mRNA_L-elsbetiae_contig6726.15469.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6726.15469.1
Unique NamemRNA_L-elsbetiae_contig6726.15469.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6726.15469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6726contigL-elsbetiae_contig6726:3000..8400 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size483
Cds size483
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6726.15469.1prot_L-elsbetiae_contig6726.15469.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6726 3000..8400 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816745.162979-CDS-L-elsbetiae_contig6726:2999..31171622816745.162979-CDS-L-elsbetiae_contig6726:2999..3117Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6726 3000..3117 -
1691683781.5205617-CDS-L-elsbetiae_contig6726:2999..31171691683781.5205617-CDS-L-elsbetiae_contig6726:2999..3117Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6726 3000..3117 -
1622816745.177683-CDS-L-elsbetiae_contig6726:4870..51751622816745.177683-CDS-L-elsbetiae_contig6726:4870..5175Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6726 4871..5175 -
1691683781.5300438-CDS-L-elsbetiae_contig6726:4870..51751691683781.5300438-CDS-L-elsbetiae_contig6726:4870..5175Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6726 4871..5175 -
1622816745.1880312-CDS-L-elsbetiae_contig6726:8340..84001622816745.1880312-CDS-L-elsbetiae_contig6726:8340..8400Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6726 8341..8400 -
1691683781.538256-CDS-L-elsbetiae_contig6726:8340..84001691683781.538256-CDS-L-elsbetiae_contig6726:8340..8400Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6726 8341..8400 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6726.15469.1

>prot_L-elsbetiae_contig6726.15469.1 ID=prot_L-elsbetiae_contig6726.15469.1|Name=mRNA_L-elsbetiae_contig6726.15469.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=161bp
GHRETLQSQLDQQVTRCQQKEKELEEQRRSIEAQRSSAEEQRRSIEEQRK
AAEEQRKAAEAESARASALTEALNAERQEREEERTFRGREAERVSREQES
AVLRVSELLEDERVARDEESSRLTALLEEEKSARREESALGEAVLREVRE
TQGLLGEASL*
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mRNA from alignment at L-elsbetiae_contig6726:3000..8400-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6726.15469.1 ID=mRNA_L-elsbetiae_contig6726.15469.1|Name=mRNA_L-elsbetiae_contig6726.15469.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5401bp|location=Sequence derived from alignment at L-elsbetiae_contig6726:3000..8400- (Laminarionema elsbetiae ELsaHSoW15)
GGGCACCGGGAGACCCTTCAGTCGCAGCTTGACCAGCAGGTCACGCGATG
CCAGCAGAAGGTGAGGGCGGTGGTGGTGGTGGTGTTGTTACTGGTAGTGT
TGTTGGTGATGGTGGTTGGTGGTGGTGGTAGGGGTGGTGGTGGTGGTGGT
GGTGTTTCTGGTAGTGTTGGTGGTGGTGGTGGTTGTTGTTGTTGTTGTTG
TTACTGGTAGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGTGTT
GTTACTTGTAGTGGTGGTGGTGGTGTCACTGTTTATTGCTAGGCGTTGTT
GTTGTCGTTGTTGTTGTTGTTACTGGTAGTGGTGGTGGTGATGGCGGTGG
TGATGGTGGTGGTGGTGTTGTTACTTGTAGTGGTGGTGGTGGTGTCACTG
TTTATTGCTAGGCGTTGTCGTTGTTGTCGTTGTTGTTGTTGTTGTTATTG
TTACTGGTAGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGTGTT
GTTACTTGTAGTGGTGGTGGTGATGGTGGTTGGTGGTGGTGGTGATGGTA
GTGGTGGTGGTGGTGGTGGTGGTGTTACTGGTAGTGTTGTTGGTGATGTT
ACTGTTTATTGCTAGGCGTTGTCGTTGTTGTCGTTGTTGTTGTTGTTGTT
GCCGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTTTCGTCGTTGTTGT
TGTTGTGGTTACTGGTAGTGGTGGTGGTGGTGGCGGTGTTGTACTCTTCG
TGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGTTGT
TGCTGCTGCCGTTGCTATCGTAGTTGCTGCCGCATGTTGTGGTCGTCGTT
GTTGCTGGTGGTGGTGGCGGTGGTGGTGGTGCTTTCTCCACACATGTGCC
GCTCTTTGTTGTTGGCAGTCCCGTCGATAGTGCTCAAACGAAAACGCCTT
ATCCCGTATTACTTTCAAACACGGGTCCCCTCTCCCAAAGTTGCATACAT
TTAGAGGCATAAATCGCAGCCAGATATGCAGTCACCCTGTTTTGTTCCAT
TTTTTTGGCCCCCTACATATTGATGTTTTTAGTACTAATTGGCTCGTTTA
CCCAATACCGTAGGTGACACAAGATACCACACCCCCTGGACAGATTTTCA
AAGCTCGATTCCTCCCCAGCCGGAAGAGTAATGCCAGTGCCGAAAGGGGT
GGCGTTGGAAAGACCTATTCGAGGGCTGTCCGAAAGTGTTTCGTTTGGTG
CTGGCGCCCTCTTCGTTACGGAGTAATAGAGCTCCAAAAGTCGGTCCAGG
GGGTGTGGTATCTTGTGTCACCTACGGTAGGCGAGTGTGCTCCAGGAGAA
AGAATGAAAGAGATCTGTAGGGCAGAGATCCGGAAGAGGAGGGGGGCGAC
AGTAAAGCTTGAACATCGATGGCGCCATCCGTGGTAGTGCGGTCCAGTCT
GTGTCACGCTGTGACCCCGGTTGGGTCGTCTAGCTAGGTAGTCGTAGTGG
AGGGAGGGGGCCCCCTGTGGTAGTCGTAGTGGAGGAAGGCCCCCCCCTGT
GGGGCAGACGACGAATAAATAGGCCAGTAATTTAAGAAAGAAAAGCAACG
TTGGAGAAAACAAATACTGTAGTATAGTTGTCGTTGATGAAAGTTTGGGA
TAAGATGAGGCCTCCTGGTTAGGGAGGCTTGACGGCTGTGGGTGCTCCTT
CAAGCCTCTCTACAAGTCATCTTAGTCCTGTCCCGCGGCCCCCCTTCGGG
GCTCCGTGGATCGTGATTATTTTTCTTTCTCGGCGGGTTAACCCTTTTAG
TACGCTAGCCCTCTGAAAAAAACAATTATGTATCGCCGAAAAGTTATCGC
GCCTTCTGGGTGCCCACTGATTGGCCGAGAAACAACAGTCTCTCCATTTT
GCAGCTGCGGAGCCCCGACATCATTCGGAGAAAAATTGTATTCAAAAACG
CAAATCAAACTGTGTCCAAACCGTTTGGAGAAAAAAAATATGCTGCAACG
CAGTACTGAAAGGGTTAAACGAACGCGGAGAGTTGCCCTGTTCTTTTTGC
TTGTGCTTGGGAAGGAAGCGTAACGGCCGGTATCGCTACAAAGCAGATAC
CTCTACCAAGCGCAAAACGCGACGGTTTGCACCATACATACAGGCAGACG
GGGATAGAGCGTACAAGAGAAGACGACAGAGAGAGGGGTAGATAACGCGA
GAGACGGTAGATAGATAGGAGGAGAGAGTTTGCATCGAACGGTTTGCATC
ATGCACGCAGATAAGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAAGGCAGCAGAGAGAGGGGTAGAGAACATGAGAGAAGGTAGATCGAT
AGAAGGAAAGAGCTTGCATCGAACGGTTTGCGTCATGCATACAGGCATAT
ATGGAAGGGAGAGAAAAAGTAAGATAGGATACCGTAGGTGACACAAGATA
CCACACCCCCTGGACCGACTTTTAGAGCTGCATTACTCCATAACCAAGAG
GGCGCCAGCACCAAACGACACATTTTCGGACAGCCCTCGACTAGGTCTGT
CCAACGCCACCACCTTCGGCATTGTCACTTTTCTTGCAAGGGAGAAATCG
AGGTCTAAAATTCGGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTA
GGAGAGCGAGGGAGAGAGAAAGTGAGAGGAGATAGATAGATAGATAGACA
GGAGCAGAACGAAAAAGGCAGACACTCAGACAGTCAGGGCGAGAGAAGGA
CGAAGACGTTTGTATGAGTGATCCTCTGGGGGTTTCACGGTTGTTTCCCT
TATTGTTGTTCCCCTTATTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTC
CTCTCAGGAAAAGGAGCTAGACGACCCAAACGGGGTCACACACATCTGTG
TGACCCCGGCTGGGTCGTCTAGCTAGTCGTAGTGGAGGAAGGGGGCGAGT
GGGGGGCAGACGACAAATATGCCATCAATGGGAGGGGAAAAAAAAAGAAT
ACAAATATATGACCCTCTGGAGAGTTTCACGGTTGTTCCCCTTGTTTCTT
AAAATAAAACAAAGAATCAAAGATGGAACCTAACCCATACTAGAGCAAAG
ACTCGGTATAACGATATATTGGTGAGATTGAGACTCGATTTGCGAAATGA
GACTGAGATGGTTTTTGGCTATTTGAAGGGCAAAGACGTCGGATCATTTG
TTACTGTTGTTGTTGCCCTCCTCAGGAAAAGGAGCTGGAGGAGCAGAGGA
GGTCCATCGAGGCGCAGAGGAGCTCCGCCGAGGAGCAGAGGAGGTCCATC
GAGGAGCAGAGGAAGGCCGCCGAGGAGCAGAGGAAGGCCGCCGAAGCGGA
ATCAGCGAGGGCGTCCGCGCTGACCGAGGCCCTGAACGCAGAGCGGCAGG
AGAGGGAAGAGGAGCGCACCTTTCGAGGCCGAGAAGCGGAGCGGGTTTCC
AGAGAGCAGGAGAGTGCGGTGCTGCGGGTGTCGGAGCTGCTGGAAGACGA
GCGCGTCGCCAGGGACGAGGAATCGAGCAGGTTGGTAGGCTTATTTAGGC
CCATTATGCTGGCATAGCTTTTAGCGTAAAGGAGGCATGTTTGCCTCTTT
TCAGCATAATTAGCCTTTTTCTGGAGCATAAAGGCATATTTGAGGTCGAA
AAAAGAGCATATGCCCCTTAAAAAAAGGATAATGGGCCTAAGCCTACAGG
TTGGTTGGTGCAAGGCCCATCTGTAAATACTTCGAAGTGTACAAACAACA
AACACACAGGGTTTTTCTATGTCCGATTTGATTTTTTTCTCTCGCGCTTT
CATTTCGTCCCTGTCAGCGAACAACGCTCAGCGCCAGTGGACGACGCTCA
GCTGTGTACTATGTACAAACTTGGACGTTTTACCGTCGACGAGGGAACGG
GACGGCTGAACGCTTCTCGCGAGAAAAGTCTGAGGGAAGCACCGCAGAAG
GGGGGAGTGGGGGCCGGCCTCGGGGGGAGGAAATAAACCCTTCTGTGTGA
CTGACCACGGTTCAGTACCCGGGCAAGATGCCCTTGTGGCAAGGAACCTG
TCGAGCACTGGAAATACATGTTGTGCTTTTCGGGAGGGGCCCCATGCGGC
CAGTTTTAGCGTACAGCCCAAAAAATGTGCAACAAAAAATACATCAAGTC
TTGCTCGTCAATGAAGCCCCCGGAGCCAAACTCCAGCTGTGGGCCCCCCT
TCACAATTCCCCTCAACATTCATCCCCTTTTTTTTGTTTGAGCCACAGTT
CCGTGCGCACAATCTGTCGTCCTCAATCCAGGCTCACGGCTTTAACACCA
CTCCCCCCCCTTTGCTTAATCCACAGTTTGTGCATCAACCCCTTTATTCA
TTTCCTCCACAAACTGTGCGCACAACCTGTCGTCCTCAATCCAGACTCGC
GGCCTTTTCAACCGTTCCCTTCTTTTTTGCTTAAGCCACAGTTTGTGCGC
ACAAATCTGCCGGCTTCAATCCAGACGCACGGCCTTACAATCAAAACCCC
CTTTCTCTTATTTTCTTTCCTCCAAACAATCGTGCGCACAATCTGCCGCC
TTCTCCAGGCCCACGGCCTTGTCGCCATCCCCTTCCTTAAGTCTTCCCTC
CACAATCTGTCGTCTACATACAGTCTTAATCTGCCGTCTTCAATCCACAC
TCACAGACTATTCAACCACTCCCTTATTTTCTTTCCTCCACTCTCTTGTC
GTTTTCGATCCAGGCTCGCGGCCGCCTTAACAACCATTTCCTTCTTTTGT
TCCCTCCGCGAATTGTGCGCGCGATCTGTCATCCTCAACCTGTCGTCCTA
GATCGACCCATGCTCGCTTTATCTTCCGAGTAGTATATTACAATATATGT
ACTCTACCTTTGATTGTGTGCTGGCGAGACGCAAGACCCCTCGGGGGTCC
AGTTTAGTATATCGCCGGCCGCGTATGTATGTACCGTAATTGTGATGTTT
TCTTTATTTTCTTCCGCGGCGTCGATGTGCCTTGTTTTGTGACTACGGGC
GGGCCGGCCCCCCTAAGATGTTTTGGACTAGAGAGCTTATGTGAGAAACA
ACAACAAGGATGGGCTAATGTGAGAAACAACAACAACAACAACAACAACA
ACAAGCAGCCTTGCCATCAACCCCTTATTTTCAATCATTTGTTATAAGAT
GTACTCTCAGCCGAGTACTTGGTTAACCTTTGTAACCTTTTACCTTATGG
CTGAGTGGTCTAATTCCCTGACACATTCCCTTATCTTATTATTCCCTCCA
CAATCTGCCGTCTGAAATCTTCGATTGACTCAGGCTCACGGCCTTGTTGG
AGGAAGAGAAGAGCGCCAGGCGGGAAGAAAGCGCCCTGGGCGAGGCCGTT
CTTAGGGAGGTGCGGGAGACACAAGGACTTCTGGGAGAGGCGAGTCTCTG
A
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6726:3000..8400-

>mRNA_L-elsbetiae_contig6726.15469.1 ID=mRNA_L-elsbetiae_contig6726.15469.1|Name=mRNA_L-elsbetiae_contig6726.15469.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=966bp|location=Sequence derived from alignment at L-elsbetiae_contig6726:3000..8400- (Laminarionema elsbetiae ELsaHSoW15)
GGGCACCGGGAGACCCTTCAGTCGCAGCTTGACCAGCAGGTCACGCGATG
CCAGCAGAAGGGGCACCGGGAGACCCTTCAGTCGCAGCTTGACCAGCAGG
TCACGCGATGCCAGCAGAAGGAAAAGGAGCTGGAGGAGCAGAGGAGGTCC
ATCGAGGCGCAGAGGAGCTCCGCCGAGGAGCAGAGGAGGTCCATCGAGGA
GCAGAGGAAGGCCGCCGAGGAGCAGAGGAAGGCCGCCGAAGCGGAATCAG
CGAGGGCGTCCGCGCTGACCGAGGCCCTGAACGCAGAGCGGCAGGAGAGG
GAAGAGGAGCGCACCTTTCGAGGCCGAGAAGCGGAGCGGGTTTCCAGAGA
GCAGGAGAGTGCGGTGCTGCGGGTGTCGGAGCTGCTGGAAGACGAGCGCG
TCGCCAGGGACGAGGAATCGAGCAGGAAAAGGAGCTGGAGGAGCAGAGGA
GGTCCATCGAGGCGCAGAGGAGCTCCGCCGAGGAGCAGAGGAGGTCCATC
GAGGAGCAGAGGAAGGCCGCCGAGGAGCAGAGGAAGGCCGCCGAAGCGGA
ATCAGCGAGGGCGTCCGCGCTGACCGAGGCCCTGAACGCAGAGCGGCAGG
AGAGGGAAGAGGAGCGCACCTTTCGAGGCCGAGAAGCGGAGCGGGTTTCC
AGAGAGCAGGAGAGTGCGGTGCTGCGGGTGTCGGAGCTGCTGGAAGACGA
GCGCGTCGCCAGGGACGAGGAATCGAGCAGGCTCACGGCCTTGTTGGAGG
AAGAGAAGAGCGCCAGGCGGGAAGAAAGCGCCCTGGGCGAGGCCGTTCTT
AGGGAGGTGCGGGAGACACAAGGACTTCTGGGAGAGGCGAGTCTCTGAGC
TCACGGCCTTGTTGGAGGAAGAGAAGAGCGCCAGGCGGGAAGAAAGCGCC
CTGGGCGAGGCCGTTCTTAGGGAGGTGCGGGAGACACAAGGACTTCTGGG
AGAGGCGAGTCTCTGA
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