mRNA_L-elsbetiae_contig674.15485.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig674.15485.1 vs. uniprot
Match: D7FT79_ECTSI (Mitochondrial import receptor, Tom22 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT79_ECTSI) HSP 1 Score: 203 bits (516), Expect = 1.540e-61 Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1 Query: 241 MPKKLMFNDQERDNGPGILKGLAVTGRSLGVAGFGWAQWAAKKTGRTGWVLLTTAVVTLVPLVFEITREAQLIEQEQIHINALLAEGKTRQEIAQMGLFSALDPNVMGPQAA 576 M KKL FND++RDNGPG+L+ L VTGRSLGVAGFGWAQWAAKKTGRTGWVLLTTAVVTLVPLVFEITREAQLIEQE+IHINALLAEGKTRQEIAQMGL+SALDPNVMGP+A+ Sbjct: 1 MAKKLTFNDEKRDNGPGVLQTLVVTGRSLGVAGFGWAQWAAKKTGRTGWVLLTTAVVTLVPLVFEITREAQLIEQEKIHINALLAEGKTRQEIAQMGLYSALDPNVMGPEAS 112
BLAST of mRNA_L-elsbetiae_contig674.15485.1 vs. uniprot
Match: A0A7S3HMU8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMU8_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.480e-10 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 331 VAGFGWAQWA-AKKTGR-TGWVLLTTAVVTLVPLVFEITREAQLIEQEQIHINALLAEGKTRQEIAQMGLFSALDPNVM 561 A FGW W GR GW ++TT ++T VPL+FE+ RE+ L + EQI I LAEG+T QE+A GL +A++P V+ Sbjct: 30 AAEFGWNSWLWIYANGRMVGWFIVTTGMITAVPLLFEVKRESILEDLEQIQIGKQLAEGRTPQELAFEGLTAAVEPKVL 108
BLAST of mRNA_L-elsbetiae_contig674.15485.1 vs. uniprot
Match: A0A7S0BZI4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZI4_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 5.450e-10 Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 265 DQERDNGPGILKGLAVTGRSLGVAGF---GWAQWAAKKTGRTGWVLLTTAVVTLVPLVFEITREAQLIEQEQIHINALLAEGKTRQEIAQMGL--FSALDPNV 558 D E G GI L +S G W WAAKK+ R G+V+ TT++V L+PL+FE+ RE Q +E E+ H L ++G + +++ ++G F+ P+V Sbjct: 5 DYETTGGGGIKGFLGRANKSFYSGGLFIRDWGLWAAKKSARVGFVIATTSIVVLMPLIFELAREGQSLEVERAHSKDLKSQGYSERQLQELGFSEFAIRPPSV 107
BLAST of mRNA_L-elsbetiae_contig674.15485.1 vs. uniprot
Match: A0A6T7HAY7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HAY7_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.260e-8 Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 280 NGPGILKG-LAVTGRSLGVAGF---GWAQWAAKKTGRTGWVLLTTAVVTLVPLVFEITREAQLIEQEQIHINALLAEGKTRQEIAQMG 531 N G +KG L G+S V G W W AKK+GR G++L TT++V L+PL+ EI REAQ +E E+ + L ++G +++ +MG Sbjct: 8 NQAGGIKGFLQRAGKSFQVGGLLAKDWGFWLAKKSGRIGFILATTSMVVLMPLMLEIGREAQGLEVERSQVKDLRSQGYADRQLQEMG 95
BLAST of mRNA_L-elsbetiae_contig674.15485.1 vs. uniprot
Match: A0A7S0SSA7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSA7_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 5.910e-8 Identity = 29/60 (48.33%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 382 GWVLLTTAVVTLVPLVFEITREAQLIEQEQIHINALLAEGKTRQEIAQMGLFSALDPNVM 561 GW ++TT ++TL+PLV E+ RE ++ + EQ+ I + LAEG + QE+A GL SAL P V+ Sbjct: 51 GWFIVTTGMITLLPLVLEVKREGEVEKLEQLQIQSRLAEGISPQELANNGLTSALPPKVL 110
BLAST of mRNA_L-elsbetiae_contig674.15485.1 vs. uniprot
Match: A0A7S2SD82_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SD82_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 3.930e-7 Identity = 32/88 (36.36%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 280 NGPGILKG-LAVTGRSLGVAGFGWAQ---WAAKKTGRTGWVLLTTAVVTLVPLVFEITREAQLIEQEQIHINALLAEGKTRQEIAQMG 531 + PG +KG L+ GRS G + W ++K + G+V+ TT++V L+PL+FEI RE Q+IE E++ + L ++G + +++ +MG Sbjct: 8 SSPGGIKGFLSRAGRSFYAGGIFAKEKSLWLSEKMLKVGFVIATTSLVVLMPLIFEIAREGQMIENERVVVKDLRSQGYSDRQLGEMG 95
BLAST of mRNA_L-elsbetiae_contig674.15485.1 vs. uniprot
Match: A0A7S3LEZ8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEZ8_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 3.930e-7 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 289 GILKGLAVTGRSLGV----AGFGWAQWAAKKTGRTGWVLLTTAVVTLVPLVFEITREAQLIEQEQIHINALLAEGKTRQEIAQMG 531 G +KG LG+ G QW + G+ ++L TT++V L+PL+FEITREAQLIE E++ N L ++G +++ +MG Sbjct: 9 GGIKGFLQKTGQLGIWTYEKGTTVVQWTYRYGGQAAFILATTSMVVLMPLLFEITREAQLIETERLEANDLRSKGYADRQLKEMG 93
BLAST of mRNA_L-elsbetiae_contig674.15485.1 vs. uniprot
Match: A0A835YN34_9STRA (Six-hairpin glycosidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN34_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 3.990e-7 Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = 1 Query: 247 KKLMFNDQERDNGPGILKGLAVTGRSLGVAGFGWA----QWAAKKTGRTGWVLLTTAVVTLVPLVFEITREAQLIEQEQIHINALLAEGKTRQEIAQMGLFSALDPNVMGPQA 573 +K + +D + D G L+ + +G + W+AK GRT W++ TT ++ + PL+ EI RE Q+IE E++ + LLA+G Q I +MGL DP V+ A Sbjct: 4 RKRLDSDSDTDEAKGGLRRFVDSTIGVGTKTLDYGLKIFHWSAKYGGRTLWIVGTTTLMVVFPLMLEIEREQQIIEIEKLQVKDLLAQGVHPQRIHEMGLSLPRDPAVLSALA 116
BLAST of mRNA_L-elsbetiae_contig674.15485.1 vs. uniprot
Match: A0A7S2PK28_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PK28_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 9.470e-5 Identity = 26/60 (43.33%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 376 RTGWVLLTTAVVTLVPLVFEITREAQLIEQEQIHINALLAEGKTRQEIAQMG-LFSALDP 552 R G+++ TTA+VTL+PL+FEI RE+Q +E E+ L ++G + +++ QMG + SA+ P Sbjct: 41 RVGFIVTTTAIVTLMPLIFEIGRESQTLEAEKSQAKDLRSQGFSDRQLEQMGFMVSAIRP 100 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig674.15485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig674.15485.1 >prot_L-elsbetiae_contig674.15485.1 ID=prot_L-elsbetiae_contig674.15485.1|Name=mRNA_L-elsbetiae_contig674.15485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp MPKKLMFNDQERDNGPGILKGLAVTGRSLGVAGFGWAQWAAKKTGRTGWVback to top mRNA from alignment at L-elsbetiae_contig674:22038..26845- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig674.15485.1 ID=mRNA_L-elsbetiae_contig674.15485.1|Name=mRNA_L-elsbetiae_contig674.15485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4808bp|location=Sequence derived from alignment at L-elsbetiae_contig674:22038..26845- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig674:22038..26845- >mRNA_L-elsbetiae_contig674.15485.1 ID=mRNA_L-elsbetiae_contig674.15485.1|Name=mRNA_L-elsbetiae_contig674.15485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=690bp|location=Sequence derived from alignment at L-elsbetiae_contig674:22038..26845- (Laminarionema elsbetiae ELsaHSoW15)back to top |