mRNA_L-elsbetiae_contig6429.15100.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: D7G110_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G110_ECTSI) HSP 1 Score: 426 bits (1094), Expect = 4.260e-144 Identity = 218/232 (93.97%), Postives = 222/232 (95.69%), Query Frame = 1 Query: 1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPSWSGLLSFLEV 696 RAK YKSDW+DGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGM YAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFL+TLA VGASNLIEFATQFTDDVFNALLSVNFIYEA RSLMRNFSPA AG+TQAGALMSLNVAVATYVGCRKTSGALSS FN G REFMSDFGPLVVIVGMS FCALPSW+GLLSFLEV Sbjct: 228 RAKFYKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWNGLLSFLEV 459
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A6H5KFP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP7_9PHAE) HSP 1 Score: 247 bits (630), Expect = 3.570e-77 Identity = 128/142 (90.14%), Postives = 132/142 (92.96%), Query Frame = 1 Query: 271 TSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPSWSGLLSFLEV 696 TSVAGLPFLPVYAWVGLWTSAFL+TLA V ASNLIEFATQFTDDVFNALLS+NFIYEA RSLMRNF+PA AG+TQAGALMSLNVAVATYVGCRKTSGALSS FN G REFMSDFGPLVVIVGMS FCALPSW GLLSFLEV Sbjct: 10 TSVAGLPFLPVYAWVGLWTSAFLATLAFVEASNLIEFATQFTDDVFNALLSLNFIYEAARSLMRNFNPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGLLSFLEV 151
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A0G4H159_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H159_VITBC) HSP 1 Score: 254 bits (649), Expect = 5.580e-76 Identity = 129/232 (55.60%), Postives = 167/232 (71.98%), Query Frame = 1 Query: 1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPSWSGLLSFLEV 696 R YKSDW DG+ KS+PA++F+YFACL PAVAFGGIA +T G++GV E++V+CG GGMAY+ F GQPMTFIGPTGLTLAF T+LY+F LPF+P+Y+W GLWTS +L LA+ GA LI++ TQFTDDVFNALL+ NF+YEA SL+ NF + G + G L+SLNVA+ATY R+ S + + FN R +SDFGP++ I+ MS LP + + FL+V Sbjct: 184 RRPFYKSDWLDGLRPKSIPAVLFMYFACLAPAVAFGGIAASITGGSMGVPEFLVACGCGGMAYSVFSGQPMTFIGPTGLTLAFTTALYAFCRQWSLPFMPLYSWTGLWTSLWLMLLAVAGAPELIKYCTQFTDDVFNALLACNFVYEAAASLLGNFMRS--GLDKTGPLLSLNVALATYFLARRLSLSYRWRFFNKNIRAILSDFGPVLTIISMSLVATLPLFRSI-EFLKV 412
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A836CJA6_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA6_9STRA) HSP 1 Score: 244 bits (624), Expect = 5.200e-75 Identity = 131/233 (56.22%), Postives = 165/233 (70.82%), Query Frame = 1 Query: 1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPSWSGL-LSFLEV 696 R +YK DW G KSL F+YFACL+PAVAFGG A QVT G +GV+EY+V+CG G+AY+ F GQPMTF GPTGLTLAF+T+L++FTS A LPFLPVY W GLWTSA + LA GASNL+ +ATQFTDDVFNAL+++NF+ EA L RNF AG + GAL+++NVA A+Y+ + + A S FN G RE +SDFGP++ I M+ LP+ S + L FL V Sbjct: 30 RLPLYKDDWKTGFRAKSLSTTAFMYFACLMPAVAFGGFAQQVTGGAMGVVEYLVACGGSGVAYSLFSGQPMTFTGPTGLTLAFITALHAFTSAAALPFLPVYTWCGLWTSALMVALAAGGASNLVRYATQFTDDVFNALIALNFLAEACGGLARNFKLGGAGGS-GGALLAVNVAGASYLLTQALTQARGSVYFNKGVREQVSDFGPVLAIAAMTAVSHLPAVSSIGLDFLSV 261
