mRNA_L-elsbetiae_contig6427.15098.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Match: D8LGP2_ECTSI (LIP1, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP2_ECTSI) HSP 1 Score: 297 bits (760), Expect = 1.410e-94 Identity = 188/384 (48.96%), Postives = 225/384 (58.59%), Query Frame = 3 Query: 78 MQEASTNNFDPNHARVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPSPTIGCNVDVKLLARGYADRSVEFWDVGGNPDAALARGMFFEDSDAAGVILVYDVSNPRSLREVRAWADELASAGVRILGSGGAPAANTWGGSEGGTKPRHQDRQDDLEXXXXXXXXXXXXXXXXGT-------VPFLMVGTKEDIGEGVRRQGARLASELGVEHVAVCARRLVNEEP--FDVFFGEVFRHHAGQQMPVRSLGVTRSLVLSRAVPGWGVSSQEQQDAYFPSTTTPGVSADE--RSSSSRRQRLSAG--WGSESPRGTAPQPQ-GYGMTVKGSWKRPGSASARDVD-RFEGGTSERSGDVAARVANAGAGLVWPVHHGGNPAATA 1184 M ++ NFDP+HARVLVVGPMA+GKTTLV S CHGG G GV PT+GC+VDVKLLA G+ +RS+EFWDVGG+PDAALARGMFFE +AAGV+LVYDVS PRSLR++R W EL SAG+ ILG G ++ S G R + GT VP ++VG K D GEGVRR+G LASELGV HVAVCA +L NEE FD FFGEVFRHH+G Q P V + L + +PG + E +D+YFPS+ T +A + RSS R R S WGS+ P G+ PQ G G W G AR D R EG +G A+ V G GLVWPVH G P+A A Sbjct: 1 MDASAGKNFDPHHARVLVVGPMAAGKTTLVHSFCHGGGGN----GVPGNTLPTVGCSVDVKLLAGGHPNRSIEFWDVGGSPDAALARGMFFEGCEAAGVLLVYDVSIPRSLRDLRVWVAELDSAGISILGKSGNNGRSSATASSSGRSLRSGRSTEYPPDFFSEGLAADLEGGGSGTAAVGGGRVPLIVVGAKADTGEGVRREGGALASELGVGHVAVCASKLSNEEEALFDRFFGEVFRHHSGLQAPPLGEDVQKMLSFAEGMPGRLEETYESEDSYFPSSETTAAAAGDGGRSSLHTRHRPSGSSRWGSDQPPGSNPQRDAGIG------WTGIGHPDARGDDGRVEGEARGWAGGGASTV---GGGLVWPVHRGALPSAVA 371
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Match: A0A6H5JCT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT8_9PHAE) HSP 1 Score: 209 bits (532), Expect = 2.040e-62 Identity = 118/222 (53.15%), Postives = 141/222 (63.51%), Query Frame = 3 Query: 78 MQEASTNNFDPNHARVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPSPTIGCNVDVKLLARGYADRSVEFWDVGGNPDAALARGMFFEDSDAAGVILVYDVSNPRSLREVRAWADELASAGVRILG--------SGGAPAANTWGGSEGGTKPRHQDRQDDLEXXXXXXXXXXXXXXXXGTVPFLMVGTKEDIGEGVRRQGARLASELGVEHVAVCAR 719 M ++ NFDP+HAR+LVVGPMA+GKTTLV S CHGG G GV PT+GC+VDVKLLA G+ +RS+EFWDVGG PDAALARGMFFE +AAGV+LVYDVS PRSLR++R W EL SAG+ +LG S AP A + +E + DLE G +P ++VG K D GEGVRR+G LASELG HVAV R Sbjct: 1 MDASAGKNFDPHHARILVVGPMAAGKTTLVHSFCHGGVGN----GVPGNRLPTVGCSVDVKLLAGGHPNRSIEFWDVGGRPDAALARGMFFEGCEAAGVLLVYDVSTPRSLRDLRVWVAELDSAGISVLGESDNNGRSSATAPYARSLRSTEHPPYFFSEGLTADLEGGGSGTAAVGG-----GRIPLMVVGAKADTGEGVRREGGALASELGAGHVAVKVR 213
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Match: A0A7C9DTW9_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DTW9_OPUST) HSP 1 Score: 73.9 bits (180), Expect = 6.090e-11 Identity = 50/134 (37.31%), Postives = 69/134 (51.49%), Query Frame = 3 Query: 120 RVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPSPTIGCNVDVKLL-------------ARGYADRSVEFWDVGGNPDAALARGMFFEDSDAAGVILVYDVSNPRSLREVRAWADELASAGV--RILGSGG 476 RVLVVG GKT+LV + G + S+PSPTIGC+VDVK + A D VE WD+ G+ R +F+ S G+I VYD+S R+ ++ WA+E+A+ G +GSGG Sbjct: 24 RVLVVGDSGVGKTSLVHLITKGSS--------ISRPSPTIGCSVDVKHITYASPSSSSNSVKADAERDFFVELWDISGHDRYKDCRSIFY--SQINGIIFVYDLSQRRTKTSLKKWAEEIAATGTFSAPMGSGG 147
