mRNA_L-elsbetiae_contig6593.15300.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Match: A0A6H5KGJ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ6_9PHAE) HSP 1 Score: 134 bits (337), Expect = 3.000e-36 Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 3 Query: 327 VAIWRVVLRSYPDXXXXXXXXXXXXXXXXXXXXXXXXXVLPRRDYKASFWWNMLGETGLQDPGSTEARLFRRRFRIPYQFFRELIKLVQEKKWFSIREKDVAGRPCIPVELKVL 668 V+ WRVVLRS+PD VLPR DY+ASFWW MLGETGL++P S EA+LFRRRFRIPYQFF EL++LV++KKWF +R+KDVAGR CIPVELKV+ Sbjct: 25 VSTWRVVLRSFPDGDELEDEGLGGGSPVKRTRR-----VLPRPDYRASFWWRMLGETGLKEPVSREAKLFRRRFRIPYQFFTELMELVKKKKWFPMRKKDVAGRMCIPVELKVM 133
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Match: A0A6H5KL26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL26_9PHAE) HSP 1 Score: 133 bits (335), Expect = 8.580e-36 Identity = 67/116 (57.76%), Postives = 80/116 (68.97%), Query Frame = 3 Query: 312 KLVRTVAIWRVVLRSYPDXXXXXXXXXXXXXXXXXXXXXXXXXVLPRRDYKASFWWNMLGETGLQDPGSTEARLFRRRFRIPYQFFRELIKLVQEKKWFSIREKDVAGRPCIPVEL 659 + V TV+ WRVVLRS+PD VLPR DY+ASFWW MLGETGL++P S E +LFRRRFRIPYQFF EL++LV+EKKWF +R++DVAGR CIPVEL Sbjct: 36 RAVLTVSAWRVVLRSFPDDDELEDEGLGGGPPVKRARR-----VLPRPDYRASFWWRMLGETGLKEPASREGKLFRRRFRIPYQFFTELVELVKEKKWFPMRKQDVAGRMCIPVEL 146
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Match: A0A6H5JQ76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ76_9PHAE) HSP 1 Score: 132 bits (332), Expect = 2.590e-34 Identity = 99/220 (45.00%), Postives = 130/220 (59.09%), Query Frame = 3 Query: 18 SVPDSRRNVGVYLVGKRGPKCPDEIKLCSQQTVIVGSRRVVVAGSHATTRRTHTHT*PHAHPHTPSAMDVASSGRDSSKRHEQLAVXXXXXXXXXXXX---KLVRTVAIWRVVLRSYPDXXXXXXXXXXXXXXXXXXXXXXXXXVLPRRDYKASFWWNMLGETGLQDPGSTEARLFRRRFRIPYQFFRELIKLVQEKKWFSIREKDVAGRPCIPVELKVL 668 S P+++R +G+Y+V + GP D + + + T VGS R++ + + P T AM+ AS+ DS XXXXXXXXXXXX + V T+A WRVVLRS+ D VLPR +Y+ASFWW MLGETGL++P S +A+LFRRRFRIPYQFF EL++LV+ KKWF +R+K VAGR IPVELKV+ Sbjct: 17 SGPEAQRKLGIYIVWESGPDVADGLFVLIEHTEFVGSHRILPERQPSVACVCTSFPAPSTD-WTGCAMEHASAADDSGSXXXXXXXXXXXXXXXXXXXXRQRAVLTMATWRVVLRSFLDGDELEDEGLGGGSPVKRPRR-----VLPRPEYRASFWWCMLGETGLKEPASRDAKLFRRRFRIPYQFFTELMELVK-KKWFPVRKKGVAGRMRIPVELKVM 229
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Match: A0A6H5KPT7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT7_9PHAE) HSP 1 Score: 128 bits (321), Expect = 1.210e-33 Identity = 82/151 (54.30%), Postives = 96/151 (63.58%), Query Frame = 3 Query: 216 AMDVASSGRDSSKRHEQLAVXXXXXXXXXXXXKLVRTVAIWRVVLRSYPDXXXXXXXXXXXXXXXXXXXXXXXXXVLPRRDYKASFWWNMLGETGLQDPGSTEARLFRRRFRIPYQFFRELIKLVQEKKWFSIREKDVAGRPCIPVELKVL 668 A SG D + XXXXXXXXXXX + V TVA WRVVLRS+PD VLPR DY+ASFWW MLGETGL++P S E +LFR RFRIPYQF EL++LV++KK F +R+KDVAGR CIPVELKV+ Sbjct: 4 ASAAGDSGSDDERHAXXXXXXXXXXXXXXXXQRAVLTVATWRVVLRSFPDGDELEDEGLGGGSPVKRTRR-----VLPRPDYRASFWWRMLGETGLKEPASREVKLFRGRFRIPYQFLTELMELVKKKKRFPMRKKDVAGRMCIPVELKVM 149
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Match: A0A6H5KQT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQT0_9PHAE) HSP 1 Score: 112 bits (280), Expect = 1.350e-27 Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 3 Query: 312 KLVRTVAIWRVVLRSYPDXXXXXXXXXXXXXXXXXXXXXXXXXVLPRRDYKASFWWNMLGETGLQDPGSTEARLFRRRFRIPYQFFRELIKLVQEKKWFSIREK 623 + V TVA WRVVLRS+PD VLPR DY+ASFWW MLGETGL++P S EA+LFRRRFRIPYQFF EL++LV++KKWF +R++ Sbjct: 36 RAVLTVATWRVVLRSFPDGDELEDEGLDGGSPVKRTRR-----VLPRPDYRASFWWRMLGETGLKEPASREAKLFRRRFRIPYQFFTELMELVKKKKWFPMRKR 134
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 103 bits (257), Expect = 3.400e-22 Identity = 52/103 (50.49%), Postives = 68/103 (66.02%), Query Frame = 3 Query: 441 VLPRRDYKASFWWNMLGETGLQDPGSTEARLFRRRFRIPYQFFRELIKLVQEKKWFSIREKDVAGRPCIPVELKVLASLHILGRGNFFEDMSQASHMSESVIQ 749 V RRD++ S WW L + L D + A++FR RFR+PY FF+EL+KL + K+WFS EKD A R IP+ELKVL G+GN F+D+ Q S MSES+ Q Sbjct: 65 VTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQ 161
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.240e-20 Identity = 58/148 (39.19%), Postives = 76/148 (51.35%), Query Frame = 3 Query: 312 KLVRTVAIWRVVLRSYPDXXXXXXXXXXXXXXXXXXXXXXXXXVLPRRDYKASFWWNML---GETGLQDPGSTEARLFRRRFRIPYQFFRELIKLVQEKKWFSIREKDVAGRPCIPVELKVLASLHILGRGNFFEDMSQASHMSESVI 746 +L R+VA+W V++ + D V R+DY S WW L ETG D + EAR FR FR+PY FF L++LV+++ WF E DV GR +PVELKVLA L IL RGN F D+ S +S + Sbjct: 61 QLQRSVAVWDVIMEDFEDDLELDTEDDEASREVKRRR------VYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTV 202
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Match: A0A6H5JRQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ7_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 1.770e-19 Identity = 52/108 (48.15%), Postives = 69/108 (63.89%), Query Frame = 3 Query: 441 VLPRRDYKASFWWNMLGETGL-QDPGSTEARLFRRRFRIPYQFFRELIKLVQEKKW--FSIREKDVAGRP---CIPVELKVLASLHILGRGNFFEDMSQASHMSESVI 746 V PR DY+ W ML + L QDP + EA+ FRRRFR+PY FF L+ V+ W F+ E ++ GR CIPVE KVLA L ILGRGN+F+D+S+ + M E+ + Sbjct: 55 VRPRADYRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATV 162
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 2.030e-18 Identity = 52/108 (48.15%), Postives = 69/108 (63.89%), Query Frame = 3 Query: 441 VLPRRDYKASFWWNMLGETGL-QDPGSTEARLFRRRFRIPYQFFRELIKLVQEKKW--FSIREKDVAGRP---CIPVELKVLASLHILGRGNFFEDMSQASHMSESVI 746 V PR DY+ W ML + L QDP + EA+ FRRRFR+PY FF L+ V+ W F+ E ++ GR CIPVE KVLA L ILGRGN+F+D+S+ + M E+ + Sbjct: 55 VRPRADYRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATV 162
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Match: A0A835ZAS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS0_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 6.720e-18 Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 441 VLPRRDYKASFWWNML-GETGLQDPGSTEARLFRRRFRIPYQFFRELIKLVQEKKWFSIREKDVAGRPCIPVELKVLASL 677 V R DY+ + W ML E L DP S EA+ FRRRFR+PY F+EL+ LV+EK W + DVAGRPCIP+ELKV +L Sbjct: 41 VYERPDYRRTAWMTMLDNEAQLLDPTSREAKKFRRRFRLPYPMFKELVALVREKGWLPCADADVAGRPCIPLELKVHCTL 120 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6593.15300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6593.15300.1 >prot_L-elsbetiae_contig6593.15300.1 ID=prot_L-elsbetiae_contig6593.15300.1|Name=mRNA_L-elsbetiae_contig6593.15300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp MDVASSGRDSSKRHEQLAVLLAAAMRRRRERKLVRTVAIWRVVLRSYPDDback to top mRNA from alignment at L-elsbetiae_contig6593:8972..10922- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6593.15300.1 ID=mRNA_L-elsbetiae_contig6593.15300.1|Name=mRNA_L-elsbetiae_contig6593.15300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1951bp|location=Sequence derived from alignment at L-elsbetiae_contig6593:8972..10922- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6593:8972..10922- >mRNA_L-elsbetiae_contig6593.15300.1 ID=mRNA_L-elsbetiae_contig6593.15300.1|Name=mRNA_L-elsbetiae_contig6593.15300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1068bp|location=Sequence derived from alignment at L-elsbetiae_contig6593:8972..10922- (Laminarionema elsbetiae ELsaHSoW15)back to top |