mRNA_L-elsbetiae_contig6737.15481.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI) HSP 1 Score: 224 bits (571), Expect = 1.800e-57 Identity = 117/123 (95.12%), Postives = 120/123 (97.56%), Query Frame = 3 Query: 894 FQEGYGTDVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAQQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYSTLWRQQTSKMSGE 1262 FQEGY DVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQA+QKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYSTLW QQTSK++GE Sbjct: 1082 FQEGYDADVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAKQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYSTLWNQQTSKLTGE 1204
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI) HSP 1 Score: 211 bits (538), Expect = 3.230e-53 Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 3 Query: 894 FQEGYGTDVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAQQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYSTLWRQQTSKMSG 1259 FQ GY +VGEKSALLSGGQKQRIAIARAIL NPPILLLDEATSALDNESEKVVQEALDQLQA+QKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYSTLW QQ SK +G Sbjct: 1171 FQGGYEAEVGEKSALLSGGQKQRIAIARAILRNPPILLLDEATSALDNESEKVVQEALDQLQAKQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYSTLWNQQKSKPAG 1292
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Match: A0A7R9WM24_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WM24_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.150e-39 Identity = 80/114 (70.18%), Postives = 95/114 (83.33%), Query Frame = 3 Query: 900 EGYGTDVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAQQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYSTLWRQQ 1241 +GY TD+G LLSGGQ+QRIAI+RAI++NP IL+LDEATSALDNESEK+VQ ALD LQ +Q RTTL VAHRL T++N KIAVL+ GGV+ELG+HDELL LKGLY LW +Q Sbjct: 83 DGYDTDIGVGGMLLSGGQRQRIAISRAIVSNPKILVLDEATSALDNESEKIVQAALDDLQEKQPRTTLVVAHRLGTVKNCTKIAVLDRGGVRELGSHDELLELKGLYHELWMKQ 196
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.140e-39 Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 3 Query: 894 FQEGYGTDVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAQQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKG-LYSTLWRQQT 1244 F +GY TDVGEKSALLSGGQKQRIAIARAIL NP I+LLDEATSALDNESE+ VQ ALD+LQ+ Q+RTTL VAHRLTTIRN+DKIAVL GG V+ELGTH+EL+AL G Y L+RQQT Sbjct: 1243 FTDGYETDVGEKSALLSGGQKQRIAIARAILRNPNIVLLDEATSALDNESERQVQAALDRLQSLQRRTTLVVAHRLTTIRNADKIAVLGGGCVRELGTHNELMALPGSTYGKLYRQQT 1360
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Match: A0A836CNL1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL1_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.590e-39 Identity = 90/122 (73.77%), Postives = 108/122 (88.52%), Query Frame = 3 Query: 885 LSVFQEGYGTDVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAQQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKG-LYSTLWRQQTS 1247 ++ F EGY TDVGEKSALLSGGQKQRIAIARAIL NP ILLLDEATSALDNESE+ VQ ALD+L+A QKRTTL VAHRL+TIRN+DKIAV+ GG V+ELG+HD+L++L G LY++L+ +QT+ Sbjct: 1420 VTAFAEGYDTDVGEKSALLSGGQKQRIAIARAILKNPAILLLDEATSALDNESERQVQAALDRLRALQKRTTLVVAHRLSTIRNADKIAVVTGGCVRELGSHDDLVSLPGGLYASLYNRQTA 1541
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.050e-38 Identity = 91/118 (77.12%), Postives = 100/118 (84.75%), Query Frame = 3 Query: 894 FQEGYGTDVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAQQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKG-LYSTLWRQQT 1244 F +GY TDVGEKSALLSGGQKQRIAIARAIL NP ILLLDEATSALDNESE+ VQ ALD LQ+ Q+RTTL VAHRLTTIRN+DKIAVL G V+ELGTHDEL+A G Y L+R+QT Sbjct: 1099 FTDGYETDVGEKSALLSGGQKQRIAIARAILRNPNILLLDEATSALDNESERQVQAALDHLQSLQRRTTLVVAHRLTTIRNADKIAVLGTGAVRELGTHDELMATPGSTYGKLYRRQT 1216
