mRNA_L-elsbetiae_contig6434.15106.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6434.15106.1
Unique NamemRNA_L-elsbetiae_contig6434.15106.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6434.15106.1 vs. uniprot
Match: D8LEG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEG6_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 1.370e-106
Identity = 168/194 (86.60%), Postives = 183/194 (94.33%), Query Frame = 2 
Query:    2 VREQISKEWIQDLGLIAAENSELERHREDSLCLDSDSKQKNRKLVFDHDPLNNTSSPYRGKNYKLLLDMITNAAVKAYRSELRISGDRYTLNWLEKFMHRNDMEDGPGLKGNGLVEAILDGPIVVIKDPRTEKNRVIDPGHIGRQLMSFRQSEAELVTVAMESVSADHVALNRQFLEERMRDQLEEVVLTQRRK 583
            VREQIS+EWIQDL LI+AENSE+ERHREDSLCLDS+SK+++RKLVFDHDPLNNTSSPYRGKNYKLLLDMIT AAV+AYRSELR+SGDRYTLNWLEKFMHRNDMEDGP LKGN LVEAI+DGPIVVIKDPRTEKNRVIDPGHIG QLM+FRQ EA+LVT AMES+ +DHV L RQFLEERMRDQL+ VVLTQRRK
Sbjct:  195 VREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELRVSGDRYTLNWLEKFMHRNDMEDGPNLKGNDLVEAIIDGPIVVIKDPRTEKNRVIDPGHIGGQLMNFRQLEAQLVTEAMESIPSDHVELKRQFLEERMRDQLDNVVLTQRRK 388
[Close]
BLAST of mRNA_L-elsbetiae_contig6434.15106.1 vs. uniprot
Match: A0A835YQU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU4_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.190e-30
Identity = 83/223 (37.22%), Postives = 119/223 (53.36%), Query Frame = 2 
Query:    2 VREQISKEWIQDLGLIAAENSELERHREDSLCLDSDSKQKNRKLVFDHDPLN----------------NTSSPYRGKNYKL--------------------------LLDMITNAAVKAYRSELRISGDRYTLNWLEKFMHRNDMEDGPGLKGNGLVEAILDGPIVVIKDP---RTEKNRVIDPGHIGRQLMSFRQSEAELVTVAMESVSADHVALNRQFLEE 535
            VREQ+++EWI+DL L+  EN+EL RH  D+L +D+     +R+LVFDHDP                   T  PYRGKNY+                           LL M+T  AV+ Y +ELR SG RY  NWLE+FM    ++ G GLKGN L+E++L+GP+++I       ++K RVI+P  I + +M  R + AE +   + +V  DH+ L    LE+
Sbjct:  167 VREQLAQEWIKDLELVETENAELLRHHVDTLSMDAKQADSSRQLVFDHDPCAVEGEVLXXXXXXXXXYGTKLPYRGKNYRADSSRXXXXXXXXXXXXXXXXXXXXXELLAMVTRVAVRRYEAELRQSGHRYHQNWLERFM----LKGGKGLKGNALLESMLNGPMMMINPKVRGNSDKPRVIEPAQIAKGVMLRRATAAEEIRTILGTVPGDHLRLKASMLEQ 385
[Close]
BLAST of mRNA_L-elsbetiae_contig6434.15106.1 vs. uniprot
Match: A0A836CAL6_9STRA (Alpha-type protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL6_9STRA)

HSP 1 Score: 126 bits (317), Expect = 7.200e-27
Identity = 72/194 (37.11%), Postives = 123/194 (63.40%), Query Frame = 2 
Query:    2 VREQISKEWIQDLGLIAAENSELERHREDSLCLDSDSKQKNRKLVFDHDPLN-NTSSPYRGKNYKLLLDMITNAAVKAYRSELRISGDRYTLNWLEKFMHRNDMEDGPGLKGNGLVEAILDGPIVVIKDPRT----EKNRVIDPGHIGRQLMSFRQSEAELVTVAMESVSADHVALNRQFLEERMRDQLEEVVL 568
