mRNA_L-elsbetiae_contig6537.15237.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: D8LRK7_ECTSI (YqgFc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK7_ECTSI) HSP 1 Score: 354 bits (908), Expect = 1.180e-114 Identity = 191/254 (75.20%), Postives = 210/254 (82.68%), Query Frame = 2 Query: 308 IHPSVAWLYPAGASPATERTGSGSNGRERKRRRPSRRTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEIDSLAASLVLEHFFEGGGTDSAERVEPSTSMVPLEVLEAAGRKGEAVEDEEREKEREEDAYGEGSRRRFQEMREESARSMAAGEDVVPRKSSRXXXXR 1069 +HPSV+WLYP S T + + +E K R PSRRTLCVDYGTRRVGLAIGVGISPR VPGVTN GSDLEVARQVLVRARGEGIRDIVVGLPLERNGTET MCE+VRGFASVLADVGA SRP++GVFLWDERFSSAQA AMLDPYGGGMSSKVEIDSLAASL+L+HFFE GGT++AE+V+PST +V EV AAGR GE E++E EDAYGEGSRRRFQEMREESARS AAGED R++ R R Sbjct: 44 VHPSVSWLYPPKPSSTTAVKTTDTRSQETKTR-PSRRTLCVDYGTRRVGLAIGVGISPRAVPGVTNVGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETEMCEIVRGFASVLADVGAASRPTAGVFLWDERFSSAQAAAMLDPYGGGMSSKVEIDSLAASLILKHFFEEGGTNNAEKVKPSTGVVTAEVWRAAGRDGEEGEEDESXXXXXEDAYGEGSRRRFQEMREESARSAAAGEDSARRRAWRKRRRR 296
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A7S2ZDD4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDD4_9RHOD) HSP 1 Score: 96.3 bits (238), Expect = 6.630e-19 Identity = 68/155 (43.87%), Postives = 86/155 (55.48%), Query Frame = 2 Query: 413 RRTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSK-----VE--IDSLAASLVLEHFFEGGGTDSAERVEP 856 ++TL VDYG RRVGLA+ VGI+PR + + NRG+ EVAR++ AR E + +VVGLPL G E R F L + P ++LWDERFS+ A L MSSK VE +DS AA +LE FFE G D AE + P Sbjct: 22 KKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLRI----ALPEPPIYLWDERFSTQTARNRL------MSSKTYRNQVENFVDSEAAVAILEDFFENSG-DDAELLYP 165
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A7S4D691_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D691_HETAK) HSP 1 Score: 97.4 bits (241), Expect = 8.570e-19 Identity = 61/150 (40.67%), Postives = 86/150 (57.33%), Query Frame = 2 Query: 410 SRRTLCVDYGTRRVGLAIGVG-ISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEIDSLAASLVLEHFFEGGGTDSAERVEP 856 S R L VDYGT+RVG+AI G I+PR V + N G D +V R++ AR E I VVG+PL+R+G ET + R F+ LAD + P V++W+E FSS A ++L G +D++AA ++LE +F G AE + P Sbjct: 72 SERVLGVDYGTKRVGIAISAGGIAPRPVKIIQNSGDDSQVIREIKFMARAEQISSFVVGVPLQRDGAETNQSIINRNFSQTLAD---EVSPRVPVYVWNEAFSSVAAESLLLHKSRGEIDAC-LDAVAACMILEDYFSEDGW-GAELIPP 216
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A7S3X7E5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X7E5_EMIHU) HSP 1 Score: 95.5 bits (236), Expect = 1.140e-18 Identity = 63/148 (42.57%), Postives = 87/148 (58.78%), Query Frame = 2 Query: 416 RTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLE-VARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEIDSLAASLVLEHFFEGGGTDSAERVEP 856 RTL VD+G RR GLA+ GI+P + + ++ ++L VA QV+ AR EG +V+G+P +G E R F +LA A RP V+LWDERFSSA+A +M G G + ID +AA+++LE FFEG SAE + P Sbjct: 62 RTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAAP-RP---VYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFFEGDFA-SAELIAP 203
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: R1ED05_EMIHU (YqgFc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ED05_EMIHU) HSP 1 Score: 94.0 bits (232), Expect = 4.560e-18 Identity = 59/137 (43.07%), Postives = 82/137 (59.85%), Query Frame = 2 Query: 416 RTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLE-VARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEIDSLAASLVLEHFFEG 823 RTL VD+G RR GLA+ GI+P + + ++ ++L VA QV+ AR EG +V+G+P +G E R F +LA A RP V+LWDERFSSA+A +M G G + ID +AA+++LE FFEG Sbjct: 26 RTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAAP-RP---VYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFFEG 157
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A0M9UCW6_9CHLR (Putative pre-16S rRNA nuclease n=2 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0M9UCW6_9CHLR) HSP 1 Score: 89.4 bits (220), Expect = 2.570e-17 Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 428 VDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVE-IDSLAASLVLEHFFEGGGTDSAERVEPST 862 +DYG RRVG+A GVG++PR V + + + +AR V + AR E I+VGLPL +G+E R FA VLA ++ V+LWDER++S A + G ++ E +D++AA+++LEH+FE G AERV P + Sbjct: 1 MDYGKRRVGVAAGVGMAPRPVAVLPHGSLESLIARLVEL-ARAEQAAKIIVGLPLNTDGSEGEQAAQCRAFAEVLA-----AQTDIPVYLWDERYTSKDAQQQMIAAGTTQKARREKLDAVAAAVMLEHYFEHQGV-GAERVIPKS 139
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A7S2WGV2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGV2_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 3.800e-17 Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 2 Query: 410 SRRTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKV--EIDSLAASLVLEHFFEGGGTDSAERVEP 856 +R L VDYGTRR+GLA+ G SPR V + + G+ E+ ++L A+GE +VVG PL ++G E +L R F VLA A+ GV++ DER+SSA+A A L ++ +D+ +A +L FF S ER+ P Sbjct: 56 NRLALGVDYGTRRIGLAMSAGFSPRPVLTIKHTGNTTEMVHKILNIAKGEDAELLVVGNPLNQDGEENFQSDLTRNFTQVLASEVARRSLKLGVYMKDERYSSAEAEANLQFVSKKSKGRMLAVLDAESACSILRAFFNEPVDSSVERITP 206
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A8J2T1I1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1I1_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.280e-16 Identity = 59/147 (40.14%), Postives = 82/147 (55.78%), Query Frame = 2 Query: 419 TLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLE-VARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKVEIDSLAASLVLEHFFEGGGTDSAERVEP 856 TL VDYG RRVG+ +GVG + R + V D++ V ++L AR E I IVVGLPLE++G E C R FA LA + P++ + LWDERFSS +A A+L G +D++AA ++L+ FF +A P Sbjct: 78 TLGVDYGLRRVGVCVGVGFASRPLE-VIEHDEDIDAVVARLLQIARRERIASIVVGLPLEKDGAEGLQCAATRRFADALA----AAAPATPLVLWDERFSSREAEALLAHRPGAA-----LDAVAACVILDDFFASADDGAAAPPAP 214
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A7S3E813_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E813_9RHOD) HSP 1 Score: 81.3 bits (199), Expect = 2.980e-14 Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 413 RRTLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQA 727 ++TL VDYG RRVGLA+ VGI+PR + + NRG+ EVAR++ AR E + +VVGLPL G E R F L + P ++LWDERFS+ A Sbjct: 22 KKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLRI----ALPEPPIYLWDERFSTQTA 122
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Match: A0A838RI18_9CHLR (Putative pre-16S rRNA nuclease n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RI18_9CHLR) HSP 1 Score: 79.3 bits (194), Expect = 9.390e-14 Identity = 58/149 (38.93%), Postives = 79/149 (53.02%), Query Frame = 2 Query: 419 TLCVDYGTRRVGLAIGVGISPRTVPGVTNRGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETGMCELVRGFASVLADVGAQSRPSSGVFLWDERFSSAQAGAMLDPYGGGMSSKV---EIDSLAASLVLEHFFEGGGTDSAERVEP 856 TL +DYG+ RVG A+ VG R + V GS + ++L E + IVVGLPL +GTE +VRGFA+ LA + +FLW+E SS A A + G S K ++D++AA+L L+ F E G AERV P Sbjct: 4 TLAIDYGSARVGTAVSVGWMARPLD-VFPHGSIESLLARLLALCTQEQVTKIVVGLPLNADGTEGEQATVVRGFATELAQT-----TNLEIFLWNEYGSSQAAQAQM--IGASRSRKARREKLDAIAAALFLQEFVEQNGV-GAERVYP 143 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6537.15237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6537.15237.1 >prot_L-elsbetiae_contig6537.15237.1 ID=prot_L-elsbetiae_contig6537.15237.1|Name=mRNA_L-elsbetiae_contig6537.15237.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=348bp MKTRRRSTVTVCFYLFATLLTASCPEGNALGFSITLSTRTRPPTATATAVback to top mRNA from alignment at L-elsbetiae_contig6537:6125..8587- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6537.15237.1 ID=mRNA_L-elsbetiae_contig6537.15237.1|Name=mRNA_L-elsbetiae_contig6537.15237.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2463bp|location=Sequence derived from alignment at L-elsbetiae_contig6537:6125..8587- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6537:6125..8587- >mRNA_L-elsbetiae_contig6537.15237.1 ID=mRNA_L-elsbetiae_contig6537.15237.1|Name=mRNA_L-elsbetiae_contig6537.15237.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2088bp|location=Sequence derived from alignment at L-elsbetiae_contig6537:6125..8587- (Laminarionema elsbetiae ELsaHSoW15)back to top |