mRNA_L-elsbetiae_contig6776.15530.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6776.15530.1
Unique NamemRNA_L-elsbetiae_contig6776.15530.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Match: A0A6H5JLV4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLV4_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 2.800e-56
Identity = 90/103 (87.38%), Postives = 96/103 (93.20%), Query Frame = 2
Query:  179 RVFYLDDFKDVLAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYRFPTEFSWYFWDESLRQYVPKNLAADATPRSPFFMREWPNAWEDIDQDVF 487
            RVFYLDDF+DVL GIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYRFPTEFSWYFWDES + Y+PK+L  DA PRSPFFMREWP AWED+DQDV+
Sbjct:  476 RVFYLDDFQDVLDGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYRFPTEFSWYFWDESAKDYIPKSLVEDAVPRSPFFMREWPVAWEDLDQDVW 578          
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Match: A0A7S0GCV4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCV4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.090e-19
Identity = 50/110 (45.45%), Postives = 66/110 (60.00%), Query Frame = 2
Query:  188 YLDDFKDVLAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYRFPTEF---------SWYFW--DESLRQYVPKNLAADATPRSPFFMREWPNAWEDIDQDV 484
            YLDDF  +L GI+ +YY M+D ++AS+GR F GTW STF+GYI R+RGYY    +          SWYF+  D        K++      R P +MRE+P AW DID+DV
Sbjct:  104 YLDDFAHLLEGINTNYYGMLDQLIASKGRVFFGTWFSTFSGYINRMRGYYTTKKKIGEYQDGLMTSWYFYPPDRKFEMVQYKSV------RLPIYMREFPTAWRDIDKDV 207          
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Match: A0A7S2DLB8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLB8_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.450e-18
Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 2
Query:  179 RVFYLDDFKDVLAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYRFPTEFSWYFWDESLRQYVPKN----LAADATPRSPFFMREWPNAWEDID 475
            R+ YL D+ + L GI P++Y MI+ IVA+QGRTF GT+ STFTGYITRLRGYY F    ++YF         PK+      +   P +P++ REWP AW+ ID
Sbjct:  407 RLRYLGDYMEHLDGISPNFYGMIEQIVAAQGRTFTGTFFSTFTGYITRLRGYYGFEDNKTFYF--------APKDKILAFHSQTWPTNPYYTREWPLAWDMID 501          
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Match: A0A7S1VYQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYQ0_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.800e-17
Identity = 46/107 (42.99%), Postives = 64/107 (59.81%), Query Frame = 2
Query:  182 VFYLDDFKDVLAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYY---------RFPTEFSWYFWDESLRQYVPKNLAADATPRSPFFMREWPNAWEDID 475
            +++LDDF D    ID +YY M+D IVAS+GR F GTW ST +GY+ R+RGYY         +  T  S+YF  +  +  + K        + PF+MRE+P AW+DID
Sbjct:  161 IYFLDDFADEYTDIDKTYYGMLDQIVASKGRVFYGTWWSTLSGYVNRMRGYYITKHKLDGYKDGTMQSYYFTPQERKMVMVKYHPV----KDPFYMREFPTAWKDID 263          
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Match: A0A7S4N1R2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1R2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 7.680e-17
Identity = 51/114 (44.74%), Postives = 69/114 (60.53%), Query Frame = 2
Query:  182 VFYLDDFKDVLAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGY---------YRFPTEFSWYFWDES----LRQYVPKNLAADATPRSPFFMREWPNAWEDIDQDV 484
            V +LDDFKD+LAGI+ +YY M+D +VAS+GR F GTW ST +GYI R+RGY         Y   T  S+YF  +     +RQY         + R P +MRE+P +W DID+ +
Sbjct:  523 VLFLDDFKDLLAGINTNYYGMLDQLVASKGRVFYGTWWSTLSGYINRMRGYHSAKHHLEGYEEGTLQSYYFIPDDRKLEMRQY--------RSVRLPIYMREFPTSWRDIDRGI 628          
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Match: A0A7S3PYB4_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYB4_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.910e-16
Identity = 45/104 (43.27%), Postives = 68/104 (65.38%), Query Frame = 2
Query:  182 VFYLDDFKDVLAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYRFPTEFSWYFWDESLRQYVPKNLAA--DATPRS-PFFMREWPNAWEDIDQDV 484
            V++LDDFK +  G++ +YY M+D ++AS+GRTF+GT+ STFTGYI R+RGY+    +   +   +    Y   +  A  + TP S PF+ RE+P AW DID+ +
Sbjct:  600 VYFLDDFKHLFKGLNTNYYGMLDQLIASRGRTFVGTYYSTFTGYINRMRGYHADQDKLEGHELGKIQSYYFTNSQTAMINFTPLSRPFWAREYPVAWRDIDKGI 703          
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Match: A0A6V2HVI9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HVI9_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 5.130e-16
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = 2
Query:  182 VFYLDDFKDVLAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYRFPTEF---------SWYFWDES----LRQYVPKNLAADATPRSPFFMREWPNAWEDIDQDV 484
            V++LDDFK +L GI+ +YY MID ++AS+GR F+GT+ STFTG+I R+RGYY    +          S+YF        +R YVP   A        F+ RE+P +W DID+ V
Sbjct:  250 VYFLDDFKHLLGGINTNYYGMIDQLIASKGRVFVGTYHSTFTGFINRMRGYYAEKHKLQGYEEGIIDSYYFAPIGQKFVMRDYVPVKQA--------FYAREFPASWRDIDKGV 355          
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Match: K0TH22_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TH22_THAOC)

HSP 1 Score: 87.4 bits (215), Expect = 5.280e-16
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 2
Query:  182 VFYLDDFKDVLAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYY---------RFPTEFSWYFWD----ESLRQYVPKNLAADATPRSPFFMREWPNAWEDIDQDV 484
            V +LDDFK +L GI+ +YY M+D +VAS+GR F GTW ST +GY+ R+RGYY            T  S+YF+       ++QY+P         + P +MRE+P +W DID+ +
Sbjct:  372 VAFLDDFKHLLKGINTNYYGMLDQLVASKGRVFYGTWWSTLSGYVNRMRGYYITKHKLEGHEDGTMESYYFFPLDRANQMKQYMPV--------KKPIYMREFPTSWRDIDRGI 477          
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Match: A0A7S3DMJ3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DMJ3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.840e-16
Identity = 49/113 (43.36%), Postives = 66/113 (58.41%), Query Frame = 2
Query:  161 NLMMASRVFYLDDFKDV--LAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYRFPTEFSWYFWDESLRQYVPKNLAADATP--RSPFFMREWPNAWEDIDQDVF 487
            +L +   V +LDD+ D+  L+G+DP+Y  MIDTIVAS+ R F GTW STF+GYI RLRGY+    + SWY        ++PK  A       +   +  EWP+ W  ID D F
Sbjct:  430 DLAVHYEVRFLDDYWDLAGLSGLDPNYMGMIDTIVASRARAFAGTWFSTFSGYINRLRGYHGMSMKDSWY-------SFLPKKTAVHEWEIVKHSAYAFEWPDGWVGIDSDTF 535          
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Match: A0A7S2KUL9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KUL9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.300e-15
Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 2
Query:  188 YLDDFKDV--LAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYRFPTEFSWYFWDESLRQYVPKNLAADATPRSPFFMREWPNAWEDIDQDVFV*S 496
            +L+DFK++  L  IDP+ + MIDT++AS+GR F+GTW STFTGYI R+RGY       S+Y   +  R+Y   N      P +    REWP +W  ID D+ V S
Sbjct:   98 FLNDFKEIANLEEIDPNLFGMIDTVIASRGRLFVGTWFSTFTGYINRMRGYNGMSGTTSYYSTPD--RKY---NTHKWVDPSNILIAREWPTSWVGIDGDIAVRS 197          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6776.15530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLV4_9PHAE2.800e-5687.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0GCV4_9STRA1.090e-1945.45Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2DLB8_9STRA3.450e-1848.54Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1VYQ0_9STRA5.800e-1742.99Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4N1R2_9STRA7.680e-1744.74Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3PYB4_9STRA4.910e-1643.27Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A6V2HVI9_9STRA5.130e-1642.98Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0TH22_THAOC5.280e-1641.23Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3DMJ3_9STRA5.840e-1643.36Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2KUL9_9STRA1.300e-1544.76Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6776contigL-elsbetiae_contig6776:7336..10071 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score202.6
Seed ortholog evalue1.3e-49
Seed eggNOG ortholog2880.D8LT53
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GDP-fucose protein O-fucosyltransferase
EggNOG OGs2B2NM@1,2S0D4@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size776
Cds size453
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6776.15530.1prot_L-elsbetiae_contig6776.15530.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6776 7619..10031 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816750.6320653-UTR-L-elsbetiae_contig6776:7335..76181622816750.6320653-UTR-L-elsbetiae_contig6776:7335..7618Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6776 7336..7618 -
1691683785.4982142-UTR-L-elsbetiae_contig6776:7335..76181691683785.4982142-UTR-L-elsbetiae_contig6776:7335..7618Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6776 7336..7618 -
1622816750.68935-UTR-L-elsbetiae_contig6776:10031..100711622816750.68935-UTR-L-elsbetiae_contig6776:10031..10071Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6776 10032..10071 -
1691683785.5513246-UTR-L-elsbetiae_contig6776:10031..100711691683785.5513246-UTR-L-elsbetiae_contig6776:10031..10071Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6776 10032..10071 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816750.648704-CDS-L-elsbetiae_contig6776:7618..76991622816750.648704-CDS-L-elsbetiae_contig6776:7618..7699Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6776 7619..7699 -
1691683785.515358-CDS-L-elsbetiae_contig6776:7618..76991691683785.515358-CDS-L-elsbetiae_contig6776:7618..7699Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6776 7619..7699 -
1622816750.6662169-CDS-L-elsbetiae_contig6776:8815..89541622816750.6662169-CDS-L-elsbetiae_contig6776:8815..8954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6776 8816..8954 -
1691683785.5272176-CDS-L-elsbetiae_contig6776:8815..89541691683785.5272176-CDS-L-elsbetiae_contig6776:8815..8954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6776 8816..8954 -
1622816750.6771631-CDS-L-elsbetiae_contig6776:9798..100311622816750.6771631-CDS-L-elsbetiae_contig6776:9798..10031Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6776 9799..10031 -
1691683785.538127-CDS-L-elsbetiae_contig6776:9798..100311691683785.538127-CDS-L-elsbetiae_contig6776:9798..10031Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6776 9799..10031 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6776.15530.1

>prot_L-elsbetiae_contig6776.15530.1 ID=prot_L-elsbetiae_contig6776.15530.1|Name=mRNA_L-elsbetiae_contig6776.15530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp
MCMCMPVATYCPWQRSDVGRHTRRRPPPTPTPTPAPTTNQNLMMASRVFY
LDDFKDVLAGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYR
FPTEFSWYFWDESLRQYVPKNLAADATPRSPFFMREWPNAWEDIDQDVFV
*
back to top

mRNA from alignment at L-elsbetiae_contig6776:7336..10071-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6776.15530.1 ID=mRNA_L-elsbetiae_contig6776.15530.1|Name=mRNA_L-elsbetiae_contig6776.15530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2736bp|location=Sequence derived from alignment at L-elsbetiae_contig6776:7336..10071- (Laminarionema elsbetiae ELsaHSoW15)
GTTTATTTTAACTGAATTGGTTTCTTGTTTTTGGGGGGGGATGTGCATGT GCATGCCCGTGGCAACGTACTGCCCGTGGCAACGTTCTGATGTAGGTAGA CACACCAGGCGCCGACCCCCCCCAACACCAACACCAACACCAGCACCAAC AACAAACCAAAACCTAATGATGGCGAGCAGGGTGTTCTACTTGGACGACT TCAAAGACGTCCTCGCGGGCATCGACCCGTCCTACTACCTCATGATCGAC ACCATCGTGGCCTCGCAAGGGAGGTGAGCAACCGAGTCTTCTGTGCCCCC AAGTCAAGCCTACCGTATATTACTATGACACAAGATACCACCCCCCTTCG ACATATTTTCTAACCTCGATTCCTCCTTAGCAAGAAGAGTGCCAGTGCCT AAAGGGGGTGGCGTTGGAAATATCTAGTCGAGGGCTGTCCGAAAATGTGT GGTTTGGTGCTTGTACCCTCTTCGTAATGGAGAAATTGAGCTCTAAAAGT CGGCCTAGGGGGGGTGGTATCTTGTGTCACCTACGGTAGGCCGGGAGACC TATGTATGAGACTGGTGCCGATGGGGCCCTTGGTTGCTGGGGAGGCGGCA AGCAGCAAGCTCCCTATAATCCCCGCGCCACCGTTGCGGAGAATCGGCAG CGAGACCCCCCTCCCCCCCGTGTATGTCTATGCTTGAACCTTGTATTTTG CATGCCTCGAGCACGTGGCGGACCCACCCCCCCCCCGTGCTCGAAATGGT ATGTCTATGCTTGAACCTTGTATACGCCGCACTAAATTCCCGCGCCACCG TTGCGGACAGTCGGCAGCGAGACCCCCCTCCCCCGCATGTCCCCGTGTAT GTCTATGCTTGAACTTTGCATATTGTATGCCTCAAGCACGTGGCGGAACC CCCACACCCCCGTGCTCGAAGCGGTATGTCTATGCTTGAACCTTGTATAC GCCTCACTATATCCCCGCGCCACCGTTGCGGAGAGTCGGCAGCGAGACCC CCCCCCCCCCCGTGTATGTCTATGCTTGAACATTGTACCTATATTTTATG CCTCAAACACGTGGCGGAACCCCCCCCCTCCATGTGGTCGAAATGGTACG GTATTTTTTTCCCACAGAACATTCATCGGGACGTGGCGAAGCACCTTCAC GGGCTACATCACGAGGTTAAGGGGGTACTACCGGTTCCCGACGGAGTTCT CGTGGTACTTCTGGGACGAGAGCTTGCGGCAGTACGTCCCGAAAAACTTG GCCGCGGTGAGAGGAGAAAACAACCCCCCGAAATACAGACACTCTTGAAG GGGAGACGGCGGTACAATAGGAATGGAGTCAGTCAGAGGGGAGTGGTTTT TAGTCGTCAATCGTGTGTGTGTGTGTGTGTGTGTGCGCGCATTTTTTATT TTTGCATCGGACAGCCCGCCGAAAACAAGAAGGTATTTTTTTCGGGCCAT GGGGGCCCCGCCCGCCCGCCCCGTGAGGGGAAGTCGTGAAGGAGGGATAA AGCCGGCGGGCTTGCGGCTCGAGCGTGTATATTTTTTTTTTTGGGGGGGG AGGGGGCGCTGTTTGTGCTTTTGAGCTTTGGTCCAACCATTCTTCTTGAG ACGCCAGTCTCAGCGGGACAAGGTGTGTGTGCAACTATAGATGGCCCTCT GGCGGCCTGCTTCCAATGTCATCATTTGTTACCTCGCGAACGTGCTCACT CATTCTTCTTGAGAGGCCAGTCTCAGTGAGATATATGTGTGTGCAACTCT GTTAAGTGATGCATCAAGTGCATGGGCTCTCTTCTCCTGCACGAGCTTAA GCTGCTGCTGCTGCTGCTGTTGCTGCTGTACGTGGCGATCACCGCCGACC CTTTCGTGTCCACTACTATTGCTGTGGCTGCCCGTTTAAATACAGTTTGT GGACCTCATGAAGACGGAACTCGCGATATGTATATACTTGTGTACATATA GGCGGCTAGCTGCATAAGGTGTTAGGTGCTTTTAGACGTTTTTTGTTTTT GTGCCAAACTATTTAGGAAGATGTCGCATAGGTTTTTTTCTTCTTTCCAC TATTGGCTTATTCATCGCCTGTCCCACTGGCCCCTTTCCTCCACTACGAT TGGCTGGACGACCCAACCGGGGTCACACAGGAGGGGGGGGGGGGGGGGGT GGCCCCCCTCCTGCTGCCTCTTGCCTGTGATGTTTTTAGTTGATGTTTTT TATACATACAAATGTCAGCAGTCTACGTCCAGTCTGCGAAGAAAGTGGTT CCAGAGGGAGAGATGTTTTTATATGTGACTGGCTCGCGGCAAATAAACAA ACAAAGACCGAGTCCACTAACTCGTGCACACCCCGCGCGTGCGCCCCCCC CATCCGCCCACTATTTATACAGGACGCTACTCCGAGGTCGCCCTTCTTCA TGCGGGAGTGGCCGAACGCTTGGGAAGACATTGACCAAGACGTGTTTGTG TGATCGTATATGTAGCGGTTGATTTACATCGCACGTACTTCTATGTACGC GCTGGCTTGGTGTTGGTCTTCTGGGAGCTTGCCTGTCTGTGCCATGTGTT CGTAGAGCGCGGCCGAGAGCCCCGAGGCGGCGGAAGCGGCACCGACCGCC CCGTGTCGACCGCTCCGTGTGAAAATTTAGAGTCGGGTACTGACTGCTGT GTAGGCGGCGACGGCGGCGGCGTTGGCAACGGGCGGGTCGCCGCGGGCAG GCAGTCTGCGAGCGGCGTGTTCGGCCTTGAGGAGGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6776:7336..10071-

>mRNA_L-elsbetiae_contig6776.15530.1 ID=mRNA_L-elsbetiae_contig6776.15530.1|Name=mRNA_L-elsbetiae_contig6776.15530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=906bp|location=Sequence derived from alignment at L-elsbetiae_contig6776:7336..10071- (Laminarionema elsbetiae ELsaHSoW15)
ATGTGCATGTGCATGCCCGTGGCAACGTACTGCCCGTGGCAACGTTCTGA
TGTAGGTAGACACACCAGGCGCCGACCCCCCCCAACACCAACACCAACAC
CAGCACCAACAACAAACCAAAACCTAATGATGGCGAGCAGGGTGTTCTAC
TTGGACGACTTCAAAGACGTCCTCGCGGGCATCGACCCGTCCTACTACCT
CATGATCGACACCATCGTGGCCTCGCAAGGGAGATGTGCATGTGCATGCC
CGTGGCAACGTACTGCCCGTGGCAACGTTCTGATGTAGGTAGACACACCA
GGCGCCGACCCCCCCCAACACCAACACCAACACCAGCACCAACAACAAAC
CAAAACCTAATGATGGCGAGCAGGGTGTTCTACTTGGACGACTTCAAAGA
CGTCCTCGCGGGCATCGACCCGTCCTACTACCTCATGATCGACACCATCG
TGGCCTCGCAAGGGAGAACATTCATCGGGACGTGGCGAAGCACCTTCACG
GGCTACATCACGAGGTTAAGGGGGTACTACCGGTTCCCGACGGAGTTCTC
GTGGTACTTCTGGGACGAGAGCTTGCGGCAGTACGTCCCGAAAAACTTGG
CCGCGAACATTCATCGGGACGTGGCGAAGCACCTTCACGGGCTACATCAC
GAGGTTAAGGGGGTACTACCGGTTCCCGACGGAGTTCTCGTGGTACTTCT
GGGACGAGAGCTTGCGGCAGTACGTCCCGAAAAACTTGGCCGCGGACGCT
ACTCCGAGGTCGCCCTTCTTCATGCGGGAGTGGCCGAACGCTTGGGAAGA
CATTGACCAAGACGTGTTTGTGTGAGACGCTACTCCGAGGTCGCCCTTCT
TCATGCGGGAGTGGCCGAACGCTTGGGAAGACATTGACCAAGACGTGTTT
GTGTGA
back to top