPQPTPSEEQEYE----LVERFNINVTVRMSVLPLDATLTRFYVHADLPALTFKMSLEKYFQLA 1014 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig68.15557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig68.15557.1 >prot_L-elsbetiae_contig68.15557.1 ID=prot_L-elsbetiae_contig68.15557.1|Name=mRNA_L-elsbetiae_contig68.15557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=2089bp MAMSDRFLTFLDLDVKAPLLVVPVELGGRGGGGGGGNVETGATRRGVDAGback to top mRNA from alignment at L-elsbetiae_contig68:26329..48133+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig68.15557.1 ID=mRNA_L-elsbetiae_contig68.15557.1|Name=mRNA_L-elsbetiae_contig68.15557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=21805bp|location=Sequence derived from alignment at L-elsbetiae_contig68:26329..48133+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig68:26329..48133+ >mRNA_L-elsbetiae_contig68.15557.1 ID=mRNA_L-elsbetiae_contig68.15557.1|Name=mRNA_L-elsbetiae_contig68.15557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=12534bp|location=Sequence derived from alignment at L-elsbetiae_contig68:26329..48133+ (Laminarionema elsbetiae ELsaHSoW15)back to top |