mRNA_L-elsbetiae_contig6455.15127.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI) HSP 1 Score: 118 bits (295), Expect = 1.720e-25 Identity = 94/229 (41.05%), Postives = 125/229 (54.59%), Query Frame = 3 Query: 123 AENR-EVLGDSNGAIFRLMSGENSSD-WGQWLRAPLLHACRMGDSDLVDKLLEAGAEASNRGLGGNGRPLLHAAAHGGSERAVLSLLNAGSKPDIDYK-PDTGDRATALQVAVRRGKQEAAQVLMAAGADVAGT---------LAIAIEENHERLAVDLLLGGGDPN-EGANRRAPVLVLASRRGLTQLVSALLLKGANLRATTNRGDTALHEAAFRGDVSTARALLAA 770 AE+R ++LGD+ IF+LM +S+ W +WLRAPL HA + DLV+KLL+AGA+ S G + LLHAA V +L+ AG+ D++ K P TG T L VAV RG++ AA+VL+ AGADV LAI + R+A DLLL G +P G P+ V AS G +V AL A+L A +G T + A VST + LLAA Sbjct: 8 AEDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTG--GTPLHVAVMRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAASH-GRHDVVHALAHTRADLDALDGKGMTPISLAVEGDHVSTVKVLLAA 233
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Match: D7FY20_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY20_ECTSI) HSP 1 Score: 120 bits (302), Expect = 1.360e-24 Identity = 84/196 (42.86%), Postives = 106/196 (54.08%), Query Frame = 3 Query: 126 ENREVL---GDSNGAIFRLMSGENSSDWGQWLRAPLLHACRMGDSDLVDKLLEAGAEASNRGLGGNGRPLLHAAAHGGSERAVLSLLNAGSKPDIDYKPDTGD----RATALQVAVRRGKQEAAQVLMAAGADVAGTLAIAIEENHERLAVDLLLGGGDPNE-----GANRRAPVLVLASRRGLTQLVSALLLKGA 677 ENREVL G+ + A + S + WL+ PL AC G+SDLVDKLLEAGA + G+G +GR LLHAAA G+ER V +LL ++ DI+ K + R T LQVAVR G + A+ L+AAGAD+A L + DPNE G A L LA+ +G QLV ALL KGA Sbjct: 6 ENREVLQRKGEQSLAFEMMRSKAEPDQFADWLQGPLHLACDSGNSDLVDKLLEAGAGIAAGGIGEDGRTLLHAAAASGNERVVSALLRTPARADINIKSASHAHWRYRGTPLQVAVRGGHESVARTLIAAGADLALALTMXXXXXXXXXXXXXXXXXXDPNEVDNENGGGDGATPLALAAEQGFEQLVRALLHKGA 201
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 102 bits (253), Expect = 4.990e-20 Identity = 90/275 (32.73%), Postives = 132/275 (48.00%), Query Frame = 3 Query: 132 REVLGDSNGAIFRLMS-GENSSDWGQWLRAPLLHACRMGDSDLVDKLLEAGAEASNRGLGGNGRPLLHAAAHGGSERAVLSLLNAGSKPDIDYKPDTGDRATALQVAVRRGKQEAAQVLMAAGADV--------AGTLAIAIEENHERLAVDLLLGGGDPNE------GANRRAPVLVLASRRGLTQLVSALLLKGANLRATTNRGDTALHEAAFRGDVSTARALLAAAGGSSFDVFMRHRA---PLHSATMANSAA--IIDALVAAGADVEVND 896 R L +F+L+S G + W +WLR PL HA G+ +LV++LL+AGA+A G GR LL AAA GG+ + +L+ G+ D++ K R +AL A G + AA+ L+ GADV L+ AI+ +H +L DL +GG PN G +LA RRG +V LL GA+ + L AA + A+L G DV + RA LH+A + + A + L+ AGA+ E+ + Sbjct: 7 RTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVN-KVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGARPNIRDDCGLGKTTYVTTFMLAVRRGHLAIVETLLEAGADCSLRQWADYSPLDVAAEHRALPILEAIL----GRGVDVDAQDRAGCTALHTAVLFSDRAGPAVHMLIEAGANTELKN 276
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Match: D8LKW6_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW6_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 2.370e-16 Identity = 59/128 (46.09%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 126 ENREVLGDSNGAIFRLMSGENSS-DWGQWLRAPLLHACRMGDSDLVDKLLEAGAEASNRGLGGNGRPLLHAAAHGGSERAVLSLLNAGSKPDIDYKPDTGDRATALQVAVRRGKQEAAQVLMAAGADV 506 E+R L +F+L+S + +S W +WLRAPL HA GD+DL LL+AGA+ S G R LL AAA GG+E VL+LL+ G ++D +R TAL A+ G EAA+VLM AGADV Sbjct: 5 EDRTALNGLEKMLFKLVSEKAASAQWSEWLRAPLEHAVAEGDNDLALALLKAGADGSAGWEGCGDRTLLQAAAEGGNEEVVLTLLDNGGVEELDVVSGDNER-TALHRALAGGHTEAARVLMLAGADV 131
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Match: D8LDP2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP2_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 3.230e-14 Identity = 56/127 (44.09%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 126 ENREVLGDSNGAIFRLMSGE-NSSDWGQWLRAPLLHACRMGDSDLVDKLLEAGAEASNRGLGGNGRPLLHAAAHGGSERAVLSLLNAGSKPDIDYKPDTGDRATALQVAVRRGKQEAAQVLMAAGAD 503 E+R L +F+L+S + S+ W +WLRAPL HA GD DL LL+AGA + G N R LL AAA GG+E V +LL G +ID DR TAL A+ G AA+ LM AG+D Sbjct: 5 EDRTALKGLEKRLFKLVSEKATSAQWSEWLRAPLEHAVAEGDKDLALTLLKAGANGGSGWEGCNDRTLLQAAAEGGNEEVVSTLLGKGGLEEIDVASGDQDR-TALHRALIGGHTGAARALMVAGSD 130
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 1.760e-13 Identity = 52/126 (41.27%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 132 REVLGDSNGAIFRLMS-GENSSDWGQWLRAPLLHACRMGDSDLVDKLLEAGAEASNRGLGGNGRPLLHAAAHGGSERAVLSLLNAGSKPDIDYKPDTGDRATALQVAVRRGKQEAAQVLMAAGADV 506 R + I++L+S W +WLR PL HA G+ +LV+ LLEAGA+ S G GR L+ AAA GGSE V +LL AG++PD++ + R++ L A G ++AA+ L+ AGADV Sbjct: 7 RRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSS-LYTATVCGHKDAARRLITAGADV 131
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 1.450e-12 Identity = 53/126 (42.06%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 132 REVLGDSNGAIFRLMS-GENSSDWGQWLRAPLLHACRMGDSDLVDKLLEAGAEASNRGLGGNGRPLLHAAAHGGSERAVLSLLNAGSKPDIDYKPDTGDRATALQVAVRRGKQEAAQVLMAAGADV 506 R +L I++L+S W +WLR PL HA G+ +LV LL AGA+ S G GR L+ AAA GGSE V +LL AG++ D++ + R+ AL A G ++AA+ L+AAGADV Sbjct: 7 RRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRS-ALYTATMCGHEDAARRLVAAGADV 131
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 1.710e-12 Identity = 63/185 (34.05%), Postives = 90/185 (48.65%), Query Frame = 3 Query: 132 REVLGDSNGAIFRLMS-GENSSDWGQWLRAPLLHACRMGDSDLVDKLLEAGAEASNRGLGGNGRPLLHAAAHGGSERAVLSLLNAGSKPDIDYKPDTGDRATALQVAVRRGKQEAAQVLMAAGADVAGTLAIAIEENHERLAVDLLLGGGDPNEGANRRAPVLVLASRRGLTQLVSALLLKGANL 683 R +L I++L+S G W +WLR PL HA G+ +LV+ LLEAGA+ S G R L+ AAA GGSE V +LL AG++PD++ + R+ AL A G + AA+ L +R+ LLL G + A L+ A G +V+ LL GA++ Sbjct: 7 RRLLQGMESEIWKLVSYGATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWRGCLDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRS-ALYTATVCGHEHAARGL-------------------DRIVSALLLRGAYTDAQDTSGATPLIYACGSGHLSVVNTLLAAGADV 171
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Match: D7FYG4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG4_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 2.720e-11 Identity = 54/139 (38.85%), Postives = 68/139 (48.92%), Query Frame = 3 Query: 108 SSCCTAENREVLGDSNGAIFRLMSGE-----NSSDWGQWLRAPLLHACRMGDSDLVDKLLEAGAEASNRGLGGNGRPLLHAAAHGGSERAVLSLLNAGSKPDID-YKPDTGDRATALQVAVRRGKQEAAQVLMAAGADV 506 ++ T E+R LG + + S+ W +WLRAPL HA GD DL LL AGA + G N R LL AAA GG+E V +LL+ ++D D G T L A G AA+VLM AGA V Sbjct: 7 ATMATEEDRTALGRLETILLSINCSNWCGRTTSAQWAEWLRAPLEHAVAEGDKDLALTLLNAGANGGSGWKGCNDRTLLQAAAEGGNEEVVRTLLDIEGMEEVDAVSSDEG--GTELHRAAAGGHTNAARVLMLAGASV 143
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Match: A0A235F182_9RHOO (Uncharacterized protein n=1 Tax=Thauera propionica TaxID=2019431 RepID=A0A235F182_9RHOO) HSP 1 Score: 62.4 bits (150), Expect = 4.070e-7 Identity = 56/151 (37.09%), Postives = 73/151 (48.34%), Query Frame = 3 Query: 225 LHACRMGDSDLVDKLLEAGAEASNRGLGGNGRPLLHAAAHGGSERAVLSLLNAGSKPDIDYKPDTGDRATALQVAVRRGKQEAAQVLMAAGADVAGT----LAIAIEENHERLAVDLLLGGGDPNEGANRRAPVLVLASRRGLTQLVSALL 665 L A GD+ + LL G + + NG LL AA G AV +LL ++ I+Y+ GD TAL +AV RG ++ A+VL+ AGA V L A E E L DL+ G D N A A L+LA+R G V LL Sbjct: 43 LSAATSGDAKALSSLLHRGIDPDT--VDSNGNTLLILAARDGRTAAVEALLQYRAR--INYRNAAGD--TALMLAVLRGHEDTARVLIKAGAAVNQEGWTPLHYAAFEGREALLKDLVAAGADVNAPAPNLATPLMLAARNGHIGFVRQLL 187 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6455.15127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6455.15127.1 >prot_L-elsbetiae_contig6455.15127.1 ID=prot_L-elsbetiae_contig6455.15127.1|Name=mRNA_L-elsbetiae_contig6455.15127.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp MTWGGGAPTVLGPQTGRDNSSVLGCLPTYSSCCTAENREVLGDSNGAIFRback to top mRNA from alignment at L-elsbetiae_contig6455:854..4041- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6455.15127.1 ID=mRNA_L-elsbetiae_contig6455.15127.1|Name=mRNA_L-elsbetiae_contig6455.15127.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3188bp|location=Sequence derived from alignment at L-elsbetiae_contig6455:854..4041- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6455:854..4041- >mRNA_L-elsbetiae_contig6455.15127.1 ID=mRNA_L-elsbetiae_contig6455.15127.1|Name=mRNA_L-elsbetiae_contig6455.15127.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2106bp|location=Sequence derived from alignment at L-elsbetiae_contig6455:854..4041- (Laminarionema elsbetiae ELsaHSoW15)back to top |