            VREQ+++EW++DL L+  EN EL RH +D L +++D   + R+L F +DP   N  SP   +NY+ L++++T  A++ Y +ELR++G RY  NWLE+F+    ++ G  L GN L+EA+L+GP+++I +P+     +K ++I+P  I + +M  R + A      + S+  DH  L R FLE+++  Q + +V+
Sbjct:  513 VREQLAQEWMRDLQLMDQENHELLRHHDDLLVMNADEADRARQLFFYNDPWGTNAKSPLHQQNYRELIELVTKVALRRYETELRMTGQRYHANWLERFL----VKAGDNLVGNDLMEAMLEGPMMMI-NPKVSGSADKPKMINPLQIAQGVMKRRVAAAAEFRSMLTSIPDDHAQLMRTFLEQQLGAQADSLVM 701
[Close]
BLAST of mRNA_L-elsbetiae_contig6434.15106.1 vs. uniprot
Match: A0A7S2V6P4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6P4_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 7.780e-17
Identity = 60/200 (30.00%), Postives = 103/200 (51.50%), Query Frame = 2 
Query:    2 VREQISKEWIQDLGLIAAENSELERHREDSLCLDSDSKQKNRKLVFDHDPLN------NTSSPYRGKNYKLLLDMITNAAVKAYRSELRISGDRYTLNWLEKFMHRNDMEDGPGLKGNGLVEAILDGPIVVIKDPRTEKNRVIDPGHIGRQLMSFRQSEAELVTVAMESVSADHVALNRQFLEERMRDQLEEVVLTQRRK 583
            VRE I++E  +DL L+ A+N E+ RHR + L L S+   +    V D    N      +  +PYR + Y  L +M+TN A++ ++SE RI      ++WL+  +  N+      LKG  L+  I +G +       T+K + IDP  I  Q++S R+  AE +T  ++ V  D+  L+   L+  +  ++++    + RK
Sbjct:   51 VREHIAQEMSEDLKLVRAQNEEVVRHRVNKLVLGSEEADRASYRVHDFADFNIDLDFGHQHTPYRYQTYTKLTEMVTNIAIRRFKSEARILNKAKVISWLDNILAENEH-----LKGQELLMTIFEGTVTARARESTKKAK-IDPHSITTQILSHREEAAEELTEYLKGVKGDNARLSMSILQSSLELEMDDAEAEEHRK 244
[Close]
BLAST of mRNA_L-elsbetiae_contig6434.15106.1 vs. uniprot
Match: A0A835Z7Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q1_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.220e-11
Identity = 60/207 (28.99%), Postives = 100/207 (48.31%), Query Frame = 2 
Query:    2 VREQISKEWIQDLGLIAAENSE-----------LERHREDSLCLDSDSKQKNR----KLVFDHDPLNNTSSPYRGKNYKLLLDMITNAAVKAYRSELRISGDRYTLNWLEKFMHRNDMEDGPGLKGNGLVEAILDGPIVVIKDPRTE-KNRVIDPGHIGRQ----------LMSFRQSEAELVTVAMESVSADHVALNRQFLEERMR 544
            +R Q++ E   DL LI +EN             +++  +D L        + R    + V D D +N+T +PYR   Y  +L ++T  +++ Y+ ELRI GD++TL WL+K    N       L GN L+EA+L+GP+V+I D +   + +V+ P  +             +M+ R S        +  V  +H AL +  LE ++R
Sbjct:  116 IRAQLAAELFHDLELIESENERXXXXXXXXXXXVQQFYQDELRYGIKEATRLRLRTWQPVVDTDAINSTDTPYRSSLYLAVLALVTKVSLERYKKELRIVGDKHTLAWLDKIGDANLT-----LSGNDLIEAMLNGPMVLINDGKDRARPKVVQPLRVAADXXXXXXXXXXVMALRVSVVREFKGLLAGVPQEHQALIQGVLERQLR 317
