mRNA_L-elsbetiae_contig677.15525.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig677.15525.1
Unique NamemRNA_L-elsbetiae_contig677.15525.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Match: D8LQ59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ59_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 7.050e-127
Identity = 204/224 (91.07%), Postives = 218/224 (97.32%), Query Frame = 3
Query:   33 MTEEEDDSLDALEYELNQMGLSVEDLQPPEDGQFDRRAMARVESARIMSRRFIERDKVKSRISAQTKMYRRRLQESKHKKVQTWEKKTHRSPFLINLLAENERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRFTEALENHFEREAEVLREKHDIPPK 704
            M EEEDDSLDALEYELNQMGLSVEDLQPPEDGQFDRRAMARVESARIMSRRFIERD+VK ++SAQTK YRRRLQE KHKKVQ+WEKKTHRSPFLINLLAENERLDEEN+VRLKEE+RQAR+REKRKEEAKN+II+QALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKAD+RRRRFT+ALE+HFE+EAEVLREKH + PK
Sbjct:    1 MAEEEDDSLDALEYELNQMGLSVEDLQPPEDGQFDRRAMARVESARIMSRRFIERDRVKDKMSAQTKRYRRRLQEGKHKKVQSWEKKTHRSPFLINLLAENERLDEENKVRLKEEARQARIREKRKEEAKNNIILQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADYRRRRFTDALESHFEKEAEVLREKHGVAPK 224          
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Match: A0A6H5L000_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L000_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 6.940e-91
Identity = 173/244 (70.90%), Postives = 196/244 (80.33%), Query Frame = 3
Query:   33 MTEEEDDSLDALEYELNQMGLSVEDLQPPEDGQFDRRAMARVESARIMSRRFIERDKVKSRISAQTK------MYRRRLQESKHKKVQTWEKK----THRSPFLINLLAENERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRFTEALENHFEREAEVLREKHDIPPKATNTFSSFEG 734
            M EEEDDSLDALEYELNQMGLSVEDLQPPEDGQFDRRAMARVESARIMSRRFIERD+VK RISAQTK      + R+R   +  + +  ++ +    + RS  L+  +A+           +   +     REKRKEEAKN+II+QALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKAD+RRRRFT+ALE+HFE+EAEVLREKH + PKATNTFSSF+G
Sbjct:    1 MAEEEDDSLDALEYELNQMGLSVEDLQPPEDGQFDRRAMARVESARIMSRRFIERDRVKDRISAQTKGPVGGSVCRQRNHVTNKENLVDYKFRGSGLSLRSDLLVAWVADT------GTSEIAIMAVGLTTREKRKEEAKNNIILQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADYRRRRFTDALESHFEKEAEVLREKHGVAPKATNTFSSFDG 238          
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Match: A0A7S2V736_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V736_9STRA)

HSP 1 Score: 201 bits (511), Expect = 2.200e-59
Identity = 112/221 (50.68%), Postives = 161/221 (72.85%), Query Frame = 3
Query:   66 LEYELNQMGLSVEDLQPPEDGQFDRRAMARVESARIMSRRFIERDKVKSRISAQTKMYRRRLQESKHKKVQTWEKKTHRSPFLINLLAENERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRFTEALENHFEREAEVLREKHDIPPKATNTFSSF 728
            LE ++  +GLS  DL+ P DG+F++  M RVESA+I+S++ ++RD+VK  +    +  RR++ E + +K Q W+K+T +SPF ++L+AE E++DEENRVRL EE R+      RKE+AKN+II++AL+E+SDLEALRREKRAI EEE+ LKAL+DIEK+  HRK  +LAA   E+QR   K++ RR+ F +ALE H  +E   LR+K D+PP+  NTF S+
Sbjct:   11 LEQQMAALGLSTADLEYPPDGEFNKTIMTRVESAQILSKKMMDRDRVKQEMLETQESNRRKIYEQRRRKRQDWQKRTQKSPFHVDLVAETEKIDEENRVRLAEERRRMHAAAMRKEKAKNEIILKALSEASDLEALRREKRAIHEEEKRLKALLDIEKTKAHRKQDLLAAQLGERQRKQTKSEFRRKNFQDALEAHLAQETAALRQKLDVPPRPDNTFESY 231          
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Match: A0A7S2SUX2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUX2_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.530e-53
Identity = 109/224 (48.66%), Postives = 160/224 (71.43%), Query Frame = 3
Query:   63 ALEYELNQMGLSVEDLQPPEDGQFD-RRAMARVESARIMSRRFIERDKVKSRISAQTKMYRRRLQESKHKKVQTWEKKTHRSPFLINLLAENERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRFTEALENHFEREAEVLREKHDIPPKATNTFSSFE 731
            AL  ++  +GL+V+DL+    G  D +R +AR +SA++MS++FI+RD+VK R+  +    R++   ++ ++   W +K   SPF +NL+AE+ER +EE++VRL EE RQ R   +R+E AK DI+++AL E SDLEALRREKRAI+EEER LKAL+D+EK+   RKA  +AA RAEK RH  K ++RR+   EALE+   RE ++L++KH +PP +TNTF +FE
Sbjct:   14 ALAQDMESLGLTVDDLRV--SGPIDSKRTLARAQSAQVMSKKFIQRDRVKQRMMEEEARLRQQKMNARRRQEGKWNQKMQNSPFKVNLVAESERCEEEHKVRLTEEVRQQRQISRRQEAAKQDIVLRALQEESDLEALRREKRAIVEEERRLKALLDLEKTKKQRKADRIAARRAEKMRHETKKEYRRQENLEALEDIRVREVDILKQKHALPPPSTNTFDNFE 235          
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Match: A0A7S3XU70_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU70_HETAK)

HSP 1 Score: 169 bits (427), Expect = 1.460e-46
Identity = 102/223 (45.74%), Postives = 145/223 (65.02%), Query Frame = 3
Query:   63 ALEYELNQMGLSVEDLQPPEDGQFDRRAMARVESARIMSRRFIERDKVKSRISAQTKMYRRRLQESKHKKVQTWEKKTHRSPFLINLLAENERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRFTEALENHFEREAEVLREKHDIPPKATNTFSSFE 731
            +LE++L  +GLS  D + PE G+ DR  ++RVESA+++S++ ++R+K K  +    K                      +SPFL++L+ E ER+DEENRVRL  E R+ R    R+E+AKN+II++ALTE SDL+ALR EKRAI+EEER +KAL+DIEK+  HRK  ++AA  AE+ RHA K ++RR+ F +AL  H E EA  LR K  +PP+   TF  +E
Sbjct:   36 SLEHQLATLGLSRGDAEYPEGGRLDRNTISRVESAQVLSKKLMDREKYKQDMLEGDKQXXXXXXXXXXXXXXXXXXXXXKSPFLVDLVGETERIDEENRVRLAREYRRQREAAARQEQAKNEIILKALTEQSDLDALRAEKRAIMEEERRIKALIDIEKTKAHRKQDLIAAQLAERHRHATKKEYRRQDFQDALAKHLEEEASALRRKLAVPPRPQETFEEYE 258          
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Match: A0A1V9YPW2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPW2_9STRA)

HSP 1 Score: 150 bits (379), Expect = 7.530e-40
Identity = 104/219 (47.49%), Postives = 147/219 (67.12%), Query Frame = 3
Query:   39 EEEDDSLDALEYELNQMGLSVEDLQPPEDGQFDRRA-MARVESARIMSRRFIERDKVKSRISAQTKMYRRRLQESKHKK--VQTWEKKTHRSPFLINLLAENERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRFTEALENHFEREAEVLREK 686
            EE DD  D LE +  Q   S  +L       +D  A ++R ESA I S++F ER +VKS +    KM  RR+Q+ K ++  +Q W+ K  +SPF +NL+A+NERLDEENRVRL EE+R+ R  EK+ ++ KNDII++AL E+SDL+ALRREKR I+EEE+ LKAL+D+EK++ HRK  MLAA  AEK+R   K ++R R+  E +    +   ++L+EK
Sbjct:   19 EEHDDGSD-LEVDAMQRSFSPLNL-----SSYDSLAKLSRAESAEIFSKKFAERSQVKSSMIEDEKM--RRIQKEKRRQANIQKWQSKLAKSPFKVNLVADNERLDEENRVRLAEEARRLRALEKKTKQVKNDIILKALQETSDLDALRREKRVIMEEEKRLKALLDLEKTNSHRKMDMLAAQNAEKKRKQEKIEYRMRQRKEQIMTRDDEYKKLLKEK 229          
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Match: T0PWI7_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PWI7_SAPDV)

HSP 1 Score: 149 bits (376), Expect = 2.530e-39
Identity = 91/182 (50.00%), Postives = 133/182 (73.08%), Query Frame = 3
Query:  147 MARVESARIMSRRFIERDKVKSRISAQTKMYRRRLQESKHKK--VQTWEKKTHRSPFLINLLAENERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRFTEALENHFEREAEVLREK 686
            ++R ESA I S++F ER +VKS +  + K+  RRLQ+ K ++  ++ W+ K  +SPF +NL+A+NERLDEENRVRL EE+R+ R  EK+ ++ KNDII++AL E+SDL+ALRREKR I+EEE+ LKAL+D+EK++ HRK  MLAA  AEK+R   K + R ++  + L+   E   ++L+EK
Sbjct:   57 LSRAESAEIFSKKFAERSQVKSSMLEEEKL--RRLQKEKRRQANIEKWQSKLAKSPFKVNLVADNERLDEENRVRLAEEARRIRALEKKTKQVKNDIILKALQETSDLDALRREKRVIMEEEKRLKALLDLEKTNSHRKMDMLAAQNAEKKRKQEKIEFRMKQRKDQLQTRDEEYKKLLKEK 236          
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Match: A0A024TLE8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TLE8_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.360e-38
Identity = 89/184 (48.37%), Postives = 128/184 (69.57%), Query Frame = 3
Query:  135 DRRAMARVESARIMSRRFIERDKVKSRISAQTKMYRRRLQESKHKKVQTWEKKTHRSPFLINLLAENERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRFTEALENHFEREAEVLREK 686
            D + M+R ESA I S++++ER +VK+ +    +  R + +  +   +Q W+ KT +SPF +NL+A+NERLDEENRVR  EE+R+ R  E++  + KNDII++AL E+SDLEALRREKR IIEEE+ LKAL+D+EK++ HRK  MLAA  AEK+R   K ++R ++  E L    ER   +L+ K
Sbjct:   74 DSQRMSRSESAEIFSKKYVERHQVKAEMLHDERTKRLQKERRRQLHIQKWQSKTTKSPFKVNLVADNERLDEENRVRATEEARRLRELERKTRQVKNDIILKALQETSDLEALRREKRVIIEEEKRLKALLDLEKTNSHRKMDMLAAQNAEKRRKQEKIEYRMKQRKEQLSERDERYKALLKNK 257          
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Match: W4GJR2_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJR2_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.970e-38
Identity = 95/210 (45.24%), Postives = 139/210 (66.19%), Query Frame = 3
Query:   57 LDALEYELNQMGLSVEDLQPPEDGQFDRRAMARVESARIMSRRFIERDKVKSRISAQTKMYRRRLQESKHKKVQTWEKKTHRSPFLINLLAENERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRFTEALENHFEREAEVLREK 686
            LD LE  L  + +S   LQ           M+R ESA I S++++ER +VKS +    K  R   +  +   +Q W+ KT +SPF +NL+A+NERLDEENRVR+ E++R+ R  E++ ++ KNDII++AL E+SDL+ALRREKR IIEEE+ LKAL+D+EK++ HRK  MLAA  AEK+R   K ++R ++  + L +  ER  ++L+ K
Sbjct:   54 LDDLERSLTPLQVSDTSLQ----------RMSRSESAEIFSKKYVERHQVKSDMLLDEKTKRLNKERRRQLHIQKWQCKTTKSPFKVNLVADNERLDEENRVRMLEQARRVRELERKTKQIKNDIILKALQETSDLDALRREKRVIIEEEKRLKALLDLEKTNSHRKMDMLAAQNAEKRRKQEKIEYRMKQRKDQLHDRDERYKDLLKSK 253          
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Match: A0A485KYF9_9STRA (Aste57867_13431 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYF9_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.330e-37
Identity = 87/180 (48.33%), Postives = 127/180 (70.56%), Query Frame = 3
Query:  147 MARVESARIMSRRFIERDKVKSRISAQTKMYRRRLQESKHKKVQTWEKKTHRSPFLINLLAENERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRREKRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRFTEALENHFEREAEVLREK 686
            M+R ESA I S+++ +R +VK  +    K  R + ++ +   +  W+ KT +SPF +NL+A+NERLDEENRVRL EESR+ R  E++ ++ KNDII++AL E+SDLEALRREKR I+EEE+ LKAL+D+EK++ HRK  MLAA  AEK+R   K ++R +   + L+   ER   +L++K
Sbjct:   67 MSRAESAEIFSKKYAQRSQVKEEMLMDEKTKRIQKEKRRQANIVKWQSKTTKSPFKVNLVADNERLDEENRVRLMEESRRLRDLERKTKQVKNDIILKALQETSDLEALRREKRVIMEEEKRLKALLDLEKTNSHRKMDMLAAQNAEKRRKQEKIEYRMKVRKDQLQERDERYKSLLKDK 246          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig677.15525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ59_ECTSI7.050e-12791.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L000_9PHAE6.940e-9170.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V736_9STRA2.200e-5950.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SUX2_9STRA2.530e-5348.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3XU70_HETAK1.460e-4645.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1V9YPW2_9STRA7.530e-4047.49Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0PWI7_SAPDV2.530e-3950.00Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A024TLE8_9STRA2.360e-3848.37Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
W4GJR2_9STRA2.970e-3845.24Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A485KYF9_9STRA1.330e-3748.33Aste57867_13431 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig677contigL-elsbetiae_contig677:25025..27898 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score373.6
Seed ortholog evalue6.8e-101
Seed eggNOG ortholog2880.D8LQ59
Hectar predicted targeting categoryother localisation
EggNOG OGs2B6Z7@1,2S0NA@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_006040.1
Exons5
Model size1120
Cds size726
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816750.0310702-UTR-L-elsbetiae_contig677:25024..250561622816750.0310702-UTR-L-elsbetiae_contig677:25024..25056Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig677 25025..25056 +
1691683785.0695815-UTR-L-elsbetiae_contig677:25024..250561691683785.0695815-UTR-L-elsbetiae_contig677:25024..25056Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig677 25025..25056 +
1622816750.1206205-UTR-L-elsbetiae_contig677:27536..278981622816750.1206205-UTR-L-elsbetiae_contig677:27536..27898Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig677 27537..27898 +
1691683785.141744-UTR-L-elsbetiae_contig677:27536..278981691683785.141744-UTR-L-elsbetiae_contig677:27536..27898Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig677 27537..27898 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816750.0472007-CDS-L-elsbetiae_contig677:25056..252571622816750.0472007-CDS-L-elsbetiae_contig677:25056..25257Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 25057..25257 +
1691683785.0824401-CDS-L-elsbetiae_contig677:25056..252571691683785.0824401-CDS-L-elsbetiae_contig677:25056..25257Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 25057..25257 +
1622816750.0628767-CDS-L-elsbetiae_contig677:25930..260291622816750.0628767-CDS-L-elsbetiae_contig677:25930..26029Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 25931..26029 +
1691683785.0935516-CDS-L-elsbetiae_contig677:25930..260291691683785.0935516-CDS-L-elsbetiae_contig677:25930..26029Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 25931..26029 +
1622816750.0794473-CDS-L-elsbetiae_contig677:26548..266561622816750.0794473-CDS-L-elsbetiae_contig677:26548..26656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 26549..26656 +
1691683785.1042378-CDS-L-elsbetiae_contig677:26548..266561691683785.1042378-CDS-L-elsbetiae_contig677:26548..26656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 26549..26656 +
1622816750.0931122-CDS-L-elsbetiae_contig677:26961..272241622816750.0931122-CDS-L-elsbetiae_contig677:26961..27224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 26962..27224 +
1691683785.1166754-CDS-L-elsbetiae_contig677:26961..272241691683785.1166754-CDS-L-elsbetiae_contig677:26961..27224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 26962..27224 +
1622816750.107969-CDS-L-elsbetiae_contig677:27481..275361622816750.107969-CDS-L-elsbetiae_contig677:27481..27536Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 27482..27536 +
1691683785.128642-CDS-L-elsbetiae_contig677:27481..275361691683785.128642-CDS-L-elsbetiae_contig677:27481..27536Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 27482..27536 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig677.15525.1prot_L-elsbetiae_contig677.15525.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig677 25057..27536 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig677.15525.1

>prot_L-elsbetiae_contig677.15525.1 ID=prot_L-elsbetiae_contig677.15525.1|Name=mRNA_L-elsbetiae_contig677.15525.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=242bp
MTEEEDDSLDALEYELNQMGLSVEDLQPPEDGQFDRRAMARVESARIMSR
RFIERDKVKSRISAQTKMYRRRLQESKHKKVQTWEKKTHRSPFLINLLAE
NERLDEENRVRLKEESRQARLREKRKEEAKNDIIIQALTESSDLEALRRE
KRAIIEEERCLKALMDIEKSSGHRKAQMLAALRAEKQRHAAKADHRRRRF
TEALENHFEREAEVLREKHDIPPKATNTFSSFEGRKEEESY*
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mRNA from alignment at L-elsbetiae_contig677:25025..27898+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig677.15525.1 ID=mRNA_L-elsbetiae_contig677.15525.1|Name=mRNA_L-elsbetiae_contig677.15525.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2874bp|location=Sequence derived from alignment at L-elsbetiae_contig677:25025..27898+ (Laminarionema elsbetiae ELsaHSoW15)
CAACCAACAAGCGTGCTCTACTACTCAACAGGATGACCGAAGAAGAGGAC GACTCGTTGGATGCGCTGGAGTATGAGCTGAACCAAATGGGGTTGAGTGT TGAAGATTTGCAGCCCCCCGAAGACGGGCAATTTGATCGGCGTGCGATGG CGCGAGTGGAGTCTGCCCGAATCATGTCCCGCAGATTTATCGAGAGGGAC AAAGTCAAAAGCAGGATAAGCGCGCAGACCAAGGTAAGGCACTCCTTCTG GGGGATATAGGATGTAACACTGTGTGAGTGGATATAGGATGTGACACTGT GTGAGTGTGTTTAAAATTCGCCAAAGCCACAGACTGCAATGTGCATTTCC CAAACCTTGCTTGCAAGACTATCTAGAACTACATAATTCGTACCTAGTTG TAGCGAGACTAGAACAATACCTACGTACTGAGTATCTAGATTACACACTA CACCATTGTACATATTGTGAAGAACTTAAGATGATTATCTAAGCTTCAAG CCCACTCCACATACTACAGTATTTTCTAGCGACCCCGTCTACATTCGAAG GTAGGCGGTCTACAGGAGCACCAACCTTACATACACCGCATATTGTACAT GCGATTCCAGTTCATATGATAGTCTATCTCCATACTGATGTAGGCTTTAT GTAGTCTACATAGATATTCGTCTATATTTCCTTGACGTATTATTCACATA TGCGGGAGGAGGGGAGGTAGTGGCGACGACGAGGTAGCCAGCGAACGCTA CATGTGTGTTTCAGTGACAAAGAGAAAGCGTTAGCGCCACCAGCAATACG AGACTCGTGTACCCCATTTTCCATCCCCTGCATGTACGTCCTCGCCCGTA GCCGCACATATTACATTGTCAAACACACCGCCGTGCTATTTACCGTTCCG CATTAGATGTACCGGCGGCGGTTGCAGGAGAGTAAGCACAAGAAAGTGCA AACCTGGGAAAAAAAGACGCACAGGAGTCCGTTCCTCATCAACCTGCTTG CGGAGGTACGAAAACTACCTCATAGATTGATGATAAAGTGTCTGGGCTTC CATTATGTATCTAGTTAAGATTGCGACACGGACGCAGTCTGCGGTGTTCG ACTGCACAAAAACACATTGCAGCGGCGTACAGGCCGGTAGATGCATGAAT ATTCATGAAGTTTGGGTGTTAAATTAGGCTGTTACGTTTCAACCAATGGC CCAACCTGAGAAAGACTTGACCGATTGGTTGCTCCTGGAACTGATCAACT CCTGGAAGCCCTTCTACGTGTCTACCTTGCTCCATTCCTCTGCACTACGC TCTCTAGCGCTCTAAATTTCTCTTGGATGGACAGCTGGCTTCGATAGAGT GATCGAATGCTCTGTCACGCTGTGGACCCCGTGCTACGTGATACCGGTAT TTCGACAGTTTCATTCAACAAAAGGTCTGTTTGTTCTACCGCTGAGCGGC TTCAGCAAACCTGCAATTTCGTCGTTTATTGTATTCAATATGCATTTGGG ATTTTACTGGTCCGGCCTCATCAGAATGAACGACTTGACGAAGAGAACAG AGTGCGCCTGAAGGAGGAATCGCGCCAGGCAAGGCTGAGAGAGAAGCGCA AGGAGGAAGCCAAGAACGATATTATTATTCAGGTGCATCGCGTGTCTGTG CTGAACAAACACAAATGTATGCGTTGGCGAGTGCATAAGGAATGCTCTGC GCCAATGCGAATTCAAAAACACTCTGCAACATGGTCATCGAATCATAGGC TGCCGGTGGATTCCATGACAGTGCCGAGCGGCAACAAGTCAATCATACCG ACAGTAGGTTATGTCGGTGCGAAACTGCCTCATTGTCAAGTGTTCCCCAT CTGGTATATATCATGTTACTTCTAGTCTGCGGTGCTGAAGTAAACGGTAC TCTTTTCTTCCTTGATTGCGCGTGTTGGACCATGCAGGCGTTGACGGAAT CTTCCGATCTAGAGGCGCTCCGCCGAGAAAAGCGGGCCATAATTGAGGAG GAGCGGTGTTTGAAGGCGCTCATGGACATCGAGAAAAGCTCGGGGCACCG CAAGGCTCAGATGCTGGCGGCGCTGAGGGCTGAAAAGCAAAGGCACGCAG CAAAGGCCGACCACCGCCGCAGGCGATTCACGGAAGCCCTGGAGAATCAT TTCGAGAGAGAGGCGGAGGTGTTGCGGGAAAAGCACGACATACCCCCAAA GTGAGGACAGACGCCATGCCGACGAATCCAAAACCCCTTTTGCGCCCAAG AAAGAGAGTATCATTACCTTGGTCGCCGGAATCGGAAAGCGCTAAATTCC TGCAGGATTAGTCTAGGTCTCTTGTGTGGCTGGGCGTCGAATCAAGAGCT GCGCGCGGTCGTGGTTCGACTCCTATTCAGAGATACGATACGATGTACTG CTGCTCAACATCCTTTCTCCCACCCTCCCTCGACGTGTTCGTTCCGACCG CCGGCAGGGCCACAAACACCTTTTCGTCTTTCGAGGGGAGAAAAGAAGAA GAATCGTATTGAGCATCACAACCAGCAAGTGGCACGGACGTGCAGCGCGT TGGCTGCGTGTGCACGGACCGACGGTCGGAAGCCGCATCTTTTGTCAAGT TTTACGGGAAGAACCTGGCTCTCTTGATGCAGCGAGCACGCTTCTATCGA GCCACTGGTGTTGCTTGCGCAAATTATGTAAAGATAATGTTAGTTGATGT GGTTACGATACTGATGTGCCCCTTTTCTCGTCGGCTTTCCAGAAATGGTG GGGGTCTTGGTGCAGTCGTTGAGACAAAGTGTGGTCTTCAGCCTTTCCAC CTCAATAACTTGCTGCGCCCGAAACTTGGAACGTTACTTTTCGGATGAAC ACACGGTGGTGGTGTCGTCTGCAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig677:25025..27898+

>mRNA_L-elsbetiae_contig677.15525.1 ID=mRNA_L-elsbetiae_contig677.15525.1|Name=mRNA_L-elsbetiae_contig677.15525.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1452bp|location=Sequence derived from alignment at L-elsbetiae_contig677:25025..27898+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACCGAAGAAGAGGACGACTCGTTGGATGCGCTGGAGTATGAGCTGAA
CCAAATGGGGTTGAGTGTTGAAGATTTGCAGCCCCCCGAAGACGGGCAAT
TTGATCGGCGTGCGATGGCGCGAGTGGAGTCTGCCCGAATCATGTCCCGC
AGATTTATCGAGAGGGACAAAGTCAAAAGCAGGATAAGCGCGCAGACCAA
GATGACCGAAGAAGAGGACGACTCGTTGGATGCGCTGGAGTATGAGCTGA
ACCAAATGGGGTTGAGTGTTGAAGATTTGCAGCCCCCCGAAGACGGGCAA
TTTGATCGGCGTGCGATGGCGCGAGTGGAGTCTGCCCGAATCATGTCCCG
CAGATTTATCGAGAGGGACAAAGTCAAAAGCAGGATAAGCGCGCAGACCA
AGATGTACCGGCGGCGGTTGCAGGAGAGTAAGCACAAGAAAGTGCAAACC
TGGGAAAAAAAGACGCACAGGAGTCCGTTCCTCATCAACCTGCTTGCGGA
GATGTACCGGCGGCGGTTGCAGGAGAGTAAGCACAAGAAAGTGCAAACCT
GGGAAAAAAAGACGCACAGGAGTCCGTTCCTCATCAACCTGCTTGCGGAG
AATGAACGACTTGACGAAGAGAACAGAGTGCGCCTGAAGGAGGAATCGCG
CCAGGCAAGGCTGAGAGAGAAGCGCAAGGAGGAAGCCAAGAACGATATTA
TTATTCAGAATGAACGACTTGACGAAGAGAACAGAGTGCGCCTGAAGGAG
GAATCGCGCCAGGCAAGGCTGAGAGAGAAGCGCAAGGAGGAAGCCAAGAA
CGATATTATTATTCAGGCGTTGACGGAATCTTCCGATCTAGAGGCGCTCC
GCCGAGAAAAGCGGGCCATAATTGAGGAGGAGCGGTGTTTGAAGGCGCTC
ATGGACATCGAGAAAAGCTCGGGGCACCGCAAGGCTCAGATGCTGGCGGC
GCTGAGGGCTGAAAAGCAAAGGCACGCAGCAAAGGCCGACCACCGCCGCA
GGCGATTCACGGAAGCCCTGGAGAATCATTTCGAGAGAGAGGCGGAGGTG
TTGCGGGAAAAGCACGACATACCCCCAAAGCGTTGACGGAATCTTCCGAT
CTAGAGGCGCTCCGCCGAGAAAAGCGGGCCATAATTGAGGAGGAGCGGTG
TTTGAAGGCGCTCATGGACATCGAGAAAAGCTCGGGGCACCGCAAGGCTC
AGATGCTGGCGGCGCTGAGGGCTGAAAAGCAAAGGCACGCAGCAAAGGCC
GACCACCGCCGCAGGCGATTCACGGAAGCCCTGGAGAATCATTTCGAGAG
AGAGGCGGAGGTGTTGCGGGAAAAGCACGACATACCCCCAAAGGCCACAA
ACACCTTTTCGTCTTTCGAGGGGAGAAAAGAAGAAGAATCGTATTGAGGC
CACAAACACCTTTTCGTCTTTCGAGGGGAGAAAAGAAGAAGAATCGTATT
GA
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