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.630e-38 Identity = 90/118 (76.27%), Postives = 101/118 (85.59%), Query Frame = 3 Query: 894 FQEGYGTDVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAQQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGL-YSTLWRQQT 1244 F+ GY T+VGEKSALLSGGQKQRIAIARAIL NP ILLLDEATSALDNESE+ VQ ALD LQ+ Q+RTTL VAHRLTT+ N+DKIAVL GG V ELGTHDEL+AL G Y+ L+R+QT Sbjct: 1106 FEHGYDTNVGEKSALLSGGQKQRIAIARAILRNPAILLLDEATSALDNESERQVQMALDHLQSLQRRTTLVVAHRLTTVHNADKIAVLGGGKVCELGTHDELMALPGSNYAKLYRRQT 1223
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Match: A0A7S0FNK3_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNK3_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.460e-36 Identity = 77/119 (64.71%), Postives = 97/119 (81.51%), Query Frame = 3 Query: 906 YGTDVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAQQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYSTLWRQQTSKMSGE 1262 +GTD+G LLSGGQ+QR+AIARAI+++P IL+LDEAT+ALDNESE++VQ ALD LQ +Q RTTL VAHRLTT++N D+I VL+GGGV+ELG+H ELL KGLY+ LW +Q GE Sbjct: 326 FGTDIGSGGMLLSGGQRQRVAIARAIISDPAILVLDEATAALDNESERIVQAALDDLQEKQPRTTLVVAHRLTTVKNCDQICVLDGGGVKELGSHSELLDKKGLYAELWMKQGGGGDGE 444
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Match: A0A6H5JWI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI0_9PHAE) HSP 1 Score: 152 bits (384), Expect = 1.720e-36 Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 3 Query: 975 RAILNNPPILLLDEATSALDNESEKVVQEALDQLQAQQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYS 1223 RAIL NPPILLLDEATSALDNESEKVVQEALDQLQA+QKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYS Sbjct: 308 RAILRNPPILLLDEATSALDNESEKVVQEALDQLQAKQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYS 390
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Match: A0A1X2GYN1_9FUNG (ATP-binding cassette superfamily n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GYN1_9FUNG) HSP 1 Score: 142 bits (357), Expect = 6.110e-36 Identity = 73/124 (58.87%), Postives = 100/124 (80.65%), Query Frame = 3 Query: 885 LSVFQEGYGTDVGEKSALLSGGQKQRIAIARAILNNPPILLLDEATSALDNESEKVVQEALDQLQAQQKRTTLTVAHRLTTIRNSDKIAVLNGGGVQELGTHDELLALKGLYSTLWRQQTSKMS 1256 +S +G+ T VG+K + LSGGQKQRIAIARA++ P +LLLDEATSALD+ESEK+VQEALD++ Q RTT T+AHRL+TI+NSD IAV++ G ++ELG+H +LLAL G+Y+ + QQ+ ++S Sbjct: 1 MSHLPDGFDTRVGDKGSQLSGGQKQRIAIARALVRKPKVLLLDEATSALDSESEKIVQEALDKVLEQGGRTTTTIAHRLSTIQNSDVIAVVSDGQIKELGSHQDLLALNGIYADMVAQQSLQVS 124 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6737.15481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6737.15481.1 >prot_L-elsbetiae_contig6737.15481.1 ID=prot_L-elsbetiae_contig6737.15481.1|Name=mRNA_L-elsbetiae_contig6737.15481.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp MCLSVCLSVFQEGYGTDVGEKSALLSGGQKQRIAIARAILNNPPILLLDEback to top mRNA from alignment at L-elsbetiae_contig6737:5357..9593+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6737.15481.1 ID=mRNA_L-elsbetiae_contig6737.15481.1|Name=mRNA_L-elsbetiae_contig6737.15481.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4237bp|location=Sequence derived from alignment at L-elsbetiae_contig6737:5357..9593+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6737:5357..9593+ >mRNA_L-elsbetiae_contig6737.15481.1 ID=mRNA_L-elsbetiae_contig6737.15481.1|Name=mRNA_L-elsbetiae_contig6737.15481.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig6737:5357..9593+ (Laminarionema elsbetiae ELsaHSoW15)back to top |