mRNA_L-elsbetiae_contig6781.15534.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Match: A0A6H5KTR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTR5_9PHAE) HSP 1 Score: 123 bits (309), Expect = 4.370e-31 Identity = 76/171 (44.44%), Postives = 97/171 (56.73%), Query Frame = 1 Query: 64 QVLSYTASCRHGMEVCSACSRSDDGAGLRKPRPRTAERIHLFGGESEVSSMFPSLSMAVNDPLL--LCKRAGCVLKLFEQ------RENKERKLHVQPRKNRRSVQVPEPVGHLQRRPFDRYCTSPAAVDALVAEVTIQGLVLDMCGGRTDAVALRLGVSCTVVTNDVRTR 552 Q++ ++S R CSAC G R+ R RT E + F E+ ++ FP P L LCKR+GC+L+L+++ RE RK PR +R PEPV H +RR FDRYCTSP AVDAL V I G VLDMCGG DAVA+ G +C V+TNDV +R Sbjct: 22 QIMQSSSSRR-----CSACLEC--GEDFRQTRARTGELLRSFVDEAGLADRFPGFQSGAAGPNLFALCKRSGCLLELYKKHEWARSRERVARKAKQTPRHSRTWSAAPEPVTHHKRRRFDRYCTSPEAVDALRDAVAITGCVLDMCGGPDDAVAMGFGGTCEVLTNDVSSR 185
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.010e-30 Identity = 85/185 (45.95%), Postives = 106/185 (57.30%), Query Frame = 1 Query: 109 CSACSRSDDGAGLRKPRPRTAERIHLFGGESEVSSMFPSL-SMAVNDPLL-LCKRAGCVLKLFEQ------RENKERKLHVQPRKNRRSVQVPEPVGHLQRRPFDRYCTSPAAVDALVAEVTIQGLVLDMCGGRTDAVALRLGVSCTVVTNDVRTRC-ADTDLDASCPNFPREYLEKA--GQQPD 630 CSAC + G R R RT E + F E+ ++ FP S+A LL LCKRAGC+L+L+++ RE RK PR +R PEPV H +RR DRYCT P AV+ L V I G VLDMCGG DAVA +C V+TNDV +R A T+LDAS +F R+ KA G+QPD Sbjct: 25 CSACL--EWGQDFRHTRARTGELVRSFVDEAGIADKFPGFQSIAAGTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSF-RDNFRKANPGKQPD 206
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Match: A0A6H5L2F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2F6_9PHAE) HSP 1 Score: 114 bits (284), Expect = 1.710e-27 Identity = 66/138 (47.83%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 157 RPRTAERIHLFGGESEVSSMFPSLSMAVNDP----LLLCKRAGCVLKLFEQRENKERKLHVQPRKNR--RSVQVPEPVGHLQRRPFDRYCTSPAAVDALVAEVTIQGLVLDMCGGRTDAVALRLGVSCTVVTNDVRTR 552 R RT + F + + FP L DP L+LCKRAGC+L+LF + +E + + R R + PEPV L+RR FDRYCTSPAA++AL+ V+I G VLDMCGG DAVA+RL +C V+TNDVR R Sbjct: 2 RERTGGNVRAFLEAAGMGDKFPGLKCG--DPSIGKLVLCKRAGCLLELFVLNQQRESRAPTERRAKRGPKWTCAPEPVKQLKRRCFDRYCTSPAALEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVRPR 137
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 114 bits (286), Expect = 3.320e-27 Identity = 66/133 (49.62%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 244 DPLLLCKRAGCVLKLFEQRENKERKLHVQPRKNR--RSVQVPEPVGHLQRRPFDRYCTSPAAVDALVAEVTIQGLVLDMCGGRTDAVALRLGVSCTVVTNDVRTRCAD-TDLDASCPNFPREYLEKA-GQQPD 630 D L+LCKRAGC+L+LF + ++ + + R R + PEPV L+RR DRYCTSPA ++AL+ V+I G VLDMCGG DAVA+RL +C V+TNDV R + T+LDAS +F ++L GQQPD Sbjct: 16 DKLVLCKRAGCLLELFVLNQQRDSRAPTKRRAKRGPKWTCAPEPVKQLKRRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPD 148
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Match: A0A6H5KD02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD02_9PHAE) HSP 1 Score: 111 bits (278), Expect = 7.000e-27 Identity = 69/150 (46.00%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 157 RPRTAERIHLFGGESEVSSMFPSLSMAVND--PLLLCKRAGCVLKLFEQRENKERKLHVQPRKNR--RSVQVPEPVGHLQRRPFDRYCTSPAAVDALVAEVTIQGLVLDMCGGRTDAVALRLGVSCTVVTNDVRTRCADTDLDA-SCPNF 591 R RT + F + V+ FP+L D L+LCKR GC+L+LF + KE + + R R + PEPV L+RR FDRYCTSPAA++AL+ +V+I G VLD CGG DA+ RL +C V+TNDVR R TDL S P+F Sbjct: 2 RERTGGNVRSFVEAAGVADKFPALKCGDPDVDKLVLCKRGGCLLELFVLNKQKESRAPSKRRAKRGPKWTCAPEPVKQLKRRCFDRYCTSPAALEALLGDVSISGCVLDTCGGAGDAIVTRLRDTCQVLTNDVRPR---TDLVVQSTPSF 148
