mRNA_L-elsbetiae_contig644.15116.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig644.15116.1
Unique NamemRNA_L-elsbetiae_contig644.15116.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Match: D8LU35_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU35_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 1.900e-136
Identity = 244/469 (52.03%), Postives = 295/469 (62.90%), Query Frame = 1 
Query:    1 VCSRPFPQHAIESHAWGCMPP-TDDLEVAAAPKRSPIGAGRGKRAIPA------NKEQSPARITDTRRASPSLPSRGSEIDLVSTASAASSTPEVPSSNMTVSRSGDVMQARLMAAGKRASKAERELKIVPPAWPIERIEDIFPAKKADSLLASMLHASRDWTSRPWFNAASGIPGMTHSRSCMYRISTAQDTTNXXXXXXXXNTAGTDRNQTGSAQTPGQARQRGGSRPTA--------DPDGVTESDSGDDEGPKLAPRELLEVVPLVVEVVRRCRQRRRAKEGLGGHEGSDWNPNFCICHIYDNHRNYLGAHSDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSKAA-AGSGSEGTKKLLDMPHNSAIVMWAGCQERYKHAVPNMTKGVGTHPIAGTNRISITLRERKEALPRFLLPVPNCCCGVPAELISRVLPNGKVHYLFRCDRAQGREQCGFTLSKGPRR 1359
            +CSR FPQHAIESHAW C PP  DD  ++  P  +    GR      A      N  +  AR   T    P   + G+ +      ++  +    P      S   + MQ  LM  GKRA KAERE KI+P AWP+E +ED+ P  KA+ LLA ML  SRDWTS+ WFNA +G+ G THSRS  YRI  A D+                  ++    + G  +Q   S P A        D D     + G D+   +AP ELL+VVP+VVEVVRR RQR+R ++GL G EG  WNPN+CICH+YD+HR++LGAHSDTLS IGP AIVVG+SLGAKRVF+V++ LP G K   AGSGSEG KK LDMPHN AIVMW GCQERYKH VP M+KGVGTHP++GT RISITLRERKE+LP  LLPVP+C C VPA L +RV  NG+V YL++CDR QG  QCGF LSKGP R
Sbjct:    1 MCSRMFPQHAIESHAWECRPPPADDGAMSTVPSST----GRASATEAACNTLLDNSGEFQARHHTT-ELQPKATAAGTYLIPPEGGNSNCADRGAPKQVPQESEGKNAMQT-LMEGGKRAVKAEREEKIIPRAWPVECVEDLLPRDKAEGLLARMLQLSRDWTSQTWFNA-NGLEGRTHSRSRAYRIPAAGDS------------------RSSGRASEGAMKQESESDPEAQDKWKVSTDEDRRATHEEGMDKSLAVAPAELLDVVPVVVEVVRR-RQRQRMEDGLAGSEGLRWNPNYCICHVYDDHRSHLGAHSDTLSNIGPRAIVVGVSLGAKRVFVVEETLPRGVKPPPAGSGSEGGKKSLDMPHNCAIVMWGGCQERYKHGVPVMSKGVGTHPMSGTKRISITLRERKESLPSCLLPVPDCRCRVPASLKARVKRNGQVGYLYQCDRGQG--QCGFWLSKGPLR 441
[Close]
BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Match: A0A6H5KU93_9PHAE (2OG-FeII_Oxy_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU93_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 5.450e-98
Identity = 181/363 (49.86%), Postives = 214/363 (58.95%), Query Frame = 1 
Query:  442 MLHASRDWTSRPWFNAASGIPGMTHSRSCMYRISTAQDTTNXXXXXXXXNTAGTDRNQTGSAQTPGQARQRGGSRPTA--------DPDGVTESDSGDDEGPKLAPRELLEVVPLVVEVVRRCRQRRRAKEGLGGHEGSDWNPNFCICHIYDNHRNYLGAHSDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSK-AAAGSGSEGTKKL--------------------------------------------------LDMPHNSAIVMWAGCQERYKHAVPNMTKGVGTHPIAGTNRISITLRERKEALPRFLLPVPNCCCGVPAELISRVLPNGKVHYLFRCDRAQGREQCGFTLSKGP 1353
            ML  SRDWTS+ WFNA +G+ G THSRS  YRI  A D                   ++    + G  +Q+  S P A        D D     + G D+   +AP ELL+VVPL+VEVVRR          L G EG  WNPN+CICH+YD+HRN+LGAHSDTLS IGP AIVVG+SLGAKRVF+V++ LP G K + AGSGSEG KK+                                                  LDMPHN AIVMWAGCQERYKH+VP M+KGVGTHP++GT RISITLRERKE+LP  LLPVP+C C VPA L +RV  NG+V YL++CDR QG  QCGF LSKGP
Sbjct:    1 MLQLSRDWTSQTWFNA-NGLEGRTHSRSRAYRIPNASDV------------------RSSGRASEGAMKQKWESGPEAQDKQEVSTDEDRRATHEEGMDKSLAVAPAELLDVVPLIVEVVRR----------LAGSEGLRWNPNYCICHVYDDHRNHLGAHSDTLSNIGPRAIVVGVSLGAKRVFVVEETLPRGVKHSPAGSGSEGGKKVMVGHVCVAAAGSRTPAAAVYASQLARCIPFHFLPAPFRAARARPRTVPQSLDMPHNCAIVMWAGCQERYKHSVPVMSKGVGTHPMSGTKRISITLRERKESLPACLLPVPDCRCRVPASLKARVKRNGQVEYLYQCDRGQG--QCGFWLSKGP 332
[Close]
BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Match: A0A7S1A3Y5_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A3Y5_NOCSC)

HSP 1 Score: 107 bits (266), Expect = 3.700e-23
Identity = 71/190 (37.37%), Postives = 96/190 (50.53%), Query Frame = 1 
Query:  769 EVVRRCRQRRRAKEGLGGHEGSDWNPNFCICHIYDNHRNYLGAHSDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSKAAAGSGSEGTKKLLDMPHNSAIVMWAGCQERYKHAVPNMTKGV-GTHPIAGTNRISITLRERKEALPRFLLPVPNCCCGVPAELISRVLPNGKVHYLFRCDRAQGREQCGF 1335
            EVVR CR R            S W+P++ + + Y + R+ +G HSD LS +GP  I+VGLSLGA R+F +++    GSK             + MPHNSA+VMW  CQE ++H+VP     V   H  AG  RIS+T R  +  L    +   NC CG    L  +   +GK  Y   C      +QCGF
Sbjct:    6 EVVRHCRPR------------SQWSPSYALANCYRSGRDTVGFHSDFLSTLGPRPIIVGLSLGATRLFRLRQ----GSKTIT----------IPMPHNSAVVMWDDCQEEWQHSVPRQADSVIDAHRTAGRTRISLTFRMARPELASRRI---NCKCGRSTVLRCK---SGK--YYLACS-PMTTKQCGF 160
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BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Match: A0A8J5BE08_9ASCO (Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 3 n=1 Tax=Yarrowia sp. B02 TaxID=2768839 RepID=A0A8J5BE08_9ASCO)

HSP 1 Score: 104 bits (259), Expect = 5.200e-21
Identity = 63/184 (34.24%), Postives = 93/184 (50.54%), Query Frame = 1 
Query:  793 RRRAKEGLGGHEGSDWNPNFCICHIYDNHRNYLGAHSDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSKAAAGSGSEGTKKLLDMPHNSAIVMWAGCQERYKHAV-PNMTKGVGTHPIAGTNRISITLRE-RKEALPRFLLPVPNCCCGVPAEL--ISRVLPNGKVHYLFRCDRAQGREQCG 1332
            R+  +EG      S W  + CI + Y +    +G HSD L+ IGP  ++  L+LG++R+F ++  LP         G   T  +L +PHNS ++M AGCQE YKH++ P   K +G H  AG  R S+T R  +KE  P     +P C CG P  L  + +     K  Y + C +    + CG
Sbjct:  185 RKTEREGT-----SQWLSDACIANFYADESQSVGFHSDQLTYIGPRPVIAALTLGSERIFRLKGVLP--------DGDRRTYNVL-LPHNSLMIMHAGCQEAYKHSIIPVQAKQIGLHERAGKARFSLTFRHYKKEFTPN---KIPQCKCGEPMILKPVFKKAAGQKSDYFWTCGQTYQGKGCG 351
[Close]
BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Match: A0A642VB26_9ASCO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642VB26_9ASCO)

HSP 1 Score: 102 bits (255), Expect = 2.120e-20
Identity = 58/193 (30.05%), Postives = 95/193 (49.22%), Query Frame = 1 
Query:  736 RELLEVVPLVVEVVRRCRQRRRAKEGLGGHE-GSDWNPNFCICHIYDNHRNYLGAHSDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSKAAAGSGSEGTKKLLDMPHNSAIVMWAGCQERYKHAVPNMTKGVGTHPIAGTNRISITLRERKEALPRFLLPVPNCCCGVPAELISRVLPNGKVHYLFRCDRA 1311
            +EL+E   +V ++V         K GL  H+   +W     +C+ Y+     +G HSD ++ +GP  ++  +SLGA R F ++ +             E +   + +PHNS ++M AGCQE YKH++   T  +  HPI+GT RI+IT R   +      LP   C C  P  L + +  +    Y+++C  A
Sbjct:  174 KELVEARNIVQDIV----NEEIIKRGLAKHQYQGEWVSEIAVCNKYEGPEETVGYHSDQMTHLGPHCVIASVSLGATREFRLKDR----------HDREKSTISIHVPHNSMVIMHAGCQEEYKHSLVPTTDAITPHPISGTTRINITFRMYLDDFKTEKLP--RCECNYPMLLRTTIAKDHNYKYIWQCSGA 350
[Close]
BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Match: A0A371C7W8_YARLL (Fe2OG dioxygenase domain-containing protein n=3 Tax=Yarrowia lipolytica TaxID=4952 RepID=A0A371C7W8_YARLL)

HSP 1 Score: 102 bits (254), Expect = 2.840e-20
Identity = 63/184 (34.24%), Postives = 92/184 (50.00%), Query Frame = 1 
Query:  793 RRRAKEGLGGHEGSDWNPNFCICHIYDNHRNYLGAHSDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSKAAAGSGSEGTKKLLDMPHNSAIVMWAGCQERYKHAV-PNMTKGVGTHPIAGTNRISITLRE-RKEALPRFLLPVPNCCCGVPAEL--ISRVLPNGKVHYLFRCDRAQGREQCG 1332
            R   KEG      ++W  + CI + Y +    +G HSD L+ IGP  ++  L+LG++R+F +        K A   G   T  +L +PHNS ++M AGCQE YKH++ P   K +G H  AG  R S+T R  +KE  P     +P C CG P  L  + +     K  Y + C +    + CG
Sbjct:  196 RSTNKEGT-----AEWLSDACIANYYADESQSVGFHSDQLTYIGPRPVIAALTLGSERIFRL--------KGACPDGDRRTYNIL-LPHNSLMIMHAGCQEAYKHSIIPVQAKQIGLHERAGKVRFSLTFRHYKKEFTPN---KIPQCKCGEPMILKPVFKKAAGQKSGYFWTCGQTYQGKGCG 362
[Close]
BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Match: R1BFI0_EMIHU (Fe2OG dioxygenase domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BFI0_EMIHU)

HSP 1 Score: 99.0 bits (245), Expect = 4.150e-19
Identity = 65/178 (36.52%), Postives = 87/178 (48.88%), Query Frame = 1 
Query:  838 WNPNFCICHIYDNHRNYLGAHSDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSKAAAGSGSEGTKKLLDMPHNSAIVMWAGCQERYKHAVPNMTKG-VGTHPIAGTNRISITLRERKEALPRFLLPVPNCCCGVPAELISRVL----------PNGKVHYLFRCDRAQGREQCGFT 1338
            W P   + + Y +H++ +GAHSD L  +GP  I+VGL+LGA R F++          A+ +    T   + MPHNS +VMW  CQER+ HAVP   +G V  H + G  R S+T R  + A     +  P C C  PAEL  R            P G  H   R D    R  CGF+
Sbjct:  178 WLPTLALGNRYADHQDSVGAHSDYLGELGPRPIIVGLALGACRDFVL----------ASRAADPPTTVRIPMPHNSIVVMWGECQERWDHAVPACGEGAVLRHALVGPVRYSLTFRMSRAAE----ISRPKCRCDKPAELKWRGTGYRWCCAGHAPRGDEH--TRPDAPPPRHPCGFS 339
[Close]
BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Match: A0A6G1I2L4_9PEZI (GRF zinc finger domain-containing protein n=1 Tax=Trichodelitschia bisporula TaxID=703511 RepID=A0A6G1I2L4_9PEZI)

HSP 1 Score: 99.8 bits (247), Expect = 6.690e-19
Identity = 68/211 (32.23%), Postives = 105/211 (49.76%), Query Frame = 1 
Query:  754 VPLVVEVVRRCRQRRRAKEGLGGHE-----GSDWNPNFCICHIYDNHRNYLGAHSDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSKAAAGSGSEGTKKL-------LDMPHNSAIVMWAGCQERYKHAV-PNMTKGVGTHPIAGTNRISITLRERKEAL-PRFLLPVPNCCCGVPAEL--ISRVLPN-GKVHYLFRCDRAQGREQCGF 1335
            V  +VE       ++R     GG +       +W PN    + YD     +G HSDTL+ +GP AI+  LSLG +R F V+K +      A   G+E  ++        + +PHNS +VM A  QE +KH++ P  T  +  HP+AG  R++IT R  +++L PR     P C CGVP  L  + R   N G+  ++     + G++ C +
Sbjct:  210 VSAIVEATVNTEVKKRIATVYGGKKLQYQSPHEWKPNAAFVNCYDGPGENVGYHSDTLTYLGPRAIIGSLSLGVEREFRVRKIM------ARDDGTEDDERADAQGQIAIHLPHNSLLVMHAEMQEEWKHSIAPAQT--IVPHPLAGQKRLNITYRHYRDSLNPRL---TPRCSCGVPTVLRCVKRTAGNRGRYMWMCYAGYSPGKKGCTY 409
[Close]
BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Match: A0A7S3PFH9_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PFH9_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 5.070e-18
Identity = 58/167 (34.73%), Postives = 91/167 (54.49%), Query Frame = 1 
Query:  835 DWNPNFCICHIYDNHRNYLGAHSDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSKAAAGSGSEG--TKKLLDMPHNSAIVMWAGCQERYKHAVPNMTKG-VGTHPIAGTNRISITLRERKEALPRFLLPVPNCCCGVPAELISRVLPNGKVHYLFRCDRAQGREQ 1326
            +W P + + + YDN    +G HSD LS +GP  I+VGLS+GA R F + + +P   ++     S+   +   L +PHNSA++MW  CQE++KHA+       + ++  +G  R S+T R R++ +P        C CG P   +S    NGK  Y+  C +  GRE+
Sbjct:  181 NWKPTYVLVNRYDNGNQVVGFHSDHLSELGPRPIIVGLSVGATRRFDLARTIPEIRQSNNEESSDTCCSGAQLYLPHNSALIMWDDCQEKWKHAIQKCANHKIFSNKESGLVRYSLTFRMRRDDMPSL----GTCYCGKP---VSLKCVNGK--YVVMC-KPYGREK 337
[Close]
BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Match: Q6BNI2_DEBHA (DEHA2E21494p n=1 Tax=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) TaxID=284592 RepID=Q6BNI2_DEBHA)

HSP 1 Score: 95.1 bits (235), Expect = 1.270e-17
Identity = 53/168 (31.55%), Postives = 85/168 (50.60%), Query Frame = 1 
Query:  838 WNPNFCICHIYDNHRNYLGAHSDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSKAAAGSGSEGTKKLLDMPHNSAIVMWAGCQERYKHAVPNMTKGVGTHPIAGTNRISITLRERKEALPRFLLPVPNCCCGVPAEL---ISRVLPNGKVHYLFRCDRAQGREQCG 1332
            WN + C+ + Y++  N L  HSD +S IGP   +V +SLGA R F ++K          G+       ++ +PHNS ++M AGCQE Y+H+V +M   +  +PI+G  R ++T R       +F+  +P C C +   L      +   GK  Y + C+     + CG
Sbjct:  204 WNSDVCVVNYYESSSNNLDWHSDRMSHIGPHNFIVSISLGATREFRLRKNY------TDGTDPSPIYSII-IPHNSMVIMQAGCQEEYRHSVNSMRTALQVNPISGAARFNLTFRFYPL---QFIKQLPRCECNLTMTLRRSFKSIETRGK--YFWSCENKYQNKDCG 359
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig644.15116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU35_ECTSI1.900e-13652.03Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A6H5KU93_9PHAE5.450e-9849.862OG-FeII_Oxy_2 domain-containing protein n=1 Tax=E... [more]
A0A7S1A3Y5_NOCSC3.700e-2337.37Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A0A8J5BE08_9ASCO5.200e-2134.24Alpha-ketoglutarate-dependent dioxygenase alkB-lik... [more]
A0A642VB26_9ASCO2.120e-2030.05Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A371C7W8_YARLL2.840e-2034.24Fe2OG dioxygenase domain-containing protein n=3 Ta... [more]
R1BFI0_EMIHU4.150e-1936.52Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A6G1I2L4_9PEZI6.690e-1932.23GRF zinc finger domain-containing protein n=1 Tax=... [more]
A0A7S3PFH9_9STRA5.070e-1834.73Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
Q6BNI2_DEBHA1.270e-1731.55DEHA2E21494p n=1 Tax=Debaryomyces hansenii (strain... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig644contigL-elsbetiae_contig644:29250..33281 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score415.2
Seed ortholog evalue3.8e-113
Seed eggNOG ortholog2880.D8LU35
Hectar predicted targeting categoryother localisation
EggNOG free text desc.2OG-Fe(II) oxygenase superfamily
EggNOG OGs2C0F4@1,2QUQ4@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Ec32 orthologEc-16_000070.1
Exons8
Model size1362
Cds size1362
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig644.15116.1prot_L-elsbetiae_contig644.15116.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig644 29250..33281 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816711.1495326-CDS-L-elsbetiae_contig644:29249..294581622816711.1495326-CDS-L-elsbetiae_contig644:29249..29458Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 29250..29458 -
1691683757.6645617-CDS-L-elsbetiae_contig644:29249..294581691683757.6645617-CDS-L-elsbetiae_contig644:29249..29458Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 29250..29458 -
1622816711.1615207-CDS-L-elsbetiae_contig644:30008..301201622816711.1615207-CDS-L-elsbetiae_contig644:30008..30120Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 30009..30120 -
1691683757.6774225-CDS-L-elsbetiae_contig644:30008..301201691683757.6774225-CDS-L-elsbetiae_contig644:30008..30120Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 30009..30120 -
1622816711.176524-CDS-L-elsbetiae_contig644:30458..306181622816711.176524-CDS-L-elsbetiae_contig644:30458..30618Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 30459..30618 -
1691683757.6895647-CDS-L-elsbetiae_contig644:30458..306181691683757.6895647-CDS-L-elsbetiae_contig644:30458..30618Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 30459..30618 -
1622816711.187382-CDS-L-elsbetiae_contig644:30820..309141622816711.187382-CDS-L-elsbetiae_contig644:30820..30914Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 30821..30914 -
1691683757.7093563-CDS-L-elsbetiae_contig644:30820..309141691683757.7093563-CDS-L-elsbetiae_contig644:30820..30914Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 30821..30914 -
1622816711.1978314-CDS-L-elsbetiae_contig644:31277..313541622816711.1978314-CDS-L-elsbetiae_contig644:31277..31354Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 31278..31354 -
1691683757.7190611-CDS-L-elsbetiae_contig644:31277..313541691683757.7190611-CDS-L-elsbetiae_contig644:31277..31354Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 31278..31354 -
1622816711.2102735-CDS-L-elsbetiae_contig644:31561..318721622816711.2102735-CDS-L-elsbetiae_contig644:31561..31872Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 31562..31872 -
1691683757.7300568-CDS-L-elsbetiae_contig644:31561..318721691683757.7300568-CDS-L-elsbetiae_contig644:31561..31872Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 31562..31872 -
1622816711.2220929-CDS-L-elsbetiae_contig644:32379..324641622816711.2220929-CDS-L-elsbetiae_contig644:32379..32464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 32380..32464 -
1691683757.7457776-CDS-L-elsbetiae_contig644:32379..324641691683757.7457776-CDS-L-elsbetiae_contig644:32379..32464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 32380..32464 -
1622816711.23429-CDS-L-elsbetiae_contig644:32967..332811622816711.23429-CDS-L-elsbetiae_contig644:32967..33281Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 32968..33281 -
1691683757.7568693-CDS-L-elsbetiae_contig644:32967..332811691683757.7568693-CDS-L-elsbetiae_contig644:32967..33281Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig644 32968..33281 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig644.15116.1

>prot_L-elsbetiae_contig644.15116.1 ID=prot_L-elsbetiae_contig644.15116.1|Name=mRNA_L-elsbetiae_contig644.15116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=454bp
VCSRPFPQHAIESHAWGCMPPTDDLEVAAAPKRSPIGAGRGKRAIPANKE
QSPARITDTRRASPSLPSRGSEIDLVSTASAASSTPEVPSSNMTVSRSGD
VMQARLMAAGKRASKAERELKIVPPAWPIERIEDIFPAKKADSLLASMLH
ASRDWTSRPWFNAASGIPGMTHSRSCMYRISTAQDTTNNSTTTTTTNTAG
TDRNQTGSAQTPGQARQRGGSRPTADPDGVTESDSGDDEGPKLAPRELLE
VVPLVVEVVRRCRQRRRAKEGLGGHEGSDWNPNFCICHIYDNHRNYLGAH
SDTLSIIGPDAIVVGLSLGAKRVFMVQKKLPWGSKAAAGSGSEGTKKLLD
MPHNSAIVMWAGCQERYKHAVPNMTKGVGTHPIAGTNRISITLRERKEAL
PRFLLPVPNCCCGVPAELISRVLPNGKVHYLFRCDRAQGREQCGFTLSKG
PRR*
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mRNA from alignment at L-elsbetiae_contig644:29250..33281-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig644.15116.1 ID=mRNA_L-elsbetiae_contig644.15116.1|Name=mRNA_L-elsbetiae_contig644.15116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4032bp|location=Sequence derived from alignment at L-elsbetiae_contig644:29250..33281- (Laminarionema elsbetiae ELsaHSoW15)
GTGTGCTCGAGGCCTTTCCCGCAGCATGCAATCGAGAGTCACGCTTGGGG
GTGTATGCCACCGACGGATGATCTCGAGGTAGCAGCAGCACCCAAAAGAT
CGCCAATCGGAGCGGGAAGGGGAAAGAGGGCGATACCCGCGAACAAAGAG
CAGTCGCCGGCTCGCATAACCGACACGAGGAGGGCTTCCCCGTCTCTGCC
CTCTCGCGGCAGCGAAATCGACTTGGTTTCCACTGCTTCCGCTGCTAGTT
CTACTCCTGAGGTGCCCTCATCGAACATGACAGTCTCGCGGAGCGGGGAC
GTGATGCAGGCAAGGTTCTCCCGAGTTTCGCACTGACCATCTGTGCTGCA
TGCAATATATAAGGTGTTGTGCGCAGCGGGGTGGGTGCATCATATGCGTC
CAGCGTAACGTGGTGCGTGACAAATGTATAAGTGGTTCCCGAACTTTAGT
CTAGATATACAATCTAACAAGAGTTACAGGTACGGAACTGTGGTCATTAT
GAGCAGCCCGGCTGCTTGAGCTTCCTGCCCCCTTCCGCTTAAACAGCTTG
AACAGTTGCTGCGACAAATGATAGTTGTCAGCTCATTCCTGCAAACTTCA
GCGTTTTTTTCAACGGTCCGCCGGCCAACGATAAAAAAGCAAAAAACCGC
CCTGCAAGGTTGAGATGGCACGCACGCACAACTTCCCACTCGGTAATGCC
AGGCCGTGTTCGACAACCTGTGTCACGGACCCCCTAGGGTACGTATTAAT
TACTTCGCCACTCTTTGTTATTGGCCGTGTTGCCGACCTCATATATGGTG
TTGTGCCGTGACCAGAGGCTAATGGCGGCAGGGAAACGAGCAAGCAAGGC
CGAGAGGGAGTTGAAGATTGTTCCGCCCGCCTGGCCAATCGAGCGCATCG
AGGTGAGAGGCCGGCGTAATTGGCATCCACGTCCAGCATGTGCGTGTGCA
AGATGGGTTTCCCCAAATAGCGGAGCCGTGCGTTCGAGGAAATGTGGCTA
CTGCATGGCTGACCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGG
AGGGAGAAAGAGAGAGAGAAAGAGGGAGACGGTAGAGACTAAAGAGAAGA
GCCCTACATAAGAAAGTACGTATGTAGTAGGCCACGAACACTGTAGGTGA
TCCGTGTTTCTGCGTGACCCCTACAACAGTACCTCTTGGAGGAGTTGGGG
GCGCGCGTAACGGCTTCTTTCTGCATACTGTAGCTCGCGGGGAAAAAGTG
AACGCAACTTCCCTACGTATTGTAATACTGCTGTACGTGATTTCAGGAAG
GTGTAGTAAGCCGGTGGTAAACCCACCCTGTTCGTCCGGGCCTTTTTTCG
CGCGCCTCGCCCTTTTTCTGTTTGTCGTCTTATACATACATATATATGTA
CGATGACAGGATATCTTCCCGGCCAAGAAAGCCGACAGCCTGCTCGCGAG
CATGCTGCACGCGTCGCGCGACTGGACCTCGCGCCCTTGGTTCAACGCCG
CCAGCGGAATCCCTGGCATGACGCACTCTCGCTCGTGCATGTACCGCATC
TCGACCGCCCAAGACACCACCAACAACAGCACCACCACCACCACCACCAA
CACTGCCGGCACAGATAGAAACCAAACCGGTTCAGCGCAAACGCCGGGCC
AAGCGCGACAGCGCGGGGGCTCACGTCCGACCGCCGACCCGGATGGAGTG
ACTGAGAGCGACAGCGGTGAGTGTGCCGGGGCGATGAGGGGGAAGGCCGA
GAGCGGTGCCGGCGACGTGCTCCAATCCTCCGTAGACGAAAGCTTCCATG
CCGGGGAGGGTGGTGGTGCCGACCCTTCGGGAAGCGCGGCAGCACTGGAG
CGGTCAGAGGGTGTGGTGCCGGGGTCGGCCCCGGACTCTGAGACGGAAGG
CTCGGAACAGAGAAAGAGTTGGCTCAGCGATGAGGGTCCCAAGCTGGCTC
CGCGAGAGCTGCTTGAGGTCGTTCCTCTGGTCGTGGAGGTTGTTCGAAGG
TGCAGTCGGCCATCTGTGCGCTGTGGGTCTGCGGGGAATATATAGCCGAC
GGTCTTCTGATGCCATTTTCGTTGCTGCCATCGTGTTCTTCCGCTCGTTC
GCGTTGAACCGAGTCGGTCGGATCTTCAGAGAACGATCGATGCCTTGCAC
ATAAACATGTACAAGTCTCTCGCGCGGAATGCTGCGGTGTGGACATTCTG
GCGCGAGGCCCAGCCACAGATTTGTGAAAACGCTGCTTGCTAGATACTGC
TGCTCCAGCTGTTAGACTCAAGGCGCGCCCGCCGCCCCTCAACTTACGAC
GCTCCCCCTGTCTCTTCCAAATTCGATCGCGCCCGCCTGCCTGGTTTTCC
ATATTTCATGTCCAGAGGACAGCGCCGACGCGCGAAAGAAGGGCTGGGGG
GACACGAGGGATCGGACTGGAACCCGAACTTTTGCATCTGCCACATTTAC
GATAACCACAGGTGAGGTATATGCTTCAACACCCCTTCTTAGACTTGAGT
TTCATTTATCCTACATGAGAAAGGCAGCAAATACAATACCTTGAAGCGAA
GCACGCCTGGCAAAAACAAATTACAGGCACAACATGGGATACCTCCTCAC
CCATCGGCAACCGCCAAGCAAAGGAGTACGTGTACTCTACCACATTTGTT
TTTCCCCACGCAGGAATTACCTCGGCGCGCACAGTGACACGCTGTCGATA
ATTGGCCCGGACGCGATCGTTGTCGGCCTGTCTCTGGGAGCGAAGCGGGT
TTTCATGGTGCAGAAAAAGTTGCCGTGGGGCTCCAAGGCCGCCGCTGGCA
GTGGCTCAGAGGGAACGAAGAAGGTGATTTTTTTTGCTCTTCAAGGGAGT
TGTTGCTGTGGCGTTTGCCAGGCATCCCCTTTTATTGCTTCGTCGCAGCT
AAATACTGTGCTCCCATATTTATTTCGCTCGATGTTGTCGTTGATGTGTT
TGAGCACGTTCATTTTTTACCGTTTATCCATAATGTATGCGAGATCGATC
TGCAGATTACCTTCTCCCAATTCTGCGTCTGAGGTGTTCGTTCTCGCAGG
TGCTCCGCACGCGTGTATCGGACGCAGCCCGCAGTTGATTGAATGCACAA
CTAACTGGACGCTTGCTGTTTGCTTCCCATCGCGTGTCTGCTGCTGCGGT
CCTGGGGGCAGTTGCTGGACATGCCTCACAACTCCGCTATCGTTATGTGG
GCGGGTTGCCAAGAGCGGTACAAGCATGCGGTACCGAACATGACCAAGGG
GGTGGGGACCCACCCGATCGCCGGTGAAATATTCCGCTGCTATTATTCTA
GGGCAGTGACAGTGCCACCCGATCCTAGAGGGTGTGGGTCTGGGTCTTGA
TGCAGAGCAAGCGCCCCGGTGTGAAAATAAGCATGTAGCACACCGCAAGA
CAAAGTGTATGTCGGCGATAGATCGACATATTTTCGTTGCTTTTTGGCCG
AGAGGTTCTGTTTATTTCGTGTGTTGCTTTCGACGCATTTTTTCTGTCGC
CGTAGTCAAGCTGAAGGGTCCTCAAAGGACAACGCACCGGCAGTTCTGTT
GCTCTAATTTTTTGGTGGGGTGGGGTGGCATTGTAAGGGCCATGTCACGT
TGCAACACCCCGGGCAAGCTTGGGGATGCCGTCTGAATGTGGCATCTTTG
TATTTAATCTGGTAACAAAGGATCACAGCATATATATCGTAGATAAGTAT
GTTGTGCGCTTTGCTCTCTTAACTTGCGCTGCGCACACACAACAGCTCGC
CCATCCACACGCACATGCATGAACAAACGCCCATTTGTCTCTGCCGCCCC
TCTTGCGCGCAAACAAAACACAGGCACAAATCGGATCAGCATCACGCTGC
GAGAGCGCAAGGAGGCCCTCCCGCGGTTCCTCCTCCCTGTCCCGAACTGC
TGCTGCGGGGTGCCGGCCGAGCTCATCTCGCGAGTGCTCCCAAACGGCAA
GGTGCACTATCTATTTCGCTGCGACCGGGCGCAGGGGCGGGAGCAGTGCG
GCTTCACCCTGTCCAAGGGCCCGCGCAGATAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig644:29250..33281-

>mRNA_L-elsbetiae_contig644.15116.1 ID=mRNA_L-elsbetiae_contig644.15116.1|Name=mRNA_L-elsbetiae_contig644.15116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2724bp|location=Sequence derived from alignment at L-elsbetiae_contig644:29250..33281- (Laminarionema elsbetiae ELsaHSoW15)
GTGTGCTCGAGGCCTTTCCCGCAGCATGCAATCGAGAGTCACGCTTGGGG
GTGTATGCCACCGACGGATGATCTCGAGGTAGCAGCAGCACCCAAAAGAT
CGCCAATCGGAGCGGGAAGGGGAAAGAGGGCGATACCCGCGAACAAAGAG
CAGTCGCCGGCTCGCATAACCGACACGAGGAGGGCTTCCCCGTCTCTGCC
CTCTCGCGGCAGCGAAATCGACTTGGTTTCCACTGCTTCCGCTGCTAGTT
CTACTCCTGAGGTGCCCTCATCGAACATGACAGTCTCGCGGAGCGGGGAC
GTGATGCAGGCAAGGTGTGCTCGAGGCCTTTCCCGCAGCATGCAATCGAG
AGTCACGCTTGGGGGTGTATGCCACCGACGGATGATCTCGAGGTAGCAGC
AGCACCCAAAAGATCGCCAATCGGAGCGGGAAGGGGAAAGAGGGCGATAC
CCGCGAACAAAGAGCAGTCGCCGGCTCGCATAACCGACACGAGGAGGGCT
TCCCCGTCTCTGCCCTCTCGCGGCAGCGAAATCGACTTGGTTTCCACTGC
TTCCGCTGCTAGTTCTACTCCTGAGGTGCCCTCATCGAACATGACAGTCT
CGCGGAGCGGGGACGTGATGCAGGCAAGGCTAATGGCGGCAGGGAAACGA
GCAAGCAAGGCCGAGAGGGAGTTGAAGATTGTTCCGCCCGCCTGGCCAAT
CGAGCGCATCGAGGCTAATGGCGGCAGGGAAACGAGCAAGCAAGGCCGAG
AGGGAGTTGAAGATTGTTCCGCCCGCCTGGCCAATCGAGCGCATCGAGGA
TATCTTCCCGGCCAAGAAAGCCGACAGCCTGCTCGCGAGCATGCTGCACG
CGTCGCGCGACTGGACCTCGCGCCCTTGGTTCAACGCCGCCAGCGGAATC
CCTGGCATGACGCACTCTCGCTCGTGCATGTACCGCATCTCGACCGCCCA
AGACACCACCAACAACAGCACCACCACCACCACCACCAACACTGCCGGCA
CAGATAGAAACCAAACCGGTTCAGCGCAAACGCCGGGCCAAGCGCGACAG
CGCGGGGGCTCACGTCCGACCGCCGACCCGGATGGAGTGACTGAGAGCGA
CAGCGGTGAGATATCTTCCCGGCCAAGAAAGCCGACAGCCTGCTCGCGAG
CATGCTGCACGCGTCGCGCGACTGGACCTCGCGCCCTTGGTTCAACGCCG
CCAGCGGAATCCCTGGCATGACGCACTCTCGCTCGTGCATGTACCGCATC
TCGACCGCCCAAGACACCACCAACAACAGCACCACCACCACCACCACCAA
CACTGCCGGCACAGATAGAAACCAAACCGGTTCAGCGCAAACGCCGGGCC
AAGCGCGACAGCGCGGGGGCTCACGTCCGACCGCCGACCCGGATGGAGTG
ACTGAGAGCGACAGCGGTGACGATGAGGGTCCCAAGCTGGCTCCGCGAGA
GCTGCTTGAGGTCGTTCCTCTGGTCGTGGAGGTTGTTCGAAGGTGCACGA
TGAGGGTCCCAAGCTGGCTCCGCGAGAGCTGCTTGAGGTCGTTCCTCTGG
TCGTGGAGGTTGTTCGAAGGTGCAGACAGCGCCGACGCGCGAAAGAAGGG
CTGGGGGGACACGAGGGATCGGACTGGAACCCGAACTTTTGCATCTGCCA
CATTTACGATAACCACAGGACAGCGCCGACGCGCGAAAGAAGGGCTGGGG
GGACACGAGGGATCGGACTGGAACCCGAACTTTTGCATCTGCCACATTTA
CGATAACCACAGGAATTACCTCGGCGCGCACAGTGACACGCTGTCGATAA
TTGGCCCGGACGCGATCGTTGTCGGCCTGTCTCTGGGAGCGAAGCGGGTT
TTCATGGTGCAGAAAAAGTTGCCGTGGGGCTCCAAGGCCGCCGCTGGCAG
TGGCTCAGAGGGAACGAAGAAGGAATTACCTCGGCGCGCACAGTGACACG
CTGTCGATAATTGGCCCGGACGCGATCGTTGTCGGCCTGTCTCTGGGAGC
GAAGCGGGTTTTCATGGTGCAGAAAAAGTTGCCGTGGGGCTCCAAGGCCG
CCGCTGGCAGTGGCTCAGAGGGAACGAAGAAGTTGCTGGACATGCCTCAC
AACTCCGCTATCGTTATGTGGGCGGGTTGCCAAGAGCGGTACAAGCATGC
GGTACCGAACATGACCAAGGGGGTGGGGACCCACCCGATCGCCGTTGCTG
GACATGCCTCACAACTCCGCTATCGTTATGTGGGCGGGTTGCCAAGAGCG
GTACAAGCATGCGGTACCGAACATGACCAAGGGGGTGGGGACCCACCCGA
TCGCCGGCACAAATCGGATCAGCATCACGCTGCGAGAGCGCAAGGAGGCC
CTCCCGCGGTTCCTCCTCCCTGTCCCGAACTGCTGCTGCGGGGTGCCGGC
CGAGCTCATCTCGCGAGTGCTCCCAAACGGCAAGGTGCACTATCTATTTC
GCTGCGACCGGGCGCAGGGGCGGGAGCAGTGCGGCTTCACCCTGTCCAAG
GGCCCGCGCAGATAGGCACAAATCGGATCAGCATCACGCTGCGAGAGCGC
AAGGAGGCCCTCCCGCGGTTCCTCCTCCCTGTCCCGAACTGCTGCTGCGG
GGTGCCGGCCGAGCTCATCTCGCGAGTGCTCCCAAACGGCAAGGTGCACT
ATCTATTTCGCTGCGACCGGGCGCAGGGGCGGGAGCAGTGCGGCTTCACC
CTGTCCAAGGGCCCGCGCAGATAG
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