mRNA_L-elsbetiae_contig654.15242.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI) HSP 1 Score: 348 bits (892), Expect = 1.930e-112 Identity = 174/286 (60.84%), Postives = 225/286 (78.67%), Query Frame = 3 Query: 177 MSFTLSCQSDFLAVGLVEGERFATPIRVFATLIAVSVTSSW-NFTKIKRLSLFFYHWLSGLVLGLGYLVEDMMVSVCWASSNLEGFIKMLKYIELAASNMLAITNLAICINLALIVSSHRTMTRVSSVSTPPLLLLCLTISMALPVVVVPFWDSIALLGTGFYVINPDQSQHEFIVVSLFLVEFVVGVCMFFIIAWLLRYWMKEVKQCWELHRHIRYYFCLTALGSAVNLGLGICGTAFVAGGQKRPILMVASWVFRYIHIALDTIVLYGVLRERGIDERSDNNRT 1031 M LSC++ F A+GL EGE TPIRV +TL++VSV S+W ++TK+KRLSLFF HWLSGLV GL ++VEDMMV+VCW S+L GFIK +K+IE +SNM+AIT+LAIC+NLALIVSSHRT+TRV SVS+P LL L L IS+ + V VP W+++ ++GTGF+++N DQ ++ +VVS+F +EF+VG+CMF I+AWLL + MKEVK+CW + IRYYFCLT LG+AVN+G+GIC T FV G P L + SWV RYIH+ALDT VLYGVLRE+ +DER N R+ Sbjct: 1 MPTILSCETGFTAIGLQEGEDKITPIRVLSTLVSVSVVSAWCSWTKVKRLSLFFAHWLSGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDERGGNARS 286
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI) HSP 1 Score: 275 bits (704), Expect = 5.590e-85 Identity = 132/227 (58.15%), Postives = 178/227 (78.41%), Query Frame = 3 Query: 348 SGLVLGLGYLVEDMMVSVCWASSNLEGFIKMLKYIELAASNMLAITNLAICINLALIVSSHRTMTRVSSVSTPPLLLLCLTISMALPVVVVPFWDSIALLGTGFYVINPDQSQHEFIVVSLFLVEFVVGVCMFFIIAWLLRYWMKEVKQCWELHRHIRYYFCLTALGSAVNLGLGICGTAFVAGGQKRPILMVASWVFRYIHIALDTIVLYGVLRERGIDERSDNNR 1028 +G++ L +LVEDMMV+VCWA NLE IK +K++ELA+S+MLA+T+LAIC+NLALIVSSHRT+ RV SVS+P LL L L ISM + VP W+++ ++GT F+++N DQ +++ +VVS+F +EF+VG+CMF I+AWLL + +KEVK+CW +H IRYY CLT LG+ ++L +GIC T FV GG K+ L + +WVFRYIHIALDT VLYGVLRE+ +DER N R Sbjct: 10 TGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDERVGNAR 236
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE) HSP 1 Score: 255 bits (652), Expect = 2.980e-77 Identity = 126/250 (50.40%), Postives = 178/250 (71.20%), Query Frame = 3 Query: 348 SGLVLGLGYLVEDMMVSVCWASSNLEGFIKMLKYIELAASNMLAITNLAICINLALIVSSHRTMTRVSSVSTPPLLLLCLTISMALPVVVVPFWDSIALLGTGFYVINPDQSQHEFIVVSLFLVEFVVGVCMFFIIAWLLRYWMKEVKQCWELHRHIRYYFCLTALGSAVNLGLGICGTAFVAGGQKRPILMVASWVFRYIHIALDTIVLYGVLRERGIDERSDNNRTVSEA-SENDTPKVTGGESTFKP 1094 SG ++ L + ED+MVS C+A++NL G IK + ++ + +SNMLA TNL ICINLALIVSSHRTMTRV +VS+P +L + L +S +L VP W++ +LGT F+ N D +++FI++S++++EF+VG+CM I+ WL + M E+K+CW H IRYYFCLT G+AVNLGLGICG A+V G +K P+ + SW+FRYIHI+ DT+VLYG LRE IDER++ +R+ + N + GE + KP Sbjct: 9 SGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDERAEADRSSQDGHGHNASGLARNGELSSKP 258
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI) HSP 1 Score: 253 bits (647), Expect = 1.230e-76 Identity = 135/257 (52.53%), Postives = 175/257 (68.09%), Query Frame = 3 Query: 147 SSAISVAVETMSFTLSCQSDFLAVGLVEGERFATPIRVFATLIAVSVTSSWNFTK--IKRLSLFFYHWLSGLVLGLGYLVEDMMVSVCWASSNLEGFIKMLKYIELAASNMLAITNLAICINLALIVSSHRTMTRVSSVSTPPLLLLCLTISMALPVVVVPFWDSIALLGTGFYVINPDQSQHEFIVVSLFLVEFVVGVCMFFIIAWLLRYWMKEVKQCWELHRHIRYYFCLTALGSAVNLGLGICGTAFVAGGQKR 911 S A A+ F+L C + F VGL EGE TPIRV +TLI +SV S+W + IK+L LFF HWLSGL+ L ++ E MVSVCWA +L IK LK+ ELAASNMLAITNLAIC+NLALIV SHRT++RV S STP L+L+ L +S+ + + VPFW + + GT F+V +Q+ H++IVV+ F VEF VG+CM I+ WL+ + E+KQ W++H IRYYF LT + + VNL LGICGT +V G K Sbjct: 16 SQAAQAALYAEMFSLKCNAGFFVVGLQEGEAVCTPIRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDMKE 272
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI) HSP 1 Score: 243 bits (621), Expect = 1.860e-72 Identity = 127/240 (52.92%), Postives = 166/240 (69.17%), Query Frame = 3 Query: 390 MVSVCWASSNLEGFIKMLKYIELAASNMLAITNLAICINLALIVSSHRTMTRVSSVSTPPLLLLCLTISMALPVVVVPFWDSIALLGTGFYVINPDQSQHEFIVVSLFLVEFVVGVCMFFIIAWLLRYWMKEVKQCWELHRHIRYYFCLTALGSAVNLGLGICGTAFVAGGQKRPILMVASWVFRYIHIALDTIVLYGVL---RERGIDERSDNNRTVSEASENDTPKVTGGESTFKPPL 1100 MV VCWA SN+ GF+K LK++EL ASNMLAITNLAIC NLAL++ SHRT+ RV S S+P L+ L L +S+A+ V PFW + + GTGF V N DQ +++ VS F +EF+VG+CMF I+AWLL + + EVK+CW++H IRYYF LT +G+ VNL LG+CGT +V GG+++ +L+V +W FR+IHIALDT VLYGVL G DE D R S A+ G S +P L Sbjct: 1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVLGVPAATGHDEGPDAQRRCSAAAAAPGSNPRGCSSCSRPGL 240
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE) HSP 1 Score: 240 bits (612), Expect = 2.400e-71 Identity = 121/233 (51.93%), Postives = 164/233 (70.39%), Query Frame = 3 Query: 375 LVEDMMVSVCWASSNLEGFIKMLKYIELAASNMLAITNLAICINLALIVSSHRTMTRVSSVSTPPLLLLCLTISMALPVVVVPFWDSIALLGTGFYVINPDQSQHEFIVVSLFLVEFVVGVCMFFIIAWLLRYWMKEVKQCWELHRHIRYYFCLTALGSAVNLGLGICGTAFVAGGQKRPILMVASWVFRYIHIALDTIVLYGVLRERGIDERSDNNRTVSEASENDTPKVTG 1073 + + M+SVCW LEGFIK LKY+E +SNMLAITNLAICINLAL+V+SHRT++RV+SVSTP L+LL L IS+ VPFW + GT F+V N D+++ ++I+VS+ ++EFVVG+CMF I++WL+ + M+ +K+CW+LH IRYYF LT +G+AVNL LGI G ++V L+ +W FRY H+ALDTIVLYGVL R +DE + + S S P +G Sbjct: 3 MTQGTMISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDEGGGSAASTSGTSSGRLPASSG 235
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI) HSP 1 Score: 228 bits (580), Expect = 3.320e-67 Identity = 113/210 (53.81%), Postives = 151/210 (71.90%), Query Frame = 3 Query: 390 MVSVCWASSNLEGFIKMLKYIELAASNMLAITNLAICINLALIVSSHRTMTRVSSVSTPPLLLLCLTISMALPVVVVPFWDSIALLGTGFYVINPDQSQHEFIVVSLFLVEFVVGVCMFFIIAWLLRYWMKEVKQCWELHRHIRYYFCLTALGSAVNLGLGICGTAFVAGGQKRPILMVASWVFRYIHIALDTIVLYGVLRERGIDERSD 1019 M+SVCWA NL FIK LK++EL ASNMLAITNLAIC+NL+LIV S R + V S+ST L+LL L +S L + VPFW L GTGF+ + ++ HEF+++S F+VEF+VG+CMF I++WLL + M E+K+CW +H +RYYF LT LG+ NL LG+CGT +V P+LM+ SW FR + IALDTIVL+ VL + +DER++ Sbjct: 1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAE 210
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI) HSP 1 Score: 194 bits (492), Expect = 3.440e-55 Identity = 95/168 (56.55%), Postives = 129/168 (76.79%), Query Frame = 3 Query: 390 MVSVCWASSNLEGFIKMLKYIELAASNMLAITNLAICINLALIVSSHRTMTRVSSVSTPPLLLLCLTISMALPVVVVPFWDSIALLGTGFYVINPDQSQHEFIVVSLFLVEFVVGVCMFFIIAWLLRYWMKEVKQCWELHRHIRYYFCLTALGSAVNLGLGICGTAFV 893 M+SVCW LEGFIK LKY+E +SNMLAITNLAICINLAL+V+SHRT++RV SVSTP L+LL L IS+ VPFW + GT F+V N D+++ ++I+VS+ ++EFVVG+CMF I++WL+ + M+ +K+CW++H IRYYF LT + +AVNL LGI G ++V Sbjct: 1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYV 168
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Match: D8LNN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN7_ECTSI) HSP 1 Score: 187 bits (476), Expect = 1.440e-52 Identity = 81/149 (54.36%), Postives = 118/149 (79.19%), Query Frame = 3 Query: 585 LTISMALPVVVVPFWDSIALLGTGFYVINPDQSQHEFIVVSLFLVEFVVGVCMFFIIAWLLRYWMKEVKQCWELHRHIRYYFCLTALGSAVNLGLGICGTAFVAGGQKRPILMVASWVFRYIHIALDTIVLYGVLRERGIDERSDNNRT 1031 L +S +L V VP W++ +LGT F+ NPD ++++F+++S+++ EF+VG+CM I++WL + MKE+K+CW++H IRYYFCLT LG+AVNLGLGICG AFV G +K+P+L + SW+FRYI I+ DT+VLYGVLRE IDER++ +R+ Sbjct: 2 LLVSASLAVATVPLWETTVVLGTAFWFTNPDPAKYDFVIMSIYIFEFIVGICMLVIVSWLAMFRMKEMKECWKIHPRIRYYFCLTLLGTAVNLGLGICGAAFVKGDRKQPLLQIWSWLFRYIQISFDTLVLYGVLREGSIDERAEEDRS 150
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE) HSP 1 Score: 185 bits (469), Expect = 8.990e-52 Identity = 94/176 (53.41%), Postives = 129/176 (73.30%), Query Frame = 3 Query: 390 MVSVCWASSNLEGFIKMLKYIELAASNMLAITNLAICINLALIVSSHRTMTRVSSVSTPPLLLLCLTISMALPVVVVPFWDSIALLGTGFYVINPDQSQHEFIVVSLFLVEFVVGVCMFFIIAWLLRYWMKEVKQCWELHRHIRYYFCLTALGSAVNLGLGICGTAFVAG-GQKRP 914 M+SVCWA NL IK LK++ELA++NMLA+TNLAIC+NLAL+V SHRT++RVSS+S+P ++ L L +++ VP W +I L GT F + D+ ++ VVS FL EF+VG+CM I+AWLL + MKE+K+CW++H IRYYF LT + + VNL LGI GT ++ G GQ+RP Sbjct: 1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIVGEGQRRP 176 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig654.15242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig654.15242.1 >prot_L-elsbetiae_contig654.15242.1 ID=prot_L-elsbetiae_contig654.15242.1|Name=mRNA_L-elsbetiae_contig654.15242.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=310bp MSFTLSCQSDFLAVGLVEGERFATPIRVFATLIAVSVTSSWNFTKIKRLSback to top mRNA from alignment at L-elsbetiae_contig654:9194..19855+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig654.15242.1 ID=mRNA_L-elsbetiae_contig654.15242.1|Name=mRNA_L-elsbetiae_contig654.15242.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10662bp|location=Sequence derived from alignment at L-elsbetiae_contig654:9194..19855+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig654:9194..19855+ >mRNA_L-elsbetiae_contig654.15242.1 ID=mRNA_L-elsbetiae_contig654.15242.1|Name=mRNA_L-elsbetiae_contig654.15242.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1860bp|location=Sequence derived from alignment at L-elsbetiae_contig654:9194..19855+ (Laminarionema elsbetiae ELsaHSoW15)back to top |