mRNA_L-elsbetiae_contig66.15309.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig66.15309.1
Unique NamemRNA_L-elsbetiae_contig66.15309.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Match: D8LGC8_ECTSI (Thiamine diphosphokinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGC8_ECTSI)

HSP 1 Score: 416 bits (1069), Expect = 2.990e-142
Identity = 222/286 (77.62%), Postives = 240/286 (83.92%), Query Frame = 1
Query:  208 NDRED-GPLALVILNAHGDGESKGLLRHLWGRATLRVCADGGANRLHDSFGGGEDGDCVGDPSEERAQYVPDIIVGDLDSLRPEVARFYEDLGSEIKVRDDQDHCDFEKCLVEVESWLSSSTPSAAXXXXXXXXXXGDGKESRAPAANGPGATVVGLGAFGGRFDHEMQAISLLHAYTSRFHRLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGLRWNLDGRGLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAEFKASAWVEAVSSGDR 1062
            NDR D GPLALVILN  G+GES+GLLRHLWGRA LRVCADGGANRLHDSFGG      V D  ++RA++VPDIIVGDLDSLRPEVARFYE LGSEIK+RDDQDHCDFEKCLVEVES LSS      XXXXXXX          AP     GATVVGLGAFGGRFDHEMQA+SLLHAYTSRFHRLVLMGAGNVAFLL+PGL+HA++PD RFEGPTVGL+PVGGPC+ VTTEGLRWNLDG GLEFGVCVSSSN VV DVVRV TDAPLVWTAEFKA+AW++AVS  + 
Sbjct:   85 NDRLDAGPLALVILNTQGEGESEGLLRHLWGRADLRVCADGGANRLHDSFGGXXXXGDVEDRHQDRARFVPDIIVGDLDSLRPEVARFYEGLGSEIKLRDDQDHCDFEKCLVEVESRLSSPXXXXXXXXXXXXS---------APC----GATVVGLGAFGGRFDHEMQAVSLLHAYTSRFHRLVLMGAGNVAFLLQPGLSHAVQPDSRFEGPTVGLLPVGGPCRAVTTEGLRWNLDGGGLEFGVCVSSSNRVVGDVVRVVTDAPLVWTAEFKAAAWMDAVSFAEN 357          
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Match: A0A836CNJ4_9STRA (Thiamine diphosphokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ4_9STRA)

HSP 1 Score: 220 bits (560), Expect = 2.860e-66
Identity = 126/269 (46.84%), Postives = 156/269 (57.99%), Query Frame = 1
Query:  226 PLALVILNAHGDGESKGL-LRHLWGRATLRVCADGGANRLHDSFGGGEDGDCVGDPSEERAQYVPDIIVGDLDSLRPEVARFYEDLGSEIKVRDDQDHCDFEKCLVEVESWLSSSTPSAAXXXXXXXXXXGDGKESRAPAANGPGATVVGLGAFGGRFDHEMQAISLLHAYTSRFHRLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGLRWNLDGRGLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAEFKAS 1029
            P A+++LN  G+     L LR  W  A+LR+CADGGAN L+DS G            + R+ ++PD++VGDLDSLRPEVA +Y D G+ I    DQD  DFEKCL +V   L+S+  +A                           TVV LGAFGGRFD EM A  LL+ YT  F R VL+G GNV+FLL P   H I PD R EGP  GL+P+G PC +VTT GL W+L  + L FG  VSSSN +    V V TDAP+VWT  F A+
Sbjct:   40 PTAIIVLNNVGEDSGSSLFLRSAWHSASLRLCADGGANSLYDSLG-----------EQNRSLFLPDMVVGDLDSLRPEVADYYRDSGAAIVKVSDQDRNDFEKCLQQV---LASAGAAARD------------------------TTVVALGAFGGRFDQEMAAFHLLYQYTHAFRRFVLLGGGNVSFLLLPDRRHRIVPDPRMEGPFCGLLPIGNPCGSVTTSGLMWDLHQQPLAFGGRVSSSNRIAAAEVEVVTDAPVVWTMSFGAA 270          
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Match: A0A835ZF58_9STRA (Thiamine pyrophosphokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF58_9STRA)

HSP 1 Score: 215 bits (547), Expect = 8.410e-65
Identity = 127/265 (47.92%), Postives = 155/265 (58.49%), Query Frame = 1
Query:  229 LALVILNAHG-DGE-SKGLLRHLWGRATLRVCADGGANRLHDSFGGGEDGDCVGDPSEERAQYVPDIIVGDLDSLRPEVARFYEDLGSEIKVRDDQDHCDFEKCLVEVESWLSSSTPSAAXXXXXXXXXXGDGKESRAPAANGPGATVVGLGAFGGRFDHEMQAISLLHAYTSRFHRLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGLRWNLDGRGLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAE 1017
            LA+++LN  G DG  SK  ++H W  A+LRVCADGGAN L+D   G           E+R  Y+PD+I GDLDSLRP+VAR+YED G  I    DQDH DFEKC+ E+    + ST +A                           T+V +GA GGRFD EM A  LLH YT+ F   VL+G GN++FLL PG  H I P    EGPT GL+P+G P   VT+ GLRW+L  + L FG  VSSSN +    V VTTDAPLVWT E
Sbjct:   18 LAVIVLNNLGSDGNGSKHFIKHAWSTASLRVCADGGANGLYDILEG-----------EDRDAYLPDVIKGDLDSLRPDVARYYEDRGVNIIQAADQDHNDFEKCVREILH-RAGSTAAAT--------------------------TLVAVGAHGGRFDQEMAAFHLLHKYTAHFEHFVLLGNGNLSFLLLPGRTHRICPHPPREGPTCGLLPLGQPAARVTSRGLRWDLRAQPLAFGAFVSSSNALEAREVSVTTDAPLVWTIE 244          
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Match: A0A7S4B1H2_CHRCT (Thiamine diphosphokinase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B1H2_CHRCT)

HSP 1 Score: 193 bits (490), Expect = 7.990e-56
Identity = 121/270 (44.81%), Postives = 156/270 (57.78%), Query Frame = 1
Query:  229 LALVILNAHGDGESKGL-LRHLWGRATLRVCADGGANRLHDSFGGGEDGDCVGDPSEERAQYVPDIIVGDLDSLRPEVARFYEDLGSEIKVRDDQDHCDFEKCLVEVESWLSSSTPSAAXXXXXXXXXXGDGKESRAPAANGPGATVVGLGAFGGRFDHEMQAISLLHAYTSRFHRLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGLRWNLDGR-GLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAEFKASA 1032
            LALV+LN  G  ++  L L  LW  A LR+CADG ANRLHDS G             ER+Q +PD+I GDLDSLR +VA +Y + G  I+ + DQD  DFEKCL+    WL                           A +G   +VV  GAFGGR DH M  +++++ Y S F R +L+   ++AF L+PG+ + IEP+L  E  + GLIP+GG C+ V T GLRWNLDG   LEFG  VSSSN +V D V V TD PL+WT+ F  S+
Sbjct:   55 LALVLLNIDGGVDTDRLSLGGLWSMANLRICADGAANRLHDSLG-----------HNERSQMLPDVISGDLDSLRGDVADYYREHGVSIEHQADQDSHDFEKCLM----WLRQRQ-----------------------AEDGIRFSVVAYGAFGGRLDHMMANMNMVYKY-SCFERFILLTRHSLAFQLKPGM-NIIEPNLDVENGSCGLIPLGGRCEGVITTGLRWNLDGTVPLEFGSLVSSSNRIVGDQVTVQTDTPLLWTSNFVTSS 284          
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Match: A0A7S2V3Z0_9STRA (Thiamine diphosphokinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z0_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.080e-55
Identity = 119/280 (42.50%), Postives = 154/280 (55.00%), Query Frame = 1
Query:  232 ALVILNAHGDGESKGLLRHLWGRATLRVCADGGANRLHDSF-----GGGEDGDCVGDPSEERAQYVPDIIVGDLDSLRPEVARFYEDLGSEIKVRDDQDHC-DFEKCLVEVESWLSSSTPSAAXXXXXXXXXXGDGKESRAPAANGPGATVVGLGAFGGRFDHEMQAISLLHAYTSRFHRLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGLRWNLDGRGLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAEFKASAWVEAVSS 1053
            ALVILN +  G+S      LW  +T R+CADGGANRL+D         GE+      P E   +YVPD+I GDLDSLRP+V  FY+ LG+ I +RD    C DF K L E+ S      P +                           TV+ LGAFGGRFD EM AI+ L+ +   F RL+L+   N+ FLL PG  H + P+   EGPT GL+PVGG C+ VTT GL+W+L  + L FG  VSSSN +   VV V T  PL+W +E K  +W +  ++
Sbjct:   73 ALVILNTNCCGDS---FERLWSLSTFRICADGGANRLYDMVVKLARKRGEN------PKELVRKYVPDVIKGDLDSLRPDVGSFYQSLGTRI-IRDRDQSCNDFYKALSELRSMQLEQYPLSRM-------------------------TVMALGAFGGRFDQEMAAINALYEWDQVFERLLLLSEQNLGFLLSPG-RHRVVPNTLVEGPTCGLLPVGGACRGVTTRGLKWDLKDQVLRFGGLVSSSNRLAAKVVEVQTRDPLLWMSEIKPESWAKLAAA 316          
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Match: A0A7S3YA89_HETAK (Thiamine diphosphokinase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA89_HETAK)

HSP 1 Score: 189 bits (479), Expect = 1.870e-53
Identity = 118/286 (41.26%), Postives = 154/286 (53.85%), Query Frame = 1
Query:  193 VEGVVNDREDGPLALVILNAHGDGESKGLLRHLWGRATLRVCADGGANRLHDSF--GGGEDGDCVGDPSEERAQYVPDIIVGDLDSLRPEVARFYEDLGSEIKVRDDQDHCDFEKCLVEVESWLSSSTPSAAXXXXXXXXXXGDGKESRAPAANGPGATVVGLGAFGGRFDHEMQAISLLHAYT---SRFHRLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGLRWNLDGRGLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAEFKASAW 1035
            +EG+ N+ +D   AL++LN     +S    R LWG +T R+CADGGANRLHDS    GGE           RA++VP  I GDLDSLRPEV  FY  LG+EI    DQD  DF+KCL E  +   +  P                         G   T + LGAFGGRFD EM A+     +    SR  R+VL+   N+  LL PG  H + P+   EGPT GL+P+GGP  ++TT GL+WNL    + FG  +S+SN ++  VV VTT  PL+W  +   + W
Sbjct:   90 MEGICNN-DDEIFALIVLNTDCCTQS---FRRLWGLSTFRLCADGGANRLHDSLRAAGGE-----------RARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARARRDAHFP-------------------------GRRLTALALGAFGGRFDQEMAAVHACFEFQRGGSR-DRVVLLSDENLGLLLGPG-RHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQLHPAGW 333          
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Match: A0A6G0XFX2_9STRA (Thiamine pyrophosphokinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFX2_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.710e-51
Identity = 108/268 (40.30%), Postives = 145/268 (54.10%), Query Frame = 1
Query:  220 DGPLALVILNAHGDGESKGLLRHLWGRATLRVCADGGANRLHDSFGGGEDGDCVGDPSEERAQYVPDIIVGDLDSLRPEVARFYEDLGSEIKVRDDQDHCDFEKCLVEVESWLSSSTPSAAXXXXXXXXXXGDGKESRAPAANGPGATVVGLGAFGGRFDHEMQAISLLHAYTSRFHRLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGLRWNLDGRGLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAEFK 1023
            D PLAL+++N  G   S     HLW +A + VCADGGAN+L+D                    YVP  I GDLDS+RP+VA ++E LG+++    DQD  D +KCL  +++       + A               S  PA       V+ +GA GGRFD EMQ ++ L  ++S F R+ L+     A LL PG  H+I P+   EG T GL+P+GGPC+++TT GL+WNL      FG  VS+SN V+ D V V T  PLVWT E K
Sbjct:   32 DDPLALIVINGIGLVSS---FDHLWKKAKITVCADGGANKLYDHI----------QKDSMTRTYVPQYIKGDLDSIRPDVASYFETLGTQVIKDPDQDSNDLDKCLSLLQNLQEEFKATEA---------------SNTPAK----LNVLVIGAMGGRFDQEMQNVNALFQWSSIFDRMTLVSDSTSATLLVPG-KHSIRPNFTVEGRTCGLVPIGGPCKSLTTSGLKWNLTNHETFFGGLVSTSNHVLGDEVLVETSDPLVWTTELK 266          
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Match: A0A1Y1ZDD7_9FUNG (Thiamine pyrophosphokinase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZDD7_9FUNG)

HSP 1 Score: 178 bits (451), Expect = 1.670e-50
Identity = 103/268 (38.43%), Postives = 146/268 (54.48%), Query Frame = 1
Query:  226 PLALVILNAHGDGESKGLLRHLWGRATLRVCADGGANRLHDSFGGGEDGDCVGDPSEERAQYVPDIIVGDLDSLRPEVARFYEDLGSEIKVRDDQDHCDFEKCLVEVESWLSSSTPSAAXXXXXXXXXXGDGKESRAPAANGPGATVVGLGAFGGRFDHEMQAISLLHAYTSRFHRLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGLRWNLDGRGLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAEFKAS 1029
            P A+V+LN     ++  + +H+W RA++R+CADGG NRLHD+F G          +E+  +Y+PD +VGD DS+RPEV  FYE  G  IK  +DQ   DF KC+  V                         +E      N     +VG+GA GGRFD  M +I +LH       ++ L+   +  FLL+ G  H I  +   EGPT GL+P+G     +TTEGLRWNLD    EFG  VS+SN++   +++V T+ P+VWT E K++
Sbjct:   17 PFAVVVLNQPIPHKNT-IFKHIWKRASIRLCADGGTNRLHDAFSG----------TEDLEKYIPDYVVGDFDSIRPEVKEFYEKKGVTIKKVEDQYSTDFTKCVNIV-------------------------RERELERPNETPYDIVGMGAIGGRFDQTMSSIQMLHMLKDE-RKVYLISDDSSTFLLDKG-KHEIICNREIEGPTCGLLPIGFEKTVLTTEGLRWNLDQTVTEFGGLVSTSNIIDSHIIKVETNKPVVWTIELKST 246          
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Match: A0A7S0IUR0_9EUKA (Thiamine pyrophosphokinase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IUR0_9EUKA)

HSP 1 Score: 176 bits (446), Expect = 1.610e-49
Identity = 114/266 (42.86%), Postives = 140/266 (52.63%), Query Frame = 1
Query:  229 LALVILNAHGDGE-SKGLLRHLWGRATLRVCADGGANRLHDSFGGGEDGDCVGDPSEERAQYVPDIIVGDLDSLRPEVARFYEDLGSEIKVRDDQDHCDFEKCLVEVESWLSSSTPSAAXXXXXXXXXXGDGKESRAPAANGPGATVVGLGAFGGRFDHEMQAISLLHAYTSRFHRLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGLRWNLDG-RGLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAEF 1020
            LALV+LN  G+ +     L HLW  A +R+CADG ANRLHD+                R   +PD+I GDLDSLR EVA FY   G  I+   DQD  DFEKCL    +WL    PS                 S  P       TVV  GAFGGR D     I++++ Y   F R VL+   + AFLL  G  + IEP+L  E  + GL+P+G  C+ V T GL+W+LDG R LEFG  VSSSN +V   V V T  PL+WT  F
Sbjct:   25 LALVLLNIDGESDLGHPTLSHLWSNAAVRLCADGAANRLHDAL-----------DDRARDMMLPDLIRGDLDSLRHEVADFYRRNGVAIEHEPDQDSHDFEKCL----TWLQQRQPS-----------------SEVPF------TVVAFGAFGGRLDQTFANINMVYRYRC-FERFVLLTKHSAAFLLPAG-HNVIEPNLEIESGSCGLLPLGCRCEGVVTSGLKWDLDGSRPLEFGSLVSSSNQIVSSKVTVETSVPLLWTTNF 250          
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Match: A0A8J5XDA2_DIALT (Thiamine pyrophosphokinase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDA2_DIALT)

HSP 1 Score: 174 bits (440), Expect = 1.290e-48
Identity = 110/274 (40.15%), Postives = 143/274 (52.19%), Query Frame = 1
Query:  229 LALVILNAHG----DGESKGLLRHLWGRATLRVCADGGANRLHDSFGGGEDGDCVGDPSEERAQYVPDIIVGDLDSLRPEVARFYEDLGSEIKVRDDQDHCDFEKCLVEVESWLSSSTPSAAXXXXXXXXXXGDGKESRAPAANGPGA---TVVGLGAFGGRFDHEMQAISLLHAYTSRFHRLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGLRWNLDGRGLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAEFKAS 1029
            +ALV LN+ G          +    W  A +RVCADG ANRLHD              +E RA +VPD+I GDLDSLR +V  FY + G  I+   D+DH D +KCL+ +                       D +  +A A   PGA   TVV LGAFGGR D +M  +++L  +   F +L+L+   + AFLL PG  H IEP+   E    GL+P+G PC +V T GLRWNL  + L FG  VS+SN VV   V V TD  L+WT   + S
Sbjct:   28 VALVFLNSEGAQAGSAAPDSIFERAWRCARVRVCADGAANRLHDGLR----------TNERRAAFVPDLIKGDLDSLRTDVRAFYAERGVRIEQDTDEDHHDLDKCLMALR----------------------DEQAEQARAL--PGAERMTVVVLGAFGGRLDQQMANLNMLFRWQGAFAQLLLLSEHSAAFLLAPG-EHTIEPNAEVESAVCGLVPLGAPCASVRTSGLRWNLCDQPLAFGGMVSTSNEVVGREVHVQTDGALLWTTVLRGS 266          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig66.15309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGC8_ECTSI2.990e-14277.62Thiamine diphosphokinase n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CNJ4_9STRA2.860e-6646.84Thiamine diphosphokinase n=1 Tax=Tribonema minus T... [more]
A0A835ZF58_9STRA8.410e-6547.92Thiamine pyrophosphokinase n=1 Tax=Tribonema minus... [more]
A0A7S4B1H2_CHRCT7.990e-5644.81Thiamine diphosphokinase n=1 Tax=Chrysotila carter... [more]
A0A7S2V3Z0_9STRA1.080e-5542.50Thiamine diphosphokinase n=1 Tax=Fibrocapsa japoni... [more]
A0A7S3YA89_HETAK1.870e-5341.26Thiamine diphosphokinase (Fragment) n=1 Tax=Hetero... [more]
A0A6G0XFX2_9STRA2.710e-5140.30Thiamine pyrophosphokinase n=1 Tax=Aphanomyces eut... [more]
A0A1Y1ZDD7_9FUNG1.670e-5038.43Thiamine pyrophosphokinase n=1 Tax=Basidiobolus me... [more]
A0A7S0IUR0_9EUKA1.610e-4942.86Thiamine pyrophosphokinase n=1 Tax=Calcidiscus lep... [more]
A0A8J5XDA2_DIALT1.290e-4840.15Thiamine pyrophosphokinase n=1 Tax=Diacronema luth... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig66contigL-elsbetiae_contig66:1406..2518 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score421.8
Seed ortholog evalue3.2e-115
Seed eggNOG ortholog2880.D8LGC8
Preferred nameTPK1
KEGG rclassRC00002,RC00004,RC00017,RC00037
KEGG koko:K00784,ko:K00949,ko:K08851,ko:K13511
KEGG ReactionR00619,R09037
KEGG Pathwayko00564,ko00730,ko01100,ko03013,map00564,map00730,map01100,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004788,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016462,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0036172,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043094,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044715,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Belongs to the thiamine pyrophosphokinase family
EggNOG OGsCOG1564@1,KOG3153@2759
EC2.7.11.1,2.7.6.2,3.1.26.11
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko01004,ko03016
Ec32 ortholog descriptionThiamin pyrophosphokinase, catalytic domain
Ec32 orthologEc-06_002580.1
Exons2
Model size1068
Cds size1068
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816729.3656118-CDS-L-elsbetiae_contig66:1405..19821622816729.3656118-CDS-L-elsbetiae_contig66:1405..1982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 1406..1982 +
1691683770.3893278-CDS-L-elsbetiae_contig66:1405..19821691683770.3893278-CDS-L-elsbetiae_contig66:1405..1982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 1406..1982 +
1622816729.380589-CDS-L-elsbetiae_contig66:2027..25181622816729.380589-CDS-L-elsbetiae_contig66:2027..2518Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 2028..2518 +
1691683770.4063485-CDS-L-elsbetiae_contig66:2027..25181691683770.4063485-CDS-L-elsbetiae_contig66:2027..2518Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig66 2028..2518 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig66.15309.1prot_L-elsbetiae_contig66.15309.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig66 1406..2518 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig66.15309.1

>prot_L-elsbetiae_contig66.15309.1 ID=prot_L-elsbetiae_contig66.15309.1|Name=mRNA_L-elsbetiae_contig66.15309.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=356bp
PVKRHHNSFLLTLQHQQRAQGIGATHSATPTAVARKGKERGQAGGDSTAH
GSRGNNGEVAAAAAVEGVVNDREDGPLALVILNAHGDGESKGLLRHLWGR
ATLRVCADGGANRLHDSFGGGEDGDCVGDPSEERAQYVPDIIVGDLDSLR
PEVARFYEDLGSEIKVRDDQDHCDFEKCLVEVESWLSSSTPSAAAAAHDG
GGGDGDGKESRAPAANGPGATVVGLGAFGGRFDHEMQAISLLHAYTSRFH
RLVLMGAGNVAFLLEPGLAHAIEPDLRFEGPTVGLIPVGGPCQTVTTEGL
RWNLDGRGLEFGVCVSSSNLVVEDVVRVTTDAPLVWTAEFKASAWVEAVS
SGDRV*
back to top

mRNA from alignment at L-elsbetiae_contig66:1406..2518+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig66.15309.1 ID=mRNA_L-elsbetiae_contig66.15309.1|Name=mRNA_L-elsbetiae_contig66.15309.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1113bp|location=Sequence derived from alignment at L-elsbetiae_contig66:1406..2518+ (Laminarionema elsbetiae ELsaHSoW15)
CCTGTGAAGCGGCATCATAACAGCTTTCTGCTGACACTGCAACATCAACA ACGGGCACAGGGGATAGGAGCGACGCACTCCGCAACACCGACAGCAGTAG CTCGCAAGGGGAAGGAACGAGGTCAAGCGGGGGGCGACAGCACCGCGCAC GGAAGTCGTGGCAACAACGGCGAGGTAGCAGCCGCTGCAGCCGTAGAAGG GGTAGTAAATGATCGCGAAGACGGCCCTCTCGCGCTTGTTATCCTCAACG CGCATGGCGACGGCGAGAGCAAGGGCTTGCTCCGCCACCTCTGGGGCAGG GCGACTCTCCGGGTCTGCGCCGACGGTGGCGCCAACCGGCTCCACGACAG CTTTGGCGGTGGCGAAGACGGCGATTGCGTGGGGGACCCGTCGGAGGAGC GGGCGCAGTACGTGCCCGACATCATCGTGGGCGACCTAGACTCCCTTCGG CCGGAGGTGGCCCGTTTCTACGAAGATCTGGGCTCCGAGATTAAGGTTCG CGATGACCAGGACCACTGCGACTTCGAGAAGTGCTTGGTAGAGGTCGAGA GCTGGCTGTCGTCGTCAACGCCGTCTGGTGCCGCCGCTGGGCGCGGCGTA GAGACCGGAGCGTCGGCTGCAGCCGCCGCCGCCGCCCACGACGGTGGCGG CGGCGACGGCGACGGCAAAGAATCGCGCGCCCCGGCCGCTAACGGCCCCG GCGCTACCGTGGTGGGCCTCGGGGCGTTCGGCGGCCGCTTCGACCACGAG ATGCAGGCCATCAGCCTCCTGCACGCTTACACCTCTCGCTTCCACCGGCT GGTGCTCATGGGGGCTGGCAACGTGGCGTTCCTCCTGGAGCCAGGGCTCG CCCACGCCATAGAGCCGGATCTGAGGTTCGAGGGGCCGACGGTCGGCCTG ATACCCGTCGGCGGCCCTTGTCAAACGGTGACCACGGAGGGGCTGCGGTG GAACCTGGACGGCCGCGGGTTAGAGTTCGGCGTCTGCGTGAGCTCGTCGA ACCTCGTGGTGGAAGACGTGGTCCGGGTGACGACGGACGCTCCGCTCGTC TGGACGGCAGAATTTAAGGCCTCGGCGTGGGTCGAGGCGGTTTCTTCGGG TGACCGCGTTTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig66:1406..2518+

>mRNA_L-elsbetiae_contig66.15309.1 ID=mRNA_L-elsbetiae_contig66.15309.1|Name=mRNA_L-elsbetiae_contig66.15309.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2136bp|location=Sequence derived from alignment at L-elsbetiae_contig66:1406..2518+ (Laminarionema elsbetiae ELsaHSoW15)
CCTGTGAAGCGGCATCATAACAGCTTTCTGCTGACACTGCAACATCAACA
ACGGGCACAGGGGATAGGAGCGACGCACTCCGCAACACCGACAGCAGTAG
CTCGCAAGGGGAAGGAACGAGGTCAAGCGGGGGGCGACAGCACCGCGCAC
GGAAGTCGTGGCAACAACGGCGAGGTAGCAGCCGCTGCAGCCGTAGAAGG
GGTAGTAAATGATCGCGAAGACGGCCCTCTCGCGCTTGTTATCCTCAACG
CGCATGGCGACGGCGAGAGCAAGGGCTTGCTCCGCCACCTCTGGGGCAGG
GCGACTCTCCGGGTCTGCGCCGACGGTGGCGCCAACCGGCTCCACGACAG
CTTTGGCGGTGGCGAAGACGGCGATTGCGTGGGGGACCCGTCGGAGGAGC
GGGCGCAGTACGTGCCCGACATCATCGTGGGCGACCTAGACTCCCTTCGG
CCGGAGGTGGCCCGTTTCTACGAAGATCTGGGCTCCGAGATTAAGGTTCG
CGATGACCAGGACCACTGCGACTTCGAGAAGTGCTTGGTAGAGGTCGAGA
GCTGGCTGTCGTCGTCAACGCCGTCTGCCTGTGAAGCGGCATCATAACAG
CTTTCTGCTGACACTGCAACATCAACAACGGGCACAGGGGATAGGAGCGA
CGCACTCCGCAACACCGACAGCAGTAGCTCGCAAGGGGAAGGAACGAGGT
CAAGCGGGGGGCGACAGCACCGCGCACGGAAGTCGTGGCAACAACGGCGA
GGTAGCAGCCGCTGCAGCCGTAGAAGGGGTAGTAAATGATCGCGAAGACG
GCCCTCTCGCGCTTGTTATCCTCAACGCGCATGGCGACGGCGAGAGCAAG
GGCTTGCTCCGCCACCTCTGGGGCAGGGCGACTCTCCGGGTCTGCGCCGA
CGGTGGCGCCAACCGGCTCCACGACAGCTTTGGCGGTGGCGAAGACGGCG
ATTGCGTGGGGGACCCGTCGGAGGAGCGGGCGCAGTACGTGCCCGACATC
ATCGTGGGCGACCTAGACTCCCTTCGGCCGGAGGTGGCCCGTTTCTACGA
AGATCTGGGCTCCGAGATTAAGGTTCGCGATGACCAGGACCACTGCGACT
TCGAGAAGTGCTTGGTAGAGGTCGAGAGCTGGCTGTCGTCGTCAACGCCG
TCTGCCGCCGCCGCCGCCCACGACGGTGGCGGCGGCGACGGCGACGGCAA
AGAATCGCGCGCCCCGGCCGCTAACGGCCCCGGCGCTACCGTGGTGGGCC
TCGGGGCGTTCGGCGGCCGCTTCGACCACGAGATGCAGGCCATCAGCCTC
CTGCACGCTTACACCTCTCGCTTCCACCGGCTGGTGCTCATGGGGGCTGG
CAACGTGGCGTTCCTCCTGGAGCCAGGGCTCGCCCACGCCATAGAGCCGG
ATCTGAGGTTCGAGGGGCCGACGGTCGGCCTGATACCCGTCGGCGGCCCT
TGTCAAACGGTGACCACGGAGGGGCTGCGGTGGAACCTGGACGGCCGCGG
GTTAGAGTTCGGCGTCTGCGTGAGCTCGTCGAACCTCGTGGTGGAAGACG
TGGTCCGGGTGACGACGGACGCTCCGCTCGTCTGGACGGCAGAATTTAAG
GCCTCGGCGTGGGTCGAGGCGGTTTCTTCGGGTGACCGCGTTTGACCGCC
GCCGCCGCCCACGACGGTGGCGGCGGCGACGGCGACGGCAAAGAATCGCG
CGCCCCGGCCGCTAACGGCCCCGGCGCTACCGTGGTGGGCCTCGGGGCGT
TCGGCGGCCGCTTCGACCACGAGATGCAGGCCATCAGCCTCCTGCACGCT
TACACCTCTCGCTTCCACCGGCTGGTGCTCATGGGGGCTGGCAACGTGGC
GTTCCTCCTGGAGCCAGGGCTCGCCCACGCCATAGAGCCGGATCTGAGGT
TCGAGGGGCCGACGGTCGGCCTGATACCCGTCGGCGGCCCTTGTCAAACG
GTGACCACGGAGGGGCTGCGGTGGAACCTGGACGGCCGCGGGTTAGAGTT
CGGCGTCTGCGTGAGCTCGTCGAACCTCGTGGTGGAAGACGTGGTCCGGG
TGACGACGGACGCTCCGCTCGTCTGGACGGCAGAATTTAAGGCCTCGGCG
TGGGTCGAGGCGGTTTCTTCGGGTGACCGCGTTTGA
back to top