mRNA_L-elsbetiae_contig649.15170.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI) HSP 1 Score: 377 bits (969), Expect = 2.440e-126 Identity = 192/276 (69.57%), Postives = 229/276 (82.97%), Query Frame = 1 Query: 1 MTESSLSQGDGGYGYS--SSQAAQAALYAEQFSLKCDAGFIVVGLQDGEAVATPVRVIATLVTISVASAWFSRRKSIKKLLLFFGHWLAGLLHQLAYMAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKRE 822 MT SSL GGYG + SSQAAQAALYAE FSLKC+AGF VVGLQ+GEAV TP+RVI+TL+T+SVASAWFSRRKSIKKLLLFF HWL+GLLHQL +M EATM+SVCW GD L LIKT KF ELA+ +MLAITNLAICVNLAL+VMSHRTL+RV+S S+P+L+ +FLALS+G AA +VPFW V+SGT FWV ++++ WI V+ F+VEFFVGICM IV WL++FR+ E+K+ WK+H RIRYYFGLT+I T VNLALGICGTIY + D +E Sbjct: 1 MTSSSL----GGYGSTEYSSQAAQAALYAEMFSLKCNAGFFVVGLQEGEAVCTPIRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDMKE 272
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI) HSP 1 Score: 321 bits (822), Expect = 2.500e-103 Identity = 157/279 (56.27%), Postives = 207/279 (74.19%), Query Frame = 1 Query: 94 LKCDAGFIVVGLQDGEAVATPVRVIATLVTISVASAWFSRRKSIKKLLLFFGHWLAGLLHQLAYMAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLGARNVDERAG 930 L C+ GF +GLQ+GE TP+RV++TLV++SV SAW S K +K+L LFF HWL+GL+ L ++ E M++VCWT L G IK KF+E S +M+AIT+LAICVNLAL+V SHRTLTRV+SVSSP L+ L LA+S+G + VP W+ + GTGFW+ ++D+ + VSIF++EF VGICMF I+AWLLLFR KEVKECW++ RIRYYF LT++GTAVN+ +GIC T++ I D E L + +W RY+HVALDT VLYGVL +++DER G Sbjct: 5 LSCETGFTAIGLQEGEDKITPIRVLSTLVSVSVVSAWCSWTK-VKRLSLFFAHWLSGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDERGG 282
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE) HSP 1 Score: 293 bits (749), Expect = 5.040e-93 Identity = 163/279 (58.42%), Postives = 199/279 (71.33%), Query Frame = 1 Query: 286 MAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLGARNVDERAGSPSSTTVAAGSSG----SQGRPAPAPAAPAKRSRFSNNPGLREWSGLSKRSSSSSHGHVSFSSG 1110 M + TMISVCW G+ L G IK K+LE S +MLAITNLAIC+NLALVV SHRTL+RV SVS+P+L+ LFLA+SV AAA +VPFW TV+SGT FWV + D+ ++ WI VSI +EF VGICMF IV+WL+ FR + +KECWKLH RIRYYF LT+IGTAVNLALGI G Y R + L+ +TWAFRY HVALDTIVLYGVLG R++DE GS +ST+ SSG S G P P SN+ G+++ SGLS SS++S G V + G Sbjct: 3 MTQGTMISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDEGGGSAASTSGT--SSGRLPASSGLPRP-----------SNHRGMKKQSGLSNTSSTASGGAVCSTQG 268
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI) HSP 1 Score: 281 bits (719), Expect = 2.730e-88 Identity = 133/201 (66.17%), Postives = 160/201 (79.60%), Query Frame = 1 Query: 301 MISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLG 903 M+ VCW G ++ G +K KFLEL + +MLAITNLAIC NLALV+MSHRTL RVKS SSPSL+FL LA+S+ A A PFW TV+SGTGF V + D+ W+AVS F++EF VGICMF IVAWLLLFR EVKECWK+H RIRYYFGLT+IGT VNLALG+CGTIY + + + LL+V+TW FR++H+ALDT VLYGVLG Sbjct: 1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVLG 201
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI) HSP 1 Score: 268 bits (685), Expect = 2.100e-83 Identity = 123/223 (55.16%), Postives = 169/223 (75.78%), Query Frame = 1 Query: 262 GLLHQLAYMAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLGARNVDERAG 930 G++ L ++ E M++VCW G +L LIKT KF+ELAS HMLA+T+LAICVNLAL+V SHRTL RV+SVSSP L+ L LA+S+G A VP W+ ++ GT FW+ ++D+ + + VSIF++EF VG+CMF IVAWLLLFR KEVKECW++H RIRYY LT++GT ++L++GIC T++ + ++ L + W FRY+H+ALDT VLYGVL +++DER G Sbjct: 11 GIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDERVG 233
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI) HSP 1 Score: 258 bits (659), Expect = 4.020e-80 Identity = 128/212 (60.38%), Postives = 159/212 (75.00%), Query Frame = 1 Query: 301 MISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLGARNVDERAGSP 936 MISVCW G++LA IKT KFLEL + +MLAITNLAICVNL+L+VMS R + VKS+S+ L+ LFLALS G AA AVPFW TV+SGTGFW ++ ++ +S F VEF VGICMF IV+WLLLFR E+KECW +H +RYYFGLT++GT NL LG+CGTIY I D LL++ +W FR V +ALDTIVL+ VL ++VDERA +P Sbjct: 1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAETP 212
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE) HSP 1 Score: 246 bits (629), Expect = 5.000e-75 Identity = 118/223 (52.91%), Postives = 157/223 (70.40%), Query Frame = 1 Query: 259 AGLLHQLAYMAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKREQLLVVITWAFRYVHVALDTIVLYGVLGARNVDERA 927 +G L LA M E M+S C+ +L GLIKT F+ + S +MLA TNL IC+NLAL+V SHRT+TRVK+VSSP ++F+ L +S AA VP W+ TV+ GT FW ++D ++ +I +SI+ +EF VGICM IV WL +FR E+KECW+ H RIRYYF LT+ GTAVNL LGICG Y D++E L + +W FRY+H++ DT+VLYG L ++DERA Sbjct: 9 SGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDERA 231
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI) HSP 1 Score: 234 bits (596), Expect = 1.520e-71 Identity = 117/178 (65.73%), Postives = 141/178 (79.21%), Query Frame = 1 Query: 292 EATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTR-VKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKRE 822 +ATMISVCWTG +L LIKTFKFLELAS +MLA+TNLAIC+NLALVVMSH V S+SSP L+ + L +S+GAAA A PFW++ ++SGTGF+ + ++ S WI +S FY+EFFVGICMF IVAWLLLFR E+KECWK+H RIRYYFGLT+I T VNL LGICG IY I D+ E Sbjct: 2 QATMISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLIGDREE 179
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI) HSP 1 Score: 229 bits (584), Expect = 7.990e-70 Identity = 113/172 (65.70%), Postives = 135/172 (78.49%), Query Frame = 1 Query: 301 MISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTRVKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDK 816 MISVCW G+ L G IK K+LE S +MLAITNLAIC+NLALVV SHRTL+RVKSVS+P+L+ LFLA+SV AAA +VPFW TV+SGT FWV + D+ ++ WI VSI +EF VGICMF IV+WL+ FR + +KECWK+H RIRYYF LT+I TAVNLALGI G Y RD Sbjct: 1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVFRDN 172
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Match: A0A6H5JZY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY2_9PHAE) HSP 1 Score: 225 bits (574), Expect = 2.290e-67 Identity = 123/236 (52.12%), Postives = 146/236 (61.86%), Query Frame = 1 Query: 250 HWLAGLLHQLAYMAEATMISVCWTGDHLAGLIKTFKFLELASGHMLAITNLAICVNLALVVMSHRTLTR---------------------------------------------VKSVSSPSLMFLFLALSVGAAAGAVPFWDYTVISGTGFWVASNDEHRSRWIAVSIFYVEFFVGICMFAIVAWLLLFRKKEVKECWKLHVRIRYYFGLTIIGTAVNLALGICGTIYTIRDKRE 822 H+ GLL+QL + +ATMISVCW G +L LIKTFKFLELAS +MLA TNLAIC+NLALVVMS V S+SSP L+ + L +S+GAAA A PFWD+ ++SGTGF+ + ++ S WI VS FY+EFFVGICMF IVAWLLLFR E+KECWK H RIRYYFGLT+I T VNL LGICG IY I D+ E Sbjct: 7 HFSCGLLYQLLILMQATMISVCWAGANLIKLIKTFKFLELASVNMLATTNLAICINLALVVMSESINNTSPSAPHGICSLLPLSGTSVCGLLSLVLPTVGDTAQLQSHGDQQPGVNSLSSPLLIMVSLVISIGAAAAAAPFWDFIILSGTGFFPETENQRGSDWITVSRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKTHARIRYYFGLTLIATGVNLILGICGVIYLIGDREE 242 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig649.15170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig649.15170.1 >prot_L-elsbetiae_contig649.15170.1 ID=prot_L-elsbetiae_contig649.15170.1|Name=mRNA_L-elsbetiae_contig649.15170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=399bp MTESSLSQGDGGYGYSSSQAAQAALYAEQFSLKCDAGFIVVGLQDGEAVAback to top mRNA from alignment at L-elsbetiae_contig649:25218..32584+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig649.15170.1 ID=mRNA_L-elsbetiae_contig649.15170.1|Name=mRNA_L-elsbetiae_contig649.15170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7367bp|location=Sequence derived from alignment at L-elsbetiae_contig649:25218..32584+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig649:25218..32584+ >mRNA_L-elsbetiae_contig649.15170.1 ID=mRNA_L-elsbetiae_contig649.15170.1|Name=mRNA_L-elsbetiae_contig649.15170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2394bp|location=Sequence derived from alignment at L-elsbetiae_contig649:25218..32584+ (Laminarionema elsbetiae ELsaHSoW15)back to top |