mRNA_L-elsbetiae_contig6451.15122.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6451.15122.1
Unique NamemRNA_L-elsbetiae_contig6451.15122.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Match: D8LB42_ECTSI (Protein tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB42_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 1.620e-111
Identity = 171/185 (92.43%), Postives = 177/185 (95.68%), Query Frame = 2
Query:    8 DLMDGQEEMRHEARMLAKVCNHNCVVQFVGVLFRPTPSVVTMFMENGSVEGLLVSGDSPAKKELVGRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGNENLDVAFRVCSGERMTV 562
            +L++GQEEMRHEARMLAKVCNHNCVVQFVGVL RP PSVVTMFMENGSVE +LVS D  A K+LV RMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEG+ENLDVAFRVCSGERMTV
Sbjct:  692 NLVEGQEEMRHEARMLAKVCNHNCVVQFVGVLLRPVPSVVTMFMENGSVEDMLVSSDKKATKDLVCRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGHENLDVAFRVCSGERMTV 876          
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Match: A0A813CZ72_9DINO (Non-specific protein-tyrosine kinase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CZ72_9DINO)

HSP 1 Score: 219 bits (558), Expect = 9.370e-63
Identity = 102/183 (55.74%), Postives = 138/183 (75.41%), Query Frame = 2
Query:   29 EMRHEARMLAKVCNHNCVVQFVGVLFRPTPSVVTMFMENGSVEGLLVSGDSPAKKELVG-----RMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGNENLDVAFRVCSGERMTV 562
            E+ HEA ++++VC+H+ +VQF+GVL RP P+VVT FM  GS+E +L+     +  + +G     R+A++AA GV+HLH E V+HRD+A+RN L+D G  VR++DFGFSR++   AS+GYTRS  GPIKW +PEAMRKR YS  SD FSFGV+L+E+F  +PPW+G ENLDV FRVC GER+ V
Sbjct:  809 ELSHEAHLMSRVCSHDHIVQFIGVLSRPRPAVVTKFMALGSLEDILLQTSPRSMWKELGLPQLVRLAVQAAAGVLHLHHEDVIHRDIAARNCLVDQGLCVRVADFGFSRLRDRNASKGYTRSTTGPIKWMAPEAMRKRAYSVKSDVFSFGVLLWEIFTGTPPWKGEENLDVLFRVCGGERLDV 991          
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Match: A0A2R5G438_9STRA (Protein kinase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G438_9STRA)

HSP 1 Score: 197 bits (502), Expect = 5.140e-55
Identity = 92/183 (50.27%), Postives = 127/183 (69.40%), Query Frame = 2
Query:   29 EMRHEARMLAKVCNHNCVVQFVGVLFRPTPSVVTMFMENGSVEGLLVSGDSPAKKELVG-----RMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGNENLDVAFRVCSGERMTV 562
            +++HEA M+++V NH  +V FVGVL  P P VVT  M  GSVE +LV      K++ +      +M ++AA GV+HLH EGV+HRD+ASRNLL+D+   V+++DFGF+R+K    S+GYT   +GPIKW +PEAMR R +SE +D FSFGV L+E+     PWEG E++DV +R+C GER  V
Sbjct:  746 DLKHEAAMMSRVSNHENIVPFVGVLLTPRPCVVTKLMRGGSVEDMLVVPGPLYKRKTIPEARILQMLVDAAAGVLHLHSEGVIHRDIASRNLLVDENLRVKVADFGFARIKEINRSKGYTSQHVGPIKWMAPEAMRYRRFSEQTDVFSFGVTLFEVLVGKRPWEGIESMDVVYRICDGERQLV 928          
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Match: A0A7S2WL09_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL09_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.210e-53
Identity = 93/193 (48.19%), Postives = 132/193 (68.39%), Query Frame = 2
Query:   26 EEMRHEARMLAKVCNHNCVVQFVGVLFRPTPSVVTMFMENGSVEGLLVS-----------GDSPAKKELVGRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGNENLDVAFRVC-SGERMTVRE 568
            EE+R EA +LA+VC+H  VV+FVG++     +VV  FM NGS+E LL+            GD   +   + RMA+EAAKG+ HLH E V+HRD+A+RN+L+D+  HVR++DFGF+R K    S+ YT+S++ P+KW+SPEA++ + YSEASD FSFGV LYE+  +S PW  + N++V   VC +G RM + E
Sbjct:   63 EELRREASLLARVCHHQFVVEFVGIVPEKL-AVVMRFMHNGSLEDLLIRHGGRRADEILPGDRNLRAREITRMALEAAKGISHLHSEQVIHRDIAARNILVDEHLHVRVADFGFARTKETGRSKCYTQSEILPVKWSSPEAIKWKHYSEASDVFSFGVFLYELVVQSAPWPNHSNMEVVCLVCGTGARMGLPE 254          
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Match: A0A7S0PGQ5_CAFRO (Non-specific protein-tyrosine kinase (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PGQ5_CAFRO)

HSP 1 Score: 179 bits (454), Expect = 4.990e-52
Identity = 96/196 (48.98%), Postives = 126/196 (64.29%), Query Frame = 2
Query:    8 DLMDGQE----EMRHEARMLAKVCNHNCVVQFVGVLFRPTPSVVTMFMENGSVEGLLVSGDSPAKKEL-----VGRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRK--RCYSEASDAFSFGVVLYEMFARSPPWEGNENLDVAFRVCSGERMTV 562
            DL D  E    E+R EA M+A+V +H  +V+FVGV+ RP  +VVT FM  GS+E LLVS      + L     V  MA  AA G++HLH E V+HRD+A+RNLL D    VR+ DFGF+R+K+   SRGYT +  GPI+W +PEA+    + +SE SD +SFGV L E+F   PPW+G E L VA +VCSG R  +
Sbjct:   46 DLGDVSEAVLAELRQEADMMARVAHHEHIVRFVGVIERPFQAVVTEFMARGSLERLLVSPGPGNLRHLFTLRDVTAMACGAAAGILHLHEERVIHRDIAARNLLCDHSDRVRVCDFGFARLKQSSQSRGYTSATTGPIRWLAPEALMTSGKTFSEKSDVWSFGVTLTELFTGQPPWKGVETLQVAIQVCSGARQAL 241          
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Match: A0A5A8EFA3_CAFRO (Non-specific protein-tyrosine kinase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EFA3_CAFRO)

HSP 1 Score: 179 bits (454), Expect = 1.410e-48
Identity = 96/196 (48.98%), Postives = 126/196 (64.29%), Query Frame = 2
Query:    8 DLMDGQE----EMRHEARMLAKVCNHNCVVQFVGVLFRPTPSVVTMFMENGSVEGLLVSGDSPAKKEL-----VGRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRK--RCYSEASDAFSFGVVLYEMFARSPPWEGNENLDVAFRVCSGERMTV 562
            DL D  E    E+R EA M+A+V +H  +V+FVGV+ RP  +VVT FM  GS+E LLVS      + L     V  MA  AA G++HLH E V+HRD+A+RNLL D    VR+ DFGF+R+K+   SRGYT +  GPI+W +PEA+    + +SE SD +SFGV L E+F   PPW+G E L VA +VCSG R  +
Sbjct: 1172 DLGDVSEAVLAELRQEADMMARVAHHEHIVRFVGVIERPFQAVVTEFMARGSLERLLVSPGPGNLRHLFTLRDVTAMACGAAAGILHLHEERVIHRDIAARNLLCDHSDRVRVCDFGFARLKQSSQSRGYTSATTGPIRWLAPEALMTSGKTFSEKSDVWSFGVTLTELFTGQPPWKGVETLQVAIQVCSGARQAL 1367          
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Match: A0A7S4D4E3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4E3_HETAK)

HSP 1 Score: 159 bits (403), Expect = 5.280e-47
Identity = 72/96 (75.00%), Postives = 84/96 (87.50%), Query Frame = 2
Query:  275 ASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGNENLDVAFRVCSGERMTV 562
            A+RNLL+DD   VR+SDFGF+RVK  CASRGYTR++MGPIKWT+PEAMR++ YSE+SD FSFGVVL+EMFAR PPW G ENLDVA RVCSGERM +
Sbjct:    1 AARNLLVDDHLRVRVSDFGFARVKDACASRGYTRTEMGPIKWTAPEAMRRKVYSESSDVFSFGVVLFEMFAREPPWRGLENLDVAVRVCSGERMPL 96          
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Match: L8GMP4_ACACA (Thioredoxin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GMP4_ACACA)

HSP 1 Score: 152 bits (383), Expect = 2.790e-39
Identity = 75/182 (41.21%), Postives = 113/182 (62.09%), Query Frame = 2
Query:   29 EMRHEARMLAKVCNHNCVVQFVGVLFRPTP----SVVTMFMENGSVEGLLVSGDSPAKKELVGRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGNENLDVAFRVCSGERMTV 562
            E+R EA+M+ ++ NH  +V+FVG + R       ++VT F   GS+  LLV          + RMA +AA G++HLH+E +VHRD+A+RN+L+   + V +SDFG +R +        T+ + GP+ W +PEA++ R YSEA+DAFSFGV+L+EM AR  PW G E + +   V S  R+ +
Sbjct:  341 ELRTEAQMMERLSNHPGIVKFVGAITRGDDGANFALVTEFCPRGSLYDLLVKNKKKLPLITLVRMARDAASGILHLHKEHIVHRDIAARNILVGQNYEVYVSDFGLARAQEADGQVATTKQNFGPLAWMAPEALKSREYSEATDAFSFGVLLWEMMARKRPWAGVEPVQIITSVTSNTRLRI 522          
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Match: L8HCK5_ACACA (MAP kinase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCK5_ACACA)

HSP 1 Score: 147 bits (371), Expect = 1.950e-37
Identity = 77/195 (39.49%), Postives = 114/195 (58.46%), Query Frame = 2
Query:   29 EMRHEARMLAKVCNHNCVVQFVGVLFR----------PTP-------SVVTMFMENGSVEGLLVSGDSPAKKELVGRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGNENLDVAFRVCSGERMTV 562
            E+R EA+M+ ++ NH  +V+FVG + R          P P       ++VT F   GS+  LLV          + RMA +AA G++HLH+E +VHRD+A+RN+L+   + V ++DFG +R +        T+ + GPI W +PEA+R R YSEA+DAFSFGV+L+EM  R  PW G E + V   V +  R+ +
Sbjct:  574 ELRMEAQMMERLSNHPNIVKFVGAITRGEYSDLAHVEPAPRNEGANFALVTEFCSRGSLLDLLVKKKKKLPLITLVRMARDAASGILHLHKEHIVHRDIAARNILVGQNYEVYVADFGLARAQEAEGQVATTKQNFGPISWMAPEALRSREYSEATDAFSFGVLLWEMVERKRPWAGMEAVQVVTAVTTNTRLKI 768          
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Match: L8HA88_ACACA (Protein kinase domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HA88_ACACA)

HSP 1 Score: 146 bits (369), Expect = 3.360e-37
Identity = 73/182 (40.11%), Postives = 111/182 (60.99%), Query Frame = 2
Query:   29 EMRHEARMLAKVCNHNCVVQFVGVLFRPTP----SVVTMFMENGSVEGLLVSGDSPAKKELVGRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGNENLDVAFRVCSGERMTV 562
            E+R EA+M+ ++ NH  +V+FVG + +       ++VT F   GS+  LLV          + RMA +AA GV+HLH+E +VHRDLA+RN+L+   + V ++DFG +RV+        T+ + GPI W +PE ++ R YSEA+DAFSFGV+L+EM  +  PW G E + +   V    R+ +
Sbjct:  403 ELRSEAQMMERLSNHPSIVKFVGAITKGEEGSNFALVTEFCPRGSLYDLLVKKKKKLPLITLVRMARDAASGVLHLHKEHIVHRDLAARNILVGQNYEVYVADFGLARVQAAEGQVATTKQNFGPIAWMAPEGLKAREYSEATDAFSFGVLLWEMMVKKRPWAGVEPVQIITSVVGNTRLRI 584          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6451.15122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB42_ECTSI1.620e-11192.43Protein tyrosine kinase n=1 Tax=Ectocarpus silicul... [more]
A0A813CZ72_9DINO9.370e-6355.74Non-specific protein-tyrosine kinase n=1 Tax=Symbi... [more]
A0A2R5G438_9STRA5.140e-5550.27Protein kinase, putative n=1 Tax=Hondaea fermental... [more]
A0A7S2WL09_9STRA1.210e-5348.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0PGQ5_CAFRO4.990e-5248.98Non-specific protein-tyrosine kinase (Fragment) n=... [more]
A0A5A8EFA3_CAFRO1.410e-4848.98Non-specific protein-tyrosine kinase n=4 Tax=Cafet... [more]
A0A7S4D4E3_HETAK5.280e-4775.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
L8GMP4_ACACA2.790e-3941.21Thioredoxin, putative n=1 Tax=Acanthamoeba castell... [more]
L8HCK5_ACACA1.950e-3739.49MAP kinase, putative n=1 Tax=Acanthamoeba castella... [more]
L8HA88_ACACA3.360e-3740.11Protein kinase domain containing protein n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6451contigL-elsbetiae_contig6451:2406..4590 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score351.3
Seed ortholog evalue2.9e-94
Seed eggNOG ortholog2880.D8LB42
Preferred nameRIPK3
KEGG koko:K08332,ko:K08841,ko:K08847
KEGG Pathwayko04217,ko04621,ko04623,ko04668,map04217,map04621,map04623,map04668
Hectar predicted targeting categoryother localisation
GOsGO:0001775,GO:0001776,GO:0001817,GO:0001910,GO:0001914,GO:0001932,GO:0001934,GO:0002260,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002685,GO:0002691,GO:0002694,GO:0002697,GO:0002703,GO:0002706,GO:0002709,GO:0002819,GO:0002822,GO:0003674,GO:0003712,GO:0003713,GO:0003824,GO:0004672,GO:0004674,GO:0004704,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0007154,GO:0007165,GO:0007249,GO:0007275,GO:0008150,GO:0008152,GO:0008219,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010921,GO:0010922,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0012501,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030098,GO:0030154,GO:0030217,GO:0030234,GO:0030334,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031341,GO:0031399,GO:0031401,GO:0032147,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032649,GO:0032879,GO:0032944,GO:0033077,GO:0033674,GO:0035303,GO:0035306,GO:0035556,GO:0036211,GO:0038061,GO:0040012,GO:0042110,GO:0042127,GO:0042129,GO:0042325,GO:0042327,GO:0042592,GO:0042802,GO:0042981,GO:0043029,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043170,GO:0043412,GO:0043549,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045321,GO:0045859,GO:0045860,GO:0045935,GO:0045937,GO:0046006,GO:0046649,GO:0046777,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048535,GO:0048536,GO:0048538,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048872,GO:0050670,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0050863,GO:0050865,GO:0050896,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051246,GO:0051247,GO:0051249,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051270,GO:0051291,GO:0051336,GO:0051338,GO:0051340,GO:0051341,GO:0051345,GO:0051347,GO:0051351,GO:0051353,GO:0051716,GO:0060255,GO:0060544,GO:0060545,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070228,GO:0070232,GO:0070235,GO:0070265,GO:0070266,GO:0070663,GO:0071704,GO:0071840,GO:0080090,GO:0097190,GO:0097300,GO:0097435,GO:0098772,GO:0140096,GO:0140110,GO:1901564,GO:1902531,GO:1902533,GO:1902680,GO:1903506,GO:1903508,GO:1990000,GO:2000106,GO:2000112,GO:2000145,GO:2000377,GO:2000379,GO:2000401,GO:2000404,GO:2000407,GO:2000449,GO:2000452,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0515@1,COG0666@1,KOG0192@2759,KOG4177@2759
EC2.7.11.1,2.7.12.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
Ec32 ortholog descriptionprotein tyrosine kinase
Ec32 orthologEc-27_005300.1
Exons3
Model size589
Cds size576
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6451.15122.1prot_L-elsbetiae_contig6451.15122.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6451 2406..4577 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816711.717098-CDS-L-elsbetiae_contig6451:2405..27451622816711.717098-CDS-L-elsbetiae_contig6451:2405..2745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6451 2406..2745 -
1691683758.096091-CDS-L-elsbetiae_contig6451:2405..27451691683758.096091-CDS-L-elsbetiae_contig6451:2405..2745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6451 2406..2745 -
1622816711.7274883-CDS-L-elsbetiae_contig6451:3824..40111622816711.7274883-CDS-L-elsbetiae_contig6451:3824..4011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6451 3825..4011 -
1691683758.1109066-CDS-L-elsbetiae_contig6451:3824..40111691683758.1109066-CDS-L-elsbetiae_contig6451:3824..4011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6451 3825..4011 -
1622816711.7377465-CDS-L-elsbetiae_contig6451:4528..45771622816711.7377465-CDS-L-elsbetiae_contig6451:4528..4577Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6451 4529..4577 -
1691683758.1229494-CDS-L-elsbetiae_contig6451:4528..45771691683758.1229494-CDS-L-elsbetiae_contig6451:4528..4577Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6451 4529..4577 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816711.748348-UTR-L-elsbetiae_contig6451:4577..45901622816711.748348-UTR-L-elsbetiae_contig6451:4577..4590Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6451 4578..4590 -
1691683758.1358004-UTR-L-elsbetiae_contig6451:4577..45901691683758.1358004-UTR-L-elsbetiae_contig6451:4577..4590Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6451 4578..4590 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6451.15122.1

>prot_L-elsbetiae_contig6451.15122.1 ID=prot_L-elsbetiae_contig6451.15122.1|Name=mRNA_L-elsbetiae_contig6451.15122.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp
MDGQEEMRHEARMLAKVCNHNCVVQFVGVLFRPTPSVVTMFMENGSVEGL
LVSGDSPAKKELVGRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHV
RISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFG
VVLYEMFARSPPWEGNENLDVAFRVCSGERMTVREGETRKE*
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mRNA from alignment at L-elsbetiae_contig6451:2406..4590-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6451.15122.1 ID=mRNA_L-elsbetiae_contig6451.15122.1|Name=mRNA_L-elsbetiae_contig6451.15122.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2185bp|location=Sequence derived from alignment at L-elsbetiae_contig6451:2406..4590- (Laminarionema elsbetiae ELsaHSoW15)
CGCGGGCGATTTGATGGACGGCCAAGAAGAGATGAGGCACGAGGCGAGGA TGCTAGCGAAAGGTAGGTAGGTGGGTGCTTGGGTGAGAAGCCCGGCGTTC GCCCCTCTCGGTCCAACGGGCTTGGTTGCCCGCTTTTGCTTGCTCGCGCA GAACACGACCAACACTTGGGCGCGTCCGTGCCCACAGAGAAAGACCTTCA TATTGATTTATGGTGACTGGTTGTGTTGTTGGTACGTTTTGTTTCTATGA AACATGAAAAGTGTTGTGTAATCATTTTTCACCTTACATAGGATCACGGC ACGATGTGCATATCAGAGGACACTTTTAAATGTATTCCTCGGCAGCAGCG GGAACCCAACGCCGGCCTTTGCCTGTTTCCGCTGGAAGATCCCCTGCCAC CTCAATTGTCGCGTCTGCTGCGGTCACTACTGCTGTTGTCGCCGGTCGCT CTCTCGCGGGAGCGCACTTGGGTTGAATGGGTAACTCAAACACTGCTGCT CTTGACAGCAATATGGTCCCGCGTACGTGCGTTCCCGTGTGCCCCGAACC TCCGGTGTGCCCCGAATCTATGTACGCAGTGTGTAATCACAACTGCGTGG TGCAGTTCGTCGGGGTGCTCTTTCGGCCGACCCCTTCCGTGGTGACGATG TTCATGGAGAACGGATCCGTGGAGGGTTTGCTTGTCTCCGGCGACAGTCC CGCCAAGAAGGAGCTAGTGGGGCGAATGGCGATCGAGGCGGCCAAGGGGG TCATCCACCTTCACAGGTTAGGTGTAGGCCTGTATAGGTTAGATGTAGAC ACCCCCATAGGATAGATGCACCTTTCGCAGGTTAGATTCACCTTCACAGG TGAGATGTAGGCCTTTATTATAGATTAGATATAAACACCTCCAGGATAGA GTTGTAACTTTGCAGGCAAGATGGCATGCAGCGAAGAATGATGCATACCT TGGATCGCGAGAGTTGACCCTGGTAAGTTTAAGGGCGGTAGAATCGTAGG CGTCTCTACTGTTGTGCCGTGAACACCCTTGCGAGCTGAAAACCACGTTT TTATGTCCCAGGCTCGCGGTGAGTGTGTGGGGGTCAACTTGTCACATGAG GTGGGAGATGTGGGGGCGGGAGGGGCTTGTCCGCAGAAAATCCTTGATGT GCATCCATATGTGGGAGATGGGGATCCACAAAAAAGACCCAAGGCCGAGA AAAGAGCTACCATAGGTGACAAAATATACCACACACCCTGGACCGACTTT TTAGAGCTCCATTACTCCGTAACGAATAGGGTGCTAGCACCAACCGACGC ACTTTCGGACATCGCTCGACTAGACCTTTCCAGCGCCACCCCCTTTTGGC TGGCACTCTGCTTGCTGAGGAGAAATCGCGCTTTGAAAATCTGTCGAGGG GGTGTGGTATCTTGTGTCACCTACGGCAGTCAGTTACTGGCACGTGCACT TACATATCGCGAAAGTACAATAGTTGGGTGTTGGTGTTGTTTGTTGGCAG ATAGATGGCCACAATAGGACAACAAATAAACGGGTCGGGGGTCACCCTGC TCGCGATAAAAACATGCCAGGCAGGCACTGCAGGAGCTCCTCCCCCCCCT CCTATGTGACCCCGGTTGGGCCGTCTAGCTAGTCGTAGTGGAGGAAGGGG GGACAGTGGGGCAGGCGAAGAATAAGCCAATAATGGGAGGGGAAAAAACA AAAACACTACTTTCTCGCACGCTAAACTCGAGAAACGAAACCAATCTTCC ACGCCGCGCATCCGTCCATCCTACTCGATCTCCTCCACGAAACATGGACC ACCAACTGGATGGGCTGGGGTCACCGCGACTCGCGGCTCTGGCAGGGAGG GGGTGGTCCACCGCGACCTTGCCTCTCGAAACCTCCTGCTGGACGACGGG TTCCACGTCCGTATCTCGGACTTCGGGTTCAGCCGCGTCAAGCGCGAGTG CGCCAGCCGAGGGTACACCCGGAGCGACATGGGCCCGATAAAGTGGACGT CCCCCGAGGCCATGCGGAAGCGGTGCTACTCGGAGGCGTCGGACGCCTTC TCGTTTGGGGTCGTCCTGTACGAGATGTTCGCGAGGAGCCCGCCGTGGGA GGGCAACGAGAACCTCGACGTGGCGTTCCGGGTGTGCTCAGGGGAGAGGA TGACGGTGAGGGAAGGGGAGACCCGGAAGGAGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6451:2406..4590-

>mRNA_L-elsbetiae_contig6451.15122.1 ID=mRNA_L-elsbetiae_contig6451.15122.1|Name=mRNA_L-elsbetiae_contig6451.15122.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1152bp|location=Sequence derived from alignment at L-elsbetiae_contig6451:2406..4590- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGGCCAAGAAGAGATGAGGCACGAGGCGAGGATGCTAGCGAAAGA
TGGACGGCCAAGAAGAGATGAGGCACGAGGCGAGGATGCTAGCGAAAGTG
TGTAATCACAACTGCGTGGTGCAGTTCGTCGGGGTGCTCTTTCGGCCGAC
CCCTTCCGTGGTGACGATGTTCATGGAGAACGGATCCGTGGAGGGTTTGC
TTGTCTCCGGCGACAGTCCCGCCAAGAAGGAGCTAGTGGGGCGAATGGCG
ATCGAGGCGGCCAAGGGGGTCATCCACCTTCACAGTGTGTAATCACAACT
GCGTGGTGCAGTTCGTCGGGGTGCTCTTTCGGCCGACCCCTTCCGTGGTG
ACGATGTTCATGGAGAACGGATCCGTGGAGGGTTTGCTTGTCTCCGGCGA
CAGTCCCGCCAAGAAGGAGCTAGTGGGGCGAATGGCGATCGAGGCGGCCA
AGGGGGTCATCCACCTTCACAGGGAGGGGGTGGTCCACCGCGACCTTGCC
TCTCGAAACCTCCTGCTGGACGACGGGTTCCACGTCCGTATCTCGGACTT
CGGGTTCAGCCGCGTCAAGCGCGAGTGCGCCAGCCGAGGGTACACCCGGA
GCGACATGGGCCCGATAAAGTGGACGTCCCCCGAGGCCATGCGGAAGCGG
TGCTACTCGGAGGCGTCGGACGCCTTCTCGTTTGGGGTCGTCCTGTACGA
GATGTTCGCGAGGAGCCCGCCGTGGGAGGGCAACGAGAACCTCGACGTGG
CGTTCCGGGTGTGCTCAGGGGAGAGGATGACGGTGAGGGAAGGGGAGACC
CGGAAGGAGTAGGGAGGGGGTGGTCCACCGCGACCTTGCCTCTCGAAACC
TCCTGCTGGACGACGGGTTCCACGTCCGTATCTCGGACTTCGGGTTCAGC
CGCGTCAAGCGCGAGTGCGCCAGCCGAGGGTACACCCGGAGCGACATGGG
CCCGATAAAGTGGACGTCCCCCGAGGCCATGCGGAAGCGGTGCTACTCGG
AGGCGTCGGACGCCTTCTCGTTTGGGGTCGTCCTGTACGAGATGTTCGCG
AGGAGCCCGCCGTGGGAGGGCAACGAGAACCTCGACGTGGCGTTCCGGGT
GTGCTCAGGGGAGAGGATGACGGTGAGGGAAGGGGAGACCCGGAAGGAGT
AG
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