mRNA_L-elsbetiae_contig658.15283.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig658.15283.1 vs. uniprot
Match: A0A6H5J6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H7_9PHAE) HSP 1 Score: 593 bits (1530), Expect = 1.100e-172 Identity = 816/1946 (41.93%), Postives = 968/1946 (49.74%), Query Frame = 3
Query: 444 MVVGCQPLAGESMRWIKDTVAGLGNPHDAAAKNRVSKMEKYVLQGGDVNRPNKLGDTPLHEACAYIRDNGDSSKGKRRKA--VTKDRRKVGKKLSHRHLGEGGGLEMLELLINAGSNINAQNIVGDAPLHKAALNGRARSADFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQYEGIVIYLMGLVNNPETSEGLKLWQGLDPSWEKILRSRAQAQVEDAEDRDRGEKPATVTTAAATGLSSVRLGVSTPSTTHNSLLSSESAMGLGLAQANRTPVGQEQFTTTGXXXXXXXXXXXXX--------------TVSVRGSDQERVVGATSGALLARIGXXXXXXXXXXXXXXXXXXXAGASSDGIGPDSTGGSRLATRRRRRDEDGENAVGQPAPRAFSTGAADVLNWQATKAKSAQQERLIDKAREALREEQHEAAMAMSS--TTLGDDDCSVDTTNTADTPTTIGSRGSRPRGQRVRNGGKVSPAAAXXXXXAVSPADLEAGAPSGFRRVRGAPSRNGTA--AAAEGPPR------------------------------DDARKAATGSPVMPTAPRTGANDGA--LEPPREAARRQSARRSSSSQAVRLKSPAPRVSRRSSAAGFAKADNVDGSSGGXXXXXXXXXXXXSRGSGDRDRRPEASGSAGDGRDAERSHRTSGGRSSRPSVEHEGHHGHCSSXXXXXXXXXXXXXXXXSSRRR-EGEGTR-DNGVSGXXXXXXXERRSPSSRREXXXXXXXXXHRQKEGNAAVAGRSSPGVSGGSXSKRGHRSSRGQEGXXXXXXXXXXXXXXXXXXXXXXQPRSSHDGVGVAVNGDTGGAASTSAAPAQTPPAPDASSGGAASGLREVPTIVAKAVRVSHGARTPRKGDSLSAHFMSHGTPSRSRDGRPTASSRSGEGEGGATSQRPSEGKEDRRAPSPSSAGPSQPSAGTAAREGKTRRTSGGAGSRPSAKARKQHRSGGEELRPPAWASNVAPNLKEAKSRKKVIASDIPVRRV-SPYNDKKQEAPGAGGPALVDTASPKQFFSSPPRSA----ASRPVAKTMDLRG-DKDSDSCCGSSFDPPAVKADVSSSSXXXXXXXXXXXXXXXGDRFEAIANSXXXXXXXXXXXXXXXXDLGSDGLPISEAANNSPLGSSPLKTPTLSVEDGDFPPLIDALMMGKGETAAANGDLPQRSKERTHRGEDKREERVSPSASKTDDRPSMMREIALAKSXXXXXXXXXXXXXXXRSSAGEASHQAASTFGGGAHSIAALSAVLT--------DAEVERAM--EDHADGAASSVFSSSKESVAADGYATAP-AMTPPSQPTXXXXXXXXXXTISAE-------------AAPRAEETAVVSAPSAPDGTGPITADSSAVAGAAAQAVRGKSSGVEPSAA--SWASAQARSSTPPSQALTKAAPAAAALPSKTTAGGVGAGRGRPSTLGRPGMAPAKVTMPIAGGRAAWNKFLAGTAPGES-----ASDDPGPSTXXXXXXXXXXXXQRADTGAXXEGGKGGGGEGPEESDSADEQAEILATRGPRGFKNAADSQEGPNKGPAGAFSGNAMWRLSAGAASAASRARSGVAANGHGGYSNPLAAMRAGGGGGSTAVASGSAADGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRGRGAKPGG--AGGIANPMLRGXXXXXXXNPLARGSTASGGV--------------------------LAPGPSVSVAATKSAMPSGG-----VTVSSSPSLAASTEDVVKAAAAAVVADGVASTSVGEKLPFAVGGALDADGPAEFRAIGSNGSWQKGGIPLPPRRSTRV---EPQ--VEADPGQAKVGGLVMALQNSCDPGAGPMLKDLQTNEDSSSTSSLNVLDRKGLVSLRRAKYSPRHPVPGMPD 5894
MVVGCQPLAGESMRW+K TV+GL NPHDAAAKNR++KMEKYV QGGDVN+PNKLGDTPLHEACAYIRDNGDSSKGKRRK V KDRRKVGKKL+ R +GEGG LEMLELL+ AGSNINAQNIVGDAPLHKAALNGRA SAD+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQY+GI IYLMGLVNNPETS+ LKLW+GLDPSWEK+LRSRAQA+VED + D G T AAA GLSSVRLGV+TPSTTHNSL+SSESAMG+G++ NRTP ++ F+T+G XXXXXXXX S +G + A + G AGA G S+ G+R+ D + + G+ +PR FS GAADVL WQATK KSA+Q RLI+KAREALRE ++EA +A S T+LGDD+ S+DT NTAD+PTT+GS SRP +R R +SPAA V D + S RRV + N A + AE P DD+R A SPVMPT PR D P RE+ RRQSAR + + V ++SP RVSRR S GF KAD+VDGSS XXXXXXXXXXXX RS G H S XXXXXXXX + RR E EG R +NG XXXXXXX XX XXX XXXXXXXXXXXXXXXXXXXXXX RS +G + G AST A P PAP + V + SH +R SH S +R+GR ++S E RR P+ SS P TA R+ RPS+ L PP WASNV + E SRK+V+ASD P RRV PYN K+ P AGG +ASP + S RSA ASRPV K +D +G D + ++ +S + + S F+ S ++ + + A + + SP ++ S E + PPLI AL+M K AA +GD ++ ++RE+R + S + I +KS ++ E+ +Q+ T GG +AALSAV T D + E A+ AD ++S + S E++ +D A P A S+ T S E A A A V P+ P G GP D GAA V G+ + VEPS A ++ + S+ P + A+ L R R S LGRPGM KVTMPIAGGRAAWNKFLA TA GES A+D G XXXXXXXX G G A LA +G RGF N A SQEGPNKGPAGAFSGN+MWRL+ G A+ RARSGVAANGHGGYSNPLAAMRA G G XXXXXX XXXXX R RG + GG AGG+ANPMLR LARG+ GGV L+PGP+ + S GG V +S PS +++ P EFRAIGSNGSW G +PPRR +P E DPGQ KVGGLV ALQ +L++ + S+S SSL+ L K LV LRRAKYSPR PG+ D
Sbjct: 1 MVVGCQPLAGESMRWLKHTVSGLANPHDAAAKNRLAKMEKYVQQGGDVNKPNKLGDTPLHEACAYIRDNGDSSKGKRRKGKGVGKDRRKVGKKLTRRQMGEGGPLEMLELLLRAGSNINAQNIVGDAPLHKAALNGRALSADYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQYKGIAIYLMGLVNNPETSQELKLWEGLDPSWEKMLRSRAQARVEDGTEEDVGRPRDMSTAAAAAGLSSVRLGVTTPSTTHNSLMSSESAMGIGVS--NRTPARRDVFSTSGNRDRGXXXXXXXXXXXXXXXXXPPRGQAASTKGXXXXXXXMSAQSAAQVQPGVHHQRTTTRNRGSGSASPAAGA-----GMSSSDGARV-------DGERDEPPGETSPRVFSNGAADVLAWQATKVKSAKQGRLIEKAREALRETEYEAELARSRSMTSLGDDEASIDTCNTADSPTTVGSHSSRPGERRQRRA--ISPAAKPAETLEVFDVDADGNPQS--RRVYANANANAAADLSDAESQPSREXXXXXXXXXXXXXXXXXXXXXXVADATADDSRGRAV-SPVMPTPPRAEGRDDVDGHAPRRESGRRQSARLAKG-KVVSVRSPVARVSRRPS--GFPKADDVDGSSRRXXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXRRSXXXXXXXRGPGDHGQSDNXXXXXXXXSATAAAARPRRFEEEGVRAENGEXXXXXXXXXXXXXXXXXXXXXPEVDXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSQREG--------SDGHAST-AVPTTQAPAPASXXXXXXXXXXXXXXXVTSVPKASHESR-------------SH---SGAREGRASSSXXXXXXXXXXXXXXXXE----RRTPAISS--PGGRLYATAPRQ------------RPSS----------PNLCPPTWASNVPSSTLEDPSRKRVVASDFPARRVVGPYNSSKR-GPPAGGRRTRSSASPTRSSSPGRRSALPPPASRPVEKEIDPQGEDAEREAAVSASSHASSFPTETVGDSVSLPEAATVAGEAKPAATFK----SAVPEAVSARKTWEAKPTAAANCVATAAAVEDGVVQESPARSSAASAES-EGPPLIGALLMEK--KAATDGDSTAARADKEEELREEREDRAPCTTSTKSNPRRSFTAIETSKSIVFSDSDSEVDNDSSTRASNESPNQSP-TSGGDVQPMAALSAVSTVFARQRSGDKKGETAVLGNKQADSSSSVSGAVSAEALDSDRKADGPVASVSRSEEAASGDRGGTATTASKEDRQGLPSYQDALAAGTAAAAAAAVPRPAGP-GAGPEAVDDR---GAAPAEVEGRGT-VEPSPAPQNYLRPLSSSTLPSTMAV---------LAGXXXXXXXXXXRPRSSALGRPGMPSVKVTMPIAGGRAAWNKFLATTAQGESEESAAAADGDGGRAEKEGXXXXXXXXXXXXXXXPKASNAVAAGSG--------NHAATLAAKGLRGFTNPAQSQEGPNKGPAGAFSGNSMWRLAGGTAAETGRARSGVAANGHGGYSNPLAAMRAAGSGXXXXXXX------XXXXXXXXGSNPLAGLRGAAXXXXXRVSNPLARSRGPRAGGSRAGGVANPMLRSGGGGDVGG-LARGTV--GGVPLFSSSVRTTGRTAPXXXXXRDDEGSLSPGPATMPPLSSSPTEMGGAPAIPVAMSWGPSPSSADTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERPPTEFRAIGSNGSWPTDGALVPPRRRAAARGAQPHSVTERDPGQEKVGGLVKALQQPDASRLRLLLQNTHNPDLSASGSSLSNLGEKRLVQLRRAKYSPRPAAPGLLD 1813
BLAST of mRNA_L-elsbetiae_contig658.15283.1 vs. uniprot
Match: D8LC53_ECTSI (Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC53_ECTSI) HSP 1 Score: 367 bits (941), Expect = 7.460e-99 Identity = 729/1882 (38.74%), Postives = 866/1882 (46.01%), Query Frame = 3
Query: 753 EMLELLINAGSNINAQNIVGDAPLHKAALNGRARSADFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQYEGIVIYLMGLVNNPETSEGLKLWQGLDPSWEKILRSRAQAQVEDAEDRDRGEKPATVTTAAATGLSSVRLGVSTPSTTHNSLLSSESAMGLGLAQANRTPVGQEQFTTTGXXXXXXXXXXXXX--------------TVSVRGSDQERVVGATSGALLARIGXXXXXXXXXXXXXXXXXXXAG---ASSDGIGPDST-GGSR--LATRRRRRDEDGENAVGQPAPRAFSTGAADVLNWQATKAKSAQQERLIDKAREALREEQHEAAMAMSS--TTLGDDDCSVDTTNTADTPTTIGSRGSRPRGQRVRNGGKVSPAAAXXXXXAVSPADLEAGAPSGFRRVRGAPSRNGTAAAAEGPPR-----------------------------DDARKAATGSPVMPTAPRTGAND--GALEPPREAARRQSARRSSSSQAVRLKSPAPRVSRRSSAAGFAKADNVDGSS-----------------------------GGXXXXXXXXXXXXSRGSGDRDRRPEASGSAGDGRDAERSHRTSGGRSSRPSVEHEGHHGHCSSXXXXXXXXXXXXXXXXSSRRREGEGTRD-NGVSGXXXXXXXERRSPSSRREXXXXXXXXXHRQKEGNAAVAGRSSPGVSGGSXSKRGHRSSRGQEGXXXXXXXXXXXXXXXXXXXXXXQPRSSHDGVGVAVNGDTGGAASTSAAPAQTPPAPDASSGGAASGLREVPTIVAKAVRVSHGARTPRKGDSLSAHFMSHGTPSRSRDGRPTASSRSGEGEGGATSQRPSEGKEDRRAPSPSSAGPSQPSAGTAAREGKTRRTSGGAGSRPSAKARKQHRSGGEELRPPAWASNVAPNLKEAKSRKKVIASDIPVRRV-SPYNDKKQEAPGAGGPALVDTASPKQFFSSPPRSA---ASRPVAKTMDLRGDKD------SDSCCGSSFDPPAVKADVSSSSXXXXXXXXXXXXXXXGDRFEAIANSXXXXXXXXXXXXXXXXDLGSDGLPISEAANNSPLGSSPLKTPTLSVEDGDFPPLIDALMMGKGETAAANGDLPQRSKERTHRGEDKREERVSPSAS-KTDDRPSMM-----REIALAKSXXXXXXXXXXXXXXXRSSAGEASHQAASTFGGGAHSIAALSAVLTDAEVERAMED----------HADGAASSVFSSSKESVAADGYATAPAMTPPSQPTXXXXXXXXXXTISAEAAPRAEETAVVSAPSAPDGTGPITADSSAVAGAAAQAVRGKSSG-------VEPSAASWASAQARSSTPPSQA---LTKAAPAAAALPSKTT--AGG-----VGAGRGRPSTLGRPGMAPAKVTMPIAGGRAAWNKFLAGTAPGESASDDPGPSTXXXXXXXXXXXXQRADTGAXXEGGKGGGGEGPEESDSADEQAEILATRGPRGFKNAADSQEGPNKGPAGAFSGNAMWRLSAGAASAASRARSGVAANGHGGYSNPLAAMRAGGGGGSTAVASGSAADGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRGRGAKPGG--AGGIANPMLRGXXXXXXXNPLARGSTASGGVLAPGPSVSVAATKSAMP--------SGGVTV--SSSPSLAASTEDVVKAAAAAVVADGVASTSVGEKLPFAVGGALDADG-------------------------PAEFRAIGSNGSWQKGGIPLPPRR---STRVEPQ--VEADPGQAKVGGLVMALQNSCDPGAGPMLKDLQTNEDSSSTSSLNVLDRKGLVSLRRAKYSPRHPVPGMPD 5894
+MLELL+ AGSNINAQNIVGDAPLHKAALNGRA SAD+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQYEGIV+YLMGLVNNPETS+GLKLW+GLDPSWEK+LRSRAQA+VED + D G+ T AAA GLSSVRLGV+TPSTT NSL SSESAMGLG++ NRTP ++ F+T+G XXXXXXX T S +GS +ER + + A + G AG +SSDG D T GSR ATRRRRR +G+ G+ +PR FS GAADVL WQATK KSA+Q RLI+KAREALRE +HEA MA S T+LGDD+ S+DT NTAD+PTT+GSR SR RG+R R +SPAA VS DL+A RRV S + AE P DDAR A SPVMPT PR D PPRE+ RRQSAR + Q V ++SP RVSRR S GF+KAD+VDG XXXXXXXXX SRG GD + P G GG S XXXXXXXXXX D GV XXXXXXX XXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX RS +G + G A+T AAP GT TS R EG+E RR P+ SS G R A A +Q +S +L PP WASNV + E SRK+V+ASD P RRV SPYN +K+E ASRPV K +D +G+ + S SSF D S A++ ++G+ + A + + +SP ++ E + PPLIDAL+M K + A +GD E+ ++RE+R + +AS K++ R S + I + S XXXXXXXXXXXXX S E+ T GG +AALSAV T +R+ + AD + SS S+ E + +D A PA + E A +E + S D G + + AGAAA A + +G V AA+ A + R + PS A + P++ LPS AGG R R S LGRPGM AK GES XXXXXXXXXXXX X G G G + ++ A LA +GPRGF N A SQEGPNKGPAGAFSGN+MWRL+ G A+ A HGGYSNPLAAMRA G G G XX RGRG + GG AGG+ANPMLR LARG GGV P S SV T P G ++ ++ P L++S ++ +A A S S + P EFRAIGSNGSW G +PPRR S +P E DPGQ KVGGLV ALQ G +L + + S+S SSL+ L KGLV LRRAKYSPR PG+ D
Sbjct: 24 QMLELLLRAGSNINAQNIVGDAPLHKAALNGRALSADYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHQYEGIVVYLMGLVNNPETSQGLKLWEGLDPSWEKMLRSRAQARVEDGTEEDVGKPQEMSTAAAAAGLSSVRLGVTTPSTTRNSLRSSESAMGLGVS--NRTPARRDVFSTSGSRDRGGXXXXXXXXTRERKMMMPPRGETASTKGSTKERKIMSAPSAAQVQPGVHHQRTTARNRGSDSAAPAAGTAMSSSDGARVDGTRSGSRPSSATRRRRRSREGDAPPGETSPRVFSNGAADVLAWQATKVKSAKQGRLIEKAREALRETEHEAEMARSRSMTSLGDDEGSIDTCNTADSPTTVGSRSSR-RGER-RQRRAISPAAKPAETLEVS--DLDADGNPQSRRVNANASAAADLSDAESQPSRGSRRVKPVATNGTGGXXXXXXXXXXXXADDARGRAV-SPVMPTPPRAEGRDDVNGHAPPRESGRRQSARLAKG-QVVSVRSPVARVSRRPS--GFSKADDVDGRGRRSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCSSRGPGDHGQSPNKHG---------------GGESRSXXXXXXXXXXXXXEGVRAENXXXXXXXXXXXXXXXXXXXXXDATGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------XXXXXXXXXXXXXXXXXXXXXXXXRSQREG--------SDGHATT-AAPTTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEGT---------------------GTSSRTKEGRE-RRTPAASSPG-----------------------GRLYATAPRQRQSS-PDLCPPTWASNVPSSTLEDASRKRVVASDFPARRVVSPYNSRKREPXXXXXXXXXXXXXXXXXXXXXXXXXXXPASRPVEKEIDPQGEGAEREVVVNGSSHASSFPTETAGDDESLPEAATAAAEAKPAGTFNSSAVPGAASARSTWEAKPT--------AAANGVATAAAVGDGVVQASPARSSAAGAES-EGPPLIDALLMEKKK--ATDGDSTAARAEKEEGLREEREDRAACTASTKSNPRRSFTAIETSKSIVFSDSDSXXXXXXXXXXXXXNGSPNESP-----TSGGDVRPMAALSAVSTVFARQRSDDKKGETVVLGNKQADSSVSSAVSA--EVLDSDSKADDPAAS--------------VSRSEEEEAGSGDEGGTATTASKEDRQGLPSYQDALAAGAAAAAAVHRPAGPDMGPEAVYDGAAAPAEGEGRGTVEPSPAPQNYLRPLPSST-LPSTMAVLAGGSXXXXXXXXRPRSSALGRPGMPSAK---------------------GESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--GASGSKAGNAVAAASGNHAATLAAKGPRGFTNPAQSQEGPNKGPAGAFSGNSMWRLAGGTAAGAXXXXXXXXXXXHGGYSNPLAAMRAAGSGXXXXXXXXXXXAGXXVANPLAGLRGAASMXXAGVSNPLA------RGRGVRAGGSIAGGMANPMLRSGGGDMGG--LARGI--GGGV--PSFSSSVGTTGRTAPXXXXXRDDEGSLSPGPATMPPLSSSPTEMGRAPAIPAAMSWGPSPSSADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERPPTEFRAIGSNGSWPTDGALVPPRRRAASRGAQPHSMTERDPGQEKVGGLVKALQQPDASGLRLLLHNRHNPDLSASGSSLSNLGEKGLVKLRRAKYSPRPAAPGLLD 1726 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig658.15283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig658.15283.1 >prot_L-elsbetiae_contig658.15283.1 ID=prot_L-elsbetiae_contig658.15283.1|Name=mRNA_L-elsbetiae_contig658.15283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1825bp MMVVGCQPLAGESMRWIKDTVAGLGNPHDAAAKNRVSKMEKYVLQGGDVNback to top mRNA from alignment at L-elsbetiae_contig658:8062..26538- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig658.15283.1 ID=mRNA_L-elsbetiae_contig658.15283.1|Name=mRNA_L-elsbetiae_contig658.15283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=18477bp|location=Sequence derived from alignment at L-elsbetiae_contig658:8062..26538- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig658:8062..26538- >mRNA_L-elsbetiae_contig658.15283.1 ID=mRNA_L-elsbetiae_contig658.15283.1|Name=mRNA_L-elsbetiae_contig658.15283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=10950bp|location=Sequence derived from alignment at L-elsbetiae_contig658:8062..26538- (Laminarionema elsbetiae ELsaHSoW15)back to top |