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A7S1TE13_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE13_9RHOD) HSP 1 Score: 225 bits (574), Expect = 7.270e-69 Identity = 112/222 (50.45%), Postives = 151/222 (68.02%), Query Frame = 1 Query: 1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPS 666 R +Y SDW +G+ KS+PA+MFLYFACL P +AFGG+ +T G +G++E++VS + GMAYAAF GQP+T IGPTGLTLAF T+LYSF GLPFLP+Y+WVGLWT A L L + AS++I + T+FTDDVFN+L++ NF+YEA RSL F + G + M+L++A+ TY+ R + ++ REF +DFGP + I MS LPS Sbjct: 84 RVPLYVSDWKEGLTLKSIPAVMFLYFACLAPVIAFGGLTATLTGGAIGLVEFLVSASVAGMAYAAFSGQPLTLIGPTGLTLAFTTALYSFCGRYGLPFLPMYSWVGLWTGAILFFLVIFNASDMIRYCTRFTDDVFNSLIATNFLYEASRSLASGFKSS--GSDKTKPFMALSLALGTYILGRSLAEFRRTRFLRRSVREFFADFGPTIAITAMSALSLLPS 303
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: W7TSJ0_9STRA (Anion exchanger family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSJ0_9STRA) HSP 1 Score: 232 bits (592), Expect = 7.370e-69 Identity = 120/226 (53.10%), Postives = 160/226 (70.80%), Query Frame = 1 Query: 1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPSWSGL 678 R +YKSDW DGV K+LP I+FLYFACL PAVAFGGI+ +TQG +GVIE++VSCG+ GM YA F GQPMTFIGPTGLTL FM +L++F S G+ F+P+Y WVG+WTS L L+ A +L + T+FTD+VFNALL++NFIYEA++++ F TQ L++LN+A+AT+ ++ SS +F REF+SDFGP + I+ M+F +LP S L Sbjct: 177 RLPLYKSDWVDGVKGKTLPTILFLYFACLAPAVAFGGISYGLTQGAMGVIEFLVSCGMSGMLYAIFSGQPMTFIGPTGLTLCFMAALFNFCSSFGVAFMPMYTWVGIWTSLMLGLLSSANACSLTKHCTRFTDEVFNALLALNFIYEALKNIAVRFFTTGTDKTQP--LLALNMALATFALSQRLVSYRSSILFTHRIREFLSDFGPALTIIIMTFVGSLPMVSSL 400
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A7S1TD95_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD95_9RHOD) HSP 1 Score: 225 bits (574), Expect = 6.800e-67 Identity = 112/222 (50.45%), Postives = 151/222 (68.02%), Query Frame = 1 Query: 1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFFCALPS 666 R +Y SDW +G+ KS+PA+MFLYFACL P +AFGG+ +T G +G++E++VS + GMAYAAF GQP+T IGPTGLTLAF T+LYSF GLPFLP+Y+WVGLWT A L L + AS++I + T+FTDDVFN+L++ NF+YEA RSL F + G + M+L++A+ TY+ R + ++ REF +DFGP + I MS LPS Sbjct: 84 RVPLYVSDWKEGLTLKSIPAVMFLYFACLAPVIAFGGLTATLTGGAIGLVEFLVSASVAGMAYAAFSGQPLTLIGPTGLTLAFTTALYSFCGRYGLPFLPMYSWVGLWTGAILFFLVIFNASDMIRYCTRFTDDVFNSLIATNFLYEASRSLASGFKSS--GSDKTKPFMALSLALGTYILGRSLAEFRRTRFLRRSVREFFADFGPTIAITAMSALSLLPS 303
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A7S2YSC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSC6_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.130e-66 Identity = 118/218 (54.13%), Postives = 149/218 (68.35%), Query Frame = 1 Query: 1 RAKVYKSDWTDGVN--RKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPA-VAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMS 645 R VYKSDW DG +K PAI FLYFACL PAV+FG I++ +T TLG++EY++S L GMAY+ GQPM FI PTGLTLAF++ LY F + GLPF P+Y+WVG+WTS L L GA +LI F T+FTD+VFNALLS+NFIYEAVRSL RNF+ A + T +SL++A T+ +T+ S+ FN R F+ DFGP+ V V MS Sbjct: 144 RRAVYKSDWVDGFKDLKKCFPAISFLYFACLAPAVSFGTISSLITHNTLGIVEYMLSTSLSGMAYSLICGQPMAFIAPTGLTLAFISGLYRFCTQKGLPFFPIYSWVGIWTSVLFIILGLGGAGSLIRFCTRFTDEVFNALLSLNFIYEAVRSLRRNFAEADPSNLTMP--FVSLSIAWGTWFLTARTAAFEYSRFFNQKVRTFVKDFGPVSVFVAMS 359
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: B7FQY4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQY4_PHATC) HSP 1 Score: 226 bits (576), Expect = 1.430e-66 Identity = 122/219 (55.71%), Postives = 151/219 (68.95%), Query Frame = 1 Query: 1 RAKVYKSDWTDGVN--RKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNFSPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMSFF 651 R KVY SDW DG RK +PAI+FLYFACL PAV+FG IA+++TQG++G++E+++S GL GMAYA GQPM FI PTGLTLAF++ LY F V LPF P+YAWVGLWTS F L L G+S LI F T+FTD+VFNALLSVNFIYEAV SL RNF A +SL +A++T+ K + SSK N R + DFGP+ + + MS F Sbjct: 175 RKKVYWSDWEDGFKNKRKVIPAILFLYFACLSPAVSFGTIASEITQGSIGIVEFLLSSGLSGMAYAMMCGQPMAFIAPTGLTLAFISGLYRFCMVKALPFFPIYAWVGLWTSFFFVLLGLGGSSQLIRFCTRFTDEVFNALLSVNFIYEAVASLKRNFDLADP-MNLTMPFVSLAMALSTFWCTAKVAAFESSKYLNQKIRSIVKDFGPVTIFILMSIF 392
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Match: A0A7S3XU83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU83_HETAK) HSP 1 Score: 217 bits (552), Expect = 3.640e-64 Identity = 110/216 (50.93%), Postives = 151/216 (69.91%), Query Frame = 1 Query: 1 RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMAYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLSTLALVGASNLIEFATQFTDDVFNALLSVNFIYEAVRSLMRNF-SPAVAGFTQAGALMSLNVAVATYVGCRKTSGALSSKVFNSGFREFMSDFGPLVVIVGMS 645 R ++ DW DG+ +++ A +FLYFACL PAVAFGG++ +T G LGV+E +++ G GG AY+ GQPMTFIGPTGLTL F +L+SF ++ GLPFLP+++WVGLWTS FL+ L+ GASN I++ TQFTDDVFN+LL+VNF+YEA+RSL NF + A AG Q A SLN+A+A Y R+ + ++ + R +D GP+ I +S Sbjct: 47 RLPLWVQDWRDGLAPQTVAASLFLYFACLAPAVAFGGLSAALTGGQLGVVEVLMATGFGGAAYSFLSGQPMTFIGPTGLTLVFTAALHSFCALRGLPFLPMFSWVGLWTSGFLALLSATGASNGIKYCTQFTDDVFNSLLAVNFVYEALRSLWGNFRAAAAAGADQTSAFFSLNLALAYYALSRRVTAFRGTRYLSEQLRGVAADLGPVAAIFALS 262 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6429.15100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6429.15100.1 >prot_L-elsbetiae_contig6429.15100.1 ID=prot_L-elsbetiae_contig6429.15100.1|Name=mRNA_L-elsbetiae_contig6429.15100.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp RAKVYKSDWTDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIback to top mRNA from alignment at L-elsbetiae_contig6429:593..9315- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6429.15100.1 ID=mRNA_L-elsbetiae_contig6429.15100.1|Name=mRNA_L-elsbetiae_contig6429.15100.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8723bp|location=Sequence derived from alignment at L-elsbetiae_contig6429:593..9315- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6429:593..9315- >mRNA_L-elsbetiae_contig6429.15100.1 ID=mRNA_L-elsbetiae_contig6429.15100.1|Name=mRNA_L-elsbetiae_contig6429.15100.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1392bp|location=Sequence derived from alignment at L-elsbetiae_contig6429:593..9315- (Laminarionema elsbetiae ELsaHSoW15)back to top |