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6434.15106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LEG6_ECTSI1.370e-10686.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQU4_9STRA2.190e-3037.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CAL6_9STRA7.200e-2737.11Alpha-type protein kinase domain-containing protei... [more]
A0A7S2V6P4_9STRA7.780e-1730.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z7Q1_9STRA2.220e-1128.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6434contigL-elsbetiae_contig6434:5775..10360 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score218.4
Seed ortholog evalue1.9e-54
Seed eggNOG ortholog2880.D8LEG6
Hectar predicted targeting categoryother localisation
EggNOG OGs2E04B@1,2S7JZ@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved secreted protein
Ec32 orthologEc-21_004770.1
Exons4
Model size1778
Cds size381
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6434.15106.1prot_L-elsbetiae_contig6434.15106.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6434 6967..9260 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816710.1810768-UTR-L-elsbetiae_contig6434:5774..69661622816710.1810768-UTR-L-elsbetiae_contig6434:5774..6966Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6434 5775..6966 -
1691683756.962605-UTR-L-elsbetiae_contig6434:5774..69661691683756.962605-UTR-L-elsbetiae_contig6434:5774..6966Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6434 5775..6966 -
1622816710.2280304-UTR-L-elsbetiae_contig6434:9260..93191622816710.2280304-UTR-L-elsbetiae_contig6434:9260..9319Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6434 9261..9319 -
1691683757.0081515-UTR-L-elsbetiae_contig6434:9260..93191691683757.0081515-UTR-L-elsbetiae_contig6434:9260..9319Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6434 9261..9319 -
1622816710.241344-UTR-L-elsbetiae_contig6434:10214..103601622816710.241344-UTR-L-elsbetiae_contig6434:10214..10360Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6434 10215..10360 -
1691683757.0200844-UTR-L-elsbetiae_contig6434:10214..103601691683757.0200844-UTR-L-elsbetiae_contig6434:10214..10360Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6434 10215..10360 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816710.1928873-CDS-L-elsbetiae_contig6434:6966..70741622816710.1928873-CDS-L-elsbetiae_contig6434:6966..7074Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6434 6967..7074 -
1691683756.9758356-CDS-L-elsbetiae_contig6434:6966..70741691683756.9758356-CDS-L-elsbetiae_contig6434:6966..7074Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6434 6967..7074 -
1622816710.2054243-CDS-L-elsbetiae_contig6434:8136..82831622816710.2054243-CDS-L-elsbetiae_contig6434:8136..8283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6434 8137..8283 -
1691683756.986359-CDS-L-elsbetiae_contig6434:8136..82831691683756.986359-CDS-L-elsbetiae_contig6434:8136..8283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6434 8137..8283 -
1622816710.2160945-CDS-L-elsbetiae_contig6434:9134..92601622816710.2160945-CDS-L-elsbetiae_contig6434:9134..9260Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6434 9135..9260 -
1691683756.9970577-CDS-L-elsbetiae_contig6434:9134..92601691683756.9970577-CDS-L-elsbetiae_contig6434:9134..9260Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6434 9135..9260 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6434.15106.1

>prot_L-elsbetiae_contig6434.15106.1 ID=prot_L-elsbetiae_contig6434.15106.1|Name=mRNA_L-elsbetiae_contig6434.15106.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
MITNAAVKAYRSELRISGDRYTLNWLEKFMHRNDMEDGPGLKGNGLVEAI
LDGPIVVIKDPRTEKNRVIDPGHIGRQLMSFRQSEAELVTVAMESVSADH
VALNRQFLEERMRDQLEEVVLTQRRK*
back to top

mRNA from alignment at L-elsbetiae_contig6434:5775..10360-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6434.15106.1 ID=mRNA_L-elsbetiae_contig6434.15106.1|Name=mRNA_L-elsbetiae_contig6434.15106.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4586bp|location=Sequence derived from alignment at L-elsbetiae_contig6434:5775..10360- (Laminarionema elsbetiae ELsaHSoW15)
GGTCCGGGAGCAGATCTCCAAGGAGTGGATCCAAGACCTCGGGCTCATCG
CGGCCGAGAACTCCGAGCTGGAGAGGCATCGGGAGGACTCCTTGTGCCTG
GACTCGGACTCGAAGCAGAAGAACAGGAAGCTGGTATTCGACCACGGTGA
GAGCGAGAGAGACAGAAAAGAGAGTGCAGAGAACGAATGGCGTGCCCGGC
CCGACCCGAAGGGAAGGGGGGGGGGGGGGGGGGGGGGTTCTCTCACCACG
GGCAGCAGCGCTACAAAACGCCCCCCTTTGTCCTCCTTGTTTCTATCCCC
CCCCCCTCCGTCNNNNNNNNNNGCGTTACGCGCCCGGGGGGGAGGGGAGA
GAAAAAAAAAGGGGGGGCCAGAAAACGAGGGGCGGCCCGGGCCCGCCCCG
AGGGGAGGGGGGGGGGGGGGGGGCGTGGGGTTCTGTCGACACTGGCAGCA
TGCCTATCAACAGTCCGCTCTTGCACTTCATGTTTGTAGCCCCCCTCCCT
GCGTCCTCTTCGCTTTCGAAAACGGCTCTCTTAAAAGCGTTTGACAAAGA
ACAAAGCAACACTACTGCTGTCCCTCCCTTCTCGACGCCACCGAGACTTG
CTGTTTACCGGCGGCATATATGGTAGGAGTATTTTATGTCTACGCTCACG
GCAGTATTGTAGTATGCTCACACCGTGCGTACATTTCAACTAATGTGCAA
CACCAACACCCCGACAGCTGATATGTTATCTGCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCGCTCGCCTTTTGTTTTT
TTTTTTTTTTTTTTTCTTCTTCCCTCCGCCCGCNNNNNNNNNNTTTGGTG
TATTCTCCCCCCGTCCCGACTTTTTCAATAACGTTCAACCCCAACACCCC
CCCAGGTGATTTTTTTTTTGCCCCCCCCCCCCCCCCCTCCCCCGCCCAAA
TGTTCGTCCGTTGGTGCACTTTGGCTTGTTATTTGTTTTTTTTCTTTTCC
GTGCACGACGCGCGCGCGCGCGCACACACACACACACGCAGACCCGCTCA
ACAACACGAGCTCGCCGTACCGCGGGAAGAACTACAAGCTGCTCCTCGAC
ATGATCACGAACGCCGCCGTCAAGGCGTACCGCTCCGAGCTGCGCATCTC
CGGGGACCGCTACACCCTTAACTGGCTCGAGAAGTTCATGCACAGGAACG
ACATGGAGGACGGGCCCGGCCTCAAGGTGCGCATGACGCGCAGCATTCGT
TGTTGCTGTTGTCGGCGGCGGTGGTGGTGGGTAGGGAAGGGGCCTAGTTG
CTATTGTTCGGCTGCAGCAGTAAGTGGCGTTTCTACGCCTTCGGTATATA
TGTACGTCGTCCAGCAGTCATTATATGCGTACGCCATCGCGAGGATTGGT
GTACTTGTCATGTACAAGGCCGAGGTCTAAGGCAGAGCTTGGTCGCCGGT
TGTACCTATACCCTGTGCGTGCGCGCTTGCACGGGTTCGTGTCGCGTGCG
CTTCGTGCCGTCGTACATATACATAAATACATACAAACATATGCATCATG
ACGGGCATGTATTGGTGATGGTCGAATACGAGACATGTGTTTACCCGGTG
AGGACTGTCGTGCGTGATGACGTCATGACGAGCGAGGGGTCTCTAGATGC
AGCCAGCCTGTCGGAATTTAGTCGAGCGAAATACCAAGTGCATTGGTGCG
TCGTATGGCCGGCTGTTGTGTTGGCTCGGCGATCAAGTTCGACGCAGGAG
CTACGCGTAGAGGATGGAAAGGAGTCCCGTCCCATTTGTTTTAGAAGGGG
CCCCCCTTTTTTCAAGCCACCGCGATCGTGACTCTGTGGACGCCCCCACC
CCTCCTTACGCTTATGTTGTAAATACCATACGGGGTACCAGGTAGTCAAA
AGTCTAGATCATACTCTTTACCTATCATTTGGGGTGTGCTTCATTGTTTT
CGTGTTGGGAGTATTTATCTATTTTCTGGTTCGGGCGAGAGGGAATATCC
CCCTCTTGCCCTCCTCCTCCTGACTTATTTTTCCGAAACGTTGTCGATCG
ATCGGTGTGTCTTGTCTTGTCACCCAGGGCAACGGGCTGGTGGAGGCCAT
CCTCGACGGGCCCATCGTGGTGATCAAGGACCCCCGCACCGAGAAGAACC
GCGTCATCGACCCCGGCCACATCGGCAGGCAGCTCATGTCCTTCCGACAG
TCGGAGGCCGAGCTCGTGACGGTGGTGAGTGGGCCGAATCCAACGCGAGC
GCCTGCGTTGGTGCTCTCTGTAGGGGGCTAAAAAAAACAACTCATGTGGT
TATGTAGGTATCTATATATACAATTATTTTTTTCCCCTCCCATTATTGGC
TTATTCGTCGTCTGCCCCACTGGCCCCTTTCCTCCACTACGACTAGCCAG
ACGACCTATGCATGCGCCCGTCGTGCTTCTGAGGTCCCGGTTTGCATGTT
CATTTTGTGCTGTGTGTCGGCTCTGTTGCCAGCGGTAACTCTGCGCTATT
TGGTCAGTGTTTTTCATTTCATCTCACGATATGTTTTTTTTGCGAAAGCA
AGTTTACAATATACGGGTGTATCTGGTGCGAGCGCGCTCCTGTTTTGACA
TTGTTGCGTCTCTTTTTTTTCCGTTTTTCGATATTCGCTGTCACGTCGCC
CCCACATACGTAAGTTTCAAGATTTATGTACGTACATACGTATGTCCAAT
GCTTCAGATATCAGTCGCGGTTTTCCAGACAAACAGGTGCTGTGCTGTCC
TGCTCGATGTCGTAGGACGGCGAGTCAGAAAATCAAGGCAACGCGGCCGT
CAACCAACCCTTCCCCCAAAGCATTTGTACGGAAAAGCGAACCGGAAAGG
CGACGACAGCAACTTATTGTACAGCAGAGCGTATTCCTCCCGTTGCTGTG
CGCCCCATATTTTCCCCTTTTTTTGCTCCCTCCACAAGCGAGCTTCGTTT
TCTTTCATTTATCTCGTCCTCTCTCGCGCCCTCACCTCTCACTCCTCTCC
TTTCTGCTCCTCTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCTCTCTTGTCCTCTCTTGTCCTCTCCCC
TCCCCTCCCCTCTCCTCATCTTCCCTCTGCTCTCCTTCTGATTTTTTTGT
CGTTTTTGCTGGCTGTGGTTTCGCTGCTGCTGCTGCTGCCTGCCTCGCCG
GTCCGTCCGTCCGTCCGTCGGCGGGGGGTTCCGTAGGCCATGGAGTCCGT
CTCGGCGGACCACGTGGCGCTCAACCGGCAGTTCCTGGAGGAACGCATGC
GGGATCAGCTCGAGGAGGTGGTGCTGACACAACGCCGCAAGTGAGAGAGA
GAGAAAAGAGAAAAAAAACTGGGGTACCTACAGCAGCTAACACATAACAT
GGAGGAGAAAAAACAAACTGGGGTATGTGCCTACAGCAGCTCCCTTTATA
GTAAAAAATATAACAATGGAGGAGACAAGAGAGAGGCGAAAGTGCACATG
GCATGAGCAGCGATGCAAAATGATGCGAAAGGTTTTGCCCGAGTTTTCCC
TTCTGTGTGGTGACCCCACCCCGGATGTGTTTTTGGTGTCAACGACACAA
CGAAAAGGTCCATTTCGCCCCTCCCAGCTCTACTGCTGTGCGGTCGGCCG
ACCATTCGTCGGACTGAGTGCCCCGTGCTTGCTGCCTTTGGTCTGGCGAG
AACCCGATGAGTTAGTAGGCGTGCCCCGCCTCCGTTGTGTAGGGTTTGAT
ATTGAGGTCATTTTTTATCTCGAGGTCATTCTTAGCCTAAATAGTATCGA
CGGCGGGCGGTGCGCACGATCAATACGAGTGTCCCCGTGAGGTTCTAAAA
TAGAGCACCAAAATGCGATTGATTGCTCAGTGGTAAGTAACCATACGGAA
TCGACCGGCAGACGATAATCGACGGCGATGATCTCTGGCCTTGCACAAAG
AAAGTCAGGCGGGGCCTGATCTCTGGTTTCCTATCAGCGGGGGACCGCTG
GTGCTCTTGTGTCGCCATCACCAAAGAGAGTCAGTTGTTCAGCACCCGCT
GAACGTGGTTGGGATATGGACACCTTGAGCCTGCTGAGCCCCTCGAGAGA
GAGTTTGACCAGGTGTGTGCTCGTTGGACAAGCTTTGTATTTGGCCCCCT
CCCACGGTGATCTGATGAGTTGTCGCCCCCCCCCTGCCATTTCTGCTATT
TGGCCACCTCTGCGTGTTCCCGCAGGCGCATTGTGGAGGCTTCAGCGCCG
AAAGAAACCCCGTCGGCGGACACCGGCATGGAAGGGTTAGAGATTTAAGC
GAAAGAGGCATGCGTCCGTCCGGTTTGGTGACTTGATTGAGGGACAGGGG
ATTGGGCCCAGGGGGGATAAGAGAACGAGAAGGAGGGAAGAGGACGAGGA
GGAGGAGGGATAAAAAACTTTCGTCAAGAGGCACATGTCAATAAAAATCA
GTGCGTTGTAGGTATGTTTTCGGGGTAATTTATCAAGCTATTGAACAATA
AATGCCCCACCCCGGGATGCGTGTGGGGGGGAAATT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6434:5775..10360-

>mRNA_L-elsbetiae_contig6434.15106.1 ID=mRNA_L-elsbetiae_contig6434.15106.1|Name=mRNA_L-elsbetiae_contig6434.15106.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=762bp|location=Sequence derived from alignment at L-elsbetiae_contig6434:5775..10360- (Laminarionema elsbetiae ELsaHSoW15)
ATGATCACGAACGCCGCCGTCAAGGCGTACCGCTCCGAGCTGCGCATCTC
CGGGGACCGCTACACCCTTAACTGGCTCGAGAAGTTCATGCACAGGAACG
ACATGGAGGACGGGCCCGGCCTCAAGATGATCACGAACGCCGCCGTCAAG
GCGTACCGCTCCGAGCTGCGCATCTCCGGGGACCGCTACACCCTTAACTG
GCTCGAGAAGTTCATGCACAGGAACGACATGGAGGACGGGCCCGGCCTCA
AGGGCAACGGGCTGGTGGAGGCCATCCTCGACGGGCCCATCGTGGTGATC
AAGGACCCCCGCACCGAGAAGAACCGCGTCATCGACCCCGGCCACATCGG
CAGGCAGCTCATGTCCTTCCGACAGTCGGAGGCCGAGCTCGTGACGGTGG
GCAACGGGCTGGTGGAGGCCATCCTCGACGGGCCCATCGTGGTGATCAAG
GACCCCCGCACCGAGAAGAACCGCGTCATCGACCCCGGCCACATCGGCAG
GCAGCTCATGTCCTTCCGACAGTCGGAGGCCGAGCTCGTGACGGTGGCCA
TGGAGTCCGTCTCGGCGGACCACGTGGCGCTCAACCGGCAGTTCCTGGAG
GAACGCATGCGGGATCAGCTCGAGGAGGTGGTGCTGACACAACGCCGCAA
GTGAGCCATGGAGTCCGTCTCGGCGGACCACGTGGCGCTCAACCGGCAGT
TCCTGGAGGAACGCATGCGGGATCAGCTCGAGGAGGTGGTGCTGACACAA
CGCCGCAAGTGA
back to top