mRNA_L-elsbetiae_contig6466.15143.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6466.15143.1
Unique NamemRNA_L-elsbetiae_contig6466.15143.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Match: D8LQ35_ECTSI (Galactinol--sucrose galactosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ35_ECTSI)

HSP 1 Score: 449 bits (1154), Expect = 1.050e-144
Identity = 279/538 (51.86%), Postives = 307/538 (57.06%), Query Frame = 1
Query:    1 QEGEKPAALIHCMCHAPSVLFLVACVSEDRVILRGSDDFYPRERNSHGPHLYSNAFNALLLSNLGVQDWDMFQTGLGPEARRGHADAATSPATSPASLGEDS-ASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLDDGSVLRASTNALPTLDCLFRDPQQVGGGLLQVWALNALPGTGVVGSFNIQGASFSQSERTWARHDXXXXXXXXXXXXXXXXXXXGGVLVRGTVSPFDVHAFRPTTKPPTPPXXXXXXXXXXXXXXXXXXXXXXXXXYAVYLHRRREARVVGLRGTVGIEVLPLGYELATFSRVVDLRVSPSSTATAXXXXXXXXXXXXXXXXXXXXXXXXAAESRDADR----RVGGVVRWAALGLSAMFNSSAAVTAQVLAVQEDSDXXXXXXXXXXXXXXXXXAVVGVSLTVKGSGTFLAVASRKPASARLYGAGGXXXXXDTSXXXXXXXXXXXXXXXXXXXXXXXXVLLQVSFSALSGHDE----WTNMSEGGAGAGEGSARMGLVEVDIPGPWDGRERRLVFSW 1587
            +EG +PAALIHCMCHAPSVLF +ACVSEDR ++RGSDDFYPRE  SHGPHLYSN+FNALLLSNLGVQDWDMFQTGLG +         T  A   A L E + ASWFHAAARAISGGPVYVSDRPGQHN DIL +LVL+DGSV RASTNALPTLDCL RDPQ+ GGGLLQVWALN L GTGVVGSFN++GASFSQSER W R                     GG  V GTVSP DVHAFR  TKP                             +A+YLHRRRE RVV L   V IEVLPL YELATFSRV+ LR+ P   +T+                          ESRD DR         VRWA LGLS MFNSSAAV+AQ                           V GV++ VKGSG FLAVASR+P+   L G GG                                 +L  SFSAL          T +S GG  AG     +GLVEV IPGPWDGRER+L F W
Sbjct:  446 KEGGRPAALIHCMCHAPSVLFHIACVSEDRAVIRGSDDFYPREDLSHGPHLYSNSFNALLLSNLGVQDWDMFQTGLGVQG--------TGDAAGAAGLSEGANASWFHAAARAISGGPVYVSDRPGQHNADILRKLVLEDGSVPRASTNALPTLDCLMRDPQEEGGGLLQVWALNPLAGTGVVGSFNVRGASFSQSERAWVR-------------AGRDDEARGGGAVEGTVSPSDVHAFR-ITKPHADRAGGAGEMPPAPGDGVEENEDETRCCFALYLHRRRETRVVSLLEAVAIEVLPLSYELATFSRVIGLRLPPLGISTSGEQQQGSSAAD-------------VVESRDGDRPGYDAQEDTVRWAILGLSDMFNSSAAVSAQ-------EPFQRGATTRSSGVECDGGMVPGVAVYVKGSGKFLAVASRQPSRVTLGGVGGDGAVGSAGLEQGVIHREDGRDDSGRAGGSGDVTVLDASFSALCAATPDGPPSTALSVGGGRAG-----LGLVEVVIPGPWDGRERQLTFWW 936          
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Match: D7FLK6_ECTSI (Galactinol--sucrose galactosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK6_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 1.240e-51
Identity = 110/242 (45.45%), Postives = 137/242 (56.61%), Query Frame = 1
Query:    4 EGEKPAA--LIHCMCHAPSVLF-LVACVSEDRVILRGSDDFYPRERNSHGPHLYSNAFNALLLSNLGVQDWDMFQTGLGPEARRGHADAATSPATSPASLGEDSASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLDDGSVLRASTNALPTLDCLFRDPQQVGGGLLQVWALNALPGTGVVGSFNIQGASFSQSERTWA---RHDXXXXXXXXXXXXXXXXXXXGGVLVRGTVSPFDVH 711
            +GEK     +IHCMCH   +L  L AC     VI RGSDDFYPR++ SH PH+Y+NAFN+L++S+ G+QDWDMFQT +G                         ASW HAA+RA+SGGPVY+SDRPG HN +IL R+VL+DG VL+   NALP L  LF DPQ+    LL +W     PG GVV  FN+ G+++SQ  RT+A                         GGV V G V P D H
Sbjct:  228 DGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVI-RGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGD------------------------ASWMHAASRAVSGGPVYISDRPGDHNTEILRRMVLEDGGVLKPPANALPCLKSLFVDPQREEDALLSIWNECEAPGHGVVAVFNLFGSAWSQGRRTYAPVRTSSGALSGVPVNGEPAGQNGGEGGVGVGGGVRPSDCH 444          
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Match: A0A6H5JFU4_9PHAE (Galactinol--sucrose galactosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU4_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 1.430e-49
Identity = 101/202 (50.00%), Postives = 128/202 (63.37%), Query Frame = 1
Query:    4 EGEKPAA--LIHCMCHAPSVLF-LVACVSEDRVILRGSDDFYPRERNSHGPHLYSNAFNALLLSNLGVQDWDMFQTGLGPEARRGHADAATSPATSPASLGEDSASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLDDGSVLRASTNALPTLDCLFRDPQQVGGGLLQVWALNALPGTGVVGSFNIQGASFSQSERTWA 600
            +GEK     +IHCMCH   +L  L AC     VI RGSDDFYPR++ SH PH+Y+NAFN+L++S+ G+QDWDMFQT +G                         ASW HAA+RA+SGGPVY+SDRPG HN +IL R+VL+DG VL+   NALP L  LF DPQ+    LL +W     PG GVV  FN+ G+++SQ  RT+A
Sbjct:  573 DGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVI-RGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGD------------------------ASWMHAASRAVSGGPVYISDRPGDHNTEILRRMVLEDGGVLKPPANALPCLKSLFVDPQREEDALLSIWNECEAPGHGVVAVFNLFGSAWSQGRRTYA 749          
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Match: A0A7S3Y1T0_HETAK (Galactinol--sucrose galactosyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1T0_HETAK)

HSP 1 Score: 186 bits (471), Expect = 9.610e-48
Identity = 101/197 (51.27%), Postives = 122/197 (61.93%), Query Frame = 1
Query:   25 LIHCMCHAPSVLFLVACVSEDRVILRGSDDFYPRERNSHGPHLYSNAFNALLLSNLGVQDWDMFQTGLGPEARRGHADAATSPATSPASLGEDSASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLDDGSVLRASTNALPTLDCLFRDPQQVGGGL-LQVWALNALPGT--GVVGSFNIQGASFSQSERTWARH 606
            LIHCMCH   +L L+A + E R ++RGSDD YPR+  SHGPHLY NAFNALL+S +G+QDWDMFQT LGP                         SW H AARA+SGGPVYVSDRPG+H+  +L RLVL  G VLR++ NALP L  LF DPQ  G    L VW  +A  G   GV+G F++ GA +    R +A H
Sbjct:  264 LIHCMCHDSEILLLLAGLYEHRPLVRGSDDHYPRDPASHGPHLYFNAFNALLVSFVGLQDWDMFQTALGP------------------------GSWLHGAARAVSGGPVYVSDRPGEHDAALLRRLVLPGGGVLRSAHNALPVLGSLFEDPQAAGARRPLAVWNTHATAGNAAGVLGLFHVAGAGWHARRRKFAFH 436          
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Match: A0A835YGP5_9STRA (Galactinol--sucrose galactosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGP5_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.750e-46
Identity = 158/488 (32.38%), Postives = 209/488 (42.83%), Query Frame = 1
Query:   25 LIHCMCHAPSVLFLVACVSEDRVILRGSDDFYPRERNSHGPHLYSNAFNALLLSNLGVQ----------------DWDMFQTGLGPEARRGHADAATSPATSPASLGEDSASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLD-----------------------------------------DGSVLRASTNALPTLDCLFRDPQQVGGGLLQVWALNALPGTGVVGSFNIQGASFSQSERTWARHDXXXXXXXXXXXXXXXXXXXGGVLVRGTVSPFDVHAFRPTTKPPTPPXXXXXXXXXXXXXXXXXXXXXXXXXYAVYLHRRREARVVGLRGTVGIEVLPLGYELATFSRVVDLRVSPSSTATAXXXXXXXXXXXXXXXXXXXXXXXXAAESRDADRRVGGVVRWAALGLSAMFNSSAAVTAQVLAVQEDSDXXXXXXXXXXXXXXXXXAVVGVSLTVKGSGTFLAVASRKPASARLYG 1317
            +IHCMCH   +L  +      R ++RGSDDFYPR+  SHG HLYSNAFNALL+ + G+Q                DWDMFQT LGP                         SW HAA+RAISGGPVY+SDRPG H+ DIL R+VL+                                         DG +LR   NA+P    LF +PQ  GGGLL +W  N  PG GV+G+FNI+G++++Q  R +A +                      VL++ T  P   H  +      TP          XXXXXXXXXXX     +A+YLHRR +  ++ L   V I +    +ELA  +RV  L   P                                            VRWA++GL+ MFN+  AV A+  +  ++                   A   +S+ +KG+G FLA  S +P S  L G
Sbjct:  672 IIHCMCHDNEILLTLPSCYARRPLIRGSDDFYPRDEASHGSHLYSNAFNALLIGHCGLQAKALDGFTHHALAGLRDWDMFQTTLGP------------------------VSWMHAASRAISGGPVYISDRPGAHDTDILKRIVLEAQRXXXXXXXXXXXXXVRQPRFSACVRSXXXXXXXXXXXXEDGGILRPVQNAMPAARTLFDNPQTQGGGLLTLWNENPAPGHGVLGAFNIRGSAWNQQRRAYAFNSASPDRAREEIRGSLSPRDCN-VLIKQTRRPRHDHPLKTPHAHATP----AVMEAAXXXXXXXXXXXDENEIFAMYLHRRGKLLLLRLSDEVPIALGASQFELAAIARVTTL---PGKAG----------------------------------------VRWASVGLADMFNAGGAVLAERSSAAQNG------------------AATTLSIDLKGAGRFLAHCSVRPTSVTLDG 1069          
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Match: A0A836CJ91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ91_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.890e-40
Identity = 119/323 (36.84%), Postives = 148/323 (45.82%), Query Frame = 1
Query:   22 ALIHCMCHAPSVLFLVACVSED-------------RVILRGSDDFYPRERNSHGPHLYSNAFNALLLSNLG-VQDWDMFQTGLGPEARRGHADAATSPATSPASLGEDSASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLDDGSVLRASTNALPTLDCLFRDPQQ-VGGGLLQVWALNALPGTGVVGSFNIQGASFSQSERT--WAR-HDXXXXXXXXXXXXXXXXXXXGGVLVRGTVSPFDVHAFRPTTKPPTPPXXXXXXXXXXXXXXXXXXXXXXXXXYAVYLHRRREARVVGLRGTVGIEVLPL-GYELATFSRV 933
            A+IHCMCH  ++L  +     D             R I+RGSDDFYPR+  SHG H+Y+NAFNALLL+  G +QDWDMFQT LG                             HAAARAISGGPVY+SDRPG+H+  ++ ++VL+DGSV RA  +ALPTL  LF D Q      LL +W  N   G GVVG FN+ G+ + Q  R   W R H+                         GT+ P D HA                                    +AVYLH   E  V  L   V    L +  +ELA+ SRV
Sbjct:  155 AVIHCMCHDSAMLLQLPVHYPDGRGGXXXXXXSGVRPIVRGSDDFYPRDPASHGTHIYANAFNALLLAYCGALQDWDMFQTSLGAVGA------------------------MHAAARAISGGPVYISDRPGEHDAALIRKMVLEDGSVPRARRSALPTLPSLFVDAQHDKSRPLLSIWNENPAHGHGVVGVFNVYGSRWDQRARAYRWVRGHEAHRLSFTYT------------AAAEGTIRPRDCHAL----------------LRQEIAAAAGSVMKPADAQFAVYLHNAMELHVRSLDEAVATGALGMYAFELASISRV 425          
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Match: A0A836CF54_9STRA (Raffinose synthase or seed imbibition protein Sip1-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF54_9STRA)

HSP 1 Score: 145 bits (365), Expect = 6.680e-37
Identity = 84/179 (46.93%), Postives = 108/179 (60.34%), Query Frame = 1
Query:   88 RVILRGSDDFYPRERNSHGPHLYSNAFNALLLSNLG-VQDWDMFQTGLGPEARRGHADAATSPATSPASLGEDSASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLDDGSVLRASTNALPTLDCLFRDPQQ----VGGGLLQVWALNALPGTGVVGSFNIQGASFSQSERT--WAR 603
            R I+RGSDDFYPR+  SHG H+Y+NAFNALLL++ G +QDWDMFQT LG                             HAAARAISGGPVY+SDRPG+H+  ++ ++VL+DGSV RA  +ALPTL  LF D Q     +   +   +++N   G GVVG FN+ G+ + Q  R   W R
Sbjct:    1 RPIVRGSDDFYPRDPASHGTHIYANAFNALLLAHCGTLQDWDMFQTSLGAVGA------------------------MHAAARAISGGPVYISDRPGEHDAALIRKMVLEDGSVPRARRSALPTLLRLFVDAQVRAQCISVHVCMYYSMNPARGHGVVGIFNVYGSRWDQRARAYRWVR 155          
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Match: A0A2P6TW59_CHLSO (Galactinol--sucrose galactosyltransferase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TW59_CHLSO)

HSP 1 Score: 153 bits (386), Expect = 9.330e-36
Identity = 90/195 (46.15%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   25 LIHCMCHAPSVLFLVACVSEDRVILRGSDDFYPRERNSHGPHLYSNAFNALLLSNLGVQDWDMFQTGLGPEARRGHADAATSPATSPASLGEDSASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLDDGSVLRASTNALPTLDCLFRDPQQVGGGLLQVWALNALPGTGVVGSFNIQGASFSQSERTWARHD 609
            +I+CMCH+   ++       D  + R SDDFYP +R SH PHL + AFN L LS L + DWDMF +      R   AD                    HAAARA+SGGPVYVSD PG H+ D+L +LVL DGSVLRA     PT D LF+D  + G  LL+VW +NA   TGVVG FN+QG+S+ +S R +  H+
Sbjct:  442 VINCMCHSTENIYRW----RDTAVARASDDFYPTDRASHIPHLAACAFNGLFLSPLALPDWDMFSS------RHVAAD-------------------IHAAARAVSGGPVYVSDAPGSHSFDVLRKLVLPDGSVLRALLPGRPTRDTLFKDVMRDGNTLLKVWNMNAT--TGVVGVFNLQGSSWDRSRRRFFIHN 605          
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Match: A0A2P6VS05_9CHLO (Galactinol--sucrose galactosyltransferase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VS05_9CHLO)

HSP 1 Score: 149 bits (376), Expect = 1.740e-34
Identity = 89/194 (45.88%), Postives = 111/194 (57.22%), Query Frame = 1
Query:   28 IHCMCHAPSVLFLVACVSEDRVILRGSDDFYPRERNSHGPHLYSNAFNALLLSNLGVQDWDMFQTGLGPEARRGHADAATSPATSPASLGEDSASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLDDGSVLRASTNALPTLDCLFRDPQQVGGGLLQVWALNALPGTGVVGSFNIQGASFSQSERTWARHD 609
            I+CMCH+   ++       D  + R SDDFYP +R SH PHL + AFNAL LS L + DWDMF +      R   AD                    HAAARA+SGGPVYVSD PG H+ D+L +LVL DGSVLR      PT D LF D  + G  LL++W LNA    GVVG FN+QG+S+ +S R +  H+
Sbjct:  477 INCMCHSTENIYRW----RDTAVARASDDFYPTDRASHIPHLAACAFNALFLSPLALPDWDMFSS------RHVAAD-------------------IHAAARAVSGGPVYVSDAPGSHSFDVLRKLVLPDGSVLRGLLPGRPTRDTLFADVLRDGTSLLKIWNLNAT--VGVVGVFNLQGSSWDRSRRRFHIHN 639          
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Match: UPI0009E326D4 (probable galactinol--sucrose galactosyltransferase 6 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E326D4)

HSP 1 Score: 147 bits (371), Expect = 5.760e-34
Identity = 86/188 (45.74%), Postives = 110/188 (58.51%), Query Frame = 1
Query:   28 IHCMCHAPSVLFLVACVSEDRVILRGSDDFYPRERNSHGPHLYSNAFNALLLSNLGVQDWDMFQTGLGPEARRGHADAATSPATSPASLGEDSASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLDDGSVLRASTNALPTLDCLFRDPQQVGGGLLQVWALNALPGTGVVGSFNIQGASFSQSER 591
            I CMCH    L+   C  +  V+ R SDDFYPR+  SH  H+ S AFN++ L    V DWDMF + L P                        A  FHA+ARAISGGPVYVSD PG+HN ++L +LVL DGS+LRA     PTLDCLF DP +    LL++W +N    TGV+G +N QGA++S +E+
Sbjct:  419 IACMCHHTDALY---CAKQTAVV-RASDDFYPRDPVSHTIHIASVAFNSVFLGEFMVPDWDMFHS-LHP------------------------AGEFHASARAISGGPVYVSDAPGKHNFELLKKLVLPDGSILRARLPGRPTLDCLFTDPARDNVTLLKIWNMNKF--TGVLGIYNCQGAAWSSTEK 575          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6466.15143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ35_ECTSI1.050e-14451.86Galactinol--sucrose galactosyltransferase n=2 Tax=... [more]
D7FLK6_ECTSI1.240e-5145.45Galactinol--sucrose galactosyltransferase n=1 Tax=... [more]
A0A6H5JFU4_9PHAE1.430e-4950.00Galactinol--sucrose galactosyltransferase n=1 Tax=... [more]
A0A7S3Y1T0_HETAK9.610e-4851.27Galactinol--sucrose galactosyltransferase n=1 Tax=... [more]
A0A835YGP5_9STRA2.750e-4632.38Galactinol--sucrose galactosyltransferase n=1 Tax=... [more]
A0A836CJ91_9STRA1.890e-4036.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF54_9STRA6.680e-3746.93Raffinose synthase or seed imbibition protein Sip1... [more]
A0A2P6TW59_CHLSO9.330e-3646.15Galactinol--sucrose galactosyltransferase n=1 Tax=... [more]
A0A2P6VS05_9CHLO1.740e-3445.88Galactinol--sucrose galactosyltransferase n=1 Tax=... [more]
UPI0009E326D45.760e-3445.74probable galactinol--sucrose galactosyltransferase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6466contigL-elsbetiae_contig6466:5531..10450 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score451.4
Seed ortholog evalue5.7e-124
Seed eggNOG ortholog2880.D8LQ35
Preferred nameAGA1
KEGG rclassRC00049,RC00059
KEGG koko:K06617
KEGG ReactionR02411
KEGG Pathwayko00052,map00052
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004553,GO:0004557,GO:0005575,GO:0005911,GO:0005975,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009506,GO:0009628,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0030054,GO:0033530,GO:0034484,GO:0044238,GO:0050896,GO:0052692,GO:0055044,GO:0071704,GO:0080167,GO:1901575
EggNOG free text desc.galactinol-sucrose galactosyltransferase activity
EggNOG OGs2CC3R@1,2QPVE@2759
EC2.4.1.82
COG Functional cat.S
CAZyGH36
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size1602
Cds size1602
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816713.514196-CDS-L-elsbetiae_contig6466:5530..57731622816713.514196-CDS-L-elsbetiae_contig6466:5530..5773Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 5531..5773 -
1691683759.296046-CDS-L-elsbetiae_contig6466:5530..57731691683759.296046-CDS-L-elsbetiae_contig6466:5530..5773Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 5531..5773 -
1622816713.5292742-CDS-L-elsbetiae_contig6466:5824..63861622816713.5292742-CDS-L-elsbetiae_contig6466:5824..6386Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 5825..6386 -
1691683759.3073404-CDS-L-elsbetiae_contig6466:5824..63861691683759.3073404-CDS-L-elsbetiae_contig6466:5824..6386Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 5825..6386 -
1622816713.544371-CDS-L-elsbetiae_contig6466:6569..68341622816713.544371-CDS-L-elsbetiae_contig6466:6569..6834Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 6570..6834 -
1691683759.316163-CDS-L-elsbetiae_contig6466:6569..68341691683759.316163-CDS-L-elsbetiae_contig6466:6569..6834Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 6570..6834 -
1622816713.5601585-CDS-L-elsbetiae_contig6466:7584..77381622816713.5601585-CDS-L-elsbetiae_contig6466:7584..7738Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 7585..7738 -
1691683759.3256807-CDS-L-elsbetiae_contig6466:7584..77381691683759.3256807-CDS-L-elsbetiae_contig6466:7584..7738Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 7585..7738 -
1622816713.5726962-CDS-L-elsbetiae_contig6466:8708..88281622816713.5726962-CDS-L-elsbetiae_contig6466:8708..8828Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 8709..8828 -
1691683759.338488-CDS-L-elsbetiae_contig6466:8708..88281691683759.338488-CDS-L-elsbetiae_contig6466:8708..8828Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 8709..8828 -
1622816713.5836616-CDS-L-elsbetiae_contig6466:9400..95741622816713.5836616-CDS-L-elsbetiae_contig6466:9400..9574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 9401..9574 -
1691683759.3477466-CDS-L-elsbetiae_contig6466:9400..95741691683759.3477466-CDS-L-elsbetiae_contig6466:9400..9574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 9401..9574 -
1622816713.5945415-CDS-L-elsbetiae_contig6466:10366..104501622816713.5945415-CDS-L-elsbetiae_contig6466:10366..10450Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 10367..10450 -
1691683759.3567781-CDS-L-elsbetiae_contig6466:10366..104501691683759.3567781-CDS-L-elsbetiae_contig6466:10366..10450Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6466 10367..10450 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6466.15143.1prot_L-elsbetiae_contig6466.15143.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6466 5531..10450 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6466.15143.1

>prot_L-elsbetiae_contig6466.15143.1 ID=prot_L-elsbetiae_contig6466.15143.1|Name=mRNA_L-elsbetiae_contig6466.15143.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=534bp
QEGEKPAALIHCMCHAPSVLFLVACVSEDRVILRGSDDFYPRERNSHGPH
LYSNAFNALLLSNLGVQDWDMFQTGLGPEARRGHADAATSPATSPASLGE
DSASWFHAAARAISGGPVYVSDRPGQHNRDILSRLVLDDGSVLRASTNAL
PTLDCLFRDPQQVGGGLLQVWALNALPGTGVVGSFNIQGASFSQSERTWA
RHDDDDDDDDDDDDDAGGGGGNGGVLVRGTVSPFDVHAFRPTTKPPTPPA
PTPAHAHAHASEGCAASSSSSSSSYAVYLHRRREARVVGLRGTVGIEVLP
LGYELATFSRVVDLRVSPSSTATATASATATATAMATAAATAAATGTAAA
ESRDADRRVGGVVRWAALGLSAMFNSSAAVTAQVLAVQEDSDDAEEAEEA
GRASGGGGGAVVGVSLTVKGSGTFLAVASRKPASARLYGAGGGAGAGDTS
AASRLSGGEDGGGGGGSGGGGGGAVLLQVSFSALSGHDEWTNMSEGGAGA
GEGSARMGLVEVDIPGPWDGRERRLVFSWVLDS*
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mRNA from alignment at L-elsbetiae_contig6466:5531..10450-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6466.15143.1 ID=mRNA_L-elsbetiae_contig6466.15143.1|Name=mRNA_L-elsbetiae_contig6466.15143.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4920bp|location=Sequence derived from alignment at L-elsbetiae_contig6466:5531..10450- (Laminarionema elsbetiae ELsaHSoW15)
CAGGAGGGCGAGAAACCGGCCGCGCTGATCCACTGCATGTGCCACGCGCC GTCGGTGCTGTTCCTCGTCGCCTGTGTGTCTGAGGTGCGGTGAAGATTGA TCAAGCCTAGCACCCACCCGGGCTTTATTCCATTTGGTGCATTCGATGTT TTTTTTTTTTTTTTGTCTGCCCATTATTGGATTTTGTCGTCTGCCCCTCT GGCCCCCATCCTCCACTTCTACTCTAGCTAGACGACCCAACCGGGGTCAC ATAGGAGGGGGGAGTTGGATCCCCTCCTGCGGTGCCTGCCTAGTTTTTTT TTATCATATCAAACGATGTCGTACTTACATATTTGGTAGTGACTCGGGAG ATTTTGTTCTAGAGATTTTGTTCGAGATTTGGTGCTTTCAATGCATCAAA GGCGATGTCGTACTCACATAGTAATAAGAGGCCGAGCTTTTTTTTTCGAG AAAAAAGGAAACGGAATGTGTGTGTGTGTGTTTTGCACGCCGGGGTGGCA CACCTCTGTGCCTGGGCCTCTTGGATTTGACCGGCGATCGGGGACGCACG CGACAGACAGCAAAAAAAAGAGGTTCTTGTGAAAAAAAAAAAACTGCTCT GCCTTTTTGCCGTGGTGAGCGGCGGCGGCCTTACATTACAACAAAAGCCA TGGGCTTTCGACATCCACACCAACCGCCGAAACCAGCAGCGGTGCATGCA TACATAGCAAAACAATCATGCGGCCAGGAGGTGCAAAGTCTCTTTTTTTA GTCCGCTCTCATCAACCCCGAATATTGCTCCTGACGGTAGATACGACCTG ACTGACACTGCTGTACATCGTACCTGTGTGTGTGTGTATGTTTTGTTTTT GTTGTGCGTGCATAATAAACACACAGGACCGTGTGATTCTCCGCGGGTCG GACGACTTCTATCCCCGGGAAAGAAACAGCCACGGGCCGCACCTCTACTC GAACGCCTTTAACGCCCTCCTGCTGTCAAACCTAGGCGTACAGGACTGGG ACATGTTCCAGACCGGGCTTGGCCCTGAGGCAAGGAGGGGGCACGCGGAC GTACATAGGCCCCGCCGGGCGGGGTGCGCGTTGCGTTGCATCGCGCCGAA ATATATATAATCGCGACATTGTTGTGTTGTGTTGTTTGGTTATTGTTGTG TGGTGGGTGATCTGGCATTCCTTGGCAAGGCAAGCGCGGTTACACCACTG GTCCTTGGCATGATGCCGCTGTGGGTTGCCTGCCTGCCTGCCTGCCTGTC TGCCTGCCTGTCTGCCTGTCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTG CCTAGCTGCAGCTGCGCGCACGCGTCAGCGCGCACGCGTGCGTACATGAT ACTTGCTTGCTTACTTCGAATTCCGGGATGTGGGCGGGTCCAGCCAACCG CGCCATGCCATGCCGTACCATGCCGTACCATGCCGTGGCGCACGCTGAGC CTAGCCGAGCCTGACCCGCGTGTGTTCGCTGACTGACTTGACGCGCCGAA TAAGCGTCGCTCCATCCTGAAGTCTCGTATTGCGCCACATCCCGCGTCGT GCGGCGCTGCTGTGACAGGGCGCTGCTGGGGAAGCAGCGGCGGCCGCGGC GGCGGCGGCGGCCGGCGCGCAGGCGGCAACCAGCCCGGCAACCAGCCCGG CTTCCCTGGGAGAGGACTCGGCTAGCTGGTTCCACGCGGCGGCTCGGGCG ATCAGCGGCGGGCCTGTCTACGTGTCCGATCGCCCGGGACAGGTATGTCC GTAAACTCTGGCTTTTTGCGGGAGAGGGGTCTTCAATGGTTTTGGATAAG GGGCGTTATAAACGCAGCGCAATTTTTCGGGACCAGAAAAACAAGGAACA GTCATTTGCGGCGGGCGTCCCAGAGAAATACGCAAATTTGGAACTTCCAA AAATTTTGCAAAGAACGGTCGCTTCCAAAATTTTGGAACGGTTTCCAAGT TCCAAATTCCAAATCCTGTAGGATAAAAAAAATTGGAGCGCTTAAAACGC CCCTCAGCCGCCACCATCCGCCAACACATGAACAGGTAGCTTTGTTCACC TCTCGTTGCCTTTTCGCCGGACGAGAAGTCCTCATGTCCTAGACTGTGTA CCTATTCGAAGAAGCGAAACGCCGGTAACGAACGCTGCTCAACCTGTCCT TTGGTGCACCAACGCCCGTCCCTTAATGAGAAGAATATTTTCATCTTCCG GCGGCAGGCTGGAGAGCACAACCCGTTCGGTATTTGGCGCTTTCCTTCAA TCTGTCATGCGGGAGTATGTCTCTTGGCAACGGGTCTTGCGCATTGAAAC GTTTTGGAAACTTGGGCCCCCCGAGCATGCTGTGATGAAAAGAGGCGCCG TCTTGACACGTGTCTGTGTAGCTTCGCGCCCTATTGGACAGCAGAATTAT ATCAACGTGGCCAAGACGGCCATGCGAGCCCGTCAACCCGGCTTGATTCG CCCCCGTGTGTTGCTGTGTTGTCAACGCAGCAGTACGCCATTTCCACGTA CTCTTGCGTATTAAGATCGATCAAGATGATCAGTTTAGAGGTGAGCACAC ACGCGCAGAGACAGCGGTCGACCTCCGGGACCAGAATGCGGATGCACACA CACACTGCTGCTGAGCCGTTGCAAAGGAGGCTGGTTAAAACATGACGTCG AGGCGCCTTTCTCTCTCGACGCCTCTCTCCTTTTCCCTCGTCGCGACCTT TCCCCCGCGCAGCATAACAGAGACATCCTCAGCAGGCTCGTGCTCGATGA CGGCTCGGTCCTGAGGGCTAGCACCAACGCGCTTCCCACTCTGGACTGCC TCTTCAGAGACCCGCAGCAGGTTGGCGGGGGCCTCCTGCAAGTTTGGGCC CTCAACGCCCTTCCGGGTAGGCAAGCGGTTCGGAGACAAAGCCCAAAGGG TATTCACACGGCATTGCTACATATTTATGGAGCTCGCAGGGGTGTAAGCC GCGGCGTGTTCACGCGCTCGTATCGCAAGGCATAAGTAGCACATGAGCAT GGAAGCTTGGGGCCAGGGCGGAATCTTCAAGAAATCGGCACACGGCGGCA CCTTATTTATCCTCACGGATTTAGCGTAGAGAGCCTTCGACTGGCCCAAT TATTTCGTCGCTTCTGTGTTTCCTGGTGGGGGTGCGTGGCTTGCGCCGTG TGCGCCGATTGCCGCTGAACTGACGACACGACGAGAGGGAAATTGTTCGT GCTTCGAGCGTTGCGTGTATTTCACGCGACTCTTGGCGCTCATGAGAACG GATCGCAAGTTAAGGCGCCGCGCTTTCGTGTGAACACGCGTCATTTTGCC CTTTGACCTTCCACCAGGTACTTGTTGATGTTGGAGTAGTCAAGGGGTGG CCTACAGGTAAAATAATCTTATTTTTCTCAGCGTGCTTCAGGTGTGGTAT TATAGGTGTACTACATATTCTTCAGTTTTGGGAGTTGTGTAAATCTCCTT TCTCCCTCTTTTCCTTTCTCTCTCTCTCCCTCTCTCTCCATATATATACT ATTGGTACATATTTTGCCGTCTTCCCTGATCCCGCAAAACATCAATACAC CGTCAACACCATCACAATCCATGCTTGCATGTGTTTTTCGCGGCGTTTTT CTTTCGATGCGTGCAGGCACGGGGGTGGTTGGCAGCTTCAACATTCAAGG CGCCAGCTTCAGCCAATCGGAACGGACGTGGGCACGGCACGACGACGACG ACGACGACGACGACGACGACGACGACGACGCCGGCGGCGGCGGCGGTAAC GGAGGAGTCCTCGTCAGGGGCACAGTGTCCCCCTTCGATGTGCACGCCTT CCGCCCGACGACGAAACCGCCGACACCCCCCGCCCCCACCCCCGCCCACG CCCACGCCCACGCGAGCGAGGGTTGCGCCGCGTCCATCACCACCGAAGCC GGCCGATCGCCCGTCGGAGGCAGAGGCGGAGGCGGACGGGCCGAGGCCGA GGTCGAGGAGGGGGGGGAGGAGAGCAGGAGCGGAGAGCGCGCCGACGGTG GAGACGACAGAGACAGAGACGAGGGTAAAGACAAAGAGTCGGGCACAGAC GAAAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTACGCGGTGTA CCTGCACCGCCGTCGGGAGGCGCGTGTGGTCGGCCTGCGCGGGACCGTCG GGATCGAGGTCCTCCCGCTCGGTTACGAGCTGGCGACCTTCTCGAGGGTT GTGGACCTCCGGGTTTCGCCCTCGTCTACAGCTACGGCTACGGCTTCGGC TACGGCTACGGCTACGGCTATGGCCACGGCTGCGGCTACGGCTGCGGCTA CGGGTACGGCAGCAGCGGAGAGCCGAGACGCAGATCGGCGGGTCGGGGGG GTGGTGAGGTGGGCGGCTCTCGGGTTGTCCGCGATGTTCAACTCTTCGGC CGCGGTGACGGCGCAAGTTTTAGCTGTGCAGGAAGACAGCGACGATGCGG AAGAAGCAGAAGAAGCGGGAAGAGCAAGCGGCGGCGGCGGCGGCGCGGTC GTGGGGGTGTCGCTGACGGTCAAGGGTAGCGGCACGTTTTTGGCGGTGGC CAGCCGAAAGCCCGCAAGCGCCCGCCTCTACGGGGCCGGAGGCGGGGCCG GGGCCGGGGACACGTCGGCAGCGAGCGTGCGAACGGTGGCACCGGCAGCC GCGCGGGAGCCGTCGGATGGGGGAAAGCGTCTGTCCGGGGGTGAAGATGG CGGTGGTGGCGGTGGTAGTGGTGGGGGTGGTGGTGGTGCTGTCCTTCTCC AAGTATCGTTCTCGGCCTTGTCCGGTCACGATGAGTGGACAAATATGTCG GAGGGCGGGGCAGGGGCAGGCGAAGGGAGTGCGCGGATGGGGCTGGTGGA GGTTGACATCCCTGGCCCCTGGGATGGCCGGGAGAGGCGGCTAGTGTTTA GTTGGGTTTTGGACTCGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6466:5531..10450-

>mRNA_L-elsbetiae_contig6466.15143.1 ID=mRNA_L-elsbetiae_contig6466.15143.1|Name=mRNA_L-elsbetiae_contig6466.15143.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3204bp|location=Sequence derived from alignment at L-elsbetiae_contig6466:5531..10450- (Laminarionema elsbetiae ELsaHSoW15)
CAGGAGGGCGAGAAACCGGCCGCGCTGATCCACTGCATGTGCCACGCGCC
GTCGGTGCTGTTCCTCGTCGCCTGTGTGTCTGAGCAGGAGGGCGAGAAAC
CGGCCGCGCTGATCCACTGCATGTGCCACGCGCCGTCGGTGCTGTTCCTC
GTCGCCTGTGTGTCTGAGGACCGTGTGATTCTCCGCGGGTCGGACGACTT
CTATCCCCGGGAAAGAAACAGCCACGGGCCGCACCTCTACTCGAACGCCT
TTAACGCCCTCCTGCTGTCAAACCTAGGCGTACAGGACTGGGACATGTTC
CAGACCGGGCTTGGCCCTGAGGCAAGGAGGGGGCACGCGGACGACCGTGT
GATTCTCCGCGGGTCGGACGACTTCTATCCCCGGGAAAGAAACAGCCACG
GGCCGCACCTCTACTCGAACGCCTTTAACGCCCTCCTGCTGTCAAACCTA
GGCGTACAGGACTGGGACATGTTCCAGACCGGGCTTGGCCCTGAGGCAAG
GAGGGGGCACGCGGACGCGGCAACCAGCCCGGCAACCAGCCCGGCTTCCC
TGGGAGAGGACTCGGCTAGCTGGTTCCACGCGGCGGCTCGGGCGATCAGC
GGCGGGCCTGTCTACGTGTCCGATCGCCCGGGACAGGCGGCAACCAGCCC
GGCAACCAGCCCGGCTTCCCTGGGAGAGGACTCGGCTAGCTGGTTCCACG
CGGCGGCTCGGGCGATCAGCGGCGGGCCTGTCTACGTGTCCGATCGCCCG
GGACAGCATAACAGAGACATCCTCAGCAGGCTCGTGCTCGATGACGGCTC
GGTCCTGAGGGCTAGCACCAACGCGCTTCCCACTCTGGACTGCCTCTTCA
GAGACCCGCAGCAGGTTGGCGGGGGCCTCCTGCAAGTTTGGGCCCTCAAC
GCCCTTCCGGCATAACAGAGACATCCTCAGCAGGCTCGTGCTCGATGACG
GCTCGGTCCTGAGGGCTAGCACCAACGCGCTTCCCACTCTGGACTGCCTC
TTCAGAGACCCGCAGCAGGTTGGCGGGGGCCTCCTGCAAGTTTGGGCCCT
CAACGCCCTTCCGGGCACGGGGGTGGTTGGCAGCTTCAACATTCAAGGCG
CCAGCTTCAGCCAATCGGAACGGACGTGGGCACGGCACGACGACGACGAC
GACGACGACGACGACGACGACGACGACGCCGGCGGCGGCGGCGGTAACGG
AGGAGTCCTCGTCAGGGGCACAGTGTCCCCCTTCGATGTGCACGCCTTCC
GCCCGACGACGAAACCGCCGACACCCCCCGCCCCCACCCCCGCCCACGCC
CACGCCCACGCGAGCGAGGGTTGCGCCGCGCACGGGGGTGGTTGGCAGCT
TCAACATTCAAGGCGCCAGCTTCAGCCAATCGGAACGGACGTGGGCACGG
CACGACGACGACGACGACGACGACGACGACGACGACGACGACGCCGGCGG
CGGCGGCGGTAACGGAGGAGTCCTCGTCAGGGGCACAGTGTCCCCCTTCG
ATGTGCACGCCTTCCGCCCGACGACGAAACCGCCGACACCCCCCGCCCCC
ACCCCCGCCCACGCCCACGCCCACGCGAGCGAGGGTTGCGCCGCCAGCAG
CAGCAGCAGCAGCAGCAGCTACGCGGTGTACCTGCACCGCCGTCGGGAGG
CGCGTGTGGTCGGCCTGCGCGGGACCGTCGGGATCGAGGTCCTCCCGCTC
GGTTACGAGCTGGCGACCTTCTCGAGGGTTGTGGACCTCCGGGTTTCGCC
CTCGTCTACAGCTACGGCTACGGCTTCGGCTACGGCTACGGCTACGGCTA
TGGCCACGGCTGCGGCTACGGCTGCGGCTACGGGTACGGCAGCAGCGGAG
AGCCGAGACGCAGATCGGCGGGTCGGGGGGGTGGTGAGGTGGGCGGCTCT
CGGGTTGTCCGCGATGTTCAACTCTTCGGCCGCGGTGACGGCGCAAGTTT
TAGCTGTGCAGGAAGACAGCGACGATGCGGAAGAAGCAGAAGAAGCGGGA
AGAGCAAGCGGCGGCGGCGGCGGCGCGGTCGTGGGGGTGTCGCTGACGGT
CAAGGGTAGCGGCACGTTTTTGGCGGTGGCCAGCCGAAAGCCCGCAAGCG
CCCGCCTCTACGGGGCCGGAGGCGGGGCCGGGGCCGGGGACACGTCGGCA
GCGAGCCAGCAGCAGCAGCAGCAGCAGCAGCTACGCGGTGTACCTGCACC
GCCGTCGGGAGGCGCGTGTGGTCGGCCTGCGCGGGACCGTCGGGATCGAG
GTCCTCCCGCTCGGTTACGAGCTGGCGACCTTCTCGAGGGTTGTGGACCT
CCGGGTTTCGCCCTCGTCTACAGCTACGGCTACGGCTTCGGCTACGGCTA
CGGCTACGGCTATGGCCACGGCTGCGGCTACGGCTGCGGCTACGGGTACG
GCAGCAGCGGAGAGCCGAGACGCAGATCGGCGGGTCGGGGGGGTGGTGAG
GTGGGCGGCTCTCGGGTTGTCCGCGATGTTCAACTCTTCGGCCGCGGTGA
CGGCGCAAGTTTTAGCTGTGCAGGAAGACAGCGACGATGCGGAAGAAGCA
GAAGAAGCGGGAAGAGCAAGCGGCGGCGGCGGCGGCGCGGTCGTGGGGGT
GTCGCTGACGGTCAAGGGTAGCGGCACGTTTTTGGCGGTGGCCAGCCGAA
AGCCCGCAAGCGCCCGCCTCTACGGGGCCGGAGGCGGGGCCGGGGCCGGG
GACACGTCGGCAGCGAGCCGTCTGTCCGGGGGTGAAGATGGCGGTGGTGG
CGGTGGTAGTGGTGGGGGTGGTGGTGGTGCTGTCCTTCTCCAAGTATCGT
TCTCGGCCTTGTCCGGTCACGATGAGTGGACAAATATGTCGGAGGGCGGG
GCAGGGGCAGGCGAAGGGAGTGCGCGGATGGGGCTGGTGGAGGTTGACAT
CCCTGGCCCCTGGGATGGCCGGGAGAGGCGGCTAGTGTTTAGTTGGGTTT
TGGACTCGTGACGTCTGTCCGGGGGTGAAGATGGCGGTGGTGGCGGTGGT
AGTGGTGGGGGTGGTGGTGGTGCTGTCCTTCTCCAAGTATCGTTCTCGGC
CTTGTCCGGTCACGATGAGTGGACAAATATGTCGGAGGGCGGGGCAGGGG
CAGGCGAAGGGAGTGCGCGGATGGGGCTGGTGGAGGTTGACATCCCTGGC
CCCTGGGATGGCCGGGAGAGGCGGCTAGTGTTTAGTTGGGTTTTGGACTC
GTGA
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