mRNA_L-elsbetiae_contig6528.15224.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Match: D7FZ69_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ69_ECTSI) HSP 1 Score: 167 bits (422), Expect = 1.600e-47 Identity = 96/183 (52.46%), Postives = 128/183 (69.95%), Query Frame = 1 Query: 10 DGAIWKGDLSTGEGEAVLSEAGEPALGLDYDRRSGYLYVAGSFAGTARVYDTKTANFELVANLTLVGSNATGLVNDVIVTDTAAYFTDSLLAQLYAVPLDKDSGSLADGNETTVETIPLLG--FPLLENTVNANGIEVTCDGRTLIVVNMGSGELFTVNPATGEAAAINLGGVLV--HGDGLV 546 DG IWKGDL TGEGE + +A PA GL +DRRSGYL+VAG+F+GT RVYD +F LVA+L G T ++NDV+VT AA++TDS +Y V LD+++G+L DG+ + ET+ +LG FP +E +N NGIEVT DG LIVVN S +++ V+P TG+A I+LGG ++ GDGLV Sbjct: 72 DGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDE---DFALVADLDF-GDVGTSIINDVVVTKGAAFYTDSFQPHIYKVNLDRETGALVDGS--SFETL-VLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLV 247
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Match: D8LPY1_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY1_ECTSI) HSP 1 Score: 163 bits (412), Expect = 2.870e-46 Identity = 97/182 (53.30%), Postives = 122/182 (67.03%), Query Frame = 1 Query: 10 DGAIWKGDLSTGEGEAVLSEAGEPALGLDYDRRSGYLYVAGSFAGTARVYDTKTANFELVANLTLVGSNATGLVNDVIVTDTAAYFTDSLLAQLYAVPLDKDSGSLADGNETTVETIPLL-GFPLLENTVNANGIEVTCDGRTLIVVNMGSGELFTVNPATGEAAAINLGGVLV--HGDGLV 546 +G IWKGDL TG+GE A PA+GLD+DRRS YL+VAG GTARVYD +F LVA+L L N++ VNDVI+T TAA+FTDS ++Y V LD+++G+L DG V T+ L P+LE N NGIE T DG L++VNM S +LF V+P TG A I+LGG L+ GDGLV Sbjct: 52 NGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSDYLFVAGGPVGTARVYDE---DFALVADLALSDGNSS-FVNDVIITKTAAFFTDSFQPKIYKVNLDRETGALVDG--LAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALVIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLV 227
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Match: S2ZZG1_9ACTN (Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 TaxID=1078086 RepID=S2ZZG1_9ACTN) HSP 1 Score: 142 bits (357), Expect = 5.720e-38 Identity = 88/184 (47.83%), Postives = 112/184 (60.87%), Query Frame = 1 Query: 1 NGADGAIWKGDLSTGEGEAVLSEAGEPALGLDYDRRSGYLYVAGSFAGTARVYDTKTANFELVANLTLVGSNATGLVNDVIVTDTAAYFTDSLLAQLYAVPLDKDSGSLADGNETTVETIPLLGFPLLENTVNANGIEVTCDGRTLIVVNMGSGELFTVNPATGEAAAINLGGV-LVHGDGLVR 549 N GA+++ DL+TG G + G P GL R G LYVAG AG AR+ DT T +L+A LV +A GLVNDV++T TAAYFTDS A LYA+P+ D GSL + TV +PL G P+ T+N NGI T DGR LIV + G L+ V+PA G A ++LGG L GDG++R Sbjct: 66 NRLTGAVYRIDLTTGTGSMLAKSVGAPCAGLKVGPR-GRLYVAGDRAGDARIIDTATG--DLLATYGLVPPSAAGLVNDVVITPTAAYFTDSARAALYALPIPPD-GSLPGQGQVTV--LPLTGLPITPGTINLNGIASTPDGRALIVAHSAEGTLYRVDPAAGTATLVDLGGGRLGVGDGMLR 243
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Match: A0A161V346_9MICO (Uncharacterized protein n=2 Tax=unclassified Agromyces TaxID=2639701 RepID=A0A161V346_9MICO) HSP 1 Score: 140 bits (354), Expect = 1.390e-37 Identity = 92/181 (50.83%), Postives = 121/181 (66.85%), Query Frame = 1 Query: 7 ADGAIWKGDLSTGEGEAVLSEAGEPALGLDYDRRSGYLYVAGSFAGTARVYDTKTANFELVANLTLVGSNATGLVNDVIVTDTAAYFTDSLLAQLYAVPLDKDSGSLADGNETTVETIPLLGFPLLENTVNANGIEVTCDGRTLIVVNMGSGELFTVNPATGEAAAINLGGV-LVHGDGLV 546 ADG I+ D+ +G G+ + G P++GLD D+R G L+VAG AG ARV DT+T EL+A+ L GS AT VNDVIVT AA+FTDS AQLY +PL +G+L + VE +PL G +L+ NANGIEVT DG+ L+V+ + LF V+PATG A A++LGGV L +GDGL+ Sbjct: 69 ADGDIYAADVRSGAGDVIAEGPGTPSVGLDVDQR-GRLFVAGGPAGDARVIDTRTG--ELLASYRL-GSGAT-FVNDVIVTRDAAWFTDSQQAQLYRLPLGP-AGALPP--QDAVEALPLTGDFVLQPGFNANGIEVTPDGKALLVIQSATSTLFRVDPATGVATAVDLGGVPLTNGDGLL 241
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Match: D7G508_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G508_ECTSI) HSP 1 Score: 139 bits (349), Expect = 1.030e-36 Identity = 89/189 (47.09%), Postives = 118/189 (62.43%), Query Frame = 1 Query: 13 GAIWKGDLSTGEGEAVLSEA-GEPALGLDYDRRSGYLYVAGSFAGTARVYDTKTANFELVANLTLVGSNATGLVNDVIVTDTA--AYFTDSLLAQLYAVPLDKDSGSLADGNETTVETIPLL-------GFPLLENTVNANGIEVTCDGRTLIVVNMGSGELFTVNPATGEAAAINLGGVLV-HGDGLV 546 G+IWKGDL TG G V+ G ALG+D+DRRS YL+V G+F+G+ +YDT T +F LVA + L G+ LVNDVI+ + AY T+S Q Y + LD + G L +G T E IPL G + + +N+NGI +T D +LI+VN SGELF V+P TG+A I+LGG L+ GDGLV Sbjct: 51 GSIWKGDLETGVGSVVIEGGNGTTALGIDFDRRSDYLWVCGAFSGSLAIYDT-TDDFSLVAEIQL-GTVGASLVNDVIIHPRSEYAYITESSQLQFYRIALD-EYGRLPNGPNTVAEVIPLSSDFSFQPGEIIADQALNSNGIVITDDLSSLIIVNYQSGELFAVDPDTGKATLIDLGGDLILGGDGLV 236
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Match: A0A2E0ZGA0_9CHLR (Superoxide dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZGA0_9CHLR) HSP 1 Score: 137 bits (344), Expect = 3.240e-36 Identity = 88/182 (48.35%), Postives = 109/182 (59.89%), Query Frame = 1 Query: 7 ADGAIWKGDLSTGEGEAVLSEAGEPALGLDYDRRSGYLYVAGSFAGTARVYDTKTANFELVANLTLVGSNATGLVNDVIVTDTAAYFTDSLLAQLYAVPLDKDSGSLADGNETTVETIPLLG-FPLLENTVNANGIEVTCDGRTLIVVNMGSGELFTVNPATGEAAAINLGGVLVH-GDGLV 546 ADG I+ DLSTG GE +L G PA+GLD+DRR+GYL+V+G G R+Y+T T +LV + G G VNDVIVT AAYFTDS + LY V LD AD T+ L G F + N NGI T +G LI+V+ GEL+ V+P TGEA I+LGG V+ GDGLV Sbjct: 59 ADGDIYTVDLSTGAGEILLEGPGTPAVGLDFDRRTGYLFVSGGPNGDGRIYNTHTG--DLVTSYDFAG----GFVNDVIVTPHAAYFTDSFMPVLYKVDLDDSGTPGADS------TLSLSGDFVFVPGGFNTNGIVATPNGNALIIVHSSRGELYKVDPQTGEATLIDLGGENVNSGDGLV 228
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Match: A0A847FTN8_9CHLR (Superoxide dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A847FTN8_9CHLR) HSP 1 Score: 136 bits (342), Expect = 9.820e-36 Identity = 88/183 (48.09%), Postives = 110/183 (60.11%), Query Frame = 1 Query: 7 ADGAIWKGDLSTGEGEAVL-SEAGEPALGLDYDRRSGYLYVAGSFAGTARVYDTKTANFELVANLTLVGSNATGLVNDVIVTDTAAYFTDSLLAQLYAVPLDKDSGSLADGNETTVETIPLLG-FPLLENTVNANGIEVTCDGRTLIVVNMGSGELFTVNPATGEAAAIN-LGGVLVHGDGLV 546 A GAI+ GDL TGEG ++ + A+GL +D +GYL+VAG G A VYDT+T L S VNDV+VT AAYFTDS +Y VPL +GSL D +E VE + L G F +E NANGI+ T +G+TLI+VN +G LF VNP TGEA I LGG L GDG++ Sbjct: 67 ATGAIYSGDLRTGEGALLVPDQVDRTAVGLAFDNSTGYLFVAGGPDGAAYVYDTRTGESLAEYPLADPASTLGTFVNDVVVTKGAAYFTDSFRPVVYRVPL-APNGSLPDPSE--VEILELTGDFDFVEGAFNANGIDATPNGKTLIIVNSSTGTLFRVNPCTGEATEIPVLGGELTAGDGIL 246
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Match: A0A7V9D0T6_9CHLR (Superoxide dismutase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9D0T6_9CHLR) HSP 1 Score: 133 bits (335), Expect = 1.840e-35 Identity = 89/178 (50.00%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 22 WKGDLSTGEGEAVLSEAG-EPALGLDYDRRSGYLYVAGSFAGTARVYDTKTANFELVANLTLVGSNATGLVNDVIVTDTAAYFTDSLLAQLYAVPLDKDSGSLADGNETTVETIPLLG-FPLLENTVNANGIEVTCDGRTLIVVNMGSGELFTVNPATGEAAAINLGGV-LVHGDGLV 546 +KGDL TGEG+ ++ G A+GL D LYVAG G A VYDT+T + LT GS VNDV+VT AAYFTDS LY VP+ D G++AD +E VETI L G F +E N NGIE T +G+ LIVVN G+L+TV+P TG A +I+LGGV L +GDGL+ Sbjct: 1 FKGDLRTGEGDVLVDPVGGRAAIGLATDASGQRLYVAGGPTGQAYVYDTETGDLLAEYQLTAPGS----FVNDVVVTSDAAYFTDSFRPVLYRVPIAPD-GTVADASE--VETIVLGGEFEFIEGAFNLNGIEATPNGKQLIVVNSTLGQLYTVDPNTGFAESIDLGGVQLFNGDGLL 171
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Match: A0A643JWK0_9EURY (Superoxide dismutase n=2 Tax=Haloferax TaxID=2251 RepID=A0A643JWK0_9EURY) HSP 1 Score: 133 bits (335), Expect = 9.380e-35 Identity = 87/182 (47.80%), Postives = 111/182 (60.99%), Query Frame = 1 Query: 7 ADGAIWKGDLSTGEGEAVLSEAGEPALGLDYDRRSGYLYVAGSFAGTARVYDTKTANFELVANLTLVGSNATGLVNDVIVTDTAAYFTDSLLAQLYAVPLDKDSGSLAD-GNETTVETIPLLGFPLLENTVNANGIEVTCDGRTLIVVNMGSGELFTVNPATGEAAAINLGGVLVH-GDGLV 546 A GAI++GDL TG G+ + G PA+GL +D RS YL+VAG G A VYD T LVA+ L S VNDV+VT TAAYFTDS LY +PL G+ D N++ VE IPL G NANGI+ +G+ LIVVN +G L+ V+PA+G+A I+LGG V GDG++ Sbjct: 70 AGGAIYRGDLRTGSGDVFVPPTGGPAVGLSHDARSNYLFVAGGPTGRASVYDADTG--ALVADYELQDSQ---FVNDVVVTRTAAYFTDSARPSLYRIPL----GAGGDVPNQSAVEEIPLSGDFTSVAGFNANGIDAPPNGKYLIVVNTSTGLLYKVDPASGDATEIDLGGETVTAGDGIL 242
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Match: A0A1G9YHJ4_ALLAB (Sugar lactone lactonase YvrE n=2 Tax=Allokutzneria albata TaxID=211114 RepID=A0A1G9YHJ4_ALLAB) HSP 1 Score: 131 bits (329), Expect = 5.350e-34 Identity = 84/181 (46.41%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 10 DGAIWKGDLSTGEGEAVLSEAGEPALGLDYDRRSGYLYVAGSFAGTARVYDTKTANFELVANLTLVGSNATGLVNDVIVTDTAAYFTDSLLAQLYAVPLDKDSGSLADGNETTVETIPLLGFPLLENTVNANGIEVTCDGRTLIVVNMGSGELFTVNPATGEAAAINLGGV-LVHGDGLVR 549 DG++ K DL TG G+ + + G P++GL D+R G L++AG G ARV D++T +L+A+ L G+ VNDV++T AAYFTDS A LY +PL ++ + A ETIPL G +NANGIE T DGR L+VVN +G+LF V+P TG A ++LGGV L +GDGL+R Sbjct: 61 DGSVHKVDLRTGRGDRLSAGPGTPSVGLKIDKR-GRLFIAGGAGGDARVVDSRTG--KLLASYALGGA----FVNDVVLTGDAAYFTDSRKAVLYKLPLGRELPAKA-------ETIPLGGEWEQVEGLNANGIETTPDGRNLLVVNSTTGKLFRVDPRTGSAKLVDLGGVVLTNGDGLLR 227 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6528.15224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6528.15224.1 >prot_L-elsbetiae_contig6528.15224.1 ID=prot_L-elsbetiae_contig6528.15224.1|Name=mRNA_L-elsbetiae_contig6528.15224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp NGADGAIWKGDLSTGEGEAVLSEAGEPALGLDYDRRSGYLYVAGSFAGTAback to top mRNA from alignment at L-elsbetiae_contig6528:7560..9060- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6528.15224.1 ID=mRNA_L-elsbetiae_contig6528.15224.1|Name=mRNA_L-elsbetiae_contig6528.15224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1501bp|location=Sequence derived from alignment at L-elsbetiae_contig6528:7560..9060- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6528:7560..9060- >mRNA_L-elsbetiae_contig6528.15224.1 ID=mRNA_L-elsbetiae_contig6528.15224.1|Name=mRNA_L-elsbetiae_contig6528.15224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig6528:7560..9060- (Laminarionema elsbetiae ELsaHSoW15)back to top |