mRNA_L-elsbetiae_contig677.15523.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig677.15523.1
Unique NamemRNA_L-elsbetiae_contig677.15523.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Match: D8LQ61_ECTSI (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ61_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 6.580e-75
Identity = 130/183 (71.04%), Postives = 149/183 (81.42%), Query Frame = 1 
Query:   19 RSRALSALIRHAKATFDKNTRDTGLVAPISPSPEDLIQTVFDNIGLGPNDVVLDLGCGDGRWVVAAALRGCTGRGLDLNEDLLQKGHDAAAGARVSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVVSIGFQMRGWTSAAAVVVGGLHAYIYRVPGRGN*S-GSTL 564
            R R  SAL+++AK TF ++TR+T LVAPISPSPE LI+TV D + L P+D+V+DLGCGDGRW++AAA RGC GRGLDLNEDLL+KG  AAA ARVSS VEL+  DIF A LAGSTVIIVYLFREGLAKMKEKL AEADPG RVVS+GFQ+RGW S A  VV GLHAYIYRV   G+ S G T+
Sbjct:    3 RKRTTSALVKYAKETFVEHTRETSLVAPISPSPESLIETVLDGLRLEPHDIVVDLGCGDGRWLLAAARRGCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFVAPLAGSTVIIVYLFREGLAKMKEKLEAEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYRVSDLGDSSSGRTI 185
[Close]
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Match: A0A7S1TVS2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVS2_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.160e-31
Identity = 69/163 (42.33%), Postives = 105/163 (64.42%), Query Frame = 1 
Query:    1 MDRAGSRSRALSALIRHAKATFDKNTRDTGLVAPISPSPEDLIQTVFDNIGLGPNDVVLDLGCGDGRWVVAAA-LRGCTGRGLDLNEDLLQKGHDAAAGARVSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVVSIGFQMRGWTSA 486
            MD+A  R+   +A+I+ +K  F     +T +VAPISP+P  ++Q V D + +  +DVVLDLGCGDGRW+VAAA   GC   G +L ++ + K  +A A A V + VE+   DIF   L+ ++V++ YLF + + ++K+K+ AE  P  RVVS+GF + GW +A
Sbjct:    1 MDKAAKRASLRAAIIQASKEAFAAR-ENTIIVAPISPTPLPIVQAVLDKVSVNADDVVLDLGCGDGRWLVAAAEAYGCRCVGYELEDERIAKCGEAIAAAGVGALVEVRRQDIFEVDLSEASVLVFYLFSDAIQRLKDKVSAEIAPACRVVSVGFAVPGWEAA 162
[Close]
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Match: A7HAR7_ANADF (Putative RNA methylase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) TaxID=404589 RepID=A7HAR7_ANADF)

HSP 1 Score: 109 bits (273), Expect = 1.190e-23
Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 1 
Query:   91 LVAPISPSPEDLIQTVFDNIGLGPNDVVLDLGCGDGRWVVAAALRGCTGRGLDLNEDLLQKGHDAAAGARVSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVVSIGFQMRGWTSAAAVVVGGLHAYIYRVPGR 540
            L  P  P+  +++  +    G+ P DVV DLGCGDGR V+AAA  G    G+DL+ + +++    A  A V S VE+   D+F A L  ++V+++YL+ E   +++ KL AE  PGTRVVS    M  W      VVGG    ++ +PGR
Sbjct:   54 LDVPYEPTAPEVVDAMLRLAGVSPGDVVYDLGCGDGRIVIAAAKLGARAVGVDLDPERVREARANARAAGVESRVEIREGDLFEADLRPASVVMLYLWPEVNLRLRPKLLAELRPGTRVVSHAHDMGDWEPRRTAVVGGARILLWTIPGR 203
[Close]
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Match: UPI001995B36F (Class I SAM-dependent methyltransferase n=1 Tax=Flavobacterium sp. TaxID=239 RepID=UPI001995B36F)

HSP 1 Score: 108 bits (269), Expect = 2.220e-23
Identity = 57/162 (35.19%), Postives = 89/162 (54.94%), Query Frame = 1 
Query:   58 ATFDKNTRDTGLVAPISPSPEDLIQTVFDNIGLGPNDVVLDLGCGDGRWVVAAALR-GCTGRGLDLNEDLLQKGHDAAAGARVSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVVSIGFQMRGWTSAAAVVVGGLHAYIYRVPGR 540
            AT    T+D  L  P  P+   ++  +     +GPNDV+ DLGCGDGR V+ AA + G TG+G+DLN + +++ +  A  A V+  V+ E AD+F    + ++V+ +YL      +++  L  +  PGTR+VS  F M  W     + V G   Y + VPG+
Sbjct:   21 ATAQSVTKDLKLDVPYVPTRPAVVDAMLKLAKVGPNDVLYDLGCGDGRIVITAAKKYGATGKGIDLNPERIREANQNAKDANVTDKVKFEQADLFKTDFSPASVVTLYLLPSVNLRLRPTLLKQLKPGTRIVSHDFDMGDWKPEQTIEVDGATIYFWTVPGK 182
[Close]
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Match: UPI001F568535 (methyltransferase domain-containing protein n=1 Tax=Anaeromyxobacter sp. SG22 TaxID=2925406 RepID=UPI001F568535)

HSP 1 Score: 106 bits (265), Expect = 8.290e-23
Identity = 63/162 (38.89%), Postives = 88/162 (54.32%), Query Frame = 1 
Query:   52 AKATFDKNTRDTGLVAPISPSPEDLIQTVFDNIGLGPNDVVLDLGCGDGRWVVAAAL-RGCTGRGLDLNEDLLQKGHDAAAGARVSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVVSIGFQMRGWTSAAAVVVGGLHAYIYRVP 534
            A A   +     G   P   +P +++  +    G+GP DVV DLGCGDGR V+ AA  RG  G G+D++  L+ +  +AAA A V+  VE    D+F   L  +TV+ +YLFR    +++ KL AE  PG RVVS  F M  W     + VGG   Y++ VP
Sbjct:   11 AAAQLAETPPSGGPEVPFVTTPLEVVDEMLRLAGVGPGDVVYDLGCGDGRIVIRAARDRGAHGVGVDVDGRLVAEAREAAARAGVADRVEFREQDLFGVDLRHATVVTLYLFRRLNLQLRPKLLAELRPGARVVSHQFDMGDWKPDRIIDVGGHRLYLWTVP 172
[Close]
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Match: UPI001CCF1817 (class I SAM-dependent methyltransferase n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CCF1817)

HSP 1 Score: 103 bits (258), Expect = 1.030e-21
Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = 1 
Query:  100 PISPSPEDLIQTVFDNIGLGPNDVVLDLGCGDGRWVVAAALR-GCTGRGLDLNEDLLQKGHDAAAGARVSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVVSIGFQMRGWTSAAAVVVGGLHAYIYRVPGR 540
            P  P+PED ++ +    G+GP D+V DLG GDGR V+ A  + G  G G+D++ + + + ++ A  A VS   E    D+F A +  +TV+ +YL      ++K KL AE  PGTRVVS  F M  W  A  V + G   Y++ VP R
Sbjct:   44 PFVPTPEDAVEQMLVLAGVGPRDIVYDLGSGDGRIVITAVKKYGARGVGVDIDPERIAEANENARTAGVSRRAEFRQGDLFDADIQDATVVTLYLLPTVNERLKPKLLAELKPGTRVVSHAFDMGDWKPAKEVEMNGRTLYLWIVPER 191
[Close]
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Match: A0A2U3KGG1_9BACT (RNA methylase n=1 Tax=Candidatus Sulfopaludibacter sp. SbA4 TaxID=2043165 RepID=A0A2U3KGG1_9BACT)

HSP 1 Score: 102 bits (255), Expect = 1.470e-21
Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 1 
Query:   97 APISPSPEDLIQTVFDNIGLGPNDVVLDLGCGDGRWVVAAALRGCTGRGLDLNEDLLQKGHDAAAGARVSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVVSIGFQMRGWTSAAAVVVGGLHAYIYRVPGR 540
            AP   +P  ++  +    G+  ND V DLGCGDGR V+AAA  G  G G+D+N + +++    A  A V      E  DIF A L G+TV+ +YL  +   +++ KL  E  PGTRV+S  F M  W      VV G   Y++ +P R
Sbjct:   31 APYVTTPARVVSAMLQLAGVTRNDTVYDLGCGDGRIVIAAARLGAHGVGIDINPERIREARTNARKAGVEGLARFEVGDIFDADLRGATVVALYLLPDLNFRLRPKLAKELKPGTRVLSHAFDMGDWMPEKKRVVDGSPIYLWTIPAR 178
[Close]
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Match: A0A7C5I7K5_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Candidatus Solibacter sp. TaxID=2068625 RepID=A0A7C5I7K5_9BACT)

HSP 1 Score: 103 bits (256), Expect = 1.480e-21
Identity = 52/150 (34.67%), Postives = 87/150 (58.00%), Query Frame = 1 
Query:  109 PSPEDLIQTVFDNIGLGPNDVVLDLGCGDGRWVVAAALRGCTGRGLDLNEDLLQKGHDAAAGARVSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVVSIGFQMRGWTSAAAVVVGGLHAYIYRVPGRGN*SGS 558
            P+P++++  +     +GPNDV+ DLGCGDGR V++AA  G  G G+D+  + +++ ++ A  A V+  V+  N+D F   ++ +TV+ +YL    + K+  KL  E  PGTR+VS  +Q   W     + + G   Y++ VP R + S S
Sbjct:   37 PTPQEVVDEMLKFAQVGPNDVLYDLGCGDGRIVISAARLGARGVGIDITPERIKESNENAKAAGVTERVKFINSDFFQVDVSPATVVALYLLPVTMDKLLPKLQRELKPGTRIVSHNYQFSEWKPDKEMHLDGRILYLWTVPPRDSGSNS 186
[Close]
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Match: A0A2E6LS94_9GAMM (SAM-dependent methyltransferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6LS94_9GAMM)

HSP 1 Score: 105 bits (261), Expect = 2.280e-21
Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 1 
Query:   91 LVAPISPSPEDLIQTVFDNIGLGPNDVVLDLGCGDGRWVVAAALRGCTGRGLDLNEDLLQKGHDAAAGARVSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVVSIGFQMRGW 477
            LVAP   SP++ ++ + D    GP D V+DLG GDGR V+ AALRG  G G++L+ +L++     A  A V       + D+F A L G+T++ +YL  E   +++ KL AE  PGTRV+S  F M  W
Sbjct:   29 LVAPYVNSPQEDVELMLDMADAGPGDYVIDLGAGDGRIVITAALRGAAGHGVELDRELVELARRRARAAEVDDRAAFRHGDVFEADLRGATIVTLYLMPEVNLRLRPKLLAELPPGTRVLSNSFDMGDW 157
[Close]
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Match: UPI001F581EBA (methyltransferase domain-containing protein n=3 Tax=Anaeromyxobacter TaxID=161492 RepID=UPI001F581EBA)

HSP 1 Score: 103 bits (256), Expect = 3.130e-21
Identity = 55/152 (36.18%), Postives = 81/152 (53.29%), Query Frame = 1 
Query:   91 LVAPISPSPEDLIQTVFDNIGLGPNDVVLDLGCGDGRWVVAAALRGCTGRGLDLNEDLLQKGHDAAAGARVSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVVSIGFQMRGWTSAAAVVVGGLHAYIYRVPGRGN 546
            L  P  PS  +++  +     +   DVV DLGCGDGR V+AAA RG    G+DL+   +++  + A  A V   VEL   D+F   L  +TV+++YL+ E   +++ KL  E  PGTRVVS    M  W      V GG   +++ +P R +
Sbjct:   68 LDVPYEPSAPEVVDRMLALADVRAGDVVYDLGCGDGRIVIAAAKRGARAVGVDLDPQRIREARENARAAGVEEKVELREGDLFETDLGPATVVMLYLWPEVNLRLRPKLLRELRPGTRVVSHAHDMGDWEPQRTAVAGGARVFLWIIPERAS 219
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig677.15523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ61_ECTSI6.580e-7571.04Methyltransf_25 domain-containing protein n=2 Tax=... [more]
A0A7S1TVS2_9STRA2.160e-3142.33Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A7HAR7_ANADF1.190e-2338.67Putative RNA methylase n=1 Tax=Anaeromyxobacter sp... [more]
UPI001995B36F2.220e-2335.19Class I SAM-dependent methyltransferase n=1 Tax=Fl... [more]
UPI001F5685358.290e-2338.89methyltransferase domain-containing protein n=1 Ta... [more]
UPI001CCF18171.030e-2138.51class I SAM-dependent methyltransferase n=1 Tax=Cy... [more]
A0A2U3KGG1_9BACT1.470e-2137.84RNA methylase n=1 Tax=Candidatus Sulfopaludibacter... [more]
A0A7C5I7K5_9BACT1.480e-2134.67Class I SAM-dependent methyltransferase n=1 Tax=Ca... [more]
A0A2E6LS94_9GAMM2.280e-2141.09SAM-dependent methyltransferase n=1 Tax=Gammaprote... [more]
UPI001F581EBA3.130e-2136.18methyltransferase domain-containing protein n=3 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig677contigL-elsbetiae_contig677:1592..6838 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score249.6
Seed ortholog evalue1.1e-63
Seed eggNOG ortholog2880.D8LQ61
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Methyltransferase domain
EggNOG OGs2CYTN@1,2S6D0@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-26_006020.1
Exons5
Model size2194
Cds size549
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig677.15523.1prot_L-elsbetiae_contig677.15523.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig677 1592..5193 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816749.61593-CDS-L-elsbetiae_contig677:1591..17251622816749.61593-CDS-L-elsbetiae_contig677:1591..1725Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 1592..1725 +
1691683784.7077482-CDS-L-elsbetiae_contig677:1591..17251691683784.7077482-CDS-L-elsbetiae_contig677:1591..1725Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 1592..1725 +
1622816749.6368902-CDS-L-elsbetiae_contig677:2173..23391622816749.6368902-CDS-L-elsbetiae_contig677:2173..2339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 2174..2339 +
1691683784.7213368-CDS-L-elsbetiae_contig677:2173..23391691683784.7213368-CDS-L-elsbetiae_contig677:2173..2339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 2174..2339 +
1622816749.6516674-CDS-L-elsbetiae_contig677:2563..26531622816749.6516674-CDS-L-elsbetiae_contig677:2563..2653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 2564..2653 +
1691683784.7334485-CDS-L-elsbetiae_contig677:2563..26531691683784.7334485-CDS-L-elsbetiae_contig677:2563..2653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 2564..2653 +
1622816749.669215-CDS-L-elsbetiae_contig677:3205..32741622816749.669215-CDS-L-elsbetiae_contig677:3205..3274Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 3206..3274 +
1691683784.7498262-CDS-L-elsbetiae_contig677:3205..32741691683784.7498262-CDS-L-elsbetiae_contig677:3205..3274Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 3206..3274 +
1622816749.6833704-CDS-L-elsbetiae_contig677:5103..51931622816749.6833704-CDS-L-elsbetiae_contig677:5103..5193Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 5104..5193 +
1691683784.760642-CDS-L-elsbetiae_contig677:5103..51931691683784.760642-CDS-L-elsbetiae_contig677:5103..5193Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig677 5104..5193 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816749.6962795-UTR-L-elsbetiae_contig677:5193..68381622816749.6962795-UTR-L-elsbetiae_contig677:5193..6838Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig677 5194..6838 +
1691683784.7754579-UTR-L-elsbetiae_contig677:5193..68381691683784.7754579-UTR-L-elsbetiae_contig677:5193..6838Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig677 5194..6838 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig677.15523.1

>prot_L-elsbetiae_contig677.15523.1 ID=prot_L-elsbetiae_contig677.15523.1|Name=mRNA_L-elsbetiae_contig677.15523.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp
MDRAGSRSRALSALIRHAKATFDKNTRDTGLVAPISPSPEDLIQTVFDNI
GLGPNDVVLDLGCGDGRWVVAAALRGCTGRGLDLNEDLLQKGHDAAAGAR
VSSSVELENADIFHAQLAGSTVIIVYLFREGLAKMKEKLGAEADPGTRVV
SIGFQMRGWTSAAAVVVGGLHAYIYRVPGRGN*
back to top

mRNA from alignment at L-elsbetiae_contig677:1592..6838+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig677.15523.1 ID=mRNA_L-elsbetiae_contig677.15523.1|Name=mRNA_L-elsbetiae_contig677.15523.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5247bp|location=Sequence derived from alignment at L-elsbetiae_contig677:1592..6838+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGATCGAGCAGGGTCTCGAAGCCGTGCGTTATCCGCCTTGATTCGGCA
TGCAAAGGCAACGTTCGATAAGAACACCCGCGACACAGGATTGGTTGCCC
CCATAAGCCCTTCCCCTGAAGATTTGATTCAAACGTGAGCTTATGTGTAG
ACGAAGACTAGTCTATAGATAATACCCACATTATGTAGAAGAGTCTTGGA
TATTTCGGTCGAGTCGAGACTACAAAGCTTCACCACCCCTTGTAGATGGC
GATATTGCCAGCCGTGACTCTGCTGTGTTTTTTTTTCATTTGATGTAGCT
GTAGTTGCGTTGTCGAGTCACGGCGGCAGGAAATATTGTAGTCGTTGTGA
TTGAAGCTGCGGGGCTCTCTCTGTACTCTGTCGCGCGACAGGCAGGTAGG
TACCTGGTAGGTACAGGTCGGGCTCTCTGCCTCTCTCCCACAGATGGCGA
TTATTTTCCCGCACCGCGCGCTCTGCAAGTTAGTGCTGGGCGTTGCCGTG
GAGAGTATGTCCTTGCTGGGAATACAACTACACACATGATCCTGAACGCG
GTGACTCTGCCTGCCACGTCGTGTGGTGGCAGCGTGTTCGACAATATCGG
GCTGGGCCCGAACGACGTTGTGCTCGATCTTGGGTGTGGCGACGGGCGCT
GGGTAGTTGCTGCGGCGCTGAGAGGATGCACGGGCCGTGGCTTGGATCTT
AATGAAGATTTGTTGCAGAAAGGACACGATGCAGCTGCCGGAGCAAGGGT
GAGCAGCTATTCTCTTCTACTTCTTCTGTTTCATGCTAGCAATTCGTTCC
CGAAGACCGTCCGTTGCTGCTACTACATAGAAGTAGATACATACCGTAAC
GTCGCTGATTTGCAGAATACAAACATCATCAAATACCAAGCAAAGACTTT
TTCGTTGACCACCGTACGGCATTAGGATGAGATAGAAGAGGCTCAGCGTT
TTGGCACACGCTGCCTCCACAGGTGTCCTCCTCGGTCGAGCTGGAAAACG
CGGATATATTTCATGCGCAACTAGCAGGGAGCACGGTGATCATCGTCTAC
CTGTTCCGAGAGGTATGTATGTCAAAGCGACCTTCCAGCGGAAAATGGAA
CAACAGCCGCGATTCCAATGCATCGTCCGCCGCAAGCGCCTCACCTCGCG
TTCCTCAAATATGCATGTGTGTTGATGTAATAGCCCAATTCTGCTACGAA
ATTCCCTCCCCCCACTCCATCGAATATTTATGAACTCTTGGGCGGTTGCT
CGTCGAGCTCCTCTCAAATCGAGGCTCTTAACAGAGCCGTTCGAAGACTA
TCATGCCCGCGGGCAGCTGAAGCTCCTGAAGCCATTTTGGAGTGCTTTCA
TGCACGGCGGGAACGTCCAAGTACGGTACCCCTTCGAGAATTCACGTTTT
ATCTATAGAAGAACCGTTCGAACGTACACATGCACGCAGTACTCGCGACA
GGTCAGGCCCGTGTCCGCGATCTACGCCAGTGTGCACGGTTCTTCGTGCT
TCCTGGCGAGCAGCCTCGAGCGCATATTTTTGCTCTTGTTTTTGTTGCTC
AATGTGCAACCCTTCCCACTGCTGCTACTGCGTTCTCCGCATGTGTGTCG
ACCTGGCCTTTCAGGGCCTGGCCAAGATGAAGGAGAAACTGGGAGCAGAA
GCCGACCCTGGTACCCGGGTAGTGTCAATTGGGGTGAGTGTGAGTTGAGC
AGCGAGTGCAGCAAACGAATACATAGCGGTAGAGTGGGTATGTTCAACAC
CATTTGTATAGGCATCGTTTTTATGAGCAGTGCGTCCTCTGCCCCCACGG
TTTTGCTGGCCTGTACTAGTTAGCGAATAATGAGCCGCACACACCCACCC
AATTCAACCCAATCCAACCCGACCAGCACCGGCTCAATACCTTGCAGTAG
TCTGACCAACCCACCCGCGGACCCACGGCCCCCACCCAACCCAACCTAAC
CCACCCGCGGATCCACGGCCCCAACCCCACCCAACCCAACTCAACCCAAC
TCAACTCAACCCAACAAACACAACCCAACCCGCGGATCCACGCACCCACC
ACAACACAACACAACCGGCACACCGTTGGTGGCCCGAGACCATTTACACG
TGGCCACTTTGCCGTGGCGGGGGTGCGAAATGCCACAGGATTCATCCCAA
CCCTCTTGGAGAGCATACTGGCCACGTTTGAAATCTATGATGACCCCAAT
ACGCTGTGGTAGTGCAGCTCCTCGTAGAGCCGACAGCAGCAGTGTTGACG
TAGGATGGGTTTTGAAGGACGATTCCATACAGTATAGATACATGTATTCA
CAAACGTAGTCAACAGAACTTAGTGTAGAGGCGGGAGCGAACGATTGTAG
CACACTCCGCCCGGGTTCAACCCGGTAAGGCCTTTTTTGTTCGAAAAAAG
TCGTTTTATTTTGTGTAGGTATATTTTCAGTTTTATTCGAAACATCAACC
CTGAGGTACTTACTCCCTCTACAGAGGGCCCGAATCCTCTACAGGGCCCA
TATTTCCTGTGCCCTGGTAGGGGTGCGAAAGGCTACAGGGTTCATGTGAC
CCCAACCCTCTGGCTGAGCAAAGTACCCACGTGTGTTTTCTCGCACGCAC
ACACCGCGGCGCGTGCGTTTTTTGGAAATTTGTATCCTTCTGTGCTGTCA
GTACCATGTCACCCCTGCATGACCAGTGAACTCATGCTACCCCTCCCCCG
CCAGTGTTTATTGCTCCTTCATCCTCCTAGCGTTCGTGCTGTGTTTGTTT
CCTCTCTCGGTTGTCTCAATACTCTGCCTCAATCTCGGCGGGCTTGGCGG
GACTATCAATAATACATGATCTCCGGTTGGTATCCCTCCATGTGAACTCC
CGGGGGTGGTTCGCTGCTGTCCCGGGTCTCCGAAAAAAGTTTTTACAAAC
GACCGTGAAAAACGGCCATCTCTTGTCGGAGCAAATCTCTACCAGCGTGT
CAACCAGTTCCCTATTTTTCTTCCCCCTCAGAAGACAACAGATCGTCAAT
CGGTGCTCTGTGGATGTTGTTCTGATCAAAAAGGAGGGCGATTTCGGTCG
CCCGTTAATCAAGTTTGGGGGCGCTTGACGCGATCGGAGGGACTTTTGGT
CGATATTTAGAACCTTTTTTTTTCCTCCTGGGGGATGAAGGGAAAAAAGG
TCGCGGCTTCGCCGCTCCGCGGCTCATTACAACTGCTTGGACAGGGTGCG
GGTGGATACCTCCGCTCGTGGAATCTTTCGGGAATGGTATCCGAGCTCGG
GCGTCTTGTAGGGTCTCTGGGCGTAGTTTTTTGTATTCCCAGTAAAAAAA
TTGCGTCGAATGGTGACGTGTTTCTTCTCCATAAATAGTAAGCTGGCTTG
GTCAGCCTACTTGAGCAATGTCGAACTCGAAACAAACCGCAGCCTGCATA
TCAAGAAATAATGTCCACACTTGCGCGTCCGATATGTAGTAGTGCGAGTG
GTTGATCAACCTTGCCTGCCCGCACGCCCATACTCGCGCCTGCTTCAACC
GCTCGCTCAAAGTTCCAGATGAGAGGTTGGACCTCGGCGGCCGCAGTCGT
GGTCGGGGGGTTGCATGCGTATATCTACCGCGTGCCCGGTAGAGGTAACT
AGTCGGGTTCGACGCTACACTGATGGCGCCGTCGTTGTCTATGAACAAGT
TGGTAGTCTTCAGACGATGCGACGAAAGAAGCTACCGCCTTAAGCTTTGC
GCAGATTGGTGACGCCTTTGAAGAACCGAGGCCGAATACGTGGCGCTCGG
AGATAAATAGTTAATCAGTATGTGGCGTCTTTCATCGTGCCATCTCTTTG
AAAGAAGACTTATCATCAAGGTGTTCGCAGGCAACGACGGGGCTGTCGAT
CTAGAGCCGAACCCACTCCGTTCTGCGAGTCCGGAGCACACTGGTGTGCG
TTTCCATCTTCGTTCGGGAGTTGGTTTCGTCCGGCACGTTTGCAATCGAA
TAGGTTCAGACGAAGGAACAACATGTAGATATATTAACAGAGGCGCTTGT
AGGCCCTATCCCCAGGGAGCACAGAGATTTCCTGATGAATCTATATGATG
AGTGATTTTTCTTTGTGTTCCACTTTTGTAAGGTCTGTTTTGGGTCACAA
GTATTACGGTAGCAGTTTTAATGTTTTCGTTCAGCGCCAAGTGGTAACTA
TTAACGTATGAGTCCCGCGAAGAAAGGCGATGCCATCTGGCATTGCTGTC
GCGGTCTGTGAAGTGATGGCAGCAGTAGGGGGGCACTTTTACCGAAGGAA
CAGGGTTCCTTGCGATCTCTGGTATTCTCGTCGTCGCCTTGGTTCTCATC
TTGGGTGGCGTGGTTGCTGTGATAATTTATTTGAGGAACAAGATTCCATC
TGGGTTTTATGTTGCAAGGGGTTTTGATCCGGTGGCCGGGTTCCCCTTGT
ACGCCGCTTTGAATAGTTCATAGCGTTTGTTTGCCTTTGTATGGTTCGTC
ACTGTATTGTGAAGAGCCAAGGAGTTTGTCGGTGTGACTCGAAATGAAGC
TTGCACGTGTCGGTTGGTAGTAGGACTACTGTGGCTTTATTGGGCTGTTC
AGCTACAAAGTGCTGGGGATCTTGAGTGTGTGTGAGACAGTGACGAGCCG
TGCTCTCGCTCTCTCTCTGTGTTTCCTCTCCCCACACACCTCGCGGGTGT
AAGGCAACCAATACTACACGGAATGAACATTGCAGCCATTCGATTGTGTG
TCGTTCGGCGTTGATAGACGTGGTTGCAGCGCCAACAGGCTCTTTTTAGC
AGTGGCGGTGCAATCGCACGGTAAATATAGGTGGAGTATTTTGCGTTGCC
GAGTTCGCCGTATCGGGAACGGAAAGCAGTAAAACCCGCCGAGGTTGTTC
GGCTCCGAAAAAATTGGCGAACATTTGTCTTCGGGTGCGCATGCGCGGGG
GTCTGCAAGCCATTTCCTCCCCGAGTACGACAAATACTCTGTCTGGCTTT
GAACGCCCAGAGGAGCAATGCCCGTCAGCATTGGAACCGGTGCGTCTGGT
GCTGGCGACACCAGGTTGGCCTGTTCCGCCAAAACCAGGTAGTCAGTCCT
GCTCCGATGCTGGCGGGCACTGTTGCTTCGTGGTCTCAACACTGGAGGAG
AAGTAGTCGCGCTCGGAGAGTAAATTGCACTGTTCGTGTGGGCACGGAAC
AGGTCTTGGTCGTTTTTCATGTTTCGCAGATATGGTTTGTGTACTACTTT
GTGGAGTATAGTCTATATACTTCGGTAAAAGCTTTGATAATTCACGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig677:1592..6838+

>mRNA_L-elsbetiae_contig677.15523.1 ID=mRNA_L-elsbetiae_contig677.15523.1|Name=mRNA_L-elsbetiae_contig677.15523.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig677:1592..6838+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGATCGAGCAGGGTCTCGAAGCCGTGCGTTATCCGCCTTGATTCGGCA
TGCAAAGGCAACGTTCGATAAGAACACCCGCGACACAGGATTGGTTGCCC
CCATAAGCCCTTCCCCTGAAGATTTGATTCAAACATGGATCGAGCAGGGT
CTCGAAGCCGTGCGTTATCCGCCTTGATTCGGCATGCAAAGGCAACGTTC
GATAAGAACACCCGCGACACAGGATTGGTTGCCCCCATAAGCCCTTCCCC
TGAAGATTTGATTCAAACCGTGTTCGACAATATCGGGCTGGGCCCGAACG
ACGTTGTGCTCGATCTTGGGTGTGGCGACGGGCGCTGGGTAGTTGCTGCG
GCGCTGAGAGGATGCACGGGCCGTGGCTTGGATCTTAATGAAGATTTGTT
GCAGAAAGGACACGATGCAGCTGCCGGAGCAAGGCGTGTTCGACAATATC
GGGCTGGGCCCGAACGACGTTGTGCTCGATCTTGGGTGTGGCGACGGGCG
CTGGGTAGTTGCTGCGGCGCTGAGAGGATGCACGGGCCGTGGCTTGGATC
TTAATGAAGATTTGTTGCAGAAAGGACACGATGCAGCTGCCGGAGCAAGG
GTGTCCTCCTCGGTCGAGCTGGAAAACGCGGATATATTTCATGCGCAACT
AGCAGGGAGCACGGTGATCATCGTCTACCTGTTCCGAGAGGTGTCCTCCT
CGGTCGAGCTGGAAAACGCGGATATATTTCATGCGCAACTAGCAGGGAGC
ACGGTGATCATCGTCTACCTGTTCCGAGAGGGCCTGGCCAAGATGAAGGA
GAAACTGGGAGCAGAAGCCGACCCTGGTACCCGGGTAGTGTCAATTGGGG
GCCTGGCCAAGATGAAGGAGAAACTGGGAGCAGAAGCCGACCCTGGTACC
CGGGTAGTGTCAATTGGGTTCCAGATGAGAGGTTGGACCTCGGCGGCCGC
AGTCGTGGTCGGGGGGTTGCATGCGTATATCTACCGCGTGCCCGGTAGAG
GTAACTAGTTCCAGATGAGAGGTTGGACCTCGGCGGCCGCAGTCGTGGTC
GGGGGGTTGCATGCGTATATCTACCGCGTGCCCGGTAGAGGTAACTAG
back to top