mRNA_L-elsbetiae_contig6622.15347.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6622.15347.1 vs. uniprot
Match: A0A6H5JNP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP8_9PHAE) HSP 1 Score: 502 bits (1292), Expect = 2.870e-165 Identity = 279/543 (51.38%), Postives = 321/543 (59.12%), Query Frame = 1 Query: 403 MEIATAPCDKAAAAVELFIRSSLVLPRQPAVLIMDAQANQGTKAPPSIISKRNKRFLGDCAGPHGERDLMEVYRDSGLHNMFASYLVLEHAKEDVRFSQEELYKAGKHYPRPMSWHPGPGGHALVADMLFMHYGRVLLGALDRLEAAAPGLSAAQLREKKXXXXXXXXXXXXXXXXXXXXX----MTMPMLREAVGLGGGNKNVSI--VXXXXXXXXXXXXXXXXXXXXEECAYMGAGRGRGVLPTPEWCLNPHCRGAGNYRCANTYYPLAGDKGSRLLDMIVPR---EGHGGSGEGY------LLNGHGKELLVEPAEGRWAVTLNEVSAPAINYMRTGEAPEGFHKPIDAKWVLVGDKSSGPIEFEFVT------------------------------------------------------------------------------------AGAEAADSRVVVCRPDFIARVEFEDPGGVRFSIDGVVTSVVPAESDGISTKSCSVLTAGIAPGRHRLTVEPLRRGEPFVAISHVIYPA 1734 MEIAT C+KAAAAVELFIRSSLVLPR+PA+L++DAQA+QG K ++ RN+RFLG C GP + +LM+ YRD G+HN+FAS L+LE+A D RF+ E LY AGKHYPRPM WHP P GH LVADMLFMHYG++ L A+D LE A+PGL+AA+LREKK ++M LREAVGL G N NV + EC+YMG GRGRGVLP EWC HC+GAGNYRCANTYYPL G++GSRLLDM+V EG GG G L N ++L P+EGRWAVTLNEVS PAI+YM G APEG+HKPID KWVLVGD SGPIEFEF T AG + DSRVVVC+PDFI RV+F DPGGV FSIDGV TSVVPAE DG+ TKSCS+L A + PGRHRL V PLRRGEPFVAISHVIYPA Sbjct: 1 MEIATLACEKAAAAVELFIRSSLVLPRRPAILVLDAQADQGAKGRLKLLKHRNRRFLGYCGGP--KPNLMDAYRDFGVHNIFASSLILEYAAGDERFAHEVLYAAGKHYPRPMKWHPAPAGHELVADMLFMHYGKLFLEAIDLLEQASPGLTAAELREKKEQQGQQPQQERSREHDGSGSSDHGTISMKALREAVGLAGDNPNVFVRRPDDKARRGGGEGEESPIRPPPTECSYMGGGRGRGVLPLAEWCSGAHCQGAGNYRCANTYYPLEGNQGSRLLDMVVSDSDGEGEGGGENGDPGNPVGLFNRDEEKLRASPSEGRWAVTLNEVSRPAIDYMMNGRAPEGYHKPIDVKWVLVGDADSGPIEFEFFTGGVPLDKAIDKVTTRSEAXXXXXXXXXXXVATGVQGVEGAAIHXXXXXXXXXXXXXXXTAVAPVGGQVGVLPLGPVEAAAAAALAGTKVVDSRVVVCKPDFIDRVDFADPGGVVFSIDGVETSVVPAEEDGLMTKSCSLLAAEVGPGRHRLKVVPLRRGEPFVAISHVIYPA 541
BLAST of mRNA_L-elsbetiae_contig6622.15347.1 vs. uniprot
Match: D7FUH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH4_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 5.740e-135 Identity = 220/378 (58.20%), Postives = 258/378 (68.25%), Query Frame = 1 Query: 262 LGRLMAAAGVGYTAINVAMGNTRVVPYSYCVDAHAGLDADVISWSFGMEIATAPCDKAAAAVELFIRSSLVLPRQPAVLIMDAQANQGTKAPPSIISKRNKRFLGDCAGPHGERDLMEVYRDSGLHNMFASYLVLEHAKEDVRFSQEELYKAGKHYPRPMSWHPGPGGHALVADMLFMHYGRVLLGALDRLEAAAPGLSAAQLREKKXXXXXXXXXXXXXXXXXXXXX----MTMPMLREAVGLGGGNKNVSI--VXXXXXXXXXXXXXXXXXXXXEECAYMGAGRGRGVLPTPEWCLNPHCRGAGNYRCANTYYPLAGDKGSRLLDMIVPR---EGHGGSGEGYLLNGHG------KELLVEPAEGRWAVTLNEVSA 1350 +GRLMAAAGVGYTAINVAMGNTR PYSYCVDAHAGLDAD++SWSFGMEIAT PC++AAAAVELF+RSSLVLPR+PA+L++DAQA+QG K ++ RN+RFLG C GP +R+LME YRD G+HN+FAS L+LEHA D RF+ E LY AGKHYPRPM WHP P GH LVADMLFMHYG++ L A+D LE A+PGL+AA+LR+K ++M LREAVGL N NV + EC+YM GRGRGVLP EWC HC+GAGNYRCANTYYPL G++GSRLLDM+V EG GG G N G ++L P+EGRWAVTLNEV A Sbjct: 1 MGRLMAAAGVGYTAINVAMGNTRAAPYSYCVDAHAGLDADIVSWSFGMEIATLPCEEAAAAVELFVRSSLVLPRRPAILVLDAQADQGAKGRLELLKHRNRRFLGYCNGP--KRNLMEAYRDFGVHNIFASSLILEHAAGDERFAHEILYAAGKHYPRPMKWHPAPAGHELVADMLFMHYGKLFLEAIDLLEQASPGLTAAELRDKNEQPGQQPQQEGSRENDGRGSSDHGTISMEALREAVGLARDNPNVFVRRPDGKPRRGGGEGEEPPIRPPPTECSYMAGGRGRGVLPPAEWCSGAHCQGAGNYRCANTYYPLEGNQGSRLLDMVVSDSDGEGEGGGENGDPGNPVGLFSRDEEKLRASPSEGRWAVTLNEVKA 376
BLAST of mRNA_L-elsbetiae_contig6622.15347.1 vs. uniprot
Match: D7FPX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX3_ECTSI) HSP 1 Score: 359 bits (922), Expect = 1.330e-108 Identity = 239/641 (37.29%), Postives = 298/641 (46.49%), Query Frame = 1 Query: 4 RWGSEYESTLFGAASMSWSDGGRVVEDKMLNAVLEQESFVAAFTGERQTKKRVRPPKTDQSRPGNSIAAGHDCLYEQSYPVLLNATLGRLMAAAGVGYTAINVAMGNTRVVPYSYCVDAHAGLDADVISWSFGMEIATAPCDKAAAAVELFIRSSLVLPRQPAVLIMDAQANQGTKAPPSIISKRNKRFLGDCAGPHGERDLMEVYR-DSGLHNMFASYLVLEHAKEDVRFSQEELYKAGKHYPRPMSWHPGPGGHALVADMLFMHYGRVLLGALDRLEAAAPGLSAAQLREKKXXXXXXXXXXXXXXXXXXXXXMTMPMLREAVGLGGGNKNVSIVXXXXXXXXXXXXXXXXXXXXEECAYMGAGRGRGVLPTPEWCLNPH-CRGAGNYRCANTYYPLAGDKGSRLLDMIVPREGHGGSGEGYLLNGHGKELLVEPAEGRWAVTLNEVSAPAINYMRTGEAPEGFHKPIDAKWVLVGDKSSGPIEFEFVTAGAEAA-------------------------------------------------------------DSRVVVCRPDFIARVEFEDPGGVRFSIDGV-VTSVVPAESDGISTKSCSVLTAGIAPGRHRLTVEPLRRGEPFVAISHVIYPA 1734 RWG +Y +T + M +SDGG+VVE+KMLNAV+EQE F+AAFTG S AGHDCL+EQSYPVLLN T GRLMAA GV + AINVAMGNTRV PYSYCV+AHAGL+AD+ISW + +A+ C KAAA +ELF+RS+ VLP++P VL+MDA NQ C H L ++ + D G WH GP GH LVADMLFM Y V L AL+RL PG++AA LR+ L E++GL GG + A+MG GRG +LP P WC C+GAG+YR E VEP++G WAVTLNE + +Y++ P GFH PID KWVLVGD ++GPIEFEF T G A DSRV VC+PDFI RV+F + GVRFS+DG+ V + V G+ +SC++L + GRH + VEPL+ GEP+VAISHV+YPA Sbjct: 184 RWGYKYANTPLFSGGMKFSDGGKVVENKMLNAVVEQEGFLAAFTGV-------------------STTAGHDCLFEQSYPVLLNETFGRLMAATGVKFEAINVAMGNTRVAPYSYCVEAHAGLEADLISWDMTLMVASNECGKAAAGIELFVRSATVLPKRPVVLLMDATPNQDV-----------------CTNGH----LRQIKKLDDG-------------------------------------WHAGPTGHLLVADMLFMAYAEVFLRALERLNGVKPGITAAGLRQLNALSANGRLN-----------------LWESLGLDGGGATDA----RPDLHGEATAADSQSGSNNYPAFMGGGRGD-ILPPPSWCKGYRFCQGAGSYR---------------------------------------SEYFVEPSQGHWAVTLNEEAQSIKDYLKVSP-PRGFHHPIDYKWVLVGDAAAGPIEFEFETLGIPPAGRHRRRRAKVEEGEEEDAHTFSSSAGREEPAPESAGANEEFSNSAGIDAEKTRPTEDATDFDSRVTVCKPDFIDRVQFNETSGVRFSVDGIQVETTVELVQVGLHVQSCALLDVAVGVGRHTVKVEPLKVGEPYVAISHVLYPA 685
BLAST of mRNA_L-elsbetiae_contig6622.15347.1 vs. uniprot
Match: D8LSB3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSB3_ECTSI) HSP 1 Score: 263 bits (673), Expect = 6.010e-76 Identity = 165/441 (37.41%), Postives = 205/441 (46.49%), Query Frame = 1 Query: 610 MEVYRDSGLHNMFASYLVLEHAKEDVRFSQEELYKAG-KHYPRPMSWHPGPGGHALVADMLFMHYGRVLLGALDRLEAAAPGLSAAQLREKKXXXXXXXXXXXXXXXXXXXXXMTMPMLREAVGLGGGNKNVSIVXXXXXXXXXXXXXXXXXXXXEECAYMGAGRGRGVLPTPEWCLN-PHCRGAGNYRCANTYYPLAGDKGSRLLDMIVPREGHGGSGEGYLLNGHGKELLVEPAEGRWAVTLNEVSAPAINYMRTGEAPEGFHKPIDAKWVLVGDKSSGPIEFEFVTAGAEAA----------------------------------------------------------------DSRVVVCRPDFIARVEFEDPGGVRFSIDGVVTSVVPAESDGISTKSCSVLTAGIAPGRHRLTVEPLRRGEPFVAISHVIYPA 1734 MEVYR+ GLH M S LV E+ + F LY A K PRP SWH GP GH LVADMLFMHY V L A+ RLE APG++A QLR+ + LRE +GL + YMG GRG +LP P WC C GAG+YRCANTY+P A KG+RL+ M+ + +LN KE++ EP G WA+TLNE S ++Y++T PEGFH PID K VLVGD +SG IEFEF T G A DSRVV+C+PDFI RV+F D V F +DGVV E ++ SC +L + GRH ++VEPL G P+VA+SH++YPA Sbjct: 1 MEVYREFGLHRMTPSSLVPENTCGNEVFDYHRLYNASLKDIPRPSSWHAGPPGHQLVADMLFMHYAEVFLKAVGRLEDVAPGVTARQLRDSGGEIIPGDAAVSSSERETRESIRDLTSLRETLGL-----------------------VVEAVDDNDNVYMGGGRGD-ILPPPAWCAGWRFCLGAGSYRCANTYFPQAAGKGARLVGMVSAKSP-------AILNLDHKEMIAEPTSGHWAMTLNEESERLLDYLKTFP-PEGFHHPIDLKLVLVGDAASGAIEFEFETIGVPAGTEGWLSEEXXXXXXXXXDDRAEELVDGNXXXXXXXXXXXDEKQEEAGSHRAMQDQLQQMNSMSQDSRVVICKPDFITRVDFTDSTQVTFRVDGVVAIAEELEQGFMTQGSCVILETDVGVGRHTVSVEPLHSGAPYVAVSHLLYPA 409
BLAST of mRNA_L-elsbetiae_contig6622.15347.1 vs. uniprot
Match: A0A835YN73_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN73_9STRA) HSP 1 Score: 196 bits (498), Expect = 6.550e-51 Identity = 113/294 (38.44%), Postives = 163/294 (55.44%), Query Frame = 1 Query: 31 LFGAASMSWSDGGRVVEDKMLNAVLEQESFVAAFTGERQTKKRVRPPKTDQSRPGNSIAAGHDCLYEQSYPVLLNATLGRLMAAAGVGYTAINVAMGNTRVVPYSYCVDAHAGLDADVISWSFGMEIATAPCDKAAAAVELFIRSSLVLPRQPAVLIMDAQANQGT-----KAPPSIISKRNKRFLGDCAGPHGER-----DLMEVYRDSGLHNMFASYLVLEHAKEDVRFSQEELYKAGKHYPRPMSWHPGPGGHALVADMLFMHYGRVLLGALDRLEAAAPGLSAAQLREKK 882 LF A DGG V+ ++L AV+ Q +F AFTG S AGHD L+ QSYP++L L ++ AGV +N AMGNT +PYSYCV+AHAG DV+SW M+I PC + A VE +IR++L LP +P L+++ QA++G +APP++ S ++ +G C G R DLM Y+D G+H++ L+ H F ++ LY PR SWHPGPG H L+A++L +Y +L GAL L+AAAPG++ +L+ ++ Sbjct: 1 LFHNAWYDLPDGGAAVKQRLLRAVVGQRNFTMAFTG-------------------ISNTAGHDNLFAQSYPMVLERLLKPVLQLAGVELRVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMSMQIGNTPCTRTAELVETWIRTALALPSRPVPLLLNCQADRGRCARDREAPPTL-SHTMEKAVGRCVGAERTRGTLQHDLMSWYKDYGIHSLNLETLMAAHTCGYPAFEKKRLYGGKVGTPRTKSWHPGPGAHRLMAEVLAANYLGLLRGALSELDAAAPGVTLQELQARE 274
BLAST of mRNA_L-elsbetiae_contig6622.15347.1 vs. uniprot
Match: A0A835YRS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS9_9STRA) HSP 1 Score: 176 bits (446), Expect = 8.270e-43 Identity = 103/274 (37.59%), Postives = 147/274 (53.65%), Query Frame = 1 Query: 31 LFGAASMSWSDGGRVVEDKMLNAVLEQESFVAAFTGERQTKKRVRPPKTDQSRPGNSIAAGHDCLYEQSYPVLLNATLGRLMAAAGVGYTAINVAMGNTRVVPYSYCVDAHAGLDADVISWSFGMEIATAPCDKAAAAVELFIRSSLVLPRQPAVLIMDAQANQGTKAPPSIISKRNK---RFLGDCAGPHG-----ERDLMEVYRDSGLHNMFASYLVLEHAKEDVRFSQEELYKAGKHYPRPMSWHPGPGGHALVADMLFMHYGRVLLGALD 828 LF A DGGR V+ ++L+A++ Q +F AFTG S AGHD +SYP++L ++ AGV + +N AMGNT +PYSYCV+AHAG DV+SW GME+ C + A AVE +IR+ L LP +P L+++ QA++G A S ++ R +G C G E L + YR+ GLH + +L+ +HA + F++E LY PR SWHPGP GH L+A++L +Y +G LD Sbjct: 15 LFKDAWYDLPDGGRAVKQRLLHAIVHQRNFTMAFTG-------------------ISNTAGHDNRITESYPMVLEQLFKPVLQLAGVNFHVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMGMEVGNRSCRQTAMAVEAWIRAVLSLPSRPVPLLLNCQADRGGCARGSNAPSAHRVFERVVGRCEGKEHSEYTEEHQLTQWYREYGLHGLNLEFLLAKHACGNPLFAKERLYGGKMGTPRTKSWHPGPPGHLLMAEVLMANY----IGLLD 265
BLAST of mRNA_L-elsbetiae_contig6622.15347.1 vs. uniprot
Match: A0A836C824_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C824_9STRA) HSP 1 Score: 130 bits (327), Expect = 5.730e-28 Identity = 81/245 (33.06%), Postives = 123/245 (50.20%), Query Frame = 1 Query: 1 ERWGSEYESTLFGAASMSWSDGGRVVEDKMLNAVLEQESFVAAFTGERQTKKRVRPPKTDQSRPGNSIAAGHDCLYEQSYPVLLNATLGRLMAAAGVGYTAINVAMGNTRVVPYSYCVDAHAGLDADVISWSFGMEIATAPCDKAAAAVELFIRSSLVLPRQPAVLIMDAQANQGTKAPPSIISKRNKRF---LGDCAG--PHGE---RDLMEVYRDSGLHNMFASYLVLEHAKEDVRFSQEELY 711 +++G +Y T+F DGG+ V D+ML A++ Q +F +FTG S AGHD + EQ+YP L + A AGV +TA N A+GN ++PYSYC++AHAG D++SW GM+I C + +E +IR+ + LP QP ++++A + + +S N F G C G P E +D M+ Y+D G+H + L+ D F +E LY Sbjct: 61 DKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTG-------------------ISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLY 286
BLAST of mRNA_L-elsbetiae_contig6622.15347.1 vs. uniprot
Match: A0A6H5JJ65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ65_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 1.270e-13 Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 1 Query: 271 LMAAAGVGYTAINVAMGNTRVVPYSYCVDAHAGLDADVISWSF 399 +M A V YTAINVAMGNTR PYSYCVDAHAGLDAD++SWSF Sbjct: 8 VMPVAEVTYTAINVAMGNTRAAPYSYCVDAHAGLDADIVSWSF 50
BLAST of mRNA_L-elsbetiae_contig6622.15347.1 vs. uniprot
Match: A0A4D9CN98_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CN98_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 4.500e-6 Identity = 57/220 (25.91%), Postives = 87/220 (39.55%), Query Frame = 1 Query: 193 GNSIAAGHDCLYEQSYPVLLNATLGRLMAAAGVGYTAINVAMGNTRVVPYSYCVDAHAGLDADVISWSFGMEIATAPCDKAAAAVELFIRSSLVLPRQPAVLIMDAQANQGTKAPPSIISKRNKRFLGDCAGPHGERDLMEVYRDSGL----HNMFASYLVLEHAKEDVRFSQEELYKAGKHYPRPMSWHPGPGGHALVADMLFMHYGRVLLGALDRLEA 840 G S+ AG D + +S+ V+ + AGV + MG T P +CV+ G + D+ W F ++ +E IRSSL+LP QP +L+ + + R P + YRDSG HN+ S++ L H E + + L+ G P GGH L A++L Y AL+ + A Sbjct: 61 GASVPAGSDTRFNESFSVVWKELMHDTFTMAGVPLVLRSDGMGWTPFQPSYFCVEEMVGPNVDMAVWGFETT------EENDGDLEQLIRSSLLLPSQPHILVCSPLGGEA-------LGARTDPAFAPWVVPG-----TDPYRDSGFSFASHNLTHSFMSLNHLPE---YQSQRLHVTGD-TADPAGRSSSQGGHRLRAEILAWTYLGFFESALEEVHA 258 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6622.15347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6622.15347.1 >prot_L-elsbetiae_contig6622.15347.1 ID=prot_L-elsbetiae_contig6622.15347.1|Name=mRNA_L-elsbetiae_contig6622.15347.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=563bp MSWSDGGRVVEDKMLNAVLEQESFVAAFTGERQTKKRVRPPKTDQSRPGNback to top mRNA from alignment at L-elsbetiae_contig6622:349..8309+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6622.15347.1 ID=mRNA_L-elsbetiae_contig6622.15347.1|Name=mRNA_L-elsbetiae_contig6622.15347.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7961bp|location=Sequence derived from alignment at L-elsbetiae_contig6622:349..8309+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6622:349..8309+ >mRNA_L-elsbetiae_contig6622.15347.1 ID=mRNA_L-elsbetiae_contig6622.15347.1|Name=mRNA_L-elsbetiae_contig6622.15347.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3378bp|location=Sequence derived from alignment at L-elsbetiae_contig6622:349..8309+ (Laminarionema elsbetiae ELsaHSoW15)back to top |