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Match: A0A6H5KAM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM1_9PHAE) HSP 1 Score: 105 bits (263), Expect = 6.380e-25 Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 629 IVTSPPYKGAIKFVKAALEVAKHGVALKLPLSFMEPCGDRATWLKENSPSVCVFLRRSTYTPALVIVGEF 838 +V SPPYKGA+ FVKAAL VAK GVALKLPLSF+EPC DRA WL+EN PS+C+ + R+ Y PA V VGEF Sbjct: 39 VVASPPYKGALSFVKAALTVAKEGVALKLPLSFLEPCADRAGWLQENPPSLCMMMSRARYQPAHVRVGEF 108
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 109 bits (273), Expect = 1.130e-24 Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 2 Query: 629 IVTSPPYKGAIKFVKAALEVAKHGVALKLPLSFMEPCGDRATWLKENSPSVCVFLRRSTYTPALVIVGEF 838 +V SPPYKGA+KFVKAAL VAKHGVALK LSF+EPC DRA WL+ N P+VCVFLRR++YTP V++GEF Sbjct: 204 VVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLRRASYTPEHVMMGEF 273
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Match: A0A6H5JT40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT40_9PHAE) HSP 1 Score: 104 bits (259), Expect = 2.550e-24 Identity = 47/70 (67.14%), Postives = 58/70 (82.86%), Query Frame = 2 Query: 629 IVTSPPYKGAIKFVKAALEVAKHGVALKLPLSFMEPCGDRATWLKENSPSVCVFLRRSTYTPALVIVGEF 838 +V+SPPY+GA+ FVKAAL VAK GVALKLPLSF+EPC DRA WL+ N P++C+ + R+ Y PALV VGEF Sbjct: 40 VVSSPPYEGALAFVKAALTVAKEGVALKLPLSFLEPCADRAVWLQANPPALCMMMSRARYQPALVRVGEF 109
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Match: A0A6H5K9B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B9_9PHAE) HSP 1 Score: 103 bits (258), Expect = 5.010e-24 Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 2 Query: 521 VLSSQTT*GPG--VRTPTWMRVAPTFPGSTLRRPV-NNP--IVTSPPYKGAIKFVKAALEVAKHGVALKLPLSFMEPCGDRATWLKENSPSVCVFLRRSTYTPALVIVGEF 838 + S Q T G +RT +W R +T + NNP +VTSPPYKGA+ FVKAAL VAK VALKLPLSF+EPC DR WL+ N P++C+ + R+ Y PA V VGEF Sbjct: 19 IRSLQVTDSDGGCLRTRSWTRARRHLRTTTSQHTTENNPDWVVTSPPYKGALGFVKAALTVAKESVALKLPLSFLEPCADREGWLQANPPALCMMMSRARYQPAHVRVGEF 129
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Match: A0A6H5JSV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV3_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 4.350e-22 Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 629 IVTSPPYKGAIKFVKAALEVAKHGVALKLPLSFMEPCGDRATWLKENSPSVCVFLRRSTYTPALVIVGEF 838 +VT PPY GA+ FVKAAL VAK GVALKLPLSF+EPC DRA WL+ N P++C+ + R+ Y PA V VGEF Sbjct: 80 VVTRPPYNGALAFVKAALPVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAHVRVGEF 149 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6781.15534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6781.15534.1 >prot_L-elsbetiae_contig6781.15534.1 ID=prot_L-elsbetiae_contig6781.15534.1|Name=mRNA_L-elsbetiae_contig6781.15534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=198bp MEVCSACSRSDDGAGLRKPRPRTAERIHLFGGESEVSSMFPSLSMAVNDPback to top mRNA from alignment at L-elsbetiae_contig6781:762..2664+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6781.15534.1 ID=mRNA_L-elsbetiae_contig6781.15534.1|Name=mRNA_L-elsbetiae_contig6781.15534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1903bp|location=Sequence derived from alignment at L-elsbetiae_contig6781:762..2664+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6781:762..2664+ >mRNA_L-elsbetiae_contig6781.15534.1 ID=mRNA_L-elsbetiae_contig6781.15534.1|Name=mRNA_L-elsbetiae_contig6781.15534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1188bp|location=Sequence derived from alignment at L-elsbetiae_contig6781:762..2664+ (Laminarionema elsbetiae ELsaHSoW15)back to top |