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Match: B3S9L3_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S9L3_TRIAD) HSP 1 Score: 68.9 bits (167), Expect = 9.500e-10 Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 3 Query: 105 DPNHARVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPSPTIGCNVDVKLLARGYADRS-------VEFWDVGGNPDAALARGMFFEDSDAAGVILVYDVSNPRSLREVRAWADE 437 D + R+LV+G GKTTL+ LCH S P TIGC++ VK+ Y D +E +DVGG+ A +RG+F+ + G+ILV+D+SN +SL +R W E Sbjct: 2 DVDKVRILVLGDSGVGKTTLIHLLCH--------QEFLSNPYWTIGCSIHVKV--HEYGDNRHGNKPYFLELFDVGGSSSHAASRGIFY--NVIHGIILVHDLSNRKSLMNLRKWLQE 107
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Match: Q54LP6_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54LP6_DICDI) HSP 1 Score: 69.3 bits (168), Expect = 4.210e-9 Identity = 38/110 (34.55%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 111 NHARVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPSPTIGCNVDVKLLARGYADRSVEFWDVGGNPDAALARGMFFEDSDAAGVILVYDVSNPRSLREVRAWADEL 440 + RVLV+G A GK++LV +C+ + PS T+GCN DVK+ D +EF D+GG+ + R + + +G+I+VYD++N SL+ V+ W E+ Sbjct: 52 DRVRVLVIGDTAVGKSSLVHLICND-------QALTRSPSWTVGCNTDVKIHEYHSKDYYIEFIDIGGSTKYKITRPILYHQ--ISGIIVVYDLTNKISLKNVKKWIFEV 152
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Match: L8GMJ7_ACACA (Ras subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GMJ7_ACACA) HSP 1 Score: 66.2 bits (160), Expect = 1.490e-8 Identity = 38/103 (36.89%), Postives = 54/103 (52.43%), Query Frame = 3 Query: 120 RVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPSPTIGCNVDVKLLARGYADRSVEFWDVGGNPDAALARGMFFEDSDAAGVILVYDVSNPRSLREVRAW 428 RVLVVG GKT L +C G V S TIGC+ +VK+ +EFWD+GG+ A +RG+ F G+ILV+D++N +S + + W Sbjct: 20 RVLVVGDSGIGKTVLSHLVCKGE--------VLPNSSYTIGCSTEVKIHEFKGRPYYIEFWDLGGSKKYAESRGVVFNHLSINGLILVHDLTNRKSYKNIGLW 114
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Match: L1I819_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I819_GUITC) HSP 1 Score: 63.9 bits (154), Expect = 5.840e-8 Identity = 47/132 (35.61%), Postives = 68/132 (51.52%), Query Frame = 3 Query: 120 RVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPSPTIGCNVDVKL----LARGYADRSVEFWDVGGNPDAALARGMFFEDSDAAGVILVYDVSNPRSLREVRAWADELASAGVRILGSGGAPAAN-TWG 500 R+LV+G GKT+L+ +C G +P T+GC V +KL L G VEFWD+GG+ +R +F+ ++ GVILV+DV+N S R + W E G+GGA + + TWG Sbjct: 12 RLLVMGDSGVGKTSLMHLICEGEE--------LRRPRSTVGCTVHMKLHESKLLPGKT-AFVEFWDLGGSARFQTSRQVFYSNA-VDGVILVHDVTNSISRRNLEKWKQEWTQ---HASGAGGAGSWDRTWG 130
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Match: A0A1Y1WPA2_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1WPA2_9FUNG) HSP 1 Score: 59.7 bits (143), Expect = 1.990e-7 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 3 Query: 111 NHARVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPSPTIGCNVDVKLLARGYADRS--VEFWDVGGNPDAALARGMFFEDSDAAGVILVYDVSNPRSLREVRAWADEL 440 N ++LVVG + GKT+L+ LC V+ S TIGC++D+KL +R+ +EF + +R MF++D G+ILV+D+SN +S + + W E+ Sbjct: 5 NSLKILVVGDPSVGKTSLINILCQNE--------VKKNTSWTIGCHLDIKLFNYEKTNRNYYLEFIETNNRCKHPKSREMFYKD--IKGIILVHDLSNNKSYKNLWKWLQEI 106
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Match: A0A443Q6I1_9ACAR (Rab-like protein 3 (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A443Q6I1_9ACAR) HSP 1 Score: 59.7 bits (143), Expect = 2.