mRNA_L-elsbetiae_contig65.15181.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Match: D7FKM0_ECTSI (HECT-type E3 ubiquitin transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM0_ECTSI) HSP 1 Score: 251 bits (642), Expect = 2.990e-69 Identity = 119/127 (93.70%), Postives = 126/127 (99.21%), Query Frame = 3 Query: 6 ELQRLIGGEGGRAIDVEDLKRNTLYAGGYHQSQPVMEWFWEAIESFTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQRVPEGEEGRLPSSATCMNLLKLPQYSDRQTLRQKLLYAISANAGFELT 386 ELQRLIGGEGGRAIDVEDLKRNTLYAGGYH++QPVM+WFWEAIESF+PEEQGQFLKFVTSCSRPPLLGF+RLNPPICLQRVPEG+EGRLPSSATCMNLLKLPQY DRQTLR+KLLYAISANAGFELT Sbjct: 1269 ELQRLIGGEGGRAIDVEDLKRNTLYAGGYHKTQPVMQWFWEAIESFSPEEQGQFLKFVTSCSRPPLLGFERLNPPICLQRVPEGDEGRLPSSATCMNLLKLPQYEDRQTLREKLLYAISANAGFELT 1395
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Match: A0A835YYA3_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA3_9STRA) HSP 1 Score: 190 bits (483), Expect = 3.110e-51 Identity = 89/128 (69.53%), Postives = 106/128 (82.81%), Query Frame = 3 Query: 6 ELQRLIGGEGGRAIDVEDLKRNTLYAGGYHQSQPVMEWFWEAIESFTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQRVPEGEEG-RLPSSATCMNLLKLPQYSDRQTLRQKLLYAISANAGFELT 386 ELQRL+GG+G R ID+ DL+ +T Y GGYH+SQPVM WFW+ I +FTP +Q FLKFVTSCSR PLLGF L+PP+C+Q+V GE G +LPSSATCMNLLKLP+Y R+TLR+KLLYAISA AGFELT Sbjct: 319 ELQRLVGGDGERRIDIADLRAHTTYGGGYHESQPVMHWFWDIIANFTPAQQALFLKFVTSCSRQPLLGFKHLSPPMCIQQVESGERGNKLPSSATCMNLLKLPRYDSRETLREKLLYAISAGAGFELT 446
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Match: A0A7S2G4K7_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4K7_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.240e-47 Identity = 81/129 (62.79%), Postives = 103/129 (79.84%), Query Frame = 3 Query: 6 ELQRLIGGEGGRAIDVEDLKRNTLYAGGYHQSQPVMEWFWEAIESFTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQRVPEGEEG--RLPSSATCMNLLKLPQYSDRQTLRQKLLYAISANAGFELT 386 ELQ +IGGE RAID+++L+ +T +GGYH SQP+M+WFW+ + TP++QG FLKFVTS R PLLGF+ + PPIC+Q+VP GE+G RLPS+ATCMNLLKLP Y LR+KLLYAISANAGFE++ Sbjct: 54 ELQMVIGGEA-RAIDIDNLRAHTRVSGGYHDSQPIMQWFWQVLRELTPQQQGDFLKFVTSSPRQPLLGFEYMQPPICIQKVPLGEDGPSRLPSAATCMNLLKLPDYPTCDILREKLLYAISANAGFEMS 181
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Match: A0A7R9Y9Y8_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9Y8_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.610e-46 Identity = 80/127 (62.99%), Postives = 100/127 (78.74%), Query Frame = 3 Query: 6 ELQRLIGGEGGRAIDVEDLKRNTLYAGGYHQSQPVMEWFWEAIESFTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQRVPEGEEGRLPSSATCMNLLKLPQYSDRQTLRQKLLYAISANAGFELT 386 E+Q LIGG+G ID+ DLK + Y+GGYH SQP ++ FW+ ++ FTP E FL+F+TSCSR PLLGF LNP IC+Q+VP G+LPS+ATCMNLLKLPQY D++TLR KLLYAIS+NAGF+LT Sbjct: 259 EVQLLIGGDGYHPIDLNDLKAHCAYSGGYHPSQPYIKAFWQCVDEFTPREHADFLRFITSCSRQPLLGFSSLNPKICIQKVPHEPYGKLPSAATCMNLLKLPQYDDKETLRSKLLYAISSNAGFDLT 385
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Match: W7TQY7_9STRA (HECT-type E3 ubiquitin transferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQY7_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.920e-43 Identity = 86/129 (66.67%), Postives = 103/129 (79.84%), Query Frame = 3 Query: 6 ELQRLIGGEGGRAIDVEDLKRNTLYAGGYHQSQPVMEWFWEAIESFTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQRVPEGEEG--RLPSSATCMNLLKLPQYSDRQTLRQKLLYAISANAGFELT 386 ELQ L+ GE RAID+E+L+ +T Y+GGYH SQP++ WFWEA+ S+TP+EQ FL FVTSCSR PLLGF LNPP+C+QRVP EG RLPSSATCMNLLKLP Y + LR+KLLYAI+A AGFEL+ Sbjct: 1160 ELQILLTGEK-RAIDIENLRAHTRYSGGYHPSQPIIHWFWEALRSYTPDEQAAFLMFVTSCSRQPLLGFQHLNPPVCIQRVPLTTEGGERLPSSATCMNLLKLPAYPTPEMLREKLLYAITAGAGFELS 1287
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Match: A0A7S0FT79_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FT79_9STRA) HSP 1 Score: 150 bits (378), Expect = 3.250e-39 Identity = 78/148 (52.70%), Postives = 99/148 (66.89%), Query Frame = 3 Query: 3 HELQRLIGGEGG-RAIDVEDLKRNTLYAGGYHQSQPVMEWFWEAIESFTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQ--RVPEGEE-----------------GRLPSSATCMNLLKLPQYSDRQTLRQKLLYAISANAGFELT 386 +ELQ+LI G+ + I+V L+ T+YAGGYH SQP+M+WFWE +E FTP +Q FLKF TSCSR PLLGF L P C+Q R+ E EE RLP+S+TCMNLLKLP+Y ++ LR+KLLYAI + AGFEL+ Sbjct: 26 NELQKLISGDDTVKGINVAGLRAATVYAGGYHPSQPIMQWFWEVLEEFTPSQQRDFLKFTTSCSRQPLLGFQALVPVPCIQQIRLTEDEEXXXXXQQAGGENAMISKARLPTSSTCMNLLKLPKYKSKEMLREKLLYAIESGAGFELS 173
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Match: T0RYM8_SAPDV (HECT-type E3 ubiquitin transferase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RYM8_SAPDV) HSP 1 Score: 162 bits (411), Expect = 4.320e-39 Identity = 75/127 (59.06%), Postives = 97/127 (76.38%), Query Frame = 3 Query: 6 ELQRLIGGEGGRAIDVEDLKRNTLYAGGYHQSQPVMEWFWEAIESFTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQRVPEGEEGRLPSSATCMNLLKLPQYSDRQTLRQKLLYAISANAGFELT 386 ELQ LIGG R +DV+D K NT Y GGYH SQP+M+WFW+ + +P+++G+ LKF+TSCSR PLLGF +L P +C+Q+V ++ RLPSSATCMNLLKLP YS + +R KLLYAI + AGFEL+ Sbjct: 816 ELQMLIGGAT-RDVDVDDWKANTNYGGGYHPSQPIMQWFWDIVADLSPDDRGELLKFITSCSRQPLLGFKQLQPLVCIQQVRISDDERLPSSATCMNLLKLPTYSSKDVMRAKLLYAIRSKAGFELS 941
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Match: A0A024GGC9_9STRA (HECT-type E3 ubiquitin transferase n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GGC9_9STRA) HSP 1 Score: 162 bits (411), Expect = 5.010e-39 Identity = 75/128 (58.59%), Postives = 99/128 (77.34%), Query Frame = 3 Query: 3 HELQRLIGGEGGRAIDVEDLKRNTLYAGGYHQSQPVMEWFWEAIESFTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQRVPEGEEGRLPSSATCMNLLKLPQYSDRQTLRQKLLYAISANAGFELT 386 +ELQ LIGG +AID+ D K NTLYA GYH +Q ++ WFWE + TP EQ + L+F+TS SRPPLLGF L+PP+C+Q+V ++ RLPSSATCMNLLKLP YS ++ +++KLLYAI +NAGF+L+ Sbjct: 971 NELQMLIGGNMTKAIDLSDWKANTLYASGYHPTQTLIVWFWEILAEMTPNEQSRMLQFITSVSRPPLLGFRCLDPPLCIQQVRCDDDSRLPSSATCMNLLKLPTYSSKRIMKEKLLYAIQSNAGFDLS 1098
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Match: A0A1V9ZYX8_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYX8_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.090e-38 Identity = 76/127 (59.84%), Postives = 97/127 (76.38%), Query Frame = 3 Query: 6 ELQRLIGGEGGRAIDVEDLKRNTLYAGGYHQSQPVMEWFWEAIESFTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQRVPEGEEGRLPSSATCMNLLKLPQYSDRQTLRQKLLYAISANAGFELT 386 ELQ LIGG ++V+D K NTLY GGYH SQP+++WFWE + T EE+G+ LKF+TSCSR PLLGF +L P IC+Q+V ++ RLPSSATCMNLLKLP YS ++ ++ KLLYAI + AGFEL+ Sbjct: 1497 ELQMLIGGAT-HDVNVDDWKANTLYGGGYHPSQPIVQWFWEVVFELTSEERGELLKFITSCSRQPLLGFKQLQPLICIQQVRISDDERLPSSATCMNLLKLPTYSSKEVMKSKLLYAIHSKAGFELS 1622
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Match: A0A7R9ZRY8_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRY8_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.720e-38 Identity = 80/135 (59.26%), Postives = 100/135 (74.07%), Query Frame = 3 Query: 3 HELQRLIGGEGG-RAIDVEDLKRNTLYAGGYHQSQPVMEWFWEAIES-FTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQ--RVPEG---EEGRLPSSATCMNLLKLPQYSDRQTLRQKLLYAISANAGFELT 386 +ELQ+LIGG+ R IDV LKR+ YAGGYH SQPV+ FW+ +++ FTP++Q +FLKF+TSCSR PLLGF L P C+Q R+PEG E+ RLP+SATC NLLKLP Y + LR+KLL AI + AGFELT Sbjct: 137 NELQKLIGGDDSIRGIDVAALKRSMQYAGGYHPSQPVVHDFWDLLQNDFTPDQQKKFLKFMTSCSRQPLLGFGSLEPAPCIQQIRLPEGADKEQSRLPTSATCFNLLKLPNYGSKNLLRKKLLAAIESGAGFELT 271 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig65.15181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig65.15181.1 >prot_L-elsbetiae_contig65.15181.1 ID=prot_L-elsbetiae_contig65.15181.1|Name=mRNA_L-elsbetiae_contig65.15181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp MEWFWEAIESFTPEEQGQFLKFVTSCSRPPLLGFDRLNPPICLQRVPEGEback to top mRNA from alignment at L-elsbetiae_contig65:6647..9155+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig65.15181.1 ID=mRNA_L-elsbetiae_contig65.15181.1|Name=mRNA_L-elsbetiae_contig65.15181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2509bp|location=Sequence derived from alignment at L-elsbetiae_contig65:6647..9155+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig65:6647..9155+ >mRNA_L-elsbetiae_contig65.15181.1 ID=mRNA_L-elsbetiae_contig65.15181.1|Name=mRNA_L-elsbetiae_contig65.15181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=558bp|location=Sequence derived from alignment at L-elsbetiae_contig65:6647..9155+ (Laminarionema elsbetiae ELsaHSoW15)back to top |