mRNA_L-elsbetiae_contig6499.15177.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A6H5L234_9PHAE (SpoU_methylase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L234_9PHAE) HSP 1 Score: 384 bits (986), Expect = 2.840e-128 Identity = 204/340 (60.00%), Postives = 229/340 (67.35%), Query Frame = 1 Query: 1 QVVEAVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTLL-EKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSATG---------------DGGAEGT-----HLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDNLDLTIESASSASLEQSTAAGRARQPVVMCASLVDKV 957 ++ E +S WFWPVHGRT+LPPVRQ MEVFAVRMC AYPDLFLT V+KELKDFRLPGQVLCSLLII GHTL+ + G + HRV MF ACLPW+VGTHVMGR+IAQLVCHSVLPE +A DGGA HL ALF FL DNP+M RQLE +TDC ALCTV GMLEAHG G+ G++ P HMCEL K+ MDEIWNEALL DK + LE+G WLQT AAV SG WF+E+ R G + G HIQQKIIPWD LDLT+ SA+SASLEQSTAAGR RQPV+MCASLVDKV Sbjct: 28 KLAETISGWFWPVHGRTALPPVRQHMEVFAVRMCRAYPDLFLTAVVKELKDFRLPGQVLCSLLIITGHTLIGNESGLSARHRVLMFRACLPWVVGTHVMGRLIAQLVCHSVLPEFAAAAXXXXXXXXXXXXXGLDGGATRIVHGEPHLQALFDFLHDNPEM-----RQLEAFGQTDCDALCTVEGMLEAHGTGAAGEITPTHMCELFKETMDEIWNEALL-DKVQVLEDGRAWLQTAAAVDSGAWFEEEGGRAGA-------------GAADGVGEEAGLSLKSGXXXXXDSSHIQQKIIPWDTLDLTVASATSASLEQSTAAGRVRQPVIMCASLVDKV 348
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: D7FX90_ECTSI (SpoU_methylase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX90_ECTSI) HSP 1 Score: 388 bits (997), Expect = 3.860e-120 Identity = 224/338 (66.27%), Postives = 251/338 (74.26%), Query Frame = 1 Query: 1 QVVEAVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTLL-EKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSAT----------GDGGAEGT--------HLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDNLDLTIESASSASLEQSTAAGRARQPVVMCASLVDKV 957 ++ +A+S WFWPVHGRT+LPPVRQ MEVFAVRMC AYPDLFLT V+KELKDFRLPGQVLCSLLIIAGHTLL + G + HRV MF ACLPW+VGTHVMGR+IAQL CHSVLPE +AT G+G G HL ALF FL DNP+M+ MR+RQLE +TDC ALCTV GMLEAHG G+ G++ P HMCEL K+ MDEIWNEAL+ DK + LE+G WLQT AAV SG WF+E XXXXXXXXXXXXXXXXXXXXX HIQQKIIPWD LDLT+ SA+SASLEQSTAAGR RQPVVMCASLVDK+ Sbjct: 1295 KLAKAISEWFWPVHGRTALPPVRQHMEVFAVRMCRAYPDLFLTAVVKELKDFRLPGQVLCSLLIIAGHTLLGNESGLSARHRVPMFRACLPWVVGTHVMGRLIAQLFCHSVLPEFAATASAAXXXXDSGNGVGGGATRIVHGEYHLQALFDFLHDNPEMIKMRRRQLEAFGQTDCEALCTVEGMLEAHGTGAAGEITPTHMCELFKETMDEIWNEALV-DKVQVLEDGRAWLQTAAAVNSGAWFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-------------SSHIQQKIIPWDTLDLTVASATSASLEQSTAAGRVRQPVVMCASLVDKM 1618
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A7S4N1C3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1C3_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.200e-21 Identity = 91/340 (26.76%), Postives = 154/340 (45.29%), Query Frame = 1 Query: 1 QVVEAVSAWFWP-----VHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTLLEKGGS----AGAHRVQMFEA---CLPWMVGTHVMGRVIAQLVCHSVLP-ECSATGDGGAEGT--------HLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDNLDLTIESASSASLEQSTAAGRARQPVVMCASLVDKV 957 ++ EAV+A + +HG+ +R +EVF ++ +P +F +KE++ L Q + SL+I+ G+ ++ + S G V + E CLPW+ T R IAQL+ H ++P TGD E +L ++ FL NP+M +R++Q D + CT G+L+ V + PVH+ + +K+ + ++ E+ + T ++ L A K D+ E G E D+ + Q+KI+P D L+L +E + + S+ AAGRARQ +++CASL+DKV Sbjct: 1125 EIAEAVAARIFESMTMILHGQ-----IRYFIEVFCIQYARTHPAVFGRAYVKEIRRKDLNLQHVSSLMIVGGNLIVGRYASDFMREGTEVVPIHEVLAGCLPWLSSTQGFSRAIAQLLTHKLIPLVVDITGDNMNENEPITANNDWYLRTMYEFLEQNPEMRRLREKQRRFFFAYDAESACTADGLLKI-SVDEGDEADPVHLADAVKRCLKNVFLESQANE-CPTWKKADEQLSQLADQKD----DDVAESGDES-------------------------------SDSPLVNFQRKILPIDALNLAMEESRAESMRN--AAGRARQGLIVCASLIDKV 1420
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: K0T6G3_THAOC (SpoU_methylase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T6G3_THAOC) HSP 1 Score: 103 bits (256), Expect = 1.170e-20 Identity = 90/332 (27.11%), Postives = 150/332 (45.18%), Query Frame = 1 Query: 10 EAVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTLLEK------GGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSAT--------GDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKA--RTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDNLDLTIESASSASLEQSTAAGRARQPVVMCASLVDKV 957 +A SA +HG +R MEVF ++ +PD+F T +I++++ L Q + SLLII G+ + + S LPW+ T R IAQL+CHS++P+ G+ + + L +++ FL +N DM +R++Q + D ++ T+ G+L VG + P H + +K+ + E ++EA ++D + +E+ L A+ E+E G E +A + Q+KI+P D LDL + S S L AAG+ +Q +V+CA+LVDKV Sbjct: 497 KAFSALSNNLHGE-----IRYFMEVFLIQSTRIHPDVFGTRLIEDIQKPSLTLQQVSSLLIIGGNLTIGRYSCDFFRSSKDVRMKGFLVGALPWLSSTQGFSRAIAQLLCHSLIPQVVDVSVELDRDEGNQLKDESVLRSVYTFLEENSDMSRLRKKQEDFFQTYDVDSVTTLGGLLSIP-VGDGEEANPEHKIDAIKECLAETYDEAHVEDAPVWKQMEDLLINADCNQAL------GEEENEGIED--------------------------------EAQLVNFQRKILPIDALDLALRSISEQHLHN--AAGKQKQKLVVCATLVDKV 782
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A2D4CC22_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC22_PYTIN) HSP 1 Score: 80.9 bits (198), Expect = 4.690e-13 Identity = 57/192 (29.69%), Postives = 91/192 (47.40%), Query Frame = 1 Query: 7 VEAVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFL-TGVIKELKDFRLPGQVLCSLLIIAGHTLLEK--GGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPE----CSATGDGGAEGTHLGALFL--------FLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAP 537 +EA SA FW T LP VR MEV +++ + +P L T ++ L+DF L QV SLL++ G ++ S+ A ++ A PW+ +H RV+AQ + +LP + GD G+ + A L FLS+N + M +RQ + A CT+ G+L + + ++ P Sbjct: 1365 LEAFSARFWRAFTSTQLPNVRFYMEVLGMQLALRFPSRTLPTHLLPLLRDFSLTPQVGASLLLVVGVVAHQRLAANSSDAWTDELLVALFPWLNASHGHTRVMAQFLLGMLLPRYLHRVDSDGDRSGSGSRVDAATLASFREIARFLSENKECKRMFRRQAKQFESFSPATQCTMLGLLSSSSLNDVQELFP 1556
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A397A851_9STRA (SpoU_methylase domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A851_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 8.760e-11 Identity = 77/308 (25.00%), Postives = 129/308 (41.88%), Query Frame = 1 Query: 52 SLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTL--LEKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDN--LDLTIESASSASL--EQSTAAGRARQPVVMCASLVDKV 957 +LP +R +E+FA+R+ VA+P + L++ L Q+ SLL++A +L L + H + +PW+ TH R I Q V ++LP A + L +LS N + M +RQ + + + CT+ G+L + ++ P+ + E +K+++ + + L +D+ Q A+V G+ + P S GD +Q+KI P LD + + SL +Q A R QPVV+CASLVDK+ Sbjct: 209 NLPQIRYFIELFAMRVAVAFPKSSFPHIQALLQNVHLMPQLSASLLLVASVSLRLLPVDDTPQLH-LDTLLLMVPWLNSTHGHTRTIVQFVALTLLPYFLAKEATASTVQFLQPTLRYLSTNKECKRMFRRQTDQMATFEPEKECTLAGLLMGT-LNEFDEIVPISIVEQIKESLSASFAQFLKEDRRHGG-------QYQASVAGGLVLPSSAQEAPPPS--------------------SFSSSLEVPVGDDDQVIVQRKIDPNATAFLDELLAQTQAESLRDKQVNARRRRHQPVVVCASLVDKL 487
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: W4GMU9_9STRA (SpoU_methylase domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMU9_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 8.710e-10 Identity = 76/308 (24.68%), Postives = 128/308 (41.56%), Query Frame = 1 Query: 52 SLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTL--LEKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDN--LDLTIESASSASL--EQSTAAGRARQPVVMCASLVDKV 957 +LP +R +E+FA+R+ VA+P + L++ L Q+ SLL++A +L L + H + +PW+ TH R I Q V ++LP A + L +LS N + M +RQ + + + CT+ G+L + ++ P+ + E +K+++ + + L +D+ Q A+V G+ + S GD +Q+KI P LD + + SL +Q A R QPVV+CASLVDK+ Sbjct: 1077 NLPQIRYFIELFAMRVAVAFPKSSFQHIQALLQNVHLMPQLSASLLLVASVSLRLLPVDDTPQLH-LDTLLLMVPWLNSTHGHTRTIVQFVALTLLPYFLAKEATASTVQFLQPTLRYLSTNKECKRMFRRQTDQMATFEPEKECTLAGLLMGT-LNEFDEIVPISIVEQIKESLSASFAQFLKEDRRHGG-------QYQASVAGGLVLPSSAQEA--------------------PPSSSFSSSLEVPVGDDDQVIVQRKIDPNATAFLDELLAQTQAESLRDKQVNARRRRHQPVVVCASLVDKL 1355
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A5D6YAI5_9STRA (SpoU_methylase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAI5_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 8.800e-10 Identity = 81/339 (23.89%), Postives = 135/339 (39.82%), Query Frame = 1 Query: 13 AVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTG-VIKELKDFRLPGQVLCSLLIIAGHTLLEKGGS--AGAHRV--QMFEACLPWMVGTHVMGRVIAQLVCHSVLP--------------ECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKI----IPWDNLDLTIESASSASLEQSTAAGRAR-QPVVMCASLVDKV 957 AV+ FW LP +R +E+FA+R+ + +P + + V+ L DF L QV SLL++A + L + + A H + + A LPW+ H R++ Q + +VLP E T +G + L FLS N + M +RQ + L + + C++ G+L + V ++ P ++ L + + A + ++ Q E S G+ AL ++Q+KI I D L + + + AA ++R QPV++CASLVDKV Sbjct: 1166 AVNERFWRTFAVPHLPALRHYLELFAMRLLLRFPRVTVAQCVVPLLADFNLTPQVGASLLLVAAYALHHRVDAPLASDHDLCALLVRAVLPWLHAAHGHTRILVQFLLATVLPRYLSQLEQPSSQSQEAPPT-EGAVDVAFLRQTARFLSQNKEAKRMHRRQRQQLAKFRPESACSLLGVLSSAAVSDGLELLPS--------------------------DDALAFGEQFKAAMAALFAQFQREHA--------LLAPVAASPPSPLASRSAAGVGAGATPAALSLNVQRKIDRSAILLDESVLPVAMQERGEVVAALAARQSRRQPVILCASLVDKV 1469
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A3L6VX44_9STRA (SpoU_methylase domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VX44_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.060e-9 Identity = 76/310 (24.52%), Postives = 127/310 (40.97%), Query Frame = 1 Query: 52 SLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLII----AGHTLLEKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGHIQQKIIPWDN--LDLTIESASSASL--EQSTAAGRARQPVVMCASLVDKV 957 +LP +R +E+FA+R+ VA+P + L++ L Q+ SLL++ LL + H + +PW+ TH R I Q V ++LP A + L +LS N + M +RQ + + + CT+ G+L + ++ P+ + E +K+++ + + L +D+ Q A+V G+ + P S GD +Q+KI P LD + + SL +Q A R QPVV+CASLVDK+ Sbjct: 535 NLPQIRYFIELFAMRVAVAFPKSSFPHIQALLQNVHLMPQLSASLLLVRVASVSLRLLPVDDTPQLH-LDTLLLMVPWLNSTHGHTRTIVQFVALTLLPYFLAKEATASTVQFLQPTLRYLSTNKECKRMFRRQTDQMATFEPEKECTLAGLLMGT-LNEFDEIVPISIVEQIKESLSASFAQFLKEDRRHGG-------QYQASVAGGLVLPSSAQEAPPPS--------------------SFSSSLEVPVGDDDQVIVQRKIDPNATAFLDELLAQTQAESLRDKQVNARRRRHQPVVVCASLVDKL 815
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Match: A0A024UUB9_9STRA (SpoU_methylase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUB9_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.790e-9 Identity = 78/327 (23.85%), Postives = 134/327 (40.98%), Query Frame = 1 Query: 7 VEAVSAWFWPVHGRT-SLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKDFRLPGQVLCSLLIIAGHTL--LEKGGSAGAHRVQMFEACLPWMVGTHVMGRVIAQLVCHSVLPECSATGDGGAEGTHLGALFLFLSDNPDMVNMRQRQLEILNRTDCAALCTVRGMLEAHGVGSTGDVAPVHMCELLKKAMDEIWNEALLQDKARTLEEGLGWLQTTAAVKSGVWFDEQEERGGEPXXXXXXXXXXXXXXXXXXXXXSXXXXXXGSCGDALDGH---IQQKIIPWDNL---DLTIESASSASLEQSTAAGRAR-QPVVMCASLVDKV 957 V+A+ FW +LP +R +E+FA+R+ VA+P V K L + L Q+ SLL++A +L L + H + +PW+ TH R I Q V ++LP + + L +LS N + M +RQ + + CT+ G+L + ++ PV + E +K+++ + + L +D+ G Q+T A ++ + DA H +Q+KI P +L ++ + +Q A R R QPV++CASL+DK+ Sbjct: 1053 VDAIHDLFWHKSFLNHNLPQIRYFIELFAMRVAVAFPTSSFPHVQKLLGNVHLMPQLSASLLLVASVSLRLLPVDDTPQLH-LDTLLLMVPWLNSTHGHTRTIVQFVALTLLPYFLSHEATASRVAFLQPTLRYLSTNKECKRMFRRQTDQMASFQPEKECTLAGLLGGT-LNEFDEIVPVSIVEQIKESLSASFAQFLKEDRHHG-----GQYQSTVAGSLQLFPSVTSSQD------------------------DVALPTAAGTNDASVSHDQIVQRKIDPNATAFLDELLAQTQAETLRDQQVNARRQRHQPVIVCASLIDKI 1348 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6499.15177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6499.15177.1 >prot_L-elsbetiae_contig6499.15177.1 ID=prot_L-elsbetiae_contig6499.15177.1|Name=mRNA_L-elsbetiae_contig6499.15177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=319bp QVVEAVSAWFWPVHGRTSLPPVRQLMEVFAVRMCVAYPDLFLTGVIKELKback to top mRNA from alignment at L-elsbetiae_contig6499:283..5399+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6499.15177.1 ID=mRNA_L-elsbetiae_contig6499.15177.1|Name=mRNA_L-elsbetiae_contig6499.15177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5117bp|location=Sequence derived from alignment at L-elsbetiae_contig6499:283..5399+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6499:283..5399+ >mRNA_L-elsbetiae_contig6499.15177.1 ID=mRNA_L-elsbetiae_contig6499.15177.1|Name=mRNA_L-elsbetiae_contig6499.15177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1914bp|location=Sequence derived from alignment at L-elsbetiae_contig6499:283..5399+ (Laminarionema elsbetiae ELsaHSoW15)back to top |