mRNA_L-elsbetiae_contig6763.15519.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6763.15519.1
Unique NamemRNA_L-elsbetiae_contig6763.15519.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 1.900e-48
Identity = 228/438 (52.05%), Postives = 279/438 (63.70%), Query Frame = 3
Query:  324 STGPLLEQMAGN-FSKLHQAVSAGSTERTLALLESGQCDIDGL-GHGKTPLMWSATDGYSRVTRILLNKGADVSAVGDGDFTALHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPRLAFVQGPYEILPLDMAAQSGRVGATRELIRQVGIEGCGGETGGKQALCAAARGGHVNILAILTDAGVVDAGGALRHAAGYGHEAAVKFLLQQKGRSTKRYESSYVNNSTSDCGQTAMVCAIGFVEMSISPYPRIVRLLVDAGADTASTLRVTDAEGTVLLDETLLAGTTRLIREKKVGTKDATGEHLNKLEEIRRLLQQVGAVHAVSFLWPSNASSSVRTAEGTGTAKTIASP---PVMK--LPLLRRSAGARRKLLTTLFKWVV 1616
            S  PLL+Q      +KLH+A   GST  T A+L +G  DIDG    G TPLM +  + +  V  ILL+KGA VSA+ D   TALH         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    NP L  V   ++ LPLD AAQ+GR+G   EL+++ GI GCGG TGG  AL  AA   H++++  LT AGVVD G AL  A  +GH   VKFLLQQ+   T   +S+YV+     CG+T ++C I  V ++ S  P++VRLLVDAGADT S +R T   GT+ +  T L+  T  +R K    K    E L +LE IRRLL +V AVHA S+LW +        A GT   +T +S    P ++  LP+LRR A  R  +  +L ++ V
Sbjct:    2 SLPPLLQQSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQN-GTPSEKSAYVSRPRDPCGRTPLICNID-VGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAV 437          
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 9.280e-47
Identity = 163/429 (38.00%), Postives = 217/429 (50.58%), Query Frame = 3
Query:  363 SKLHQAVSAGSTERTLALLESGQCDIDGLG-HGKTPLMWSATDGYSRVTRILLNKGADVSAVGDGDFTALHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPRLAFVQ----GPYEILPLDMAAQSGRVGATRELIRQVGIEGCGGETGGKQALCAAARGGHVNILAILTDAGVVDAGGALRHAAGYGHEAAVKFLLQQKGRSTK-RYESSYVNNSTSDCGQTAMVCAIGFVEMSISPYPRIVRLLVDAGADTASTLRVTDAEGTVLLDETLLAGTTRLIREKKVGT-KDATGEHLNKLEEIRRLLQQVGAVHAVSFLWPSNASSSVRTAEGTGTAKTIASPPV----MKLPLLRRSAGARRKLLTTLFKWVV 1616
            ++LH+AV  GS E T A+L  G  +ID    +G TPLM +  +G+SR+ ++L+ KGA+VS      FTALH                                         XXXXXXXXXXXXX                               N     +Q    G    +PLD+AA+ G     RELI+++GIEGC   + G  AL  AA   H++I+AILT+AGVVD G AL  AAG GHEA+VKFLL+ + +      E +Y+N    +     +VC  G      S  PRIVR+LVDAGADT S ++V + +G V+ ++T LA T   +R+K V   K AT EHL +LE I RLL +V AVHAVS+LWPS A    R  E      T   PP+    + LP+L+R    R  L+ TL ++ V
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQG----CFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATE------TDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSV 525          
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 7.950e-44
Identity = 198/414 (47.83%), Postives = 249/414 (60.14%), Query Frame = 3
Query:  363 SKLHQAVSAGSTERTLALLESGQCDID-GLGHGKTPLMWSATDGYSRVTRILLNKGADVSAVGDGDFTALH-QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPRLAFVQGPYEILPLDMAAQSGRVGATRELIRQVGIEGCGGETGGKQALCAAARGGHVNILAILTDAGVVDAGGALRHAAGYGHEAAVKFLLQQKGRSTKRY-ESSYVN----NSTSDCGQTAMVCAIGFVEMSISPYPRIVRLLVDAGADTASTLRVTDAEGTVLLDETLLAGTTRLIREKKVGTKDATGEHLNKLEEIRRLLQQVGAVHAVSFLWPSNASSSVRTAEGTG---TAKTIASPPVMK-LPLLRRSA 1571
            + LH A   GSTERT  LL +G  DI+ G  +  TPL+++A+ G+S V  ILL+KGA+VS V D   TALH  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                  NP +     P  +LPLD AA++G +   RELI++VGIEGCGG++ G+ AL  A  G  V  +A+LT AGVVD G AL  +AG G EA+VK+LLQ      K Y   +YVN    N T+    +  VC +       S +PR+ RLLV+AGADT + LR T++ G VL   T L  T  ++++KKV     + + L +LE IRRLL QV AVHA S+LWPS++    R  +      TA   A+P + + LP+LRR A
Sbjct:    2 NSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLP-TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHA---KHYGPGAYVNVRDRNGTTPLLSSIYVCGVD----EQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRA 407          
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 1.510e-40
Identity = 190/427 (44.50%), Postives = 236/427 (55.27%), Query Frame = 3
Query:  354 GNFSKLHQAVSAGSTERTLALLESGQCDID-GLGHGKTPLMWSATDGYSRVTRILLNKGADVSAVGDGDFTALHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NPRLAFVQGPY--EILPLDMAAQSGRVGATRELIRQVGIEGCGGETGGKQALCAAARGGHVNILAILTDAGVVDAGGALRHAAGYGHEAAVKFLLQQKGRSTKRYESSYVNNSTSDCGQTAMVCAIGFVEMSISPYPRIVRLLVDAGADTASTLRVTDAEGTVLLDETLLAGTTRLIREKK--VGTKDATGEHLNKLEEIRRLLQQVGAVHAVSFLWPSNASSSVRTAEGTGTAKTIASPPVMKLPLL--RRSAGARRKLLTTLFKW 1610
            G  ++LH A   GS E T  +L SG  DID G  +G T LM ++  GY+R+  ++LNKGA VS            XXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXX                                 +P L  V  P     LPLD AA++G      ELIRQVGI+GCGG +GG +AL  AA+  ++NI+ ILT+AGVVD G AL  AAGYG E  +KFLL+Q        E++YVN      G T ++  I          PR+VRLLV+AGADT S + V +  G   +  T L  T   +R+K   VG   A+ E L+KLE IRRLL +V AVHAVS+LWPS+ S+  R A   GT +T A    + LP+L  RR A  R+  L  L ++
Sbjct:   13 GPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRG-GVTPLLWGIQHYR------PRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAA-ARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRY 431          
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 1.530e-39
Identity = 221/406 (54.43%), Postives = 257/406 (63.30%), Query Frame = 3
Query:  390 GSTERTLALLESGQCDID-GLGHGKTPLMWSATDGYSRVTRILLNKGADVSAVGDGDFTALHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPRLAFVQGPY--EILPLDMAAQSGRVGATRELIRQVGIEGCGGETGGKQALCAAARGGHVNILAILTDAGVVDAGGALRHAAGYGHEAAVKFLLQQKGRSTKRYESSYVNNSTSDCGQTAMVCAIGFVEMSISPYPRIVRLLVDAGADTASTLRVTDAEGTVLLDETLLAGTTRLIREKKVGTKDATGEHLNKLEEIRRLLQQVGAVHAVSFLWPSNASSSVRTAEGTGTAK-----TIASPPVMKLPLLRRSAGARR 1583
            GS +R  ALL  G  DI+ G   G TPLM +   G SRVT+ LL KGA+VS VGDG       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   N  LA V  P     +PLD+A Q G     REL  Q+G+ GCGG +GG ++L  A     V+I+ ILT  GVVD G AL  AA    E +VKFLLQ +        + YVNN+    G+T +VC I   E   S  PRI R L+DA ADT ST+ VT +       +T L   T  +R+ KVG K+AT E L  L+ I RLL QV AVHAVS+LW    SS  R +   G A      TIA P + ++P + R+   +R
Sbjct:   10 GSADRVDALLSMGSVDINQGNPKGWTPLMLAVEKGLSRVTKSLLGKGANVSVVGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGG----AWYVNNTLDPFGRTPLVCTI---EACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWR---SSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKR 405          
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.300e-37
Identity = 225/418 (53.83%), Postives = 266/418 (63.64%), Query Frame = 3
Query:  354 GNFSKLHQAVSAGSTERTLALLESGQ-CDID-GLGHGKTPLMWSATDGYSRVTRILLNKGADVSAVGDGDFTALHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPRLAFV---QGPYEILPLDMAAQSGRVGATRELIRQVGIEGCGGETGGKQALCAAARGGHVNILAILTDAGVVDAGGALRHAAGYGHEAAVKFLLQQKGRSTKRYESSYVNNSTSDCGQTAMVCAIGFVEMSISPYPRIVRLLVDAGADTASTLRVTDAEGTVLLDETLLAGTTRLIREKKVGTKDATGEHLNKLEEIRRLLQQVGAVHAVSFLWPSNASSSVRTAEGTGTAKTIASPPVMKLPLLRRSAGARRKLL 1592
            G  ++LH A   GS ER LALL S    D++ G   G TPLM + T+G+ RV RILLN GA++S + D    AL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +P L  V    G    LPLD+A         REL++++GIE CGGE+ G  ALC A  G HV I+A+L  AGVVD G AL  AA  G+EA+VKFLL+Q         S+YVN   +  G T ++  I     S     RIVRLLVDAGADT +  R+T  +G  +   T L     L+ EKK   K  TGE  + L+   RLL QV A HA+S++WP+ + S  R       A+    P  + LP+ RR  G RR LL
Sbjct:   13 GPMNELHLAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNK-LNRFGLTPLLENITCGHCSA----RIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLLLEKKA--KGDTGEEPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRRQRRAEA---PVRLTLPMTRRDTGTRRALL 420          
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 4.010e-37
Identity = 115/257 (44.75%), Postives = 150/257 (58.37%), Query Frame = 3
Query:  867 LPLDMAAQSGRVGATRELIRQVGIEGCGGETGGKQALCAAARGGHVNILAILTDAG-VVDAGGALRHAAGYGHEAAVKFLLQQKGRSTKRYESSYVNNSTSDCGQTAMVCAIGFVEMSISPYPRIVRLLVDAGADTASTLRVTDA----EGTVLLDETLLAGTTRLIREKKVGTKDATGEHLNKLEEIRRLLQQVGAVHAVSFLWPSNASSSVRTAEG---TGTAKTIASPPVMKL-PLLRRSAGARRKLLTTLFKW 1610
            +PL+MAA  G     RE+IRQVGI GCGG +GG +AL  AA   H+  +A+L DAG VVD G AL  AA  G   AVKFLL+++         +YVN +    G+T ++CA+  V       P+IVRLLVDAGA+T   + VT      E T    ET LA TTRL+RE +V  + AT E L +L++ R LL +  AVHAVS+LW S     +  A G   T TA T  + P+  + P+LRR  G R  LL TLF++
Sbjct:  184 VPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADA----DAYVNGTRDPYGRTPVMCAVD-VGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKT---SETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRY 432          
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 7.330e-37
Identity = 120/277 (43.32%), Postives = 158/277 (57.04%), Query Frame = 3
Query:  852 GPYEILPLDMAAQSGRVGATRELIRQVGIEGCGGETGGKQALCAAARGGHVNILAILTDAGVVDAGGALRHAAGYGHEAAVKFLLQQKGRSTKRYESSYVNNSTSDCGQTAMVCAIGFVEMSISPYPRIVRLLVDAGADTASTLRVTDAEGTVLLDETLLAGTTRLIREKKVGTKDATGEHLNKLEEIRRLLQQVGAVHAVSFLWPSNASSSVR-TAEGTG--TAKTIASPPVMKLPLLRRSAGARRKLLTTLFKWVVMHVTLLGRRYLIDVAPSLQ 1673
            G    LPLD+AAQ+G      ELIRQVGI+GCGG +GG+ AL  AA    ++I+AILTDAGVVD G AL  AAGYG EA +KFLL+Q  R  K  + +   N+ +  G T+++  I          PR+V+LLV+AGADT S + + +  G      T L  T  L+  +    K  T E  NKLE IRRLL +  AVHAVS+LWPS+  +    TA+GTG  TA + A+ P + L + RR+ G R+ LL  L ++      L G     D    LQ
Sbjct:  183 GKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQ-ARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCR------PRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSA--KPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRG-RKGLLAALLRYSSKLEALTGMENEKDWRKRLQ 449          
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 1.120e-35
Identity = 207/396 (52.27%), Postives = 253/396 (63.89%), Query Frame = 3
Query:  435 DIDGLGHGKTPLMWSATDGYSRVTRILLNKGADVSAVGDGDFTALHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPRLAFVQ--GPYEILPLDMAAQSGRVGATRELIRQVGIEGCGGETGGKQALCAAARGGHVNILAILTDAGVVDAGG-ALRHAAGYGHEAAVKFLLQQKGRSTKRYESSYVNNSTSDCGQTAMVCAIGFVEMSISPY-PRIVRLLVDAGADTASTLRVTDAEGTVLLDETLLAGTTRLIREKKVGTKDATGEHLNKLEEIRRLLQQVGAVHAVSFLWPSNASSSVRTAEGTGTAKTIASPPVMKLPLLRRSAGARRKLLTTLFKW 1610
            D  G+  G  P++ +A  G S++ R L+ +G DVS   D  FTALH    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     NP L +         +PL++AAQ+GR     EL+R+ GI  CGG +GG  AL  AA  G V+I+++L DAGVVD  G AL  A G G EAAV FLL+Q+    +R+++SYVN +  D G TA++ +  F      P  PRI R LVDAGADT S +++        ++ T L         +  G   AT E L +LE  RR+L +V AVHAVS++WPS+A    R A    TAK   +     LP+LRR AG R  L  TLF++
Sbjct:   12 DKYGISRGPIPIINAAGRGLSKIVRKLVEQGHDVSLTNDAGFTALHTAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQ---EERWQTSYVNIARDDDGLTALLWS--FRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRY 402          
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 1.280e-35
Identity = 217/427 (50.82%), Postives = 270/427 (63.23%), Query Frame = 3
Query:  339 LEQMA-GNFSKLHQAVSAGSTERTLALLESGQCDID-GLGHGKTPLMWSATDGYSRVTRILLNKGADVSAVGDGDFTALHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPRLAF-VQGPYEILPLDMAAQSGRVGATRELIRQVGIEGCGGETGGKQALCAAARGGHVNILAILTDAGVVDAGGALRHAAGYGHEAAVKFLLQQKGRSTKRYESSYVNNSTSDCGQTAMVCAIGFVEMSISPYPRIVRLLVDAGADTASTLRVTDAEGTVLLDETLLAGTTRLIREKKVGTKDATGEHLNKLEEIRRLLQQVGAVHAVSFLWPSNASSSVRTAEGTG-TAKTIASPPVMKLPLLRRSAGARRKLLTTLFK 1607
            L+++A G  ++LH+A   GS++RT +LL  G+ DID G   G TPLM++A +G+S V ++LLN+GA +  V D D+     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P L   +      +PLD AA +G +   REL+++ GI GC G + G  AL  AA   H++++A+L DAGVVD G AL      G E A+KFLL+QKG  T R  ++Y +      G T ++ A+     S    PR+VRLLVDAGAD    +RV D  G      T L   TR + EK V    AT + L  L   RRLL QV  VHA S+LW  +A       +    T  T   P   +LP++ R +  R   L  +F+
Sbjct:    4 LQRLARGPRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTAR--TTYASTPRDGRGHTPLLSAVTTGPCS----PRVVRLLVDAGADATLAVRVPDGFGRST-KYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFR 423          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6763.15519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK3_ECTSI1.900e-4852.05EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FT11_ECTSI9.280e-4738.00EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LJF9_ECTSI7.950e-4447.83EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KJA9_9PHAE1.510e-4044.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K037_9PHAE1.530e-3954.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY91_ECTSI2.300e-3753.83EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
D7G1H7_ECTSI4.010e-3744.75EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
A0A6H5KQV0_9PHAE7.330e-3743.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVU3_ECTSI1.120e-3552.27EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LL76_ECTSI1.280e-3550.82EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6763contigL-elsbetiae_contig6763:2412..5266 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score193.0
Seed ortholog evalue3e-46
Seed eggNOG ortholog2880.D7FVK3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size2855
Cds size1338
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6763.15519.1prot_L-elsbetiae_contig6763.15519.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6763 2759..4096 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816749.207345-UTR-L-elsbetiae_contig6763:2411..27581622816749.207345-UTR-L-elsbetiae_contig6763:2411..2758Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6763 2412..2758 +
1691683784.3662732-UTR-L-elsbetiae_contig6763:2411..27581691683784.3662732-UTR-L-elsbetiae_contig6763:2411..2758Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6763 2412..2758 +
1622816749.2287924-UTR-L-elsbetiae_contig6763:4096..52661622816749.2287924-UTR-L-elsbetiae_contig6763:4096..5266Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6763 4097..5266 +
1691683784.3905807-UTR-L-elsbetiae_contig6763:4096..52661691683784.3905807-UTR-L-elsbetiae_contig6763:4096..5266Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6763 4097..5266 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816749.2174282-CDS-L-elsbetiae_contig6763:2758..40961622816749.2174282-CDS-L-elsbetiae_contig6763:2758..4096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6763 2759..4096 +
1691683784.379411-CDS-L-elsbetiae_contig6763:2758..40961691683784.379411-CDS-L-elsbetiae_contig6763:2758..4096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6763 2759..4096 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6763.15519.1

>prot_L-elsbetiae_contig6763.15519.1 ID=prot_L-elsbetiae_contig6763.15519.1|Name=mRNA_L-elsbetiae_contig6763.15519.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=446bp
MAGNFSKLHQAVSAGSTERTLALLESGQCDIDGLGHGKTPLMWSATDGYS
RVTRILLNKGADVSAVGDGDFTALHQSALAGHLAVTKMLVKAGADLEAKS
LEGVTPLFMAADCGRSEVVGALIKAGADIDSRKWDGGTPLFVAAQNGHMD
AVMMLLRAGANPRLAFVQGPYEILPLDMAAQSGRVGATRELIRQVGIEGC
GGETGGKQALCAAARGGHVNILAILTDAGVVDAGGALRHAAGYGHEAAVK
FLLQQKGRSTKRYESSYVNNSTSDCGQTAMVCAIGFVEMSISPYPRIVRL
LVDAGADTASTLRVTDAEGTVLLDETLLAGTTRLIREKKVGTKDATGEHL
NKLEEIRRLLQQVGAVHAVSFLWPSNASSSVRTAEGTGTAKTIASPPVMK
LPLLRRSAGARRKLLTTLFKWVVMHVTLLGRRYLIDVAPSLQLCK*
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mRNA from alignment at L-elsbetiae_contig6763:2412..5266+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6763.15519.1 ID=mRNA_L-elsbetiae_contig6763.15519.1|Name=mRNA_L-elsbetiae_contig6763.15519.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2855bp|location=Sequence derived from alignment at L-elsbetiae_contig6763:2412..5266+ (Laminarionema elsbetiae ELsaHSoW15)
GGGGGGCAAAAGGGAGGGACCAAGGGGGCAAAGGGAGCACTATCGCAGGC ACTGTTGTCCAAAGGAAGTGGATTCGCAGAGGCTGAGGATCGAAAAAAAT ATAGTCTGCAGCTTCTGGAGCGTTGGAGACCCAGATCCTACCGCTTTTTC CATCTTCAACCGCCCGACGGCGCCGACGCCGAGAGAGCGACGTTACACTC TTTCACTGCTGGAGTCTTGGTTACCTTCTCTTGGGCCGTTGGGAACCCTG ACTGCAACTCACTTTTCGGATACCTTCTTCGCCCTCAATCCGCGGAGAGA AAGAAATCACACTCGTTCACAACTCCACCGGGCCGCTATTGGAGCAGATG GCCGGCAATTTTAGTAAGCTCCATCAGGCGGTATCCGCTGGTTCCACGGA GAGGACTCTGGCTCTTCTCGAGAGCGGGCAGTGCGACATTGATGGACTCG GCCATGGCAAGACACCCCTCATGTGGTCCGCGACGGACGGTTACTCGCGG GTTACCAGAATCCTGTTGAATAAGGGAGCCGACGTATCAGCGGTGGGCGA CGGCGATTTCACTGCTCTGCACCAGTCCGCTCTTGCTGGGCACCTGGCGG TAACCAAGATGCTGGTGAAGGCCGGCGCAGACCTGGAAGCAAAGTCTCTT GAAGGCGTGACGCCGCTTTTCATGGCTGCGGACTGCGGGCGCAGTGAGGT GGTGGGTGCGTTGATCAAGGCAGGCGCTGATATCGACAGCCGCAAGTGGG ATGGAGGGACACCACTGTTCGTTGCGGCTCAGAATGGGCACATGGACGCG GTCATGATGCTCCTCCGCGCGGGAGCGAACCCGCGGTTGGCCTTTGTCCA GGGGCCATACGAGATCCTCCCATTGGATATGGCGGCGCAAAGCGGCCGAG TGGGGGCGACACGCGAGCTGATTCGGCAGGTTGGGATCGAAGGTTGTGGC GGCGAAACCGGCGGCAAACAGGCTCTGTGTGCGGCCGCCAGGGGAGGGCA TGTGAACATCTTGGCCATTTTGACGGACGCCGGCGTGGTGGATGCGGGCG GAGCCTTGCGACACGCTGCAGGATACGGCCACGAGGCAGCCGTGAAGTTC CTTTTGCAGCAGAAGGGGCGGTCGACCAAACGCTATGAAAGCTCTTACGT GAACAATTCTACCAGCGACTGCGGCCAGACGGCGATGGTTTGCGCGATCG GCTTTGTCGAAATGAGCATCTCTCCGTACCCGAGGATCGTGCGGCTGCTC GTTGACGCCGGAGCGGACACTGCGTCGACCCTCCGAGTCACGGACGCCGA GGGGACGGTGTTGTTGGACGAGACGCTCCTGGCTGGTACAACCCGTTTGA TCCGCGAGAAGAAAGTCGGGACTAAAGACGCCACAGGAGAACATCTCAAC AAGCTGGAGGAAATCCGCCGCTTACTGCAGCAGGTGGGGGCAGTTCATGC GGTCTCCTTTCTGTGGCCGAGCAACGCCTCCTCCAGTGTCCGTACTGCAG AGGGTACAGGCACGGCCAAGACGATTGCGTCACCTCCGGTGATGAAGCTG CCGCTCTTGAGACGAAGCGCTGGAGCCCGTCGCAAACTCTTGACGACCCT GTTCAAGTGGGTAGTGATGCATGTGACGTTGCTGGGTAGGCGATACTTGA TTGATGTAGCTCCTTCATTACAGCTATGCAAATAAACGTTCCGCACACTA CTATCCGGTCGATTTGGTGGGTTTTGCGCCGACTTCTACCCCATGCTGCT GCTGTAATCGTCCCCGCTGCCGGTGCTGTCGCAACTCCGGTCGAATTTTG CATACTGCGGGCTGAACGCCCATCGCCGCCTTGTCTTGCCGTGCCATAGG TCCCTGCTACGCTTTGCGTTTTAACGCGGCTTTTCGAGTTAGGTTGCGCT GTTTTGGAGGGGGGAAATGGTGCTTCTGGGCCGCTTTGCTCCCTTCCGGT GAATGCTTCTCTCAGCGACAATCCGCGTTTGCGCGGCAGCTAGTCCTTCA GCTTGCCGACATCCACTCACCAAACAGCCGGCGTTTTATTTTCGTTCCAT TCTTCGCTCGCCGTCTTACCTCACCCGCGATGGATATACAGGCATTCGCA GAAGTTGCGGTAAGGATCTGGACTCGCTTGGTGAAGCAGGCACGGAGAGC GGCGTTTGGCTGGCCTGGCGTAATGCCGTCGGAAGAGGCGTCGTACGTGT GTGCGGCAGTGTACGGGGCGGCGCCGCTGGGTTGTATTTATATGAGGAGG TGGTTTTTGGTGAAATGATCTACTGCGGACGATATTTTTTCGTGTGCGCT TGTTTCGAAGGCTCAAAAGGTAAACTGACATGCACACTTGAACACGACCC CAGTGAGTCGAGGAATGCGTGGTCTATGGTAAGGATCCCGTGATGCTATT GTTGCAGGAGGAAGTTGCTTGTAACATTTTATGCCTCTGTAGCAGTAGCA TGTTGCGATTGACGGGCGAGGCGGTGTTGCCTGAAAAGGGGTGTTCAATC GCACATCATTCGGAGCGATTTGGTGGGTACGCTCTCAGCAGGACTCTGGA GCTACGCTCGCGAGTTTTGCGCCCCTTCAGATGGACTCGTCCAGATAAAT CGTATACGACGGAAGGAATCGAGAAGCATCAAGGAGAGCTTTTCTTCTCT CGAGGTGGACATAATGAGTAAAGTTCGATCGGTCATGTTACTTTAACACA GAATCTTATCGGAGGGGCAACGCTGTTGGTGATCTGCGGCTCTCAAGTCG GCCACCAACATGTTGGAGCGACTGGCATTGCTGGGGCGTCCTGCAGTACA AGTTGAGATTGTACGACGGCCGGCACCCTTCATGAAAGGCCGTAGACTGC AGTGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6763:2412..5266+

>mRNA_L-elsbetiae_contig6763.15519.1 ID=mRNA_L-elsbetiae_contig6763.15519.1|Name=mRNA_L-elsbetiae_contig6763.15519.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2676bp|location=Sequence derived from alignment at L-elsbetiae_contig6763:2412..5266+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCGGCAATTTTAGTAAGCTCCATCAGGCGGTATCCGCTGGTTCCAC
GGAGAGGACTCTGGCTCTTCTCGAGAGCGGGCAGTGCGACATTGATGGAC
TCGGCCATGGCAAGACACCCCTCATGTGGTCCGCGACGGACGGTTACTCG
CGGGTTACCAGAATCCTGTTGAATAAGGGAGCCGACGTATCAGCGGTGGG
CGACGGCGATTTCACTGCTCTGCACCAGTCCGCTCTTGCTGGGCACCTGG
CGGTAACCAAGATGCTGGTGAAGGCCGGCGCAGACCTGGAAGCAAAGTCT
CTTGAAGGCGTGACGCCGCTTTTCATGGCTGCGGACTGCGGGCGCAGTGA
GGTGGTGGGTGCGTTGATCAAGGCAGGCGCTGATATCGACAGCCGCAAGT
GGGATGGAGGGACACCACTGTTCGTTGCGGCTCAGAATGGGCACATGGAC
GCGGTCATGATGCTCCTCCGCGCGGGAGCGAACCCGCGGTTGGCCTTTGT
CCAGGGGCCATACGAGATCCTCCCATTGGATATGGCGGCGCAAAGCGGCC
GAGTGGGGGCGACACGCGAGCTGATTCGGCAGGTTGGGATCGAAGGTTGT
GGCGGCGAAACCGGCGGCAAACAGGCTCTGTGTGCGGCCGCCAGGGGAGG
GCATGTGAACATCTTGGCCATTTTGACGGACGCCGGCGTGGTGGATGCGG
GCGGAGCCTTGCGACACGCTGCAGGATACGGCCACGAGGCAGCCGTGAAG
TTCCTTTTGCAGCAGAAGGGGCGGTCGACCAAACGCTATGAAAGCTCTTA
CGTGAACAATTCTACCAGCGACTGCGGCCAGACGGCGATGGTTTGCGCGA
TCGGCTTTGTCGAAATGAGCATCTCTCCGTACCCGAGGATCGTGCGGCTG
CTCGTTGACGCCGGAGCGGACACTGCGTCGACCCTCCGAGTCACGGACGC
CGAGGGGACGGTGTTGTTGGACGAGACGCTCCTGGCTGGTACAACCCGTT
TGATCCGCGAGAAGAAAGTCGGGACTAAAGACGCCACAGGAGAACATCTC
AACAAGCTGGAGGAAATCCGCCGCTTACTGCAGCAGGTGGGGGCAGTTCA
TGCGGTCTCCTTTCTGTGGCCGAGCAACGCCTCCTCCAGTGTCCGTACTG
CAGAGGGTACAGGCACGGCCAAGACGATTGCGTCACCTCCGGTGATGAAG
CTGCCGCTCTTGAGACGAAGCGCTGGAGCCCGTCGCAAACTCTTGACGAC
CCTGTTCAAGTGGGTAGTGATGCATGTGACGTTGCTGGGTAGGCGATACT
TGATTGATGTAGCTCCTTCATTACAGCTATGCAAATAAATGGCCGGCAAT
TTTAGTAAGCTCCATCAGGCGGTATCCGCTGGTTCCACGGAGAGGACTCT
GGCTCTTCTCGAGAGCGGGCAGTGCGACATTGATGGACTCGGCCATGGCA
AGACACCCCTCATGTGGTCCGCGACGGACGGTTACTCGCGGGTTACCAGA
ATCCTGTTGAATAAGGGAGCCGACGTATCAGCGGTGGGCGACGGCGATTT
CACTGCTCTGCACCAGTCCGCTCTTGCTGGGCACCTGGCGGTAACCAAGA
TGCTGGTGAAGGCCGGCGCAGACCTGGAAGCAAAGTCTCTTGAAGGCGTG
ACGCCGCTTTTCATGGCTGCGGACTGCGGGCGCAGTGAGGTGGTGGGTGC
GTTGATCAAGGCAGGCGCTGATATCGACAGCCGCAAGTGGGATGGAGGGA
CACCACTGTTCGTTGCGGCTCAGAATGGGCACATGGACGCGGTCATGATG
CTCCTCCGCGCGGGAGCGAACCCGCGGTTGGCCTTTGTCCAGGGGCCATA
CGAGATCCTCCCATTGGATATGGCGGCGCAAAGCGGCCGAGTGGGGGCGA
CACGCGAGCTGATTCGGCAGGTTGGGATCGAAGGTTGTGGCGGCGAAACC
GGCGGCAAACAGGCTCTGTGTGCGGCCGCCAGGGGAGGGCATGTGAACAT
CTTGGCCATTTTGACGGACGCCGGCGTGGTGGATGCGGGCGGAGCCTTGC
GACACGCTGCAGGATACGGCCACGAGGCAGCCGTGAAGTTCCTTTTGCAG
CAGAAGGGGCGGTCGACCAAACGCTATGAAAGCTCTTACGTGAACAATTC
TACCAGCGACTGCGGCCAGACGGCGATGGTTTGCGCGATCGGCTTTGTCG
AAATGAGCATCTCTCCGTACCCGAGGATCGTGCGGCTGCTCGTTGACGCC
GGAGCGGACACTGCGTCGACCCTCCGAGTCACGGACGCCGAGGGGACGGT
GTTGTTGGACGAGACGCTCCTGGCTGGTACAACCCGTTTGATCCGCGAGA
AGAAAGTCGGGACTAAAGACGCCACAGGAGAACATCTCAACAAGCTGGAG
GAAATCCGCCGCTTACTGCAGCAGGTGGGGGCAGTTCATGCGGTCTCCTT
TCTGTGGCCGAGCAACGCCTCCTCCAGTGTCCGTACTGCAGAGGGTACAG
GCACGGCCAAGACGATTGCGTCACCTCCGGTGATGAAGCTGCCGCTCTTG
AGACGAAGCGCTGGAGCCCGTCGCAAACTCTTGACGACCCTGTTCAAGTG
GGTAGTGATGCATGTGACGTTGCTGGGTAGGCGATACTTGATTGATGTAG
CTCCTTCATTACAGCTATGCAAATAA
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