mRNA_L-elsbetiae_contig6623.15348.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: D7FL76_ECTSI (Tropinone reductase, putative / tropine dehydrogenase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL76_ECTSI) HSP 1 Score: 370 bits (950), Expect = 1.360e-121 Identity = 182/216 (84.26%), Postives = 200/216 (92.59%), Query Frame = 3 Query: 3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWMT 650 EWKSKGL V GTAADV TAEGRE+LV+ EEHF GLLDILVNNVGT+IRKATVDYTPEE +VM+TNFTSLFLLT+LL+P LKAAAA++G+RENGGSSV+NISSVAG+T IKSG+PYA+SKAAMNQVTR WGCEWAPDGIRVNAVAPWYTKTPLTEPVQAD RV EI +RTPM RWADADEVSG+VAFLCM+GAGYITSQVI+TDGGFTANGWMT Sbjct: 92 EWKSKGLLVEGTAADVTTAEGRESLVKLAEEHFGGLLDILVNNVGTNIRKATVDYTPEELAYVMDTNFTSLFLLTKLLHPLLKAAAAVKGSRENGGSSVINISSVAGITPIKSGSPYAASKAAMNQVTRLWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADPVRVNEITQRTPMKRWADADEVSGMVAFLCMKGAGYITSQVIATDGGFTANGWMT 307
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: D7FL79_ECTSI (Tropinone reductase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL79_ECTSI) HSP 1 Score: 284 bits (726), Expect = 1.570e-88 Identity = 143/216 (66.20%), Postives = 171/216 (79.17%), Query Frame = 3 Query: 3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKA-TVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWM 647 EW++KGL VHG A DV TAEGR+ L + EEHFDG LDILVNNVG SIRK+ T D+TPEEF ++NTNF+++ LT+L +P LKAAAA EGAR+ GGSSVVNISS+AG+TA+K+G YA+SKAA+N++T NWGCEWA DGIRVNAVAP T TP TE V R E++ R PMGRWAD E+SG VAFLCM+GA YITSQVI DGG+ +NGWM Sbjct: 59 EWRAKGLEVHGIAVDVTTAEGRQELFSAAEEHFDGALDILVNNVGRSIRKSSTFDFTPEEFETIINTNFSTVLSLTKLFHPLLKAAAAAEGARDKGGSSVVNISSIAGVTAVKTGAAYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESVP----RSTELMDRIPMGRWADPHEISGQVAFLCMKGASYITSQVICVDGGWASNGWM 270
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A835YM08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM08_9STRA) HSP 1 Score: 267 bits (683), Expect = 2.900e-82 Identity = 137/216 (63.43%), Postives = 161/216 (74.54%), Query Frame = 3 Query: 3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWMT 650 EW+++GL VHG+ ADV +AE R AL++ V E F G LDILVNNVGTSIR+ATVDYT EE HV+ NF S F + QL +P LK A GG SVVNI SVAG+T+IKSGTPYA+SKAAM++VT+N CEWA DGIRVN VAPWYT TPL PV D + EI+ RTPM R A+A+EVS +VAFLCMRGA YIT QV+ DGGFT NGW+T Sbjct: 52 EWRAQGLKVHGSVADVSSAEDRAALLQKVGEAFGGSLDILVNNVGTSIRRATVDYTSEEAEHVLRVNFHSCFAMMQLCHPLLKEA--------QGGGSVVNIGSVAGVTSIKSGTPYAASKAAMHKVTQNCACEWAGDGIRVNCVAPWYTNTPLASPVFEDKIKYAEILSRTPMKRIAEAEEVSALVAFLCMRGASYITGQVVCVDGGFTQNGWIT 259
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A6H5JMS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS4_9PHAE) HSP 1 Score: 260 bits (664), Expect = 8.860e-79 Identity = 139/239 (58.16%), Postives = 168/239 (70.29%), Query Frame = 3 Query: 3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKA-TVDYTPEEFTHVMNTNFTSLFLLTQ-----------------------LLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWM 647 EW++KGL V+G A DV TAEGR+ L + EE FDG LDILVNNVG SIRK+ T DYTPEEF +++TNF+++ LT+ L +P LKAAAA EGAR GGSSVVNISS+AG+ A+K+G YA+SKAA+N++T NWGCEWA DGIRVNAVAP T TP TE V R E++ R PMGRWA+ E+SG VAFLCM+GA YITSQVI DGG+ +NGWM Sbjct: 73 EWRAKGLEVYGIAVDVTTAEGRQELYSAAEERFDGALDILVNNVGRSIRKSSTFDYTPEEFETIIDTNFSTVLSLTKARLYVFTLICLGRFASLIPCSVFLFHPLLKAAAAAEGARAKGGSSVVNISSIAGVIAVKTGAAYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESVP----RSTELMDRIPMGRWAEPHEISGQVAFLCMKGASYITSQVICVDGGWASNGWM 307
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A7C3PME0_9CYAN (SDR family oxidoreductase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PME0_9CYAN) HSP 1 Score: 229 bits (583), Expect = 2.060e-67 Identity = 112/213 (52.58%), Postives = 153/213 (71.83%), Query Frame = 3 Query: 6 WKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644 W +GL +G ADV T EGREA+++ ++E F G LDILVNNVGT+IRK ++YTPEE+ + TN TS+F L QL YPFLKA++ +S+VNI SVAGLT++++G PY +KAA+ Q+TRN EWA DGIRVN VAPW+ +TPLTEP+ +++ +E +I RTP+GR + +E++G+V FLC+ A YIT Q I+ DGGF A G+ Sbjct: 60 WNQQGLPAYGVGADVATFEGREAVMQFLQETF-GRLDILVNNVGTNIRKKAIEYTPEEYDFIFQTNLTSVFELCQLTYPFLKASSQ---------ASIVNIGSVAGLTSVRTGAPYGMTKAALTQLTRNLAVEWASDGIRVNTVAPWFIRTPLTEPLLSNSDTIEAVIARTPLGRVGEPEEIAGLVTFLCLPTASYITGQCIAVDGGFLAYGF 262
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A7S3PZB4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZB4_9STRA) HSP 1 Score: 230 bits (586), Expect = 2.280e-67 Identity = 117/221 (52.94%), Postives = 152/221 (68.78%), Query Frame = 3 Query: 3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFD-------GLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644 EW+S+G+ V G ADV T+EGRE+L+ +++ + G LDILVNNVGT+IRK ++DY+ E+ V+ TNF S+F LT+L + FLK + G SS+VNI SVAG+T +KSGTPYA++KAAMNQVT NW CEW P GIRVN VAPWY T L + V + ++ RTP GR + +EV+ +VAFLC+ GAGYIT QVIS DGGFT N + Sbjct: 72 EWRSEGIDVRGCVADVSTSEGRESLIGEMKKMINERDCANVGKLDILVNNVGTNIRKPSIDYSEEDLEFVLKTNFKSMFELTKLCHKFLKNEKVEGKSHCAGTSSIVNIGSVAGVTCMKSGTPYAATKAAMNQVTGNWACEWGPSGIRVNCVAPWYINTALAQQVLKNEDYKRSVLERTPAGRVGEPEEVASLVAFLCLPGAGYITGQVISVDGGFTRNSF 292
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A7S2WJY4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WJY4_9STRA) HSP 1 Score: 229 bits (585), Expect = 3.620e-67 Identity = 119/220 (54.09%), Postives = 152/220 (69.09%), Query Frame = 3 Query: 3 EWKS-KGLTVHGTAADVITAEGREALVES----VEEHF-DGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644 EW+ G++V G ADV T +GR+ L+E V+EH +G LDIL+NNVGT+IRK TV+YT E+ ++NTN S++ LT+L +P+LK SSVVNI SVAG+T IKSGTPYA++KAAMNQ+T NW CEW PDGIRVN V PWY TPL + V D ++ RTP GR + +EV+G+VAFLC+ AGYIT Q+IS DGGFT NG+ Sbjct: 87 EWREVHGISVDGVVADVSTEKGRQDLIEKAHEFVQEHGKEGTLDILINNVGTNIRKPTVEYTSEDLDFIINTNLKSMYELTKLCHPYLK-----RDKNSTTTSSVVNIGSVAGVTCIKSGTPYAATKAAMNQLTGNWACEWGPDGIRVNCVTPWYINTPLAKQVLQDEEYKRTVLERTPAGRVGEPEEVAGLVAFLCLPRAGYITGQIISVDGGFTRNGY 301
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A7S1YHK1_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YHK1_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.600e-66 Identity = 120/216 (55.56%), Postives = 149/216 (68.98%), Query Frame = 3 Query: 3 EWKSKGLTVHGTAADVITAEGREALVESVEEHF-DGL-LDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644 EWK +G V G ADV T +GR LV +E +G LDILVNNVGT++RK +V+Y+ E+ V NTN S+F LT + + FLK + E SSVVNI SVAG+T +KSGTPYAS+KAAMNQ+T NW CEW PDGIRVN VAPWY TPL + V + + ++ RTPMGR + +EV+G+VAFLC+ AGYIT QVIS DGGFT NG+ Sbjct: 2 EWKEQGCDVIGIVADVSTEDGRTELVTEIEAWLGEGQRLDILVNNVGTNVRKPSVEYSLEDAEFVWNTNLISMFRLTCMCHRFLKRSP-----EEGSTSSVVNIGSVAGVTCMKSGTPYASTKAAMNQLTGNWACEWGPDGIRVNCVAPWYINTPLAQQVLKNEAYKASVLERTPMGRVGEPEEVAGLVAFLCLPIAGYITGQVISVDGGFTKNGY 212
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A6U3WSM2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3WSM2_9STRA) HSP 1 Score: 226 bits (576), Expect = 8.370e-66 Identity = 115/214 (53.74%), Postives = 149/214 (69.63%), Query Frame = 3 Query: 3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644 EW+ KG+ V G ADV T EGREA+V ++E G LDILVNNVGT+IRK T++Y PE+ ++ TNF S+F LT++ +P+L+ + SSVVNI SVAG+T +KSG+PYA +KAAMNQ+T N CEW GIR+N VAPWY TPL + V D + ++ RTP+GR + +EV+GIVAFLC+ AGYIT QVIS DGGFT G+ Sbjct: 87 EWREKGMDVDGVVADVSTPEGREAIVSKIDE-VGGKLDILVNNVGTNIRKPTIEYAPEDLNFILQTNFVSMFELTKMCHPYLRQSYQDRKMT----SSVVNIGSVAGVTCMKSGSPYAITKAAMNQLTGNLACEWGLHGIRINCVAPWYINTPLAKQVLKDEEYKKSVLERTPVGRVGEPEEVAGIVAFLCLPIAGYITGQVISVDGGFTRQGF 295
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A7S0G8Q1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8Q1_9STRA) HSP 1 Score: 224 bits (570), Expect = 3.800e-65 Identity = 122/221 (55.20%), Postives = 148/221 (66.97%), Query Frame = 3 Query: 3 EWKSK-GLTVHGTAADVITAEGREALVESVEEHF-----DGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGG-SSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644 +W+ + L VHG ADV T EGRE L+ E F D LDILVNNVGT+IRK TVDYT EE ++ TNF S+F +++L YP LK +E+G SSVVNI SVAG+T IKSGTPYA++KAAMNQ T N CEW PD IRVN V PWY TPL + V D + ++ RTP GR + DEVS +VAFLC+ AG+IT Q+IS DGGFT NG+ Sbjct: 68 QWRDEQSLDVHGVVADVSTKEGRETLLLKANELFGSGGEDCELDILVNNVGTNIRKKTVDYTEEELEFILGTNFKSMFEMSKLCYPLLKRT------KESGKTSSVVNIGSVAGVTCIKSGTPYAATKAAMNQFTGNLACEWGPDNIRVNCVTPWYINTPLAKQVLKDEAFKRSVLERTPAGRVGEPDEVSSLVAFLCLPCAGFITGQIISVDGGFTRNGF 282 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6623.15348.1 >prot_L-elsbetiae_contig6623.15348.1 ID=prot_L-elsbetiae_contig6623.15348.1|Name=mRNA_L-elsbetiae_contig6623.15348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp MNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSback to top mRNA from alignment at L-elsbetiae_contig6623:5496..9110+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6623.15348.1 ID=mRNA_L-elsbetiae_contig6623.15348.1|Name=mRNA_L-elsbetiae_contig6623.15348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3615bp|location=Sequence derived from alignment at L-elsbetiae_contig6623:5496..9110+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6623:5496..9110+ >mRNA_L-elsbetiae_contig6623.15348.1 ID=mRNA_L-elsbetiae_contig6623.15348.1|Name=mRNA_L-elsbetiae_contig6623.15348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=924bp|location=Sequence derived from alignment at L-elsbetiae_contig6623:5496..9110+ (Laminarionema elsbetiae ELsaHSoW15)back to top |