mRNA_L-elsbetiae_contig6790.15547.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Match: D8LRI5_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI5_ECTSI) HSP 1 Score: 260 bits (664), Expect = 1.580e-77 Identity = 127/153 (83.01%), Postives = 134/153 (87.58%), Query Frame = 1 Query: 1 ALALPAIFSHFQQKLKLSPRYKPGRAAQLMESVSRAFAHQLSLCLGDTGGDADKRKGLMSMAYGDFAAFMADVDKAFSTWDKEYKXXXXXXXDHCKRRSTTRSGILGGTSGAALLEALHWEHPPLKQRLGEVSAFRKQHENLRGVLQTVLSDD 459 A ALP IF HFQQKLKL+PRYKPGRAAQLMESV+RAFA QLSLCLGDTGGD DKR GLMSMAY +FAAFMADVD AF+TWDKEYK +HCKRRST RSG+LG TSGA+LLEAL WEHPPLKQRLGEVS FRKQHENLRGVLQTVLSDD Sbjct: 405 ASALPPIFGHFQQKLKLTPRYKPGRAAQLMESVNRAFAQQLSLCLGDTGGDVDKRTGLMSMAYPEFAAFMADVDHAFTTWDKEYKAFVAFFAEHCKRRSTARSGVLGSTSGASLLEALRWEHPPLKQRLGEVSGFRKQHENLRGVLQTVLSDD 557
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Match: A0A6H5KY19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY19_9PHAE) HSP 1 Score: 158 bits (399), Expect = 7.030e-42 Identity = 75/95 (78.95%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 175 MSMAYGDFAAFMADVDKAFSTWDKEYKXXXXXXXDHCKRRSTTRSGILGGTSGAALLEALHWEHPPLKQRLGEVSAFRKQHENLRGVLQTVLSDD 459 MSMAY +FAAFMADVD AF+TWDKEYK +HCKRRST RSG+LG +SGA+LLEAL WEHPPL+QRLGEVS FRKQHENLRGVLQTVLSDD Sbjct: 1 MSMAYPEFAAFMADVDHAFTTWDKEYKAFVAFFAEHCKRRSTARSGVLGSSSGASLLEALRWEHPPLRQRLGEVSGFRKQHENLRGVLQTVLSDD 95
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Match: A0A814SN70_ADIRI (Hypothetical protein (Fragment) n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A814SN70_ADIRI) HSP 1 Score: 70.5 bits (171), Expect = 3.300e-11 Identity = 53/148 (35.81%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 7 ALPAIFSHFQQKLKLSPRYKPGRAAQLMESVSRAFAHQLSLCLGDTGGDADKRKGLMSMAYGDFAAFMADVDKAFSTWDKEYKXXXXXXXDHCKRRSTTRSGILGGTSGAALLEALHWEHPPLKQRLGEVSAFRKQHENLRGVLQTVL 450 AL IF H + KL+ + RY RA +LME+VS+ Q+ L LM + Y DF M D F+TWD EY+ D R T R TS + + H L+QRL + FRKQHE LR V+ VL Sbjct: 379 ALTTIFQHLK-KLR-NTRYPVSRAGRLMEAVSQDLMQQMLKVLNTYR--------LMHIGYADFERIMKQCDDVFATWDDEYERLSTQVRDV---RRTVR------TSEVRMAWRVSLSHKKLQQRLDHMKRFRKQHEQLRSVIDRVL 507
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Match: A0A814RNX3_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A814RNX3_ADIRI) HSP 1 Score: 70.5 bits (171), Expect = 3.330e-11 Identity = 53/148 (35.81%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 7 ALPAIFSHFQQKLKLSPRYKPGRAAQLMESVSRAFAHQLSLCLGDTGGDADKRKGLMSMAYGDFAAFMADVDKAFSTWDKEYKXXXXXXXDHCKRRSTTRSGILGGTSGAALLEALHWEHPPLKQRLGEVSAFRKQHENLRGVLQTVL 450 AL IF H + KL+ + RY RA +LME+VS+ Q+ L LM + Y DF M D F+TWD EY+ D R T R TS + + H L+QRL + FRKQHE LR V+ VL Sbjct: 379 ALTTIFQHLK-KLR-NTRYPVSRAGRLMEAVSQDLMQQMLKVLNTYR--------LMHIGYADFERIMKQCDDVFATWDDEYERLSTQVRDV---RRTVR------TSEVRMAWRVSLSHKKLQQRLDHMKRFRKQHEQLRSVIDRVL 507
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Match: A0A820VMP2_9BILA (Hypothetical protein n=2 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A820VMP2_9BILA) HSP 1 Score: 69.7 bits (169), Expect = 5.610e-11 Identity = 53/148 (35.81%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 7 ALPAIFSHFQQKLKLSPRYKPGRAAQLMESVSRAFAHQLSLCLGDTGGDADKRKGLMSMAYGDFAAFMADVDKAFSTWDKEYKXXXXXXXDHCKRRSTTRSGILGGTSGAALLEALHWEHPPLKQRLGEVSAFRKQHENLRGVLQTVL 450 AL IF H + KL+ S RY RA +LME+VS+ Q+ L LM + Y DF + D F+TWD EY+ D R T R TS + + H L+QRL + FRKQHE LR V+ VL Sbjct: 381 ALTTIFQHLK-KLR-STRYPVSRAGRLMEAVSQDLMQQMLKVLNTYR--------LMHIGYADFERIVKACDDVFATWDDEYERLSTQVRDV---RRTVR------TSDVRMAWRVSLSHKKLQQRLDHMKRFRKQHEQLRSVIDRVL 509
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Match: A0A815QUL7_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A815QUL7_9BILA) HSP 1 Score: 68.9 bits (167), Expect = 9.900e-11 Identity = 53/148 (35.81%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 7 ALPAIFSHFQQKLKLSPRYKPGRAAQLMESVSRAFAHQLSLCLGDTGGDADKRKGLMSMAYGDFAAFMADVDKAFSTWDKEYKXXXXXXXDHCKRRSTTRSGILGGTSGAALLEALHWEHPPLKQRLGEVSAFRKQHENLRGVLQTVL 450 AL IF H + KL+ S RY RA +LME+VS+ Q+ L LM + Y DF + D F+TWD EY+ D R T R TS + + H L+QRL + FRKQHE LR V+ VL Sbjct: 386 ALTTIFQHLK-KLR-STRYPVSRAGRLMEAVSQDLMQQMLKVLNTYR--------LMHIGYTDFERIVKACDDVFATWDDEYERLSTQVRDV---RRTAR------TSDVRMAWRVSLSHKKLQQRLDHMKRFRKQHEQLRSVIDRVL 514
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Match: A0A815MTX1_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A815MTX1_9BILA) HSP 1 Score: 68.9 bits (167), Expect = 1.080e-10 Identity = 53/148 (35.81%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 7 ALPAIFSHFQQKLKLSPRYKPGRAAQLMESVSRAFAHQLSLCLGDTGGDADKRKGLMSMAYGDFAAFMADVDKAFSTWDKEYKXXXXXXXDHCKRRSTTRSGILGGTSGAALLEALHWEHPPLKQRLGEVSAFRKQHENLRGVLQTVL 450 AL IF H + KL+ S RY RA +LME+VS+ Q+ L LM + Y DF + D F+TWD EY+ D R T R TS + + H L+QRL + FRKQHE LR V+ VL Sbjct: 387 ALTTIFQHLK-KLR-STRYPVSRAGRLMEAVSQDLMQQMLKVLNTYR--------LMHIGYTDFERIVKACDDVFATWDDEYERLSTQVRDV---RRTAR------TSDVRMAWRVSLSHKKLQQRLDHMKRFRKQHEQLRSVIDRVL 515
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Match: A0A819CLG8_9BILA (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A819CLG8_9BILA) HSP 1 Score: 68.9 bits (167), Expect = 1.130e-10 Identity = 53/148 (35.81%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 7 ALPAIFSHFQQKLKLSPRYKPGRAAQLMESVSRAFAHQLSLCLGDTGGDADKRKGLMSMAYGDFAAFMADVDKAFSTWDKEYKXXXXXXXDHCKRRSTTRSGILGGTSGAALLEALHWEHPPLKQRLGEVSAFRKQHENLRGVLQTVL 450 AL IF H + KL+ S RY RA +LME+VS+ Q+ L LM + Y DF + D F+TWD EY+ D R T R TS + + H L+QRL + FRKQHE LR V+ VL Sbjct: 386 ALTTIFQHLK-KLR-STRYPVSRAGRLMEAVSQDLMQQMLKVLNTYR--------LMHIGYTDFERIVKACDDVFATWDDEYERLSTQVRDV---RRTAR------TSDVRMAWRVSLSHKKLQQRLDHMKRFRKQHEQLRSVIDRVL 514
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Match: A0A818KUX9_9BILA (Hypothetical protein n=21 Tax=Rotaria TaxID=231623 RepID=A0A818KUX9_9BILA) HSP 1 Score: 68.9 bits (167), Expect = 1.140e-10 Identity = 53/148 (35.81%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 7 ALPAIFSHFQQKLKLSPRYKPGRAAQLMESVSRAFAHQLSLCLGDTGGDADKRKGLMSMAYGDFAAFMADVDKAFSTWDKEYKXXXXXXXDHCKRRSTTRSGILGGTSGAALLEALHWEHPPLKQRLGEVSAFRKQHENLRGVLQTVL 450 AL IF H + KL+ S RY RA +LME+VS+ Q+ L LM + Y DF + D F+TWD EY+ D R T R TS + + H L+QRL + FRKQHE LR V+ VL Sbjct: 386 ALTTIFQHLK-KLR-STRYPVSRAGRLMEAVSQDLMQQMLKVLNTYR--------LMHIGYTDFERIVKACDDVFATWDDEYERLSTQVRDV---RRTAR------TSDVRMAWRVSLSHKKLQQRLDHMKRFRKQHEQLRSVIDRVL 514
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Match: A0A814CWX0_9BILA (Hypothetical protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A814CWX0_9BILA) HSP 1 Score: 68.2 bits (165), Expect = 2.120e-10 Identity = 52/148 (35.14%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 7 ALPAIFSHFQQKLKLSPRYKPGRAAQLMESVSRAFAHQLSLCLGDTGGDADKRKGLMSMAYGDFAAFMADVDKAFSTWDKEYKXXXXXXXDHCKRRSTTRSGILGGTSGAALLEALHWEHPPLKQRLGEVSAFRKQHENLRGVLQTVL 450 AL IF H + KL+ + RY RA +LME+VS+ Q+ L LM + Y DF + D F+TWD EY+ D R T R TS + + H L+QRL + FRKQHE LR V+ VL Sbjct: 383 ALTTIFQHLK-KLR-NTRYPVSRAGRLMEAVSQDLMQQMLKVLNTYR--------LMHIGYADFERIVKACDDVFATWDDEYERLSTQVRDV---RRTVR------TSEVRMAWRVSLSHKKLQQRLDHMKRFRKQHEQLRSVIDRVL 511 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6790.15547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6790.15547.1 >prot_L-elsbetiae_contig6790.15547.1 ID=prot_L-elsbetiae_contig6790.15547.1|Name=mRNA_L-elsbetiae_contig6790.15547.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp ALALPAIFSHFQQKLKLSPRYKPGRAAQLMESVSRAFAHQLSLCLGDTGGback to top mRNA from alignment at L-elsbetiae_contig6790:1750..4226- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6790.15547.1 ID=mRNA_L-elsbetiae_contig6790.15547.1|Name=mRNA_L-elsbetiae_contig6790.15547.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2477bp|location=Sequence derived from alignment at L-elsbetiae_contig6790:1750..4226- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6790:1750..4226- >mRNA_L-elsbetiae_contig6790.15547.1 ID=mRNA_L-elsbetiae_contig6790.15547.1|Name=mRNA_L-elsbetiae_contig6790.15547.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=918bp|location=Sequence derived from alignment at L-elsbetiae_contig6790:1750..4226- (Laminarionema elsbetiae ELsaHSoW15)back to top |