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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1637 |
| Cds size | 1182 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816710.0680103-UTR-L-elsbetiae_contig6434:182..585 | 1622816710.0680103-UTR-L-elsbetiae_contig6434:182..585 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6434 183..585 + |
| 1691683756.9016066-UTR-L-elsbetiae_contig6434:182..585 | 1691683756.9016066-UTR-L-elsbetiae_contig6434:182..585 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6434 183..585 + |
| 1622816710.080117-UTR-L-elsbetiae_contig6434:1903..1954 | 1622816710.080117-UTR-L-elsbetiae_contig6434:1903..1954 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6434 1904..1954 + |
| 1691683756.9128802-UTR-L-elsbetiae_contig6434:1903..1954 | 1691683756.9128802-UTR-L-elsbetiae_contig6434:1903..1954 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6434 1904..1954 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816710.091054-CDS-L-elsbetiae_contig6434:1954..3136 | 1622816710.091054-CDS-L-elsbetiae_contig6434:1954..3136 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6434 1955..3136 + |
| 1691683756.925004-CDS-L-elsbetiae_contig6434:1954..3136 | 1691683756.925004-CDS-L-elsbetiae_contig6434:1954..3136 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6434 1955..3136 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6434.15104.1 >prot_L-elsbetiae_contig6434.15104.1 ID=prot_L-elsbetiae_contig6434.15104.1|Name=mRNA_L-elsbetiae_contig6434.15104.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=394bp
MAATDEALLLSIRQKQGQCTSLDANRGDDDSSCESDEEAVSSPTGLPMRV
VDGNNDLKAGNALGVGGAVNRPIASGPKVGLKRRASGCEDFRSQEGEQGA
GTGVGVSDSSGGGGAGGSGSGGSGGGGNASDASWSSSDESCPPTVRDDVA
TRPRGPAFHGVNRDWDGTSPYGSDDDGVSRAAFLSAGRAEAAEGSSKGPG
TGSKLSPEKGRGQLRRTAREVRSARKAAPAPSLAESSDGTSSGRSIRAAA
RAPTRRMPSKPDQAANKKRTVAVRRGLLRRSLPNPAAAAAETILLSQGEK
HRPATNARSNGATPTSKTPPQSCRGPRAVHGRQSAHDTSRCVGDAMTNSL
AAWEGGVARQKGRPEMGHPRGGGNDSGSRKTLAHQPLGGGQSVT back to topmRNA from alignment at L-elsbetiae_contig6434:183..3136+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6434.15104.1 ID=mRNA_L-elsbetiae_contig6434.15104.1|Name=mRNA_L-elsbetiae_contig6434.15104.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2954bp|location=Sequence derived from alignment at L-elsbetiae_contig6434:183..3136+ (Laminarionema elsbetiae ELsaHSoW15)
AAAGTGGTCAAATATGGCCATTTTTTGCCTGACTACTTTTTTGTTAGCCG
CTAGCCCATGCAAGGTAGTGCGCAAGAAAAAACAATAAAAAAGTGTTTCG
ACCCAAAAAATGCTCAAGATTTCGAAAAAGTTATCGCCGAAGACATCCGA
CACCGTTAACGGTCTCTCCCAACATAACAACTTCCCAGACTTATTGGACA
GAGGAAGTATATCTATTCCACGCCACTCAATCAAGTAGACAGGATCTCAC
TCGCCCCAGGGTCTTCGCGTCCCTTTCTTTGCATCCCCCATCTCGTCAAA
CGCGCAGTCCCGGCATTCCAGCAACACGACCGAAGCGAACCCAAACCATA
GCGTGCCTTTCACGCTCGACCAATTCAACGACATCGTTCGCCAGAAGCTC
CAGGTACGCGAGTCTGCGGAACTCCAGAGGAAATTTGATGCGGCCAGTAG
AGCAGCAGTGGTTGATGCAACGCTCGGCACTCACCACACGGTACCAATTT
ACGACTGCAGAGAGGTGGGCGACATGCACCACCTACCGAGCTTTTGGCAC
GTCGGCCCTCTCTCGGTTTCCGATGCCTCACTCGGGCCAACTAACTGCAC
GACAACTCCCGTTGAGTGCACCGGACTACCACATTTCGATAGCAGTAGAT
CGCGTTTGGCAACCAACCGAAACAGAAGCCTGAGAGAACGCCGGGGTAGT
TGCAAATACTGCCGTTAGTCCATGTGAGATATGTATGTATGTATGTATGT
TGTCTTCACACTAAAAACAGTTCCGATCTCTCCATCCAGTACCTCTCAAT
GTCCGTACTAACCCAACACTTGATGCGGCCAATTTCCGTGGTCCCAGGCT
AACTTATACCTATAAGAAAAGGTACACGAAAAATAAAATGGACCCGAAGG
GCCAGCAAAGCAACAATAAAACAGATATCGGATCTGGAGCCCTCCGCTCC
CCTCTACACGCTGTGTGAGGTAAACACAAAACTGGAACACAGCCAACACC
ACTATCTTGGTACCCCAACAAAGCCGGGGGGTTCCGCGCCGGGTTCTCGC
CGGCCAGGCCCGCACAGGTCTACATAGTCCTCCCCGCAATTATACCACCC
ACCAACAGGGGGTAAAAAATAAACTAAAAATAAAAATAAAACATACCCTC
GGACAGGACACGACGCAGGTCGAGAGTACAAACAAGCAAACAAACAACAA
ACAAACACAACATAACCTTTGACAAAATAAGTCACTCCTCCGGTGGGTGT
AGGCTGGTACAACAACGATGGGAGGGACCCCACCCACAATGGGTAACACC
CCCCATACAAGAAACACACATCCTGTACTTGTGGAATTCGTCACTCTTAT
AAGGGGTACGAACTTCCCACCGTCTGTCGAAGACGTTTCATCCTTATAAC
AACTGCATTTGTTTTTTCCGCGCTGCTAGAAAAGCACTCGAAGTGCACAA
GCACTCTCAGACCAACCGCTCGGGGCACACAAAGATAGCACACCCCTTCC
ACAGAATATCCACCAGTGACAACACTCCCAAACGCCAACTGCATATCTCC
GGGGTGCGTTACCTTGTTTATGGTTCTAAGGCAGCTGAAGAAGCCAACCG
AGTTTCTTTGCTATAATATTCACCATCTCTTCCCCCGTCATAAGATGCCC
GCAAGCGTCTGTCTTGCCACGACGGGAACCAACCACCGAACAAATTTCTG
CACCCATGCCGGCTAACGCAGACCCTCCAGTTGAGCAAGGAGAACGAGGA
GCAGAGGCGAGGTTGGGAGCAGATGGCCGCGACCGACGAGGCTCTGCTGC
TCTCTATTCGCCAAAAACAAGGCCAGTGCACCTCTCTCGACGCCAACCGA
GGTGACGATGACAGCAGTTGCGAGAGTGACGAAGAGGCCGTCAGCTCTCC
CACGGGACTCCCAATGCGCGTCGTCGATGGCAACAACGACTTGAAAGCAG
GCAACGCGCTCGGGGTGGGCGGTGCTGTGAACAGGCCCATCGCCTCCGGA
CCAAAAGTTGGTCTCAAGCGCAGGGCGTCGGGGTGTGAGGACTTCCGCTC
ACAGGAAGGCGAGCAGGGGGCGGGCACTGGTGTTGGGGTGTCCGACTCGT
CGGGCGGCGGCGGCGCTGGCGGCAGCGGCAGCGGCGGCAGTGGTGGCGGT
GGAAACGCAAGCGATGCGAGTTGGTCATCGTCCGACGAAAGTTGTCCTCC
CACCGTCCGTGATGATGTCGCCACACGCCCGCGCGGGCCGGCATTCCACG
GGGTTAACCGCGATTGGGATGGAACGTCGCCGTACGGAAGCGATGACGAC
GGCGTTTCTCGTGCCGCTTTTTTGTCTGCTGGCAGGGCCGAAGCCGCCGA
GGGGTCCAGCAAGGGGCCGGGAACCGGGTCGAAACTGAGCCCCGAGAAGG
GGCGAGGGCAGCTCCGGCGCACAGCGAGAGAGGTAAGAAGTGCTAGGAAG
GCTGCGCCGGCTCCCTCGCTCGCCGAGTCGTCTGACGGCACCTCTTCTGG
AAGAAGCATCCGAGCGGCGGCTCGGGCCCCAACTCGTCGGATGCCGTCGA
AACCAGACCAAGCCGCCAACAAAAAGCGAACCGTCGCCGTGAGAAGGGGG
CTGCTGCGCAGGTCCTTGCCGAACCCGGCGGCGGCGGCGGCGGAAACTAT
ACTGCTGTCGCAGGGTGAAAAGCATCGGCCTGCGACCAACGCACGGAGCA
ACGGAGCAACGCCGACAAGTAAGACCCCGCCCCAATCATGTAGAGGACCA
CGCGCTGTGCACGGTCGGCAGAGTGCGCACGACACCAGCAGATGTGTTGG
CGATGCCATGACGAACAGCCTCGCGGCGTGGGAAGGCGGCGTGGCCCGGC
AGAAAGGGCGGCCGGAAATGGGTCACCCCCGCGGCGGGGGCAACGACAGC
GGGAGCAGAAAAACACTGGCGCACCAGCCTCTTGGAGGTGGGCAGAGTGT
GACA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6434:183..3136+ >mRNA_L-elsbetiae_contig6434.15104.1 ID=mRNA_L-elsbetiae_contig6434.15104.1|Name=mRNA_L-elsbetiae_contig6434.15104.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2364bp|location=Sequence derived from alignment at L-elsbetiae_contig6434:183..3136+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCGCGACCGACGAGGCTCTGCTGCTCTCTATTCGCCAAAAACAAGG
CCAGTGCACCTCTCTCGACGCCAACCGAGGTGACGATGACAGCAGTTGCG
AGAGTGACGAAGAGGCCGTCAGCTCTCCCACGGGACTCCCAATGCGCGTC
GTCGATGGCAACAACGACTTGAAAGCAGGCAACGCGCTCGGGGTGGGCGG
TGCTGTGAACAGGCCCATCGCCTCCGGACCAAAAGTTGGTCTCAAGCGCA
GGGCGTCGGGGTGTGAGGACTTCCGCTCACAGGAAGGCGAGCAGGGGGCG
GGCACTGGTGTTGGGGTGTCCGACTCGTCGGGCGGCGGCGGCGCTGGCGG
CAGCGGCAGCGGCGGCAGTGGTGGCGGTGGAAACGCAAGCGATGCGAGTT
GGTCATCGTCCGACGAAAGTTGTCCTCCCACCGTCCGTGATGATGTCGCC
ACACGCCCGCGCGGGCCGGCATTCCACGGGGTTAACCGCGATTGGGATGG
AACGTCGCCGTACGGAAGCGATGACGACGGCGTTTCTCGTGCCGCTTTTT
TGTCTGCTGGCAGGGCCGAAGCCGCCGAGGGGTCCAGCAAGGGGCCGGGA
ACCGGGTCGAAACTGAGCCCCGAGAAGGGGCGAGGGCAGCTCCGGCGCAC
AGCGAGAGAGGTAAGAAGTGCTAGGAAGGCTGCGCCGGCTCCCTCGCTCG
CCGAGTCGTCTGACGGCACCTCTTCTGGAAGAAGCATCCGAGCGGCGGCT
CGGGCCCCAACTCGTCGGATGCCGTCGAAACCAGACCAAGCCGCCAACAA
AAAGCGAACCGTCGCCGTGAGAAGGGGGCTGCTGCGCAGGTCCTTGCCGA
ACCCGGCGGCGGCGGCGGCGGAAACTATACTGCTGTCGCAGGGTGAAAAG
CATCGGCCTGCGACCAACGCACGGAGCAACGGAGCAACGCCGACAAGTAA
GACCCCGCCCCAATCATGTAGAGGACCACGCGCTGTGCACGGTCGGCAGA
GTGCGCACGACACCAGCAGATGTGTTGGCGATGCCATGACGAACAGCCTC
GCGGCGTGGGAAGGCGGCGTGGCCCGGCAGAAAGGGCGGCCGGAAATGGG
TCACCCCCGCGGCGGGGGCAACGACAGCGGGAGCAGAAAAACACTGGCGC
ACCAGCCTCTTGGAGGTGGGCAGAGTGTGACAATGGCCGCGACCGACGAG
GCTCTGCTGCTCTCTATTCGCCAAAAACAAGGCCAGTGCACCTCTCTCGA
CGCCAACCGAGGTGACGATGACAGCAGTTGCGAGAGTGACGAAGAGGCCG
TCAGCTCTCCCACGGGACTCCCAATGCGCGTCGTCGATGGCAACAACGAC
TTGAAAGCAGGCAACGCGCTCGGGGTGGGCGGTGCTGTGAACAGGCCCAT
CGCCTCCGGACCAAAAGTTGGTCTCAAGCGCAGGGCGTCGGGGTGTGAGG
ACTTCCGCTCACAGGAAGGCGAGCAGGGGGCGGGCACTGGTGTTGGGGTG
TCCGACTCGTCGGGCGGCGGCGGCGCTGGCGGCAGCGGCAGCGGCGGCAG
TGGTGGCGGTGGAAACGCAAGCGATGCGAGTTGGTCATCGTCCGACGAAA
GTTGTCCTCCCACCGTCCGTGATGATGTCGCCACACGCCCGCGCGGGCCG
GCATTCCACGGGGTTAACCGCGATTGGGATGGAACGTCGCCGTACGGAAG
CGATGACGACGGCGTTTCTCGTGCCGCTTTTTTGTCTGCTGGCAGGGCCG
AAGCCGCCGAGGGGTCCAGCAAGGGGCCGGGAACCGGGTCGAAACTGAGC
CCCGAGAAGGGGCGAGGGCAGCTCCGGCGCACAGCGAGAGAGGTAAGAAG
TGCTAGGAAGGCTGCGCCGGCTCCCTCGCTCGCCGAGTCGTCTGACGGCA
CCTCTTCTGGAAGAAGCATCCGAGCGGCGGCTCGGGCCCCAACTCGTCGG
ATGCCGTCGAAACCAGACCAAGCCGCCAACAAAAAGCGAACCGTCGCCGT
GAGAAGGGGGCTGCTGCGCAGGTCCTTGCCGAACCCGGCGGCGGCGGCGG
CGGAAACTATACTGCTGTCGCAGGGTGAAAAGCATCGGCCTGCGACCAAC
GCACGGAGCAACGGAGCAACGCCGACAAGTAAGACCCCGCCCCAATCATG
TAGAGGACCACGCGCTGTGCACGGTCGGCAGAGTGCGCACGACACCAGCA
GATGTGTTGGCGATGCCATGACGAACAGCCTCGCGGCGTGGGAAGGCGGC
GTGGCCCGGCAGAAAGGGCGGCCGGAAATGGGTCACCCCCGCGGCGGGGG
CAACGACAGCGGGAGCAGAAAAACACTGGCGCACCAGCCTCTTGGAGGTG
GGCAGAGTGTGACA back to top
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