mRNA_L-elsbetiae_contig649.15169.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig649.15169.1
Unique NamemRNA_L-elsbetiae_contig649.15169.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: D8LNM3_ECTSI (Phosphoribosylaminoimidazole carboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM3_ECTSI)

HSP 1 Score: 416 bits (1069), Expect = 2.910e-141
Identity = 240/312 (76.92%), Postives = 253/312 (81.09%), Query Frame = 3
Query:  375 AGDLTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGS----------------------SPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSGKAA 1244
            AGDL +LL RVAAGDLSPA AAS+L+PLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSA+QI  IL AMIRE+R      AEA +                      SP+VATRVSPEKW +IS  LPGQL YHADARIVSFG PP      AAG G   G    A S++IG VA+LSAGTSDLA+AEEAAVLAELAGAEVSRFHDVGVAGIHRLL AIPSV+KAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS K A
Sbjct:   17 AGDLPALLARVAAGDLSPATAASQLAPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSAEQITDILAAMIREARAGSRVAAEAAAVHXXXXXXXXXXXXXXXXXXXXSPVVATRVSPEKWLVISDALPGQLTYHADARIVSFGEPPQRR--RAAGDGAPGG--SIATSISIGTVAVLSAGTSDLAVAEEAAVLAELAGAEVSRFHDVGVAGIHRLLGAIPSVQKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSKVA 324          
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A835ZD94_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD94_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.960e-75
Identity = 151/291 (51.89%), Postives = 182/291 (62.54%), Query Frame = 3
Query:  420 LSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGG---------------EEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSF-GAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSGKAA 1244
            + PA A  +L PLL         +G FAKIDH R  R GFPEVV+G+GK+ +QI HI+  MIR  +                          +P VA+R+   KWS +   + G L Y+ DAR+  + G+ P  AGS                   +G VA++ AGTSD+AIAEE AVL EL GA V R +DVGVAGIHRL AA+P V  A  A+C+AGMDGAMP VVAGLV+CPVVAVPTSVGYGAA  G+APLLTMLNACAPGV+VVNIDNGFGAAA AVK+L+   AA
Sbjct:    1 MGPAAAVEQLEPLLT-----IAHIGDFAKIDHHRTIRTGFPEVVYGEGKTPEQIRHIMEVMIRHRKSHSXXXXXXXXXXXXXXXXSSGSVDHAPAVASRICSAKWSHLQH-IDG-LQYYRDARLAVYHGSAPPAAGS-------------------LGTVAVMCAGTSDVAIAEETAVLLELCGAAVERVYDVGVAGIHRLFAALPRVRAAHCAVCIAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAPLLTMLNACAPGVAVVNIDNGFGAAAMAVKILRMRHAA 265          
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A846GFF1_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=24 Tax=Moorena TaxID=1155738 RepID=A0A846GFF1_9CYAN)

HSP 1 Score: 226 bits (575), Expect = 1.140e-67
Identity = 143/285 (50.18%), Postives = 184/285 (64.56%), Query Frame = 3
Query:  384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIV-ATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSG 1235
            L SLL+ VAAGDLSP VA  KL           E+VG FAKIDH R  R GFPEV++G+GK+ DQI  I+  M +++             P+V ATR++PE  + +   +P +L Y++ ARI +  AP  L   E   AG+               ++++SAGTSDL +A+EAAV AEL G +V R  DVGVAGIHRLL     + +A V I VAGM+GA+P VVAG+  CPV+AVPTSVGYGA+  G+APLLTMLN+CAPG+ VVNIDNGFGAA  A K+L++G
Sbjct:    7 LKSLLEAVAAGDLSPTVALDKLKDFTY------EEVGDFAKIDHHRTLRTGFPEVIWGEGKTPDQIAQIMAVMRQQN-------------PVVMATRITPEVATELESKVP-ELQYYSTARICAI-APSQL---EPKYAGI---------------ISLISAGTSDLPVAQEAAVTAELCGFQVKRLWDVGVAGIHRLLNNRQVIAEADVLIVVAGMEGALPSVVAGMADCPVIAVPTSVGYGASFGGMAPLLTMLNSCAPGIGVVNIDNGFGAAVLAGKILRTG 252          
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: K9VM32_9CYAN (1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=13 Tax=Cyanobacteria TaxID=1117 RepID=K9VM32_9CYAN)

HSP 1 Score: 222 bits (566), Expect = 3.120e-66
Identity = 143/300 (47.67%), Postives = 180/300 (60.00%), Query Frame = 3
Query:  384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSGKAAXXXXXATRGGDGD 1283
            L  LL+ VAAGD+SP  A  KL           E VG FAKIDH R  R GFPEV++G GK+ DQIV I+ AM               +S ++ATR+ PE +  + + +P  L Y+  ARI +  A                  SP+ +  + G V I+SAGT+DLA+AEEAAV AEL G +V R  DVGVAGIHRLL+    +  A V I VAGM+GA+  VVAGL  CPV+AVPTSVGYGA+  G+APLLTMLN+CA GV VVNIDNGFGAA  A ++L+S           +G +G+
Sbjct:    6 LQKLLESVAAGDISPIAALDKLKHF------DFEQVGDFAKIDHHRTLRTGFPEVIWGPGKTPDQIVEIIEAM------------RGRNSAVMATRIEPEVFEQLQQKIP-DLCYYQKARICAISAN-----------------SPTPQ--HPGTVTIISAGTADLAVAEEAAVTAELCGFQVRRLWDVGVAGIHRLLSNRHVIVGADVLIAVAGMEGALASVVAGLADCPVIAVPTSVGYGASFGGIAPLLTMLNSCAAGVGVVNIDNGFGAAILACQILRSAGKVKRRGEGEKGREGE 267          
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: UPI00187FF609 (Nickel pincer cofactor biosynthesis protein LarB n=2 Tax=Gloeocapsopsis crepidinum TaxID=693223 RepID=UPI00187FF609)

HSP 1 Score: 220 bits (560), Expect = 1.360e-65
Identity = 140/283 (49.47%), Postives = 178/283 (62.90%), Query Frame = 3
Query:  384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS 1232
            L SLL+ VAAG+++PA A  KL  L        E VG FA++DH RR R GFPEV++G GK+ DQI  I+ AM    R  G        S ++ATR+ PE ++ +   +P  L Y+A ARI +                    ++P+      G + ILSAGT+DL +AEEAA+ AEL+G  V R  DVGVAGIHRLL     +E A V I VAGM+GA+P VVAGL  CPV+AVPTS+GYGA+  GLAPLLTMLN+CA GV VVNIDNGFGAA  A ++L++
Sbjct:    7 LRSLLESVAAGEVNPAEALDKLKHL------NYEPVGDFARVDHHRRLRTGFPEVIWGLGKTPDQIAQIMMAM----RDRG--------SVVMATRIEPEVYAQLQEKVPN-LHYYAMARICA--------------------IAPTIEPQYSGTIGILSAGTADLPVAEEAAMTAELSGFRVQRLWDVGVAGIHRLLNNRHVIESADVLIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGASFGGLAPLLTMLNSCAAGVGVVNIDNGFGAAVLAGQILRT 250          
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A6H1U2A2_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1U2A2_9CYAN)

HSP 1 Score: 219 bits (557), Expect = 3.800e-65
Identity = 139/285 (48.77%), Postives = 179/285 (62.81%), Query Frame = 3
Query:  384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIV-ATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSG 1235
            L SLL+ VA+G+L P  A  +L  L        E VGGFA IDH R  R GFPEV++G GK+ DQI  I+  M + +             P+V ATR++PE +  +   + G L Y+ +ARI + G P                V P+      GK+ ++ AGT+DL +AEEAAV A+L G +V RF D+GVAGIHRLLA   ++    VAI VAGM+GA+P VVAGLV CP +AVPTSVGYGA+ +GLAPLLTMLN+CA GV VVNIDNGFGAA  A ++L++G
Sbjct:    6 LQSLLEAVASGNLPPEKALEELKHLAF------EPVGGFAHIDHHRNLRTGFPEVIWGPGKTPDQIAEIMEVMRQRN-------------PVVMATRIAPEVYDQLQERVKG-LFYYREARICTLGLP---------------AVEPTYP----GKMGVICAGTADLPVAEEAAVTAQLCGFDVCRFWDIGVAGIHRLLAHREAIAACDVAIVVAGMEGALPSVVAGLVSCPTIAVPTSVGYGASFNGLAPLLTMLNSCAAGVGVVNIDNGFGAAILAGQILRTG 251          
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A352AAW6_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352AAW6_9CYAN)

HSP 1 Score: 219 bits (558), Expect = 4.860e-65
Identity = 140/283 (49.47%), Postives = 178/283 (62.90%), Query Frame = 3
Query:  384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS 1232
            L SLL+ VAAG +SP VA  KL           E VG FAKIDH R  R GFPEV++G GK+ DQI  I+ AM               +  ++ATR+ PE ++ +   +PG L Y+  A+I +  AP ++A   A                  G +A++ AGTSDL +AEEAAV AEL G +V R  DVGVAGIHRLL+    + +A VAI VAGM+GA+P VVAGL  CPV+AVPTS+GYGA+  GLAPLLTMLN+CAPGV VVNIDNGFGAA  A +++++
Sbjct:    7 LQSLLEAVAAGHVSPDVALEKLKNFAF------ESVGDFAKIDHHRTLRTGFPEVIWGLGKTPDQIAQIMEAM------------RLRNPLVMATRIVPEVFTQLQDKVPG-LKYYPTAQICAV-APDAIAPKYA------------------GTIALICAGTSDLPVAEEAAVTAELCGFQVQRLWDVGVAGIHRLLSHREMIAEADVAIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGASFGGLAPLLTMLNSCAPGVGVVNIDNGFGAAILAGQIIRT 251          
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A3C0N4P5_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A3C0N4P5_9CYAN)

HSP 1 Score: 219 bits (557), Expect = 4.880e-65
Identity = 139/283 (49.12%), Postives = 179/283 (63.25%), Query Frame = 3
Query:  384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS 1232
            L SLL+ VAAG++ PAVA  KL  L        E VG FA+IDH RR R GFPEV++G GK+ DQI  I+  M         + A     PI+ATR+ P+ ++ +   +PG + Y+  ARI +   P +L   E   +G+               ++++ AGTSDL +AEEAA+ AEL G +V R  DVGVAGIHRLL     + +A V I +AGM+GA+P VVAGL  CPV+AVPTSVGYGA  SGLAPLLTMLN+CA GV VVNIDNGFGAA  A ++L++
Sbjct:    7 LQSLLEAVAAGEVKPAVALEKLKHLAY------ETVGDFARIDHHRRLRTGFPEVIWGPGKTPDQIAQIMEVM--------RDAAAPDIVPIMATRIEPDVFAKLQEKVPG-IQYYPTARICAI-TPKTL---EPTYSGI---------------ISLICAGTSDLPVAEEAAITAELCGFQVRRLWDVGVAGIHRLLNNRQVIAEANVLIVIAGMEGALPSVVAGLADCPVIAVPTSVGYGANFSGLAPLLTMLNSCAAGVGVVNIDNGFGAAILAGQILRT 255          
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: K9XDQ8_9CHRO (1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=7 Tax=Cyanobacteria TaxID=1117 RepID=K9XDQ8_9CHRO)

HSP 1 Score: 218 bits (555), Expect = 1.030e-64
Identity = 142/283 (50.18%), Postives = 177/283 (62.54%), Query Frame = 3
Query:  384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS 1232
            L SLL+ VAAG+++P  A  KL  L        E VG FA+IDH RR R GFPEV++G GK+ DQI  I+ AM    R  G        S ++ATR+ PE ++ +   +P  L Y+A ARI +                +   + P       G ++ILSAGT+DL +AEEAAV AEL+G  V R  DVGVAGIHRLL     VE A V I VAGM+GA+P VVAGL  CPV+AVPTS+GYGA+  GLAPLLTMLN+CA GV VVNIDNGFGAA  A ++L++
Sbjct:   14 LRSLLESVAAGEVNPVEAFDKLKHL------NYEPVGDFARIDHHRRLRTGFPEVIWGPGKTPDQIAQIMHAM----RDRG--------SVVMATRIEPEVYAQLQEKVP-DLYYYAMARICA----------------ITTAIEPQCP----GVISILSAGTADLPVAEEAAVTAELSGFRVHRLWDVGVAGIHRLLNNRHVVESADVLIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGASFGGLAPLLTMLNSCAAGVGVVNIDNGFGAAVLAGQILRA 257          
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Match: A0A8J6STK9_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=4 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J6STK9_9CYAN)

HSP 1 Score: 218 bits (554), Expect = 1.280e-64
Identity = 142/284 (50.00%), Postives = 183/284 (64.44%), Query Frame = 3
Query:  384 LTSLLDRVAAGDLSPAVAASKLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSADQIVHILTAMIRESRQAGGEEAEAGSSPIV-ATRVSPEKWSIISRDLPGQLAYHADARIVSFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEAAVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKS 1232
            L +LL+ VA G++SP  A  KL           E V  FAKIDH R  R GFPEV++G GK+ +QI HI+TAM + +             P+V ATR++PE +  +   +PG L Y   ARI +      L  S AA     DG  P  +  + G +++LSAGT+DLA+AEEAAV AEL+G  V+R  DVGVAGIHRLL+    +++A V I VAGM+GA+P VVAGL  CPV+AVPTS+GYGA   GLAPLLTMLN+CA G+ VVNIDNGFGAA  A ++L++
Sbjct:    7 LQNLLNAVALGEISPENALDKLKHF------DFEPVADFAKIDHHRSLRTGFPEVIWGPGKTPEQIAHIMTAMRQRN-------------PVVMATRITPEVYEKLQPQVPG-LRYFELARICA------LVQSSAA-----DGEMPEVQ--HEGAISLLSAGTADLAVAEEAAVTAELSGFRVNRLWDVGVAGIHRLLSNRQVIQEADVLIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGANFGGLAPLLTMLNSCAAGIGVVNIDNGFGAAILAGQILRT 257          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig649.15169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNM3_ECTSI2.910e-14176.92Phosphoribosylaminoimidazole carboxylase n=2 Tax=E... [more]
A0A835ZD94_9STRA1.960e-7551.89Phosphoribosylaminoimidazole carboxylase n=1 Tax=T... [more]
A0A846GFF1_9CYAN1.140e-6750.18Nickel pincer cofactor biosynthesis protein LarB n... [more]
K9VM32_9CYAN3.120e-6647.671-(5-phosphoribosyl)-5-amino-4-imidazole-carboxyla... [more]
UPI00187FF6091.360e-6549.47Nickel pincer cofactor biosynthesis protein LarB n... [more]
A0A6H1U2A2_9CYAN3.800e-6548.77Nickel pincer cofactor biosynthesis protein LarB n... [more]
A0A352AAW6_9CYAN4.860e-6549.47Nickel pincer cofactor biosynthesis protein LarB n... [more]
A0A3C0N4P5_9CYAN4.880e-6549.12Nickel pincer cofactor biosynthesis protein LarB n... [more]
K9XDQ8_9CHRO1.030e-6450.181-(5-phosphoribosyl)-5-amino-4-imidazole-carboxyla... [more]
A0A8J6STK9_9CYAN1.280e-6450.00Nickel pincer cofactor biosynthesis protein LarB n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig649contigL-elsbetiae_contig649:22419..23976 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score294.3
Seed ortholog evalue5e-77
Seed eggNOG ortholog2880.D8LNM3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.AIR carboxylase
EggNOG OGs2S0IG@2759,COG1691@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionNCAIR mutase (PurE)-related proteins
Ec32 orthologEc-08_006600.1
Exons2
Model size1333
Cds size690
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig649.15169.1prot_L-elsbetiae_contig649.15169.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig649 22463..23377 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816716.2120547-UTR-L-elsbetiae_contig649:22418..224621622816716.2120547-UTR-L-elsbetiae_contig649:22418..22462Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig649 22419..22462 -
1691683761.1936607-UTR-L-elsbetiae_contig649:22418..224621691683761.1936607-UTR-L-elsbetiae_contig649:22418..22462Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig649 22419..22462 -
1622816716.2455547-UTR-L-elsbetiae_contig649:23377..239761622816716.2455547-UTR-L-elsbetiae_contig649:23377..23976Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig649 23378..23976 -
1691683761.230421-UTR-L-elsbetiae_contig649:23377..239761691683761.230421-UTR-L-elsbetiae_contig649:23377..23976Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig649 23378..23976 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816716.2229831-CDS-L-elsbetiae_contig649:22462..228221622816716.2229831-CDS-L-elsbetiae_contig649:22462..22822Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 22463..22822 -
1691683761.20457-CDS-L-elsbetiae_contig649:22462..228221691683761.20457-CDS-L-elsbetiae_contig649:22462..22822Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 22463..22822 -
1622816716.2351305-CDS-L-elsbetiae_contig649:23047..233771622816716.2351305-CDS-L-elsbetiae_contig649:23047..23377Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 23048..23377 -
1691683761.218204-CDS-L-elsbetiae_contig649:23047..233771691683761.218204-CDS-L-elsbetiae_contig649:23047..23377Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig649 23048..23377 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig649.15169.1

>prot_L-elsbetiae_contig649.15169.1 ID=prot_L-elsbetiae_contig649.15169.1|Name=mRNA_L-elsbetiae_contig649.15169.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp
MIRESRQAGGEEAEAGSSPIVATRVSPEKWSIISRDLPGQLAYHADARIV
SFGAPPSLAGSEAAGAGVRDGVSPSARSLNIGKVAILSAGTSDLAIAEEA
AVLAELAGAEVSRFHDVGVAGIHRLLAAIPSVEKAGVAICVAGMDGAMPG
VVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFG
AAAFAVKLLKSGKAAAAAAAATRGGDGDA*
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mRNA from alignment at L-elsbetiae_contig649:22419..23976-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig649.15169.1 ID=mRNA_L-elsbetiae_contig649.15169.1|Name=mRNA_L-elsbetiae_contig649.15169.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1558bp|location=Sequence derived from alignment at L-elsbetiae_contig649:22419..23976- (Laminarionema elsbetiae ELsaHSoW15)
CTCCTTCCGTCGGTGCACAATGGGCCACTACCACCGTGTGCTTGCATTCA GCAGGCACTGGTTCCCTGCTGGAAAATTGGTGGGCCAGAGTTGAGAGCTT TTTGTTTGTTCGTCGACAGCGTGAGTGCAAGTGAACTACGTGTTCCACGA GCGGATGATCAAGAGCTGTACTGGTTAGAGACAGAGGGGGGAGCTTAGGC ATCGCGTTTAACTCTACCCTTCGGACGACCATGGTATTTTCTTCTGGCTC CAACGCATCCAGGATTGATTGTTCAGCTGCTGGCTCTCTAAGCTAAGCCA AGTATTGTTGCCTCGTCCTCGTTTGCGTGTTGCAGGCTAGAAGAAGTTCA TCTTCGTCCACAGCAGCAGCAGCAGCAGGCGATCTGACGTCCTTGCTAGA CAGAGTCGCTGCTGGCGACCTCTCTCCTGCCGTGGCAGCATCCAAGCTAT CCCCTCTGCTCGTCTCCGGAGGAGCCCAGGCAGAGGATGTGGGCGGGTTC GCGAAAATCGATCATGACAGGCGGCGAAGGGTCGGCTTCCCGGAGGTTGT CTTCGGTGACGGCAAGTCGGCCGACCAGATCGTTCACATCCTGACGGCCA TGATTCGAGAGTCGAGACAAGCGGGCGGCGAGGAAGCTGAAGCTGGCTCG AGCCCAATCGTGGCGACGAGGGTATCTCCGGAGAAATGGTCGATCATCTC GCGGGATCTTCCCGGGCAGCTGGCGTACCACGCGGACGCTCGTATCGTGT CGTTTGGCGCACCGCCGTCGCTGGCAGGGAGCGAAGCAGCGGGAGCAGGG GTCCGGGACGGCGTGAGTCCGAGCGCTCGTAGTTTGAATATTGGAAAGGT GGCGATCTTGAGCGCAGGAACGTCGGACCTGGCAATCGCAGAAGAGGCGG CCGTGTTGGCAGAGCTGGCCGGCGCAGAGGTGAGAGCGATAACCGCAAGG CTACCAAAACATCATGGGTTTACGACATGGTTGTGTTCTGACTTGATCTC TTCGCGTGCACCTCCTGCCCGGGTGTAATCCCCTAGCCTCTCGCCGACCC CCGCCCCGGACTGAACTCGTGCTTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCGTTGCCCCTCTTGACCCGTGCTGACCTCGCGACACGTGGCGGACGAA CCAGGTTTCCCGCTTCCATGATGTGGGCGTGGCGGGCATACACCGCCTCC TGGCCGCAATTCCTTCCGTAGAGAAAGCCGGCGTTGCTATTTGCGTGGCG GGAATGGACGGCGCCATGCCGGGGGTAGTGGCCGGGCTGGTCAAGTGCCC GGTCGTCGCCGTGCCCACGAGCGTGGGGTACGGGGCGGCGATGTCGGGCC TGGCGCCCTTGCTAACCATGCTGAACGCGTGCGCCCCCGGAGTGTCGGTC GTGAACATTGACAACGGCTTCGGGGCCGCAGCGTTTGCCGTCAAGCTGCT CAAGAGCGGCAAGGCCGCCGCTGCCGCCGCCGCCGCGACACGAGGGGGTG ACGGGGATGCTTAGATTTGTTTTGATTGTTGATGGTGTTGAAGTCTGAAG GGAGAGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig649:22419..23976-

>mRNA_L-elsbetiae_contig649.15169.1 ID=mRNA_L-elsbetiae_contig649.15169.1|Name=mRNA_L-elsbetiae_contig649.15169.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1380bp|location=Sequence derived from alignment at L-elsbetiae_contig649:22419..23976- (Laminarionema elsbetiae ELsaHSoW15)
ATGATTCGAGAGTCGAGACAAGCGGGCGGCGAGGAAGCTGAAGCTGGCTC
GAGCCCAATCGTGGCGACGAGGGTATCTCCGGAGAAATGGTCGATCATCT
CGCGGGATCTTCCCGGGCAGCTGGCGTACCACGCGGACGCTCGTATCGTG
TCGTTTGGCGCACCGCCGTCGCTGGCAGGGAGCGAAGCAGCGGGAGCAGG
GGTCCGGGACGGCGTGAGTCCGAGCGCTCGTAGTTTGAATATTGGAAAGG
TGGCGATCTTGAGCGCAGGAACGTCGGACCTGGCAATCGCAGAAGAGGCG
GCCGTGTTGGCAGAGCTGGCCGGCGCAGAGATGATTCGAGAGTCGAGACA
AGCGGGCGGCGAGGAAGCTGAAGCTGGCTCGAGCCCAATCGTGGCGACGA
GGGTATCTCCGGAGAAATGGTCGATCATCTCGCGGGATCTTCCCGGGCAG
CTGGCGTACCACGCGGACGCTCGTATCGTGTCGTTTGGCGCACCGCCGTC
GCTGGCAGGGAGCGAAGCAGCGGGAGCAGGGGTCCGGGACGGCGTGAGTC
CGAGCGCTCGTAGTTTGAATATTGGAAAGGTGGCGATCTTGAGCGCAGGA
ACGTCGGACCTGGCAATCGCAGAAGAGGCGGCCGTGTTGGCAGAGCTGGC
CGGCGCAGAGGTTTCCCGCTTCCATGATGTGGGCGTGGCGGGCATACACC
GCCTCCTGGCCGCAATTCCTTCCGTAGAGAAAGCCGGCGTTGCTATTTGC
GTGGCGGGAATGGACGGCGCCATGCCGGGGGTAGTGGCCGGGCTGGTCAA
GTGCCCGGTCGTCGCCGTGCCCACGAGCGTGGGGTACGGGGCGGCGATGT
CGGGCCTGGCGCCCTTGCTAACCATGCTGAACGCGTGCGCCCCCGGAGTG
TCGGTCGTGAACATTGACAACGGCTTCGGGGCCGCAGCGTTTGCCGTCAA
GCTGCTCAAGAGCGGCAAGGCCGCCGCTGCCGCCGCCGCCGCGACACGAG
GGGGTGACGGGGATGCTTAGGTTTCCCGCTTCCATGATGTGGGCGTGGCG
GGCATACACCGCCTCCTGGCCGCAATTCCTTCCGTAGAGAAAGCCGGCGT
TGCTATTTGCGTGGCGGGAATGGACGGCGCCATGCCGGGGGTAGTGGCCG
GGCTGGTCAAGTGCCCGGTCGTCGCCGTGCCCACGAGCGTGGGGTACGGG
GCGGCGATGTCGGGCCTGGCGCCCTTGCTAACCATGCTGAACGCGTGCGC
CCCCGGAGTGTCGGTCGTGAACATTGACAACGGCTTCGGGGCCGCAGCGT
TTGCCGTCAAGCTGCTCAAGAGCGGCAAGGCCGCCGCTGCCGCCGCCGCC
GCGACACGAGGGGGTGACGGGGATGCTTAG
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