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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 969 |
| Cds size | 570 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816748.5989125-UTR-L-elsbetiae_contig676:3377..3590 | 1622816748.5989125-UTR-L-elsbetiae_contig676:3377..3590 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig676 3378..3590 - |
| 1691683783.9249427-UTR-L-elsbetiae_contig676:3377..3590 | 1691683783.9249427-UTR-L-elsbetiae_contig676:3377..3590 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig676 3378..3590 - |
| 1622816748.6371574-UTR-L-elsbetiae_contig676:5596..5782 | 1622816748.6371574-UTR-L-elsbetiae_contig676:5596..5782 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig676 5597..5782 - |
| 1691683783.9521265-UTR-L-elsbetiae_contig676:5596..5782 | 1691683783.9521265-UTR-L-elsbetiae_contig676:5596..5782 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig676 5597..5782 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816748.611146-CDS-L-elsbetiae_contig676:3590..4096 | 1622816748.611146-CDS-L-elsbetiae_contig676:3590..4096 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig676 3591..4096 - |
| 1691683783.9340372-CDS-L-elsbetiae_contig676:3590..4096 | 1691683783.9340372-CDS-L-elsbetiae_contig676:3590..4096 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig676 3591..4096 - |
| 1622816748.6241326-CDS-L-elsbetiae_contig676:5532..5596 | 1622816748.6241326-CDS-L-elsbetiae_contig676:5532..5596 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig676 5533..5596 - |
| 1691683783.9424217-CDS-L-elsbetiae_contig676:5532..5596 | 1691683783.9424217-CDS-L-elsbetiae_contig676:5532..5596 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig676 5533..5596 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig676.15511.1 >prot_L-elsbetiae_contig676.15511.1 ID=prot_L-elsbetiae_contig676.15511.1|Name=mRNA_L-elsbetiae_contig676.15511.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=190bp
MTVVPEPRTCGVCDFPPQRVCGAKTAAQPTDDAPGPARLCSPKKRSRQQC
RRRQQHTLPAASSPWRRPDNSGGGGSGGGGGAEEKMCNKENIDPKTGRHA
QHPFSPSSPFSPPLLAGGGATKATAPALPAAGGASGRTSIIQKRLFCGSC
CGGEGGGQVRLRPAAVAASRKPAKEPLKDLWNGRSSRCM* back to topmRNA from alignment at L-elsbetiae_contig676:3378..5782- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig676.15511.1 ID=mRNA_L-elsbetiae_contig676.15511.1|Name=mRNA_L-elsbetiae_contig676.15511.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2405bp|location=Sequence derived from alignment at L-elsbetiae_contig676:3378..5782- (Laminarionema elsbetiae ELsaHSoW15)
GCACACGATCAGCCTTATACAACTGAGGAGACCACCTAGCGACGCTGTGC
TCGCTTTGTCTCTTCCAGTGCACCCCTTCTTGTGCACAATAGGTTGTACG
AGGTCGGCGTTTAGGTTTCACACGTACGAGGTTTGAACTTTGCGAGTTCG
CGCCAACCCGCGTGCTTGCTGTTCAGCTCGGCCATCATGACCGTGGTTCC
GGAGCCGAGGACGTGCGGGGTTTGCGACTTCCCGCCCCAGCGAGTGTGCG
GTGAGAAAATTCACGGCGGTTGCGATGTAATACTGCGCTTGTGGTGGAAA
ATCGTCCGTGTCTCTCTAACGTATCTACATACACTATTTTTGTATGTACA
GACAGACACGGTTCGCTTTTTTAAAATCAGTGCTTGTTTTGCTGGCGTTG
ATGTGTGTTCTCAAGCGAAGTAGCCACGCTGACCGTTGTAGCACCCACCA
CCAAGAGAAACTTGAAACTCATCTCCACGAACCCATACAAAGCGGGCGCT
GCTCGCCTGATTTCGAAACCTGCGCGCGGTCAGCACTTGAGAGACAGAAC
CCAAGAGACGTGCTAGCTTTTGAGGAGTTGGAGGAATCCGCGCCGGGGCG
GGCGTGTCGCCGATGCTTCTTTCGTTCTCAGTTCTCCACGAGACGATGCA
CAGCAACACAGTAGTGGCATGCATGTCCCTGTCTGCCTCCAGAAGCACGT
GGAAACATTGGTTGTGGTATACACATATACGTAGGAGGAAGGAATGGATT
CAAATAGAAAACATCCTACTAGATCTTCGTATGTACGTCTTCTACTGGCA
TCTTCACGATTTGAAATGATCGTGGTTGGGGACAATTTGGGGCAGGATCT
ACCAAATGAAGCGTATGCGTACATGCATGTATTTATGTTGTATGTATGTA
TGTATGTATGTATGCGCTTCCGCTGGGTTATTATAGGGTTCGGTGTAGGC
CTCTCCTCGGTAAGCGATCGCCGAAAAGCACCGAATTCGAAAATTCAATT
TGTCGCCGAAAAAACAAAATCTTCCGTGATCATTTTTTGACCACCGAAAG
TCGCCGAAAAACGACTTTCTACAAGCAGTATTGTAGCGGTTCACCTACTC
CGCCGATTTTACTTTGACGAATCGCCAAACAATCAGAAGATCAATCGCCT
GCCAAAGTAGGTACAACTTCGTAGGACCGTATTCAACTTGCTACGTACGG
CACCTAGCGTGGAGGTGATCGCGCCGCGCCGCCCAAACCGCCCTCTAGTT
TGTGGCTTTTTGGCGTGAATTTCTGCACATGTCGTGTGAAGTTTACTCTT
GTGTTTTTGTTCATCTAGCAAAGGCGTGCAGCGATGGCAATGGTACATAC
ACAGCGGCCTCGGAAATTGTCTAAAAGCGACCGTTTGTTGTGCGTGCCGT
TTTTGGAAAAACATCCGGCCCCGTGTTCTTCAGGCCTCACATGCTTCTCG
CCGCCGTGAGCACGGGAGAATTCACCTGAACAACCACACAACACCGTCCG
CTGCGCCCCCGCTGCGCCCCCGCCGCTGCCCACCGCTTTGCGCGCGTGCC
ACTTCAAAAGTCAATCGTACCGGCTCCCACCAATCCTGATACCGCTCTGG
TCTTGGCTGCCCCCCGCTCCGCTCCACCGCCGCTGTTGCCGTTGCCGCTG
TCCCGTTCTGCTGGGATGAAACAAACCGTACCTCAGGAGCCAAGACAGCC
GCCCAACCGACCGACGACGCCCCCGGCCCCGCCCGCCTCTGCTCGCCAAA
GAAACGCAGCAGACAGCAATGCCGGCGTCGGCAACAACACACGCTCCCGG
CGGCGTCGAGCCCGTGGCGGCGGCCGGACAACAGTGGGGGCGGCGGTAGC
GGCGGCGGCGGTGGTGCCGAGGAGAAGATGTGCAACAAGGAGAATATCGA
TCCGAAAACCGGGCGGCACGCGCAGCACCCCTTCTCCCCATCCTCGCCGT
TTTCTCCACCGCTACTAGCGGGCGGCGGGGCGACCAAGGCGACCGCCCCT
GCCTTGCCCGCCGCCGGCGGCGCAAGCGGGAGGACTAGCATCATCCAGAA
GCGTTTGTTCTGCGGAAGCTGCTGCGGGGGGGAGGGGGGAGGACAGGTTC
GTTTGAGGCCGGCGGCCGTGGCGGCTTCTCGCAAGCCGGCCAAGGAGCCG
CTCAAGGACCTCTGGAACGGCCGCAGCAGCCGCTGCATGTAGCGGCGGTC
GTCTGATGCCGGCGCAAGACGACGACAGCAGGGACAGTGCCTCTCGCCCC
GGCAGCTCTCTCTTTCTCTCTCTCTCTCAGCGCTCCGCCTTCGCGCGCGT
AACGCAGCGGTCGGGAGCATACTTACCTAACGATGGGATGACGGAAAAGA
AGGACGTTAAGGGATCGGAGGTAGACGGCCGGGAAGGCGGGCCGGCGGAA
GGGAC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig676:3378..5782- >mRNA_L-elsbetiae_contig676.15511.1 ID=mRNA_L-elsbetiae_contig676.15511.1|Name=mRNA_L-elsbetiae_contig676.15511.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1140bp|location=Sequence derived from alignment at L-elsbetiae_contig676:3378..5782- (Laminarionema elsbetiae ELsaHSoW15)
ATGACCGTGGTTCCGGAGCCGAGGACGTGCGGGGTTTGCGACTTCCCGCC
CCAGCGAGTGTGCGATGACCGTGGTTCCGGAGCCGAGGACGTGCGGGGTT
TGCGACTTCCCGCCCCAGCGAGTGTGCGGAGCCAAGACAGCCGCCCAACC
GACCGACGACGCCCCCGGCCCCGCCCGCCTCTGCTCGCCAAAGAAACGCA
GCAGACAGCAATGCCGGCGTCGGCAACAACACACGCTCCCGGCGGCGTCG
AGCCCGTGGCGGCGGCCGGACAACAGTGGGGGCGGCGGTAGCGGCGGCGG
CGGTGGTGCCGAGGAGAAGATGTGCAACAAGGAGAATATCGATCCGAAAA
CCGGGCGGCACGCGCAGCACCCCTTCTCCCCATCCTCGCCGTTTTCTCCA
CCGCTACTAGCGGGCGGCGGGGCGACCAAGGCGACCGCCCCTGCCTTGCC
CGCCGCCGGCGGCGCAAGCGGGAGGACTAGCATCATCCAGAAGCGTTTGT
TCTGCGGAAGCTGCTGCGGGGGGGAGGGGGGAGGACAGGTTCGTTTGAGG
CCGGCGGCCGTGGCGGCTTCTCGCAAGCCGGCCAAGGAGCCGCTCAAGGA
CCTCTGGAACGGCCGCAGCAGCCGCTGCATGTAGGAGCCAAGACAGCCGC
CCAACCGACCGACGACGCCCCCGGCCCCGCCCGCCTCTGCTCGCCAAAGA
AACGCAGCAGACAGCAATGCCGGCGTCGGCAACAACACACGCTCCCGGCG
GCGTCGAGCCCGTGGCGGCGGCCGGACAACAGTGGGGGCGGCGGTAGCGG
CGGCGGCGGTGGTGCCGAGGAGAAGATGTGCAACAAGGAGAATATCGATC
CGAAAACCGGGCGGCACGCGCAGCACCCCTTCTCCCCATCCTCGCCGTTT
TCTCCACCGCTACTAGCGGGCGGCGGGGCGACCAAGGCGACCGCCCCTGC
CTTGCCCGCCGCCGGCGGCGCAAGCGGGAGGACTAGCATCATCCAGAAGC
GTTTGTTCTGCGGAAGCTGCTGCGGGGGGGAGGGGGGAGGACAGGTTCGT
TTGAGGCCGGCGGCCGTGGCGGCTTCTCGCAAGCCGGCCAAGGAGCCGCT
CAAGGACCTCTGGAACGGCCGCAGCAGCCGCTGCATGTAG back to top
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