|
Homology
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A6H5L7M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7M1_9PHAE) HSP 1 Score: 268 bits (685), Expect = 8.090e-84 Identity = 182/213 (85.45%), Postives = 186/213 (87.32%), Query Frame = 1
Query: 58 MADSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVA-------RCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSVA 675
MADSKR RISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADK DK+ GTG+A K XXXXXXXXXXXXXXXXX RCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIE+LEEERE+ S KVY LEEELR VA
Sbjct: 1 MADSKRARISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKADKDKGTGAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREMHSTKVYALEEELRLVA 213
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: D7FZA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA5_ECTSI) HSP 1 Score: 265 bits (677), Expect = 9.020e-81 Identity = 181/216 (83.80%), Postives = 186/216 (86.11%), Query Frame = 1
Query: 58 MADSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVAR--------CQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSVASK 681
MADSKRVRISKREGALMARLSAKEQE+YEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADK DK+ G G+A XXXXXXXXXXXXXXXXX CQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIE+LEEEREV S KVY LEEELR VAS+
Sbjct: 1 MADSKRVRISKREGALMARLSAKEQEIYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKADKDKGKGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREVHSTKVYALEEELRLVASQ 216
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A836CAD3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAD3_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 4.450e-12 Identity = 39/80 (48.75%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 64 DSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAEL 303
+ K+ R++ REGA+M RL+AK+ ++ ++Q+ DL ++ P DF RQ +TDPA+NVEFQL+ +QL EME LR EA+L
Sbjct: 5 EPKKARLTAREGAMMMRLAAKDADMADMQSYVVDLAVSKTPSVDFTRQHFTDPAVNVEFQLMRSQLVEMEKKLRTAEAQL 84
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A7S3ERR7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ERR7_9EUKA) HSP 1 Score: 65.5 bits (158), Expect = 1.100e-8 Identity = 64/211 (30.33%), Postives = 98/211 (46.45%), Query Frame = 1
Query: 52 ELMADSKRVRIS-----KREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRS 669
EL A +R ++ +RE AL+ RL+ KE+E E+Q R+L +A RP T ++ DPA+N E L Q+ KEA+ E + + + +GS GK L+ +C+ L+ ENE+L V +L +E A+ + YA ELK AL E E++EQ+ EE +V + + L E S
Sbjct: 29 ELRATERRSQLEVAQQRRRESALLLRLALKEREARELQTQVRELRQAMRPATSQVSKLLLDPAVNAEIMQLRQQV---------KEAQAMEHAAKQELEANQFQSGSIA----GKK--------------------LIQKCKELQAENEQLGKDLSEGSVQKLKTEAALQKEYAQELKKALLETREWVEQMHEELDVSQSMIIQLRRERNS 206
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: UPI0015919C08 (pre-mRNA-splicing regulator WTAP n=2 Tax=Bifurcata TaxID=1329961 RepID=UPI0015919C08) HSP 1 Score: 62.4 bits (150), Expect = 5.780e-7 Identity = 56/203 (27.59%), Postives = 97/203 (47.78%), Query Frame = 1
Query: 85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSVASKRRHY 693
++RE L+ RL+ KEQE+ E + L + ++P R DPAIN+ F + A+L + ++ L + EL + T PD + G L+A+C+ L QEN+EL ++AQL +E A+ + Y+ ELK++ +E ++I QL+EE E + + L+++L+ + Y
Sbjct: 70 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLKETRQQLVQY 239
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A6A4RW61_SCOMX (Pre-mRNA-splicing regulator WTAP n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4RW61_SCOMX) HSP 1 Score: 62.8 bits (151), Expect = 7.380e-7 Identity = 56/202 (27.72%), Postives = 97/202 (48.02%), Query Frame = 1
Query: 85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSVASKRRH 690
++RE L+ RL+ KEQE+ E + L + ++P R DPAIN+ F + A+L + ++ L + EL + T PD + G L+A+C+ L QEN+EL ++AQL +E A+ + Y+ ELK++ +E ++I QL+EE E + + L+++L+ + H
Sbjct: 94 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSAAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLKETRQQLSH 262
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A8D3B3T0_SCOMX (Pre-mRNA-splicing regulator WTAP n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3B3T0_SCOMX) HSP 1 Score: 62.8 bits (151), Expect = 7.500e-7 Identity = 56/202 (27.72%), Postives = 97/202 (48.02%), Query Frame = 1
Query: 85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSVASKRRH 690
++RE L+ RL+ KEQE+ E + L + ++P R DPAIN+ F + A+L + ++ L + EL + T PD + G L+A+C+ L QEN+EL ++AQL +E A+ + Y+ ELK++ +E ++I QL+EE E + + L+++L+ + H
Sbjct: 163 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSAAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLKETRQQLSH 331
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A556TT27_BAGYA (Pre-mRNA-splicing regulator WTAP n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556TT27_BAGYA) HSP 1 Score: 62.0 bits (149), Expect = 8.210e-7 Identity = 56/196 (28.57%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSV 672
++RE L+ RL+ KEQE+ E + L + ++P R DPAIN+ F + A+L + ++ L + EL + T PD + G L+A+C+ L QEN+EL ++AQL +E A+ + Y+ ELK++ +E ++I QL+EE E + + L+++LR
Sbjct: 70 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLRET 232
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: FL2D_DANRE (Pre-mRNA-splicing regulator WTAP n=8 Tax=Cyprinoidei TaxID=30727 RepID=FL2D_DANRE) HSP 1 Score: 62.0 bits (149), Expect = 8.290e-7 Identity = 56/196 (28.57%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSV 672
++RE L+ RL+ KEQE+ E + L + ++P R DPAIN+ F + A+L + ++ L + EL + T PD + G L+A+C+ L QEN+EL ++AQL +E A+ + Y+ ELK++ +E ++I QL+EE E + + L+++LR
Sbjct: 70 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSAAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLRET 232
BLAST of mRNA_L-elsbetiae_contig6580.15285.1 vs. uniprot
Match: A0A2D0PZM5_ICTPU (Pre-mRNA-splicing regulator WTAP n=11 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0PZM5_ICTPU) HSP 1 Score: 62.0 bits (149), Expect = 8.380e-7 Identity = 56/196 (28.57%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 85 SKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGSAVKGPDGKAGXXXXXXXXXXXXXXXXXSALVARCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEEELRSV 672
++RE L+ RL+ KEQE+ E + L + ++P R DPAIN+ F + A+L + ++ L + EL + T PD + G L+A+C+ L QEN+EL ++AQL +E A+ + Y+ ELK++ +E ++I QL+EE E + + L+++LR
Sbjct: 76 ARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAWKFT----------------PDSQTG-----------------KKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLRET 238
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 272.3 |
Seed ortholog evalue | 3.5e-70 |
Seed eggNOG ortholog | 2880.D7FZA5 |
Preferred name | WTAP |
KEGG rclass | RC00004,RC00326 |
KEGG ko | ko:K00626 |
KEGG Reaction | R00238,R01177 |
KEGG Pathway | ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 |
KEGG Module | M00088,M00095,M00373,M00374,M00375 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000375,GO:0000381,GO:0001510,GO:0001654,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005911,GO:0006139,GO:0006325,GO:0006342,GO:0006355,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0007423,GO:0007530,GO:0007538,GO:0007539,GO:0007542,GO:0008150,GO:0008152,GO:0008380,GO:0009451,GO:0009506,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010073,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016556,GO:0016604,GO:0016607,GO:0018992,GO:0018993,GO:0019099,GO:0019219,GO:0019222,GO:0022414,GO:0030054,GO:0030237,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0034401,GO:0034641,GO:0034708,GO:0036396,GO:0040029,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043484,GO:0043621,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045293,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048024,GO:0048507,GO:0048513,GO:0048519,GO:0048523,GO:0048731,GO:0048749,GO:0048856,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0055044,GO:0060255,GO:0065007,GO:0070013,GO:0070828,GO:0070868,GO:0071704,GO:0071840,GO:0080009,GO:0080090,GO:0090304,GO:0097549,GO:1901360,GO:1902494,GO:1902679,GO:1903311,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2001141 |
EggNOG free text desc. | mRNA methylation |
EggNOG OGs | KOG2991@1,KOG2991@2759 |
EC | 2.3.1.9 |
COG Functional cat. | O |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000,ko04147 |
Ec32 ortholog description | expressed unknown protein |
Ec32 ortholog | Ec-19_000190.1 |
Exons | 7 |
Model size | 1239 |
Cds size | 1182 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816726.9626455-CDS-L-elsbetiae_contig6580:3729..4348 | 1622816726.9626455-CDS-L-elsbetiae_contig6580:3729..4348 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 3730..4348 - |
1691683768.757817-CDS-L-elsbetiae_contig6580:3729..4348 | 1691683768.757817-CDS-L-elsbetiae_contig6580:3729..4348 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 3730..4348 - |
1622816726.9759555-CDS-L-elsbetiae_contig6580:5906..6012 | 1622816726.9759555-CDS-L-elsbetiae_contig6580:5906..6012 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 5907..6012 - |
1691683768.77117-CDS-L-elsbetiae_contig6580:5906..6012 | 1691683768.77117-CDS-L-elsbetiae_contig6580:5906..6012 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 5907..6012 - |
1622816726.9906466-CDS-L-elsbetiae_contig6580:6908..7083 | 1622816726.9906466-CDS-L-elsbetiae_contig6580:6908..7083 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 6909..7083 - |
1691683768.7839274-CDS-L-elsbetiae_contig6580:6908..7083 | 1691683768.7839274-CDS-L-elsbetiae_contig6580:6908..7083 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 6909..7083 - |
1622816727.002885-CDS-L-elsbetiae_contig6580:8022..8092 | 1622816727.002885-CDS-L-elsbetiae_contig6580:8022..8092 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 8023..8092 - |
1691683768.7951267-CDS-L-elsbetiae_contig6580:8022..8092 | 1691683768.7951267-CDS-L-elsbetiae_contig6580:8022..8092 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 8023..8092 - |
1622816727.0241363-CDS-L-elsbetiae_contig6580:8291..8378 | 1622816727.0241363-CDS-L-elsbetiae_contig6580:8291..8378 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 8292..8378 - |
1691683768.807273-CDS-L-elsbetiae_contig6580:8291..8378 | 1691683768.807273-CDS-L-elsbetiae_contig6580:8291..8378 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 8292..8378 - |
1622816727.0350633-CDS-L-elsbetiae_contig6580:9501..9578 | 1622816727.0350633-CDS-L-elsbetiae_contig6580:9501..9578 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 9502..9578 - |
1691683768.8204274-CDS-L-elsbetiae_contig6580:9501..9578 | 1691683768.8204274-CDS-L-elsbetiae_contig6580:9501..9578 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 9502..9578 - |
1622816727.0480092-CDS-L-elsbetiae_contig6580:10347..10395 | 1622816727.0480092-CDS-L-elsbetiae_contig6580:10347..10395 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 10348..10395 - |
1691683768.8302336-CDS-L-elsbetiae_contig6580:10347..10395 | 1691683768.8302336-CDS-L-elsbetiae_contig6580:10347..10395 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6580 10348..10395 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816727.0596757-UTR-L-elsbetiae_contig6580:10395..10452 | 1622816727.0596757-UTR-L-elsbetiae_contig6580:10395..10452 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6580 10396..10452 - |
1691683768.8402677-UTR-L-elsbetiae_contig6580:10395..10452 | 1691683768.8402677-UTR-L-elsbetiae_contig6580:10395..10452 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6580 10396..10452 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6580.15285.1 >prot_L-elsbetiae_contig6580.15285.1 ID=prot_L-elsbetiae_contig6580.15285.1|Name=mRNA_L-elsbetiae_contig6580.15285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=394bp
MADSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQ VYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKKDKETGTGS AVKGPDGKAGAGSGAAGASGESTAARASALVARCQRLEQENEELAASADV AKVAQLTSEKAVAEAYAGELKTALEEAYEYIEQLEEEREVQSNKVYGLEE ELRSVASKRRHYEDQQQQQQQQQQQQQQQQQQGNPSWGEDAHDQHEHQQH QHPHHGGEGHHEGGEEVGKRDSSSRPGSNSSSGYRDRDPDAPPPPPPEAE AEVEADTAPPGDGDDMDDLYGDMNMDAIGGTFLPDEGGGQAGQEDLVVKD DPMQQEEEEEEEEEEEEEQEKMEDTPPPPARGRNTRRSTRSRK* back to topmRNA from alignment at L-elsbetiae_contig6580:3730..10452- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6580.15285.1 ID=mRNA_L-elsbetiae_contig6580.15285.1|Name=mRNA_L-elsbetiae_contig6580.15285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6723bp|location=Sequence derived from alignment at L-elsbetiae_contig6580:3730..10452- (Laminarionema elsbetiae ELsaHSoW15) GCGGCAACCTAACTTCTGGTCTGTGCGCAGCCACAACAGTCAGGAGCCGG
CGAACTCATGGCGGACTCGAAGCGTGTGCGTATATCCAAGAGGGAAGGAG
CCCTGGTGAGGAAAATCGGTATATTGTAGCGTATGTACAAGTCCTCTCAC
CTCCCGCGACGGTACATACCGTAGGTGACACAATATACCACACCCCCTGG
ACCGACTTTTAGAGCTTCATTACTCCGTAGCGAAGAGGGTGTCAGCACCA
AGCAACACCTTTTCGGGCAGACTTCGATTATATATTTCCAACGCCATCTC
TTTCGGCACTGGCACTCCTCTTGCTGGGGAGGAATCGAGCTTTGAAAAAC
TGTCCAGGGGGGGGGGGGGTGGTATCTTGTGCCATGCTCGCGATCCACGG
CTCCCTCCCACGCTCTGTGTTTCAATTGTTGCCTGTGGGTGTAATCTATT
GATGGCCGGTGTGGGAAAATACCCATGCCAAGAACCAACGCCAGCGCAGA
AATCGGCTTTGCTAGTTTTTTCGGGGTGGGGACAGAAACAGCAGTGAAAC
AGTTTAGTTTCCGGAGAAGGAGCGCGGGAGATCCGATCTCCCCTCTTGTT
GTCAGACCTACTGTAGGTGTAGATAGTGCTGCAGTCTCTGTCGGTGTAAA
ATGTATTACACACGATCAAGTCGACTGATATCCTCCCTTCTCCTCGTACC
ATGTATGCAGGTGAGGTGCGTGAGTAAATATACAGTTGTGTACGAATAGT
AAACAGCAGGTTATAGAGCACGGTGTAGACTATACACACAACAACAACGC
TCTTTCACGTTTCGACCCCAAGTCATGTAGACTTGGCAACAACCTTGCAA
TGTGTCGGTGTTGGTTTGATTCAGATGGCACGGCTGTCGGCGAAGGAGCA
GGAGGTGTACGAGGTGCAGGCATCGGCCCGGGATCTCTACAGAGCCAGAA
GGTGTGCACTTGAATTTCCTCTCCATACAAATTACAGCAGGACCGTAGTG
CAGCAGCATTACATACCAGTACTACCGTACCTCAAGTTGCATCGGTTTTG
TCTCTACGGTTTTCAACCTGTGGGTGGGGTCGCACTAGATATTCACCTCT
CTGACTCGTGTGGCGATCACGTCGTGTTGAAATCCACATGTGTACAGCTT
GCTTTGCGTGTCGTAGGTGACACAAGATATCACCCCCCCTCGACCGACTT
TTAGAGCTCCATTTACTCCGTAACGAAGAGGGTGCCAGCACCAACCGACA
TATTTTCGGACAGCCCTCGACTAGGTCTTTTCAACGCCCCCCTATTTCGG
CACTGACACTCTTCTTGCTGGGGAGGGATTGAGCTTTGAAAATCTGTCCA
GGGGGGGTGGCATCTTGTGTCAACTACGGTAGGCTTATCTCGCACATGCA
TTTAGATACTTGCTGGGGGTTTGGTCATGTGATCAAGTCCTTGAAGGGGG
GGTGAAGGAGGGGTTACCTCACCCGCTACCTCCTTGCGCCTTAGACCTTT
GAAGACTATCGCAGGTTGTACATCTTCCGTGGCACAACCAACTAGCGAAT
ACTATTAGATTTAGTTTCGGCCAAAACAGGTGAACGGTTAGATGAGAAAC
AACAAGCAGTCTGCGCAGTTTAAACATGGATGGGTCGCGTGTCAGAAAAG
ACGCGACCGTTTGTATGATGCCTGCTTGGGACCGTCGGTTCAAAATAGTA
CTTGTTGGCCGACCTCGCACATCTTTGCAGGGGTGATGTTGAACTCTTCT
GATATTTTGGGTTGTTTTTCTGCTCGCTTCGCCAAATATTACGTCACTGT
ATGGAATACCGTTTGAACCCCATATCGAGTCCTTGCTCTAGTGTGGAGTA
GGTTCCATCTTTGATTCATTGATTATTTTTATAAAGTTGTGGGGGTGTAC
ACCAACCACTCAGCCGCGCATCGACGCGTGTGCCAACACCACGGACAGGT
GTTGCCACAGCAGCAGCAGCAGCAGCCACTGTACCTGGTCTACTCAAATT
TTCTACCCCGCCCTGGTCTCACGTCTCTGCTTCCCTTGTGCCGGCCACCA
TCGTGCCTGTACATTATTACACAGGCCAGTGACAGATTTCGCGCGGCAAG
TGTACACGGATCCTGCCATCAACGTAGAGTTTCAGCTTCTGACCGCGCAG
CTAGCCGAAATGTGAGTTGCGAAGTCTCCTTCTCTCGCCACTTCCTTGCT
TTTTTTCTGAGCACCTCATGAGCACCGGAGACAAGCTGTACCGTGCCGCT
TTCCGTCTAGGCGCTTTTGCTTCGATTGACTGCATGGCGCTGCCTTCGCT
CCATTTGTTGCACGGCAGTTATCTTCAAAGGTTGGTGTTGGTTTAATTAT
CTGATAACAGGGAAAATTCGTTACGGCTGAAAGAGGCGGAGCTGAAGGAG
CTTCGCACGACAGCCGACAAGAAGGACAAGGTGTGTGTGTGTGAGCGTGA
GCGTGAGTAAGACCGTAGACCACATCGGTATCCGGTAATCTACGCAGGTT
TTTGTTCGGCGAAACATATGGGATAAAGTATGGAATCGGGGAATATTTGG
GCTGTCGGTGGTTAGGGTTAGGGTTAGGGTTACGGAACCCCTACCACCCT
ATTTCACATATAAATCAATATCCCCCGTTTTTTCTCGTGAAGGCAGTCCT
CGGTATTCGGTATCGTCCCCATGGATAAATTAGGTATTCAGTCGAATTAA
GTGTTGGAATAGGATGCACACAGGGAGGTACTGAGTGGAGACATCGGAAC
GGTTTTTAATGTGAAGAAACAGCAATTCGAGACAGCTCGCCATGTATATG
GCGGCTGTTCTCGCTGTGGTATTTTTTCTTCTTTTTTTCTTTTTTTTCTT
GTTCACGTTTATTTCCAGTGCTCGATGGGCTCCCTGTCGCGAGGACATCT
TGCCAGAGTATTGAACCGTGGTCACACAGAAGGGTTCCTTTCCCCAAGGC
CCCCACTCCCCCCGTCTGCGGTGGTTGCCTGAGATTTTTTTCGCGAGAAG
GGTTCAGCCGTCCCTTTCCCTCGTCGACGGTGAGGTCGAAGTTTTGAAGT
TTTGGCCTTGATCAAATGCCGAGTCGCGCTGCAGGGCCGTCACCCAGGGT
ACGCGGGTGCAGTGGTTTGATGTCGTGACGTGCGTGCACGATGCTTGCGT
TTGCGGTGCGATGCGAACGTTCTCTGTCCTGCTTGTCGTGCGTGTGGCTG
GCTGTCTTATCTACGTTCGATTCCAGCGATGCCCAGGCCCCGTACGAGCT
TTCCCCAACACCGCCCCGCTGTGGAGGCAAATCACGGCTAGCTCCAATTG
TTTCTTTATACTGCTGTTGTTGCCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCATCCAGGAAACGGGGACAGGGTCTGCGGTCAAGGGAC
CCGACGGCAAAGCCGGCGCAGGAAGCGGCGCCGCCGGCGCTAGCGGAGAG
AGCACGGCGGCGAGGGCGTCTGCTCTGGTGGCTCGATGTCAGCGGCTGGA
GCAGGAAAACGAGGAGCTCGCCGCGTCTGCCGACGTTGCCAAAGGTGCTT
TAGTCGTTTGCTGTTTTTGGTGGTGGTGGTGTCTGGGATACTCGATTATT
TATCTTGTTTGTTTTTTCTCGTCTTTCCGTTCTTTGTTCCCCTTGTCGTC
TGGTGTAGAGTGAGGCTTGAATCATTCGTGTGGTGCGCTTTGTCGGAGAA
CCTTCTGGTATATTTGTGTTTTTTCGTGTGTGTTAGTTCAGTCTCCGCCG
TCGTTGTTGTTGTTGTGCTGTCTTTCTTAAAAAATAAACAATGAATCAAA
GATGGAACCTACCCCACACTAGAGCAAGGACTCCATATGGGGTTCAAACG
GTATTCCATACAGAGACGTAATGTTTGGCGAAGCGAGCAGAAAAACAACC
TAAACTATCAGAAGAGTTCAACATCCCCCCTGCAAAGGTTGTAAGATTTG
CGAGGTCGGCTAACAATTATTCAGGCTGTCTTTATTGTCTCTCTAGCTGC
CGAATTAACGAGACAACGACAATGGTATAGTCTATGCGCGCAAGAAGCCA
AGCCGTCCAGCATTGAGAGGCTCATGGTGTCACGGTGTCAAGCTCGGGCT
TAATTTGTCATATGCGCCCTTTTCTGCCGTGTCCGGTCCTGTCATGTTAG
CAAGCGCCATCACATCGCCGTTACGGTCGTGCCCAGTAGTGTGAGTTGCA
TAACCCTGCAGCTGCTTCTATCAGCGCGATGTACGAACGGCATGTCCGAG
CCGAGACACCAGAAGACGAACCCTAACCTTTCTGCCGCGTTCTTCGAGTT
GACCCGTATCGATACCCATGCCCATTCCCGTACCCGTGTTGTAACCGCTG
CTGGTTGCTTTCGTTGCCGTTGCCGGGCTGGTTCCCTTGCACCGCCTTGC
ATACCACCGCACCACCACCACCACCACCACGCCGGTGCAGTGGCACAGCT
CACAAGCGAAAAGGCTGTCGCGGAAGCCTACGCAGGAGAGCTCAAGACCG
CTCTCGAGGAGGCGTACGAGTACATCGAGCAGCTCGAAGAGGAGAGGTGC
GTAGATACAGTATATGTGTGTGTGTGTGTGTGATCTTATTATCTTTGGAG
CCACCGCTGATCGACCTTCTCGTCCTTAGGTTCCTCCTCGGTGCAGGTGG
TGACTACATACCATCCTCTCGAGCGATATCCCAGCACTTAGCATGATACT
CGGGTAGCGGGAGTTGAAGTCCACCGAGATGACACCCTTGGCTACATACT
TATGTGTGTATGTGTATGTTGTCTTCACATTAAAACCCGTTCCGATCTCT
CCATCCAGTACCTCTCCATGTCCGGACTAATCCAACACTTGATGCGGCCT
ATCCCGTGGTCATAGGCTAACTTATACCCAAGAAAAGGTACACGAAACAT
CTGTACATACCTTTATCTTTGCGCAAGTCGACCTAACTTATACCCAAGAA
AAGGTACACGAAACATCTGTACATACCTTTATCTTTGCGCAAGTCGAACA
GTTGCAATCCCTCCCCACGCTACTGGTTGCATTAGCATATAGCTGTACCC
TCAAGCACTACGGGATCGAATTGTCGGCCGAACGTATTCGTTGTATTATG
TATGTCCGAGCTGTTAGGTCTCGTCGCTTCGGTTGGTTGCCTGGGTCGTT
GGTTCTTACGATATGATAAGTATGTGGAGGTGTCGAGAGCTGCTCTCTTA
TCCAAGAGAGGTTTTGTTATCTTGTGGACCGTTTACTGCTCGTCTTCGGT
GGAGACGCTGGAAAAGGCGCAAGCCATTTTTTTATTTTCCCTCCCATTAT
TGGCATATTTGTCGTCTGCTCCACTGGCATGCATCGCTCATCCTAAAACC
TTTTCTGAGGCTGAGAAGCGTTGCACCATACTGTATAGCAGTACGAGACC
GTCCGAGCTGGACTTGACTTTCTAAACTCCCTGGTCACGTGTGTTTGAGT
TGAAGAGTCGCAAAGGGTTCCGTTTTATGTTTACCGCGATGCAGCTGCTG
TTCAGGTTTCCACCGGAGAGCCAACCAGTATTTTTGTCGTCCACTGCTTC
AGTTATCTCTTTTCATGTTCTAGATGCAGCTAAAAAGCTGTCGAATACGA
ACCAGGGCCGGCATGCGATCGATGTGCCACCAAACAAACACCACAAGTAC
TGCCAGACACAAAGCCCGGTTCGGCAAGCATACCGTAATCATGCGAAGGT
TCGCACCCCCGTGTTAGCATTTTTCTATAGCGTATTTCTCCACAACCAGG
AGGGCTATAGAAAAACGCTAACACGGGGTGCGAACCTTCGCATGATTACG
ATACTACAGCAGTATTTTGTATTTTTTACTTATGTAGCGGATGGATCTAC
TCGGACCGCTCTCCGCATTTTTTTTTTCTTCACACGTATTTCCAGTGCTC
GATGGGCTCCCTGTCACGAGGACATCTTGCCAGAGTATTGAACCGTGGTA
ACGCAGAAGGAGGGTTCCTATTGAGCCGTTGCTTTGCCTTGACCGCAGAA
TCGCAATCTGACCCCTTTTTGGCCGCGCCACGGTCGGTGTTTTACGCCTA
TTCGTGTTTTACGTCTTTTTGTATCTGTCTATATTATATGGCTTGATCGA
TCAGGGAAGTGCAGAGCAATAAGGTGTACGGCCTGGAAGAAGAACTCCGC
TCGGTCGCGTCAAAGCGCCGTCACTACGAGGACCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGAAACCCGTCTT
GGGGGGAAGATGCCCACGACCAGCACGAGCACCAACAGCACCAACACCCG
CACCATGGCGGGGAAGGGCACCACGAGGGCGGCGAGGAGGTGGGCAAGCG
CGACAGCAGCAGCAGGCCGGGAAGCAACAGCAGCAGCGGCTACCGTGATC
GCGATCCGGATGCCCCGCCGCCCCCGCCGCCCGAAGCCGAAGCCGAAGTC
GAAGCCGACACCGCGCCCCCCGGAGACGGTGATGACATGGACGACCTCTA
CGGCGACATGAACATGGACGCTATCGGGGGCACGTTCTTGCCTGATGAGG
GCGGCGGCCAGGCCGGCCAAGAGGATCTGGTTGTCAAGGATGACCCCATG
CAGCAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGCAGGA
AAAGATGGAGGATACCCCGCCGCCCCCCGCGAGGGGGAGAAATACGAGAC
GCTCGACGCGAAGCAGAAAATAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6580:3730..10452- >mRNA_L-elsbetiae_contig6580.15285.1 ID=mRNA_L-elsbetiae_contig6580.15285.1|Name=mRNA_L-elsbetiae_contig6580.15285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2364bp|location=Sequence derived from alignment at L-elsbetiae_contig6580:3730..10452- (Laminarionema elsbetiae ELsaHSoW15) ATGGCGGACTCGAAGCGTGTGCGTATATCCAAGAGGGAAGGAGCCCTGAT GGCGGACTCGAAGCGTGTGCGTATATCCAAGAGGGAAGGAGCCCTGATGG CACGGCTGTCGGCGAAGGAGCAGGAGGTGTACGAGGTGCAGGCATCGGCC CGGGATCTCTACAGAGCCAGAAGATGGCACGGCTGTCGGCGAAGGAGCAG GAGGTGTACGAGGTGCAGGCATCGGCCCGGGATCTCTACAGAGCCAGAAG GCCAGTGACAGATTTCGCGCGGCAAGTGTACACGGATCCTGCCATCAACG TAGAGTTTCAGCTTCTGACCGCGCAGCTAGCCGAAATGCCAGTGACAGAT TTCGCGCGGCAAGTGTACACGGATCCTGCCATCAACGTAGAGTTTCAGCT TCTGACCGCGCAGCTAGCCGAAATGGAAAATTCGTTACGGCTGAAAGAGG CGGAGCTGAAGGAGCTTCGCACGACAGCCGACAAGAAGGACAAGGGAAAA TTCGTTACGGCTGAAAGAGGCGGAGCTGAAGGAGCTTCGCACGACAGCCG ACAAGAAGGACAAGGAAACGGGGACAGGGTCTGCGGTCAAGGGACCCGAC GGCAAAGCCGGCGCAGGAAGCGGCGCCGCCGGCGCTAGCGGAGAGAGCAC GGCGGCGAGGGCGTCTGCTCTGGTGGCTCGATGTCAGCGGCTGGAGCAGG AAAACGAGGAGCTCGCCGCGTCTGCCGACGTTGCCAAAGGAAACGGGGAC AGGGTCTGCGGTCAAGGGACCCGACGGCAAAGCCGGCGCAGGAAGCGGCG CCGCCGGCGCTAGCGGAGAGAGCACGGCGGCGAGGGCGTCTGCTCTGGTG GCTCGATGTCAGCGGCTGGAGCAGGAAAACGAGGAGCTCGCCGCGTCTGC CGACGTTGCCAAAGTGGCACAGCTCACAAGCGAAAAGGCTGTCGCGGAAG CCTACGCAGGAGAGCTCAAGACCGCTCTCGAGGAGGCGTACGAGTACATC GAGCAGCTCGAAGAGGAGAGTGGCACAGCTCACAAGCGAAAAGGCTGTCG CGGAAGCCTACGCAGGAGAGCTCAAGACCGCTCTCGAGGAGGCGTACGAG TACATCGAGCAGCTCGAAGAGGAGAGGGAAGTGCAGAGCAATAAGGTGTA CGGCCTGGAAGAAGAACTCCGCTCGGTCGCGTCAAAGCGCCGTCACTACG AGGACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCAGCAGGGAAACCCGTCTTGGGGGGAAGATGCCCACGACCAGCACGA GCACCAACAGCACCAACACCCGCACCATGGCGGGGAAGGGCACCACGAGG GCGGCGAGGAGGTGGGCAAGCGCGACAGCAGCAGCAGGCCGGGAAGCAAC AGCAGCAGCGGCTACCGTGATCGCGATCCGGATGCCCCGCCGCCCCCGCC GCCCGAAGCCGAAGCCGAAGTCGAAGCCGACACCGCGCCCCCCGGAGACG GTGATGACATGGACGACCTCTACGGCGACATGAACATGGACGCTATCGGG GGCACGTTCTTGCCTGATGAGGGCGGCGGCCAGGCCGGCCAAGAGGATCT GGTTGTCAAGGATGACCCCATGCAGCAAGAGGAGGAGGAGGAGGAGGAGG AGGAGGAGGAAGAGGAGCAGGAAAAGATGGAGGATACCCCGCCGCCCCCC GCGAGGGGGAGAAATACGAGACGCTCGACGCGAAGCAGAAAATAGGGAAG TGCAGAGCAATAAGGTGTACGGCCTGGAAGAAGAACTCCGCTCGGTCGCG TCAAAGCGCCGTCACTACGAGGACCAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGGGAAACCCGTCTTGGGGGGAAG ATGCCCACGACCAGCACGAGCACCAACAGCACCAACACCCGCACCATGGC GGGGAAGGGCACCACGAGGGCGGCGAGGAGGTGGGCAAGCGCGACAGCAG CAGCAGGCCGGGAAGCAACAGCAGCAGCGGCTACCGTGATCGCGATCCGG ATGCCCCGCCGCCCCCGCCGCCCGAAGCCGAAGCCGAAGTCGAAGCCGAC ACCGCGCCCCCCGGAGACGGTGATGACATGGACGACCTCTACGGCGACAT GAACATGGACGCTATCGGGGGCACGTTCTTGCCTGATGAGGGCGGCGGCC AGGCCGGCCAAGAGGATCTGGTTGTCAAGGATGACCCCATGCAGCAAGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGCAGGAAAAGATGGA GGATACCCCGCCGCCCCCCGCGAGGGGGAGAAATACGAGACGCTCGACGC GAAGCAGAAAATAG back to top
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