mRNA_L-elsbetiae_contig6742.15490.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Match: D8LFV5_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV5_ECTSI) HSP 1 Score: 131 bits (330), Expect = 2.840e-37 Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 1 Query: 4 GYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFGVSTTFFWAFFFRFLLGLLNGLIPLWPTLVSEVCGKEHEVLGMSLIT 291 GY+AG+L S+ M GR++SAY WG+VADR G RPV+ +SL T LAV FG STTF WA RFLLGLLNG+ ++PTLVSE+CGKEHEV+G+ +T Sbjct: 4 GYFAGLLSSSFMFGRVISAYFWGIVADRCGRRPVVLLSLASTGGLAVAFGFSTTFLWALACRFLLGLLNGMTVIFPTLVSEICGKEHEVVGLGAVT 99
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 139 bits (349), Expect = 8.400e-36 Identity = 65/125 (52.00%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 1 AGYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFGVSTTFFWAFFFRFLLGLLNGLIPLWPTLVSEVCGKEHEVLGMSLITMVWSLGALLGSGIGGVLAQPAAHYPFTF 375 AGYYAG + SA M GR+ S+Y WG AD +G PVI+ L VL++ FG+ST+F WA RFLLG+LNGL+ + + SEVCGKEHE GM+ + S+G ++G G+GG+LA+PA HYP F Sbjct: 68 AGYYAGYVSSAFMVGRVGSSYFWGRFADSHGRLPVIYAGLTSMVVLSIAFGLSTSFLWALGCRFLLGVLNGLLGISKAMTSEVCGKEHEATGMAYVLGCASIGLVIGPGLGGLLAEPATHYPTVF 192
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Match: A0A6H5L4Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q8_9PHAE) HSP 1 Score: 137 bits (345), Expect = 9.490e-36 Identity = 64/125 (51.20%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 1 AGYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFGVSTTFFWAFFFRFLLGLLNGLIPLWPTLVSEVCGKEHEVLGMSLITMVWSLGALLGSGIGGVLAQPAAHYPFTF 375 AGYYAG L SA M GR ADRYG PV++I L VL++ FG+ST F+WA RFLLG +NGLI + ++SE+CGK+HE +GM +T WS G ++G GG+LAQPA HYP F Sbjct: 79 AGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHEKVGMGYVTGCWSFGLVIGPAFGGLLAQPATHYPNVF 203
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 138 bits (348), Expect = 1.280e-35 Identity = 65/125 (52.00%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 1 AGYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFGVSTTFFWAFFFRFLLGLLNGLIPLWPTLVSEVCGKEHEVLGMSLITMVWSLGALLGSGIGGVLAQPAAHYPFTF 375 AGYYAG L SA M GR ADRYG PV++I L VL++ FG+ST F+WA RFLLG +NGLI + ++SE+CGK+HE +GM IT WS G ++G GG+LAQPA HYP F Sbjct: 47 AGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHETVGMGYITGCWSFGLVIGPAFGGLLAQPATHYPNVF 171
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Match: A0A6H5JZQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ3_9PHAE) HSP 1 Score: 130 bits (327), Expect = 2.050e-33 Identity = 58/96 (60.42%), Postives = 75/96 (78.12%), Query Frame = 1 Query: 4 GYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFGVSTTFFWAFFFRFLLGLLNGLIPLWPTLVSEVCGKEHEVLGMSLIT 291 GY+AG+L S+ M GR++SAY WG++ADR G RPV+ +SL T LAV FG STTF WA RFLLGLLNG+ ++P+LVSE+CGKEHEV+G+ +T Sbjct: 4 GYFAGLLSSSFMVGRVISAYFWGIIADRCGRRPVVLLSLASTGGLAVAFGFSTTFLWALACRFLLGLLNGMTVIFPSLVSEICGKEHEVVGLGAVT 99
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 130 bits (328), Expect = 7.060e-33 Identity = 61/125 (48.80%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 1 AGYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFGVSTTFFWAFFFRFLLGLLNGLIPLWPTLVSEVCGKEHEVLGMSLITMVWSLGALLGSGIGGVLAQPAAHYPFTF 375 AGYYAG L SA M GR ++ ADRYG PV++I L VL++ FG+ST F+WA RFLLG +N L+ + ++SE+CGK+HE +GM +T S G ++G GG+LAQPA HYP F Sbjct: 115 AGYYAGCLASAFMVGRFATSXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNALMGISKCMISEICGKQHETVGMGYVTGCSSFGLVIGPAFGGLLAQPATHYPNVF 239
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Match: A0A835H3K5_9MAGN (MFS domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835H3K5_9MAGN) HSP 1 Score: 124 bits (311), Expect = 1.190e-30 Identity = 59/124 (47.58%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 4 GYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFGVSTTFFWAFFFRFLLGLLNGLIPLWPTLVSEVCGKEHEVLGMSLITMVWSLGALLGSGIGGVLAQPAAHYPFTF 375 GY+AG + +A M GR +++ WGV+ADRYG +PVI IS + FG+ST+F+ A RFLLG +NGL+ SEVC +EHE LG+SL++M W + ++G IGG+LAQPA +P F Sbjct: 216 GYFAGFVGAAYMFGRALTSIMWGVIADRYGRKPVILISAASVVLFNTLFGLSTSFWMAIVTRFLLGSMNGLLGTIVAYASEVCREEHEGLGLSLVSMAWGIAIIIGPAIGGLLAQPAEKFPDLF 339
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Match: A0A835H706_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835H706_9MAGN) HSP 1 Score: 123 bits (309), Expect = 3.060e-30 Identity = 57/121 (47.11%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 4 GYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFGVSTTFFWAFFFRFLLGLLNGLIPLWPTLVSEVCGKEHEVLGMSLITMVWSLGALLGSGIGGVLAQPAAHYP 366 G+YAG + +A M GR +++ WGV+ADRYG +PVI I + FG+ST+F+ A F RFLLG +NGL+ SEVC EH+ LG+SL++ W +G ++G IGG LAQPA +P Sbjct: 85 GFYAGFVGAAFMFGRALTSIMWGVIADRYGRKPVIMIGTASVVLFNTLFGLSTSFWMAIFTRFLLGTMNGLLGTIKAYASEVCRAEHQALGLSLVSTAWGIGLVVGPAIGGFLAQPAEKFP 205
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Match: A0A6N2KUS6_SALVM (MFS domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KUS6_SALVM) HSP 1 Score: 117 bits (292), Expect = 7.070e-30 Identity = 57/124 (45.97%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 4 GYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFGVSTTFFWAFFFRFLLGLLNGLIPLWPTLVSEVCGKEHEVLGMSLITMVWSLGALLGSGIGGVLAQPAAHYPFTF 375 GYYAG + SA M GR +++ WG++ADRYG +PVI + FG+STTF+ A RFLLG L G++ SEVC KE++ LGMS+I+ W +G ++G +GG LAQPA +P F Sbjct: 78 GYYAGYVGSAFMFGRALTSVLWGMIADRYGRKPVIIFGTVSVVIFNTLFGLSTTFWMAISTRFLLGSLCGILGPMRAYASEVCRKEYQALGMSIISTSWGIGLVIGPALGGFLAQPAEKFPNIF 201
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Match: A0A3S4NAX3_9MAGN (Protein ZINC INDUCED FACILITATOR-LIKE 1-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4NAX3_9MAGN) HSP 1 Score: 120 bits (302), Expect = 9.900e-30 Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = 1 Query: 4 GYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFGVSTTFFWAFFFRFLLGLLNGLIPLWPTLVSEVCGKEHEVLGMSLITMVWSLGALLGSGIGGVLAQPAAHYPFTF 375 G+YAG + S+ M GR +++ WG++ADRYG +PVI I + + FG+ST+F+ A RFLLG+ +GL VSEVC +EH LG+S+++ W +G ++G +GG LAQPA YP F Sbjct: 75 GFYAGYIGSSFMVGRAMASIFWGIIADRYGRKPVIMIGITSVIIFNTLFGLSTSFWMAISTRFLLGIFSGLFGTIMAYVSEVCREEHRALGISIVSTAWGMGLIVGPALGGFLAQPADKYPSLF 198 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6742.15490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6742.15490.1 >prot_L-elsbetiae_contig6742.15490.1 ID=prot_L-elsbetiae_contig6742.15490.1|Name=mRNA_L-elsbetiae_contig6742.15490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp AGYYAGILLSALMTGRIVSAYSWGVVADRYGHRPVIFISLGFTAVLAVGFback to top mRNA from alignment at L-elsbetiae_contig6742:2275..3560+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6742.15490.1 ID=mRNA_L-elsbetiae_contig6742.15490.1|Name=mRNA_L-elsbetiae_contig6742.15490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1286bp|location=Sequence derived from alignment at L-elsbetiae_contig6742:2275..3560+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6742:2275..3560+ >mRNA_L-elsbetiae_contig6742.15490.1 ID=mRNA_L-elsbetiae_contig6742.15490.1|Name=mRNA_L-elsbetiae_contig6742.15490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=750bp|location=Sequence derived from alignment at L-elsbetiae_contig6742:2275..3560+ (Laminarionema elsbetiae ELsaHSoW15)back to top |