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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Rab-GTPase-TBC domain |
| Ec32 ortholog | Ec-25_002120.1 |
| Exons | 2 |
| Model size | 560 |
| Cds size | 558 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816726.0373714-CDS-L-elsbetiae_contig6576:2550..2931 | 1622816726.0373714-CDS-L-elsbetiae_contig6576:2550..2931 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6576 2551..2931 - |
| 1691683768.0033638-CDS-L-elsbetiae_contig6576:2550..2931 | 1691683768.0033638-CDS-L-elsbetiae_contig6576:2550..2931 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6576 2551..2931 - |
| 1622816726.0490162-CDS-L-elsbetiae_contig6576:4374..4551 | 1622816726.0490162-CDS-L-elsbetiae_contig6576:4374..4551 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6576 4375..4551 - |
| 1691683768.0144823-CDS-L-elsbetiae_contig6576:4374..4551 | 1691683768.0144823-CDS-L-elsbetiae_contig6576:4374..4551 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6576 4375..4551 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6576.15279.1 >prot_L-elsbetiae_contig6576.15279.1 ID=prot_L-elsbetiae_contig6576.15279.1|Name=mRNA_L-elsbetiae_contig6576.15279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=186bp
GGVAEEVEAHAGLAPQGVGSAAAGCTAARTGSELREASSQSPVAIARPGD
PSGGVDPEVTQGNACAEKSDRIFLKRLPPPRSGKPENIMVSSLEETGMAT
AELSPRTRGSSGSDIQEQSSCGETQQRHRQQQQRQQTSSQTRAKSPPSPR
LLAAAAAAAASPRPGVRSALSPPSSPKGGFFLGRDD back to topmRNA from alignment at L-elsbetiae_contig6576:2549..4551- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6576.15279.1 ID=mRNA_L-elsbetiae_contig6576.15279.1|Name=mRNA_L-elsbetiae_contig6576.15279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2003bp|location=Sequence derived from alignment at L-elsbetiae_contig6576:2549..4551- (Laminarionema elsbetiae ELsaHSoW15)
GGGGGGGTGGCGGAGGAGGTGGAGGCCCACGCTGGGCTGGCTCCCCAAGG
CGTCGGATCGGCGGCAGCGGGTTGCACCGCTGCTCGCACGGGCTCCGAGC
TCCGGGAAGCTTCGTCGCAGTCCCCGGTGGCGATAGCGCGGCCGGGAGAT
CCGTCTGGCGGGGTTGATCCGGAAGTGGTGAGTGTGCGGGGGTCATCAAC
CACACCACTATTTTGTAGGAGGGACGGCCGACAGGCATCATGGTCGCGGG
TGACCCGCGTCCGTTATCTGTTACCCGCGCGCGTTACGGGTAGTGTGGGC
GTGGTGTTGGCTTTGTTTGGTGCCGCTGGTTTTGTGGCAGGCGTTGTTTG
TGGTGTGGCGGGGCATTCGTGTATTTGTCCGGCCCCGCTTTTTAGTTTTG
GTTTCCTTTATCCAGTTTTTTGCCGATTTCTCGACAACTAGAGTTTTTCT
AGAAAAAGAAAAAAAGACGTCCCAGAGGCCCCGAACTCAGGGTTCGTTCG
CCGATGTTTTTTTTTTAATCGGCTGGTTAGTTATCGTAAAAAATATTACG
TACAGCTTTTTCAGGTTTTTCCTCGACAACAACGTAGTAACAGGCGCGAG
AAAAAAATCTTTCCGTCAGGTGATGCGCCTTGAGACGAAGCGTTTGCCGG
TATTTTAAGATTTTGGAACAACCACCCCTGTGTGGAGAAAAGCTGTTGTT
GTTTCTTCACATTAGCTCGTATAATCGAGATTGCCAATTCAAGAAAATCT
AGCAACTCACGGCCCGTGGTCACAAAAGTGCTAGAGCCGTCAGAAGATCC
GAAAATGACATACGCAGATCCACCGGGCGAGGGTACACAAGGCCGAGGAG
GTACACCTATGAATATGCCGGTAAAAAAACAAACGAAGTATATCCTACTG
AACCACGCATCCACGGATCTCCATTCGACTACAGGAACTACGTTTCCCCC
CCGTCCACTCTATTAACCAATGGACGGTTGGTTCTCGGCTGTGGAGAAAA
TTGTACCCGAGTGGCGGTGATTTTTTTGGAAAAAAAGGAGTGTACGGACC
ATACGATATGTCAGCGATCTAGCGTCCGGCTCTGGTGAAGAAGTCGTACC
AGGGGAGACTCCTGTGGTAGACACTCCAACCCTTGCCCCATCGCCCCGAG
ACTAAATACATACTTGGTACATATGTACAGCAGTGGTTCCAAATCCGTGT
AGTTCCCTGGCGGCTTGTATTGTGGGTCCGCTTTGCTTAGAGAAGTACAT
GTGTTACTTCACCTGACGTTTTAATTAGTTCGCAACAAAGAATGTCAGCG
GTCTACGTCCAGCCTGCGAAAAAGTCGTTCCAATGGAGACTGCTGTTGTA
CACACATTAGCATACTAAATAACCCTCCCTCGCCATCAAAGCTGTACATG
ACTCACAAATCCGTAATCCGTATATGTAAGTAGGTAGGTACGATAGATAG
TTCGTTGGTGACGTTAATTGACAACGTTATATGGCATTTTGTTTTGCTCT
GTGCCTTGCATGGTGACGACGTTCAAGACAGCGAGCGCACCCTCCCTTCT
CTCCTCCCCCTCCTTCTGCCTCTCCCCCCCCTCTTCTTATCTTCTCCCCC
CTCTTTCCCCTCTCTCTCAGACGCAGGGTAACGCTTGCGCCGAAAAGAGC
GACCGCATTTTCCTGAAGCGCCTGCCGCCCCCACGATCCGGCAAGCCCGA
GAACATCATGGTGTCCTCCCTCGAGGAGACGGGGATGGCGACGGCGGAGC
TCAGCCCCCGGACCCGTGGCAGCAGCGGCAGCGACATCCAGGAACAATCC
AGCTGTGGAGAAACCCAGCAGCGGCATCGGCAGCAGCAGCAGCGGCAGCA
AACCAGCAGTCAGACGAGGGCCAAGTCTCCGCCAAGCCCGCGGCTCTTAG
CGGCGGCGGCGGCGGCAGCGGCGTCTCCGAGGCCGGGCGTGCGGTCGGCC
TTGTCGCCGCCCTCTTCGCCCAAGGGAGGTTTTTTCTTGGGGCGCGATGA
CGA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6576:2549..4551- >mRNA_L-elsbetiae_contig6576.15279.1 ID=mRNA_L-elsbetiae_contig6576.15279.1|Name=mRNA_L-elsbetiae_contig6576.15279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1116bp|location=Sequence derived from alignment at L-elsbetiae_contig6576:2549..4551- (Laminarionema elsbetiae ELsaHSoW15)
GGGGGGGTGGCGGAGGAGGTGGAGGCCCACGCTGGGCTGGCTCCCCAAGG
CGTCGGATCGGCGGCAGCGGGTTGCACCGCTGCTCGCACGGGCTCCGAGC
TCCGGGAAGCTTCGTCGCAGTCCCCGGTGGCGATAGCGCGGCCGGGAGAT
CCGTCTGGCGGGGTTGATCCGGAAGTGGGGGGGGTGGCGGAGGAGGTGGA
GGCCCACGCTGGGCTGGCTCCCCAAGGCGTCGGATCGGCGGCAGCGGGTT
GCACCGCTGCTCGCACGGGCTCCGAGCTCCGGGAAGCTTCGTCGCAGTCC
CCGGTGGCGATAGCGCGGCCGGGAGATCCGTCTGGCGGGGTTGATCCGGA
AGTGACGCAGGGTAACGCTTGCGCCGAAAAGAGCGACCGCATTTTCCTGA
AGCGCCTGCCGCCCCCACGATCCGGCAAGCCCGAGAACATCATGGTGTCC
TCCCTCGAGGAGACGGGGATGGCGACGGCGGAGCTCAGCCCCCGGACCCG
TGGCAGCAGCGGCAGCGACATCCAGGAACAATCCAGCTGTGGAGAAACCC
AGCAGCGGCATCGGCAGCAGCAGCAGCGGCAGCAAACCAGCAGTCAGACG
AGGGCCAAGTCTCCGCCAAGCCCGCGGCTCTTAGCGGCGGCGGCGGCGGC
AGCGGCGTCTCCGAGGCCGGGCGTGCGGTCGGCCTTGTCGCCGCCCTCTT
CGCCCAAGGGAGGTTTTTTCTTGGGGCGCGATGACACGCAGGGTAACGCT
TGCGCCGAAAAGAGCGACCGCATTTTCCTGAAGCGCCTGCCGCCCCCACG
ATCCGGCAAGCCCGAGAACATCATGGTGTCCTCCCTCGAGGAGACGGGGA
TGGCGACGGCGGAGCTCAGCCCCCGGACCCGTGGCAGCAGCGGCAGCGAC
ATCCAGGAACAATCCAGCTGTGGAGAAACCCAGCAGCGGCATCGGCAGCA
GCAGCAGCGGCAGCAAACCAGCAGTCAGACGAGGGCCAAGTCTCCGCCAA
GCCCGCGGCTCTTAGCGGCGGCGGCGGCGGCAGCGGCGTCTCCGAGGCCG
GGCGTGCGGTCGGCCTTGTCGCCGCCCTCTTCGCCCAAGGGAGGTTTTTT
CTTGGGGCGCGATGAC back to top
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