mRNA_L-elsbetiae_contig6506.15197.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6506.15197.1
Unique NamemRNA_L-elsbetiae_contig6506.15197.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: D7G8P6_ECTSI (Adenosylmethionine decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8P6_ECTSI)

HSP 1 Score: 565 bits (1457), Expect = 1.580e-201
Identity = 270/277 (97.47%), Postives = 273/277 (98.56%), Query Frame = 1
Query:    1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFDVEKV 831
            GCRALTR SLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALE+QGLVLEWMGYSRKNFTFP DQLFPHSSF+QELQYL AH HLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFDVEK+
Sbjct:  101 GCRALTRQSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEQQGLVLEWMGYSRKNFTFPSDQLFPHSSFEQELQYLRAHTHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFDVEKI 377          
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A835ZL65_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL65_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 1.230e-140
Identity = 196/285 (68.77%), Postives = 235/285 (82.46%), Query Frame = 1
Query:    1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYK------------EACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFD 819
            GCRALTR  LD++C RA+CTIL ++SN +LDAYVLSESSLFVY HKVV+KTCGTTTLLRC+A LLQ A    G+ LEW+GYSRKNFTFPGDQL+PH+SF+QEL YL  H HL  RL+G+G+VLGPVTGDHWFVY+ADK DRP++TATDR IN+MMFD+HPD A  F +             A   GR+MT  +G+A+LVPGA VD  AF+PCGYSMNAI ++SYYTIHVTPE +CSYASFETNNP++SYRSI+NNVLNVFRP+R+VLTM+AD+AGL T+ E+PFD
Sbjct:  116 GCRALTRAQLDQICKRARCTILSRMSNAHLDAYVLSESSLFVYRHKVVVKTCGTTTLLRCIAYLLQHAGRGLGMELEWVGYSRKNFTFPGDQLYPHASFEQELDYLRQHQHLSARLDGSGHVLGPVTGDHWFVYVADKYDRPNFTATDRVINIMMFDLHPDCAAKFVRGDAAAGADGTAVSARAAGRDMTVASGVADLVPGATVDACAFEPCGYSMNAIQFESYYTIHVTPEAACSYASFETNNPYRSYRSIVNNVLNVFRPRRFVLTMMADEAGLKTMAESPFD 400          
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A835YIR2_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR2_9STRA)

HSP 1 Score: 401 bits (1030), Expect = 4.930e-137
Identity = 195/286 (68.18%), Postives = 233/286 (81.47%), Query Frame = 1
Query:    1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGL--VLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKE-----------ACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFD 819
            GCRALTR  LD++C RA+CTIL ++SN +LDAYVLSESSLFVY +KVV+KTCGTTTLLRCVA LLQ A    GL   LEW+GYSRKNFTFPGDQL+PH+SF+QEL YL  H HL  RL+G+G+VLGPVTGDHWFVY+ADK DRP++TATDR  N+MMFDMHP++A  F ++           A   G  MT  +GIA+LVPGA +D  AF+PCGYSMNAI ++SYYTIHVTPE +CSYASFETNNP++SYRSI+NNVL VFRP+R+VLTM+AD+AGL T+ ENPFD
Sbjct:   63 GCRALTREQLDQICKRARCTILSRMSNAHLDAYVLSESSLFVYRYKVVIKTCGTTTLLRCVAYLLQHAGAHGGLGLELEWVGYSRKNFTFPGDQLYPHASFEQELAYLRQHQHLSARLDGSGHVLGPVTGDHWFVYVADKYDRPNFTATDRICNIMMFDMHPESAACFVRDDIGPDGRHTTTARAAGHAMTVASGIADLVPGAAIDACAFEPCGYSMNAIQFESYYTIHVTPEAACSYASFETNNPYRSYRSIVNNVLGVFRPRRFVLTMMADEAGLKTMAENPFD 348          
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: W7T3C1_9STRA (Adenosylmethionine decarboxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3C1_9STRA)

HSP 1 Score: 372 bits (954), Expect = 4.320e-124
Identity = 180/272 (66.18%), Postives = 218/272 (80.15%), Query Frame = 1
Query:    1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQ--AALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITEN 810
            GCR LTR  LD +C +A+CTIL+Q+SN Y DAYVLSESSLFV+P K+++KTCGTTTLLRC+  LL+  AAL   GL LEW+GYSRKN++FPGDQ FPHSSF QEL YL +H+ L  +LNG+GYVLGPVTGDH++VY+AD+C RP Y   DR +N+MMFDM P+ A  FYKE     +EMT+K+GIA+LVPGA +D FAFDPCGYSMNAI Y +Y TIHVTPE  CSYASFETN P KSY S+INNVL VFRP+R+VLTM+AD+A +  +  N
Sbjct:  149 GCRELTRRQLDVLCRKARCTILNQMSNAYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLRYTAAL---GLELEWVGYSRKNYSFPGDQAFPHSSFDQELSYLRSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYECHDRVLNIMMFDMDPEAAAVFYKEQSGDAKEMTQKSGIADLVPGASIDAFAFDPCGYSMNAITYGNYATIHVTPEADCSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADQAAVLEMESN 417          
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A7S1UFX8_9STRA (Adenosylmethionine decarboxylase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFX8_9STRA)

HSP 1 Score: 352 bits (902), Expect = 3.860e-117
Identity = 165/273 (60.44%), Postives = 211/273 (77.29%), Query Frame = 1
Query:    1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFD 819
            GCR L R SL+R+ +RAKCTI+  +SN +LDAYVLSESSLFVYP+KVV+KTCG TTLLRC+  LL+ A    G  LEW+GYSRKNF +P  QLFPH+SF  E+ YL  H+    +L+G+ ++LGP+TGDHWFVY+ADK +RP    +DRTIN+MMFDMH D A+ FYK+  PT  E T  +GI  L+PGA +D   F+PCGYSMNAI +DSY TIH+TPE +CSYASFETN   +SY ++I NVL +FRP+R+VLTM AD+AGL +++E+PF+
Sbjct:  103 GCRNLPRASLNRILTRAKCTIMSIVSNSHLDAYVLSESSLFVYPYKVVLKTCGATTLLRCLPYLLREARRYCGCELEWVGYSRKNFAYPTQQLFPHTSFNDEMGYLQKHSKYYDKLSGSAHILGPLTGDHWFVYVADKSERPMEMESDRTINIMMFDMHEDAAQMFYKDKYPTAEEQTMASGINMLMPGAQIDAQCFEPCGYSMNAIQHDSYSTIHITPESACSYASFETNTKLRSYTALIRNVLQLFRPRRFVLTMFADEAGLASLSEDPFE 375          
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A7S0C0C1_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0C1_9STRA)

HSP 1 Score: 336 bits (861), Expect = 9.040e-112
Identity = 162/288 (56.25%), Postives = 206/288 (71.53%), Query Frame = 1
Query:    1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPD-YTATDRTINMMMFDMHPDTAKHFYKE--------------ACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFD 819
            G R + R  LDR+C+RA+CTIL  ISN YLDAYVLSESSLFVYP+  V+KTCGTTTLLRC+A L++ A    GL ++W+GYSRKNF+FPGDQ FPH SF QEL+YL +H +L +RL G GY LGPVT DHWFV++AD+ +R +  T TDR +N+MMFD+    A HFY +                   + MT++ GI  L PGAV+D  AF+PCGYSMNAIL+ SY T+H+TPE+  SYASFETN    SY S+INNV+ +F PKR+V+T++AD+ GL  +   PFD
Sbjct:   22 GLRKIARTDLDRVCARARCTILSSISNQYLDAYVLSESSLFVYPYMAVLKTCGTTTLLRCIAILIELA-RTVGLEIDWVGYSRKNFSFPGDQAFPHESFHQELEYLSSHHNLSERLQGNGYTLGPVTSDHWFVFVADQTNRANSQTDTDRVLNIMMFDIDQTVASHFYYDQYEGQMEGESEDEAVSRISKTMTRRAGIDSLCPGAVIDPRAFEPCGYSMNAILFQSYSTMHITPEDGSSYASFETNQRVSSYNSLINNVIRMFNPKRFVMTLMADELGLEQMDSTPFD 308          
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A8J2WZ11_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ11_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.640e-110
Identity = 162/274 (59.12%), Postives = 205/274 (74.82%), Query Frame = 1
Query:    1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAH-AHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFY------KEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTI 801
            GCR LTR  LD +   A+CTIL ++SN +LDAYVLSESSLFVY HKVV+KTCG TTLLRC+  L+Q A    GL LEW+GYSRKN+ FP DQ+ PH  F+ EL+YL AH    EK  +G+GYVLGP+TGDHWFVY++D+C+RP  +AT+RT+N+MMFD+  D  +HF+       +    GR MT+++G+  L+PG V DD AF PCGYS+NA+ ++SY T+HVTPE SCSYASFETN   KSY S++ NVL VFRPKR VLT+ AD+AGL  +
Sbjct:   50 GCRGLTRAQLDCILEEARCTILSRMSNAHLDAYVLSESSLFVYAHKVVVKTCGRTTLLRCLRRLVQEATSTLGLQLEWVGYSRKNYCFPDDQVAPHGCFEDELRYLKAHQGDAEKVFDGSGYVLGPLTGDHWFVYVSDQCERPASSATERTVNVMMFDLPEDVRRHFHLQGDEDSDLRAAGRAMTQRSGLKALIPGKV-DDHAFAPCGYSLNALSFESYTTVHVTPEASCSYASFETNTALKSYGSLVKNVLAVFRPKRVVLTLFADEAGLREL 322          
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A7S2YHD0_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YHD0_9STRA)

HSP 1 Score: 328 bits (840), Expect = 2.190e-107
Identity = 164/286 (57.34%), Postives = 201/286 (70.28%), Query Frame = 1
Query:    1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTA-TDRTINMMMFDMHPDTAKHFYKEACPTG--------------REMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENP 813
            G R L RP LDR+C RA+CTI+  +SN +LDAYVLSESSLFVYP+ +V+KTCGTTTLLRC+  L+       GL ++W+GYSRKNF FPGDQ FPH SFQQEL YL +H  L  RL+G GY LGPVTGDHWFVY+AD   R      TDR +N+MMFD+    A+ F+ +   TG              +E T K+GI EL PGAV+D  AF+PCGYSMNAIL+ SY TIH+TPE   SYASFETN   KSY+S+I+NV+  FRPK + LT++AD+ GL  + ENP
Sbjct:  103 GLRRLARPDLDRICERARCTIISSVSNRFLDAYVLSESSLFVYPYMLVLKTCGTTTLLRCIKILIDLG-HRLGLEIDWVGYSRKNFNFPGDQSFPHQSFQQELDYLYSHRSLCDRLDGNGYTLGPVTGDHWFVYVADHTTRKTSEFDTDRVLNIMMFDIDETVAQKFHYDQYKTGIEGESKDDEMNRISKEQTVKSGINELCPGAVIDPRAFEPCGYSMNAILFHSYSTIHITPEAGSSYASFETNQKVKSYKSLISNVIRTFRPKHFCLTLMADEGGLLEMKENP 387          
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: A0A1Z5JP29_FISSO (Adenosylmethionine decarboxylase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP29_FISSO)

HSP 1 Score: 326 bits (836), Expect = 4.350e-107
Identity = 163/287 (56.79%), Postives = 203/287 (70.73%), Query Frame = 1
Query:    1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTA--TDRTINMMMFDMHPDTAKHFYKEACPTGRE--------------MTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENP 813
            G R LTR  LDR+C+RA+CTIL  ISN YLDAYVLSESSLFVYP+ +V+KTCGTTTLLRC+ATL+       GL ++W+GYSRKNF FPGDQ FPH SF QEL YL +H +L +RL+G+GY LGPVTGDHWFV++AD+  R       TDR +N+MMFD+    A+ FY        +               TK  GI  L PGA++D  AF+PCGYSMNA+L+ SY T+H+TPE   SYASFETN    SY+S+I+NV+  FRPKR+V+T++AD+ GL  ITENP
Sbjct:   87 GLRNLTREQLDRICARARCTILSCISNQYLDAYVLSESSLFVYPYMLVLKTCGTTTLLRCIATLIDLG-RTLGLEIDWVGYSRKNFNFPGDQSFPHQSFHQELDYLYSHRNLCERLDGSGYTLGPVTGDHWFVFVADQTLRSKALDCDTDRVLNIMMFDIDEQVAELFYYNRYQESDDEPIAENDMKRIAAAQTKAAGIDSLCPGALIDSAAFEPCGYSMNAVLFRSYSTMHITPETGSSYASFETNQKVSSYKSLISNVIRTFRPKRFVMTLMADEGGLQQITENP 372          
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Match: B8C3Z3_THAPS (Adenosylmethionine decarboxylase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Z3_THAPS)

HSP 1 Score: 320 bits (819), Expect = 5.180e-107
Identity = 154/262 (58.78%), Postives = 194/262 (74.05%), Query Frame = 1
Query:    1 GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQQELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDR-PDYTATDRTINMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADK 783
            G R L R  LDR+C RA+CTIL  +SN YLDAYVLSESSLFVYP+ +V+KTCGTTTLLRCVATL++    + GL ++W+GY+RKNF FPGDQ+FPH SF QE+ YL +H +L +RLNG GY LGPVT DHWFV++AD   R  +   TDR +N+MMFD+    A+ FY +   +    TK  GI  LVPGA +D  AF+PCGYSMNAIL+ SY T+H+TPEE  SYASFETN    +Y  +I NV+  FRPKR+V+T++AD+
Sbjct:    1 GLRTLPRSDLDRICQRARCTILSSVSNRYLDAYVLSESSLFVYPYMIVLKTCGTTTLLRCVATLIEIG-RKIGLEIDWVGYNRKNFNFPGDQMFPHGSFHQEMDYLYSHRNLCERLNGNGYTLGPVTSDHWFVFVADHTTRYTECNDTDRVLNIMMFDIDQTVAQKFYYDQYESRIHQTKGAGIDALVPGATIDPRAFEPCGYSMNAILFHSYSTMHITPEEGSSYASFETNQKLSNYTPLICNVVRAFRPKRFVMTLMADE 261          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6506.15197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8P6_ECTSI1.580e-20197.47Adenosylmethionine decarboxylase n=2 Tax=Ectocarpu... [more]
A0A835ZL65_9STRA1.230e-14068.77Adenosylmethionine decarboxylase n=1 Tax=Tribonema... [more]
A0A835YIR2_9STRA4.930e-13768.18Adenosylmethionine decarboxylase n=1 Tax=Tribonema... [more]
W7T3C1_9STRA4.320e-12466.18Adenosylmethionine decarboxylase n=2 Tax=Monodopsi... [more]
A0A7S1UFX8_9STRA3.860e-11760.44Adenosylmethionine decarboxylase n=2 Tax=Phaeomona... [more]
A0A7S0C0C1_9STRA9.040e-11256.25Adenosylmethionine decarboxylase n=1 Tax=Proboscia... [more]
A0A8J2WZ11_9STRA1.640e-11059.12Adenosylmethionine decarboxylase n=1 Tax=Pelagomon... [more]
A0A7S2YHD0_9STRA2.190e-10757.34Adenosylmethionine decarboxylase n=1 Tax=Amphipror... [more]
A0A1Z5JP29_FISSO4.350e-10756.79Adenosylmethionine decarboxylase n=2 Tax=Fistulife... [more]
B8C3Z3_THAPS5.180e-10758.78Adenosylmethionine decarboxylase (Fragment) n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6506contigL-elsbetiae_contig6506:4945..7468 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score565.8
Seed ortholog evalue1.1e-158
Seed eggNOG ortholog2880.D7G8P6
Preferred nameAMD1
KEGG rclassRC00299
KEGG koko:K01581,ko:K01611,ko:K15203
KEGG ReactionR00178,R00670
KEGG Pathwayko00270,ko00330,ko00480,ko01100,ko01110,ko01130,map00270,map00330,map00480,map01100,map01110,map01130
KEGG ModuleM00034,M00133,M00134
Hectar predicted targeting categoryother localisation
GOsGO:0001701,GO:0003674,GO:0003824,GO:0004014,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006576,GO:0006595,GO:0006596,GO:0006597,GO:0006732,GO:0006766,GO:0006767,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0007275,GO:0008150,GO:0008152,GO:0008215,GO:0008216,GO:0008295,GO:0009058,GO:0009108,GO:0009110,GO:0009308,GO:0009309,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009792,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0015939,GO:0015940,GO:0016032,GO:0016053,GO:0016458,GO:0016829,GO:0016830,GO:0016831,GO:0017144,GO:0019058,GO:0019079,GO:0019222,GO:0019752,GO:0019808,GO:0019810,GO:0032501,GO:0032502,GO:0032787,GO:0034641,GO:0042364,GO:0042398,GO:0042401,GO:0042742,GO:0043009,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046500,GO:0048519,GO:0048731,GO:0048856,GO:0050789,GO:0050829,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0070405,GO:0071704,GO:0072330,GO:0097164,GO:0098542,GO:0099402,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.S-adenosylmethioninamine biosynthetic process
EggNOG OGsKOG0788@1,KOG0788@2759
EC4.1.1.17,4.1.1.50
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03021
Ec32 ortholog descriptionS-Adenosylmethionine decarboxylase
Ec32 orthologEc-22_002520.1
Exons6
Model size831
Cds size831
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6506.15197.1prot_L-elsbetiae_contig6506.15197.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6506 4945..7468 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816718.867139-CDS-L-elsbetiae_contig6506:4944..50621622816718.867139-CDS-L-elsbetiae_contig6506:4944..5062Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 4945..5062 -
1691683763.0902243-CDS-L-elsbetiae_contig6506:4944..50621691683763.0902243-CDS-L-elsbetiae_contig6506:4944..5062Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 4945..5062 -
1622816718.8787446-CDS-L-elsbetiae_contig6506:5394..55051622816718.8787446-CDS-L-elsbetiae_contig6506:5394..5505Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 5395..5505 -
1691683763.1028984-CDS-L-elsbetiae_contig6506:5394..55051691683763.1028984-CDS-L-elsbetiae_contig6506:5394..5505Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 5395..5505 -
1622816718.8896518-CDS-L-elsbetiae_contig6506:5787..59391622816718.8896518-CDS-L-elsbetiae_contig6506:5787..5939Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 5788..5939 -
1691683763.1135147-CDS-L-elsbetiae_contig6506:5787..59391691683763.1135147-CDS-L-elsbetiae_contig6506:5787..5939Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 5788..5939 -
1622816718.9000123-CDS-L-elsbetiae_contig6506:6066..61581622816718.9000123-CDS-L-elsbetiae_contig6506:6066..6158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 6067..6158 -
1691683763.1248968-CDS-L-elsbetiae_contig6506:6066..61581691683763.1248968-CDS-L-elsbetiae_contig6506:6066..6158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 6067..6158 -
1622816718.910126-CDS-L-elsbetiae_contig6506:6685..69051622816718.910126-CDS-L-elsbetiae_contig6506:6685..6905Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 6686..6905 -
1691683763.135016-CDS-L-elsbetiae_contig6506:6685..69051691683763.135016-CDS-L-elsbetiae_contig6506:6685..6905Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 6686..6905 -
1622816718.9279451-CDS-L-elsbetiae_contig6506:7330..74681622816718.9279451-CDS-L-elsbetiae_contig6506:7330..7468Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 7331..7468 -
1691683763.1455247-CDS-L-elsbetiae_contig6506:7330..74681691683763.1455247-CDS-L-elsbetiae_contig6506:7330..7468Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6506 7331..7468 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6506.15197.1

>prot_L-elsbetiae_contig6506.15197.1 ID=prot_L-elsbetiae_contig6506.15197.1|Name=mRNA_L-elsbetiae_contig6506.15197.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp
GCRALTRPSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMK
TCGTTTLLRCVATLLQAALEEQGLVLEWMGYSRKNFTFPGDQLFPHSSFQ
QELQYLGAHAHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRT
INMMMFDMHPDTAKHFYKEACPTGREMTKKTGIAELVPGAVVDDFAFDPC
GYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRP
KRWVLTMVADKAGLNTITENPFDVEKV
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mRNA from alignment at L-elsbetiae_contig6506:4945..7468-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6506.15197.1 ID=mRNA_L-elsbetiae_contig6506.15197.1|Name=mRNA_L-elsbetiae_contig6506.15197.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2524bp|location=Sequence derived from alignment at L-elsbetiae_contig6506:4945..7468- (Laminarionema elsbetiae ELsaHSoW15)
GGCTGCCGAGCATTGACCAGGCCAAGCTTGGACCGCATGTGCTCGCGCGC AAAGTGCACCATCTTGCACCAAATCTCCAACGATTACCTAGACGCCTACG TGTTGTCGGAGAGTAGCCTCTTCGTGTACCCCCACAAGGTAACACAAGAC GTGCGTGAAGTTACAGGAGTGTGCACGAAATACGAACACACATGTTGATG GATTCACCCTACTCAAACATGAGGTGTTGGATATGATGAAAAAACTGGGC CTGCGCCTTCTTTTTTATTTCAAGAGAGACTACATAAGATGCATTCCAAA TGTCAGCGGTTTACGTACGTCCAACCTGTGAAAAACGTCGTTCCAGGGGG ACTGTTGTAGACACACTACCCTCCTCATCGCAACCGACCACGGTGGTCCA AAATCAGCAAGCCGTGTGTTGGTTCGTTTTGGGTATGATAGTTTCGTTTA AGTAGGGCGCAACGAGCGTGGATCGAAGGTATCAGGAAGACACCGCGGTA GATGGCGTGGCATCACCCCAGTGTTTCACGGCCATTTCATATTTACACGA TTTCTTCACGCAGGTTGTCATGAAGACATGTGGCACGACGACACTCTTGC GGTGCGTTGCCACGCTCTTGCAAGCAGCACTCGAGGAGCAAGGTCTGGTT CTGGAGTGGATGGGCTACTCTCGGAAGAACTTTACGTTTCCTGGTGACCA GCTCTTCCCGCACTCGAGTTTCCAGCAGGAGCTGCAGTATCTAGGGGCGC ATGCTCACCTCGAGAAGCGACTTAACGGCGCAGGTATTGATTGGTACGGC CAGTAGACACAGGGGGATAACTTGAATCAGCACGTGGTAAAGTATGAAGG AAGACTGATGCAGAGTGAACAAATTGAAATAGCACGAGGCGGTGCAGGGG TGAAGCAACGCTTAACTTAAAAGAGTGAGGGAGGTGGTCGCGCGAGCCAC TACCGGACAGCAAAGTTGATGCCATTGCGATGCGGGGAATCGAATCAGAG TCAATTTCTTTCCATCCACACTCATTTTCGCCAATTCTTAAAACGTCGTC GGGAGTAGTCGCGGCGTAGGCTTCGGGGGATGCGTCTGTTCGTGCCGCGG CTGGCTGCACGCACGTTTCATTTTGAACGGGGTTGTCGTCCGCATTGCCG GCCGGAGACGCAGTGGTAGCTCTTGTTCACGTATAGAGGGTTTGAACTCG AGATGCATTAAATAATTAGCCTACAAGTAGGTCCGCTCATTTCGCAAGAT GAAGGGCATACATAAGTAGTAGGTGATCTTATCGTGCGCCTGACCCTGCC TGTGGTGCAGGTTATGTTTTGGGTCCCGTGACAGGAGATCACTGGTTCGT CTACATTGCAGACAAGTGCGATCGCCCGGACTACACTGCAACGGACCGCA CGGTGAGCTCGATGGAAACGATGAAATAGTTTTGCTTCCCATACATGAAT TGGTGGTGGTGCGAGTACAAACGCACGTTCTTGACTAGCACGCGCTAACC ATGGTCTTGCCGGTGTTTTGCCCGGTCAGATCAACATGATGATGTTCGAC ATGCATCCTGATACGGCGAAGCATTTCTACAAGGAGGCGTGCCCGACTGG TCGAGAGATGACAAAGAAGACTGGAATCGCCGAGCTTGTGCCGGGAGCTG TTGTGGACGACTTCGCGTTCGACCCATGCGGGTGGGTATATGTTCAGCTT TTCGTAAAAATGCTGTGCAGAGAGAGCTACGGTATTCCAGCTGGTTTCCA TGCCACATTCATTGCGGACAAGCTGTCAGCGACACGCGTGCCATGTTAAA ATCCCACTCTTTCGTTCAGAGATCGCGGCGACCAAACGTCGGTGGTGTTG TCGCTAGAGTTTTATGGGAGGATTGGGGGTATTCTTGTACTGAATACAGG TGACGTATCTTGACGACGTTCGTCCCTGACTCCGACCACCCAAATTATTC TGTCTCTGCTCAGGTATTCAATGAATGCCATTTTGTACGACTCGTACTAT ACGATCCATGTCACTCCAGAGGAGTCGTGCAGCTACGCAAGCTTTGAGAC CAACAATCCGTTCAAGTCTTACAGGTGCGTGTACGGCGTCGAATAAAGGC AGTGTGCCCTTTGATTTTTTTTGTGTGCCGCACTGCTGTTCAAGATCCGA GTCGGCGATGAGTTTGTTGCGAGAAAAGAGCAAGGCAATGATCGCTTGAG CGGTCTTCTCCCAAATTTTGGAATGTCCTTGTAGTGAGCAACGCCGCTTT CTACTCCTCCTCGCGTGGCGTGCATATCCCAGCGACCAGGAGAGCAACGG CGTTTTACCGTGTGATACGATAACTTTTTTGATTGGTCTCATCAGTCTCA GTAAACAGCAACATCTGAGCCCTCTGTATTTCACTTTTGCCCCGACATGT GCGCAGATCAATCATCAACAACGTCCTCAATGTGTTCCGGCCGAAGCGAT GGGTGCTCACCATGGTTGCGGACAAGGCCGGGCTCAACACCATCACAGAG AACCCGTTTGACGTGGAAAAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6506:4945..7468-

>mRNA_L-elsbetiae_contig6506.15197.1 ID=mRNA_L-elsbetiae_contig6506.15197.1|Name=mRNA_L-elsbetiae_contig6506.15197.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1662bp|location=Sequence derived from alignment at L-elsbetiae_contig6506:4945..7468- (Laminarionema elsbetiae ELsaHSoW15)
GGCTGCCGAGCATTGACCAGGCCAAGCTTGGACCGCATGTGCTCGCGCGC
AAAGTGCACCATCTTGCACCAAATCTCCAACGATTACCTAGACGCCTACG
TGTTGTCGGAGAGTAGCCTCTTCGTGTACCCCCACAAGGGCTGCCGAGCA
TTGACCAGGCCAAGCTTGGACCGCATGTGCTCGCGCGCAAAGTGCACCAT
CTTGCACCAAATCTCCAACGATTACCTAGACGCCTACGTGTTGTCGGAGA
GTAGCCTCTTCGTGTACCCCCACAAGGTTGTCATGAAGACATGTGGCACG
ACGACACTCTTGCGGTGCGTTGCCACGCTCTTGCAAGCAGCACTCGAGGA
GCAAGGTCTGGTTCTGGAGTGGATGGGCTACTCTCGGAAGAACTTTACGT
TTCCTGGTGACCAGCTCTTCCCGCACTCGAGTTTCCAGCAGGAGCTGCAG
TATCTAGGGGCGCATGCTCACCTCGAGAAGCGACTTAACGGCGCAGGTTG
TCATGAAGACATGTGGCACGACGACACTCTTGCGGTGCGTTGCCACGCTC
TTGCAAGCAGCACTCGAGGAGCAAGGTCTGGTTCTGGAGTGGATGGGCTA
CTCTCGGAAGAACTTTACGTTTCCTGGTGACCAGCTCTTCCCGCACTCGA
GTTTCCAGCAGGAGCTGCAGTATCTAGGGGCGCATGCTCACCTCGAGAAG
CGACTTAACGGCGCAGGTTATGTTTTGGGTCCCGTGACAGGAGATCACTG
GTTCGTCTACATTGCAGACAAGTGCGATCGCCCGGACTACACTGCAACGG
ACCGCACGGTTATGTTTTGGGTCCCGTGACAGGAGATCACTGGTTCGTCT
ACATTGCAGACAAGTGCGATCGCCCGGACTACACTGCAACGGACCGCACG
ATCAACATGATGATGTTCGACATGCATCCTGATACGGCGAAGCATTTCTA
CAAGGAGGCGTGCCCGACTGGTCGAGAGATGACAAAGAAGACTGGAATCG
CCGAGCTTGTGCCGGGAGCTGTTGTGGACGACTTCGCGTTCGACCCATGC
GGATCAACATGATGATGTTCGACATGCATCCTGATACGGCGAAGCATTTC
TACAAGGAGGCGTGCCCGACTGGTCGAGAGATGACAAAGAAGACTGGAAT
CGCCGAGCTTGTGCCGGGAGCTGTTGTGGACGACTTCGCGTTCGACCCAT
GCGGGTATTCAATGAATGCCATTTTGTACGACTCGTACTATACGATCCAT
GTCACTCCAGAGGAGTCGTGCAGCTACGCAAGCTTTGAGACCAACAATCC
GTTCAAGTCTTACAGGTATTCAATGAATGCCATTTTGTACGACTCGTACT
ATACGATCCATGTCACTCCAGAGGAGTCGTGCAGCTACGCAAGCTTTGAG
ACCAACAATCCGTTCAAGTCTTACAGATCAATCATCAACAACGTCCTCAA
TGTGTTCCGGCCGAAGCGATGGGTGCTCACCATGGTTGCGGACAAGGCCG
GGCTCAACACCATCACAGAGAACCCGTTTGACGTGGAAAAGGTGATCAAT
CATCAACAACGTCCTCAATGTGTTCCGGCCGAAGCGATGGGTGCTCACCA
TGGTTGCGGACAAGGCCGGGCTCAACACCATCACAGAGAACCCGTTTGAC
GTGGAAAAGGTG
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