mRNA_L-elsbetiae_contig6763.15520.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Match: D7FQA0_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA0_ECTSI) HSP 1 Score: 157 bits (398), Expect = 3.750e-43 Identity = 77/90 (85.56%), Postives = 80/90 (88.89%), Query Frame = 2 Query: 440 CAGHTGARRDCQAILITDKGSVVSLSRPHRATDADEKARIRSKGGKVVQGRVMGVLEPSRVIGDYDIKRAWPGCVIAEPYVSVRSLPYTR 709 CA + G DCQAILITDKG++VSLSRPHRA D DEKARIRS GGKVVQGRVMGVLEPSRVIGDYDIKR WPGCVIAEPYV VRSLPYTR Sbjct: 187 CAANVG---DCQAILITDKGAIVSLSRPHRAVDLDEKARIRSNGGKVVQGRVMGVLEPSRVIGDYDIKRTWPGCVIAEPYVLVRSLPYTR 273
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Match: A0A0G4IW20_PLABS (PPM-type phosphatase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IW20_PLABS) HSP 1 Score: 72.8 bits (177), Expect = 1.670e-11 Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 2 Query: 413 WRGNDDVTSCA--GH---TGARRDCQAILITDKGSVVSLSRPHRATDADEKARIRSKGGKVVQGRVMGVLEPSRVIGDYDIKRAWPGCVIAEPYVSVRSLP 700 W V +CA GH + DC + + G L H ATDA E ARIR+ GG + GR++G+L PSR IGD D++ PG I +P+V R LP Sbjct: 127 WTAGACVAACALRGHHFAAASAGDCAVVYHDEHGEFGLLCHRHVATDAAEAARIRACGGFIRDGRILGILAPSRGIGDTDVRDNCPGATIPDPHVQSRILP 227
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Match: A0A7S0ZZP2_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZZP2_NOCSC) HSP 1 Score: 70.9 bits (172), Expect = 2.420e-11 Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 2 Query: 467 DCQAILIT-DKGSVVSLSRPHRATDADEKARIRSKGGKVVQGRVMGVLEPSRVIGDYDIKRAWPGCVIAEP 676 DC+A + D S+ LS+ H A+ EKARI GG V GRV G LEPSR +GD D+KR PG V+AEP Sbjct: 38 DCRACYVDLDLLSLTWLSKDHDASSPSEKARIEMVGGYVQNGRVGGALEPSRTLGDLDVKRLMPGAVLAEP 108
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Match: A0A836CMW2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW2_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.590e-10 Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 440 CAGHTGARR--DCQAIL-ITDKGSVVSLSRPHRATDADEKARIRSKGGKVVQGRVMGVLEPSRVIGDYDIKRAWPGCVIAEPYVSVRSLP 700 C GH DC A+L + S V LS HR+ +E RI + GG V+ R GVLEPSR IGD D+KR G V A+PY+ +P Sbjct: 85 CEGHVCVANVGDCLAVLYLPGADSHVDLSVAHRSRQPEEARRIEAAGGLVINNRAFGVLEPSRSIGDLDLKRHCRGAVTADPYIREVVIP 174
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Match: A0A7S3XLZ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLZ6_HETAK) HSP 1 Score: 68.9 bits (167), Expect = 2.950e-10 Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 2 Query: 434 TSCAGHTGARRDCQAILITDKGSVVSLSRPHRATDADEKARIRSKGGKVVQGRVMGVLEPSRVIGDYDIKRAWPGCVIAEPYVSVRSL 697 T C + G DC +L G + S+ HR T E RI G + GR+ G+L PSR +GD D++ A+PG V+AEPYV+V L Sbjct: 104 TICFANVG---DCLGVLYNSTGKIKLPSQVHRCTIQKEIQRIAKAGAPLRDGRLGGLLVPSRSVGDLDVRLAYPGAVVAEPYVAVLEL 188
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Match: A0A7S2D475_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D475_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.010e-9 Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 467 DCQAILI----TDKGSVVS---LSRPHRATDADEKARIRSKGGKVVQGRVMGVLEPSRVIGDYDIKR 646 DC+A+L D G+ S ++ HRATD EKARI GG V+ GRVMGVLEPSR IGD+D+KR Sbjct: 18 DCRALLCFCETDDYGTAESHREITVAHRATDPAEKARITQAGGFVLNGRVMGVLEPSRAIGDWDLKR 84
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Match: A0A7S1XI08_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XI08_9RHOD) HSP 1 Score: 64.3 bits (155), Expect = 2.620e-8 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 449 HTGARRDCQAILITDKGSVVSLSRPHRATDADEKARIRSKGGKVVQGRVMGVLEPSRVIGDYDIKRAWPGCVIAEPYVSVRSL 697 H + D +A+L T+ G V L+R HRAT DE A++ +GG V+ RV GVL SR IGD+ +K + AEP V R++ Sbjct: 205 HVASVGDSKAVLATNDGRAVELTRDHRATSDDEVAQVEGRGGFVLMNRVNGVLAVSRAIGDHSLKPV----ISAEPDVLSRAV 283
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Match: A0A0G4H0Q8_VITBC (PPM-type phosphatase domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H0Q8_VITBC) HSP 1 Score: 64.3 bits (155), Expect = 3.080e-8 Identity = 38/94 (40.43%), Postives = 51/94 (54.26%), Query Frame = 2 Query: 467 DCQAILIT-----------DKGSV-----VSLSRPHRATDADEKARIRSKGGKVVQGRVMGVLEPSRVIGDYDIKRAWP-GCVIAEPYVSVRSL 697 DC+A ++ D G V V LSR RA+D DE RI+ GG+V+ GRV G+LEPSR IGD+D+K P G + P + V + Sbjct: 267 DCRAAWVSLADSNYRNTAADNGGVGVFRSVYLSRDFRASDKDEIRRIQRLGGRVMNGRVAGILEPSRTIGDFDVKNTQPAGAISTVPEIRVHQM 360
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Match: A0A023BDG2_GRENI (Protein phosphatase 2C n=1 Tax=Gregarina niphandrodes TaxID=110365 RepID=A0A023BDG2_GRENI) HSP 1 Score: 60.1 bits (144), Expect = 7.570e-7 Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 467 DCQAILIT-----------DKGS-------VVSLSRPHRATDADEKARIRSKGGKVVQGRVMGVLEPSRVIGDYDIKRAWP-GCVIAEPYV 682 DC+A ++T + GS V S+ HR++ E+ARIR++GG GRV GVLEP+R IGD+D+K + P G +IA P V Sbjct: 264 DCKAAILTLEDADSPAASLEMGSGSQQQFQVTWFSKEHRSSAPKERARIRARGGWFRHGRVGGVLEPTRTIGDFDVKASQPAGVLIATPEV 354
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Match: A0A7J6MYS8_PERCH (PPM-type phosphatase domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MYS8_PERCH) HSP 1 Score: 58.9 bits (141), Expect = 1.540e-6 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 2 Query: 482 LITDKGSVVSLSRPHRATDADEKARIRSKGGKVVQGRVMGVLEPSRVIGDYDIKRAWPGCVIA 670 +I+D G ++ SR +AT E+ RI + GG+V GRV GVLEPSR +GD+D+K P VI+ Sbjct: 204 IISD-GGIIWTSRDMKATAPYEQRRISNAGGRVTDGRVAGVLEPSRTVGDFDVKMRLPPDVIS 265 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6763.15520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6763.15520.1 >prot_L-elsbetiae_contig6763.15520.1 ID=prot_L-elsbetiae_contig6763.15520.1|Name=mRNA_L-elsbetiae_contig6763.15520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp MKYRVEKSWPAHEWSASRAVAALSGRPAHEVCAAPSHARFRDIRPNQTKAback to top mRNA from alignment at L-elsbetiae_contig6763:7728..10663- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6763.15520.1 ID=mRNA_L-elsbetiae_contig6763.15520.1|Name=mRNA_L-elsbetiae_contig6763.15520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2936bp|location=Sequence derived from alignment at L-elsbetiae_contig6763:7728..10663- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6763:7728..10663- >mRNA_L-elsbetiae_contig6763.15520.1 ID=mRNA_L-elsbetiae_contig6763.15520.1|Name=mRNA_L-elsbetiae_contig6763.15520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig6763:7728..10663- (Laminarionema elsbetiae ELsaHSoW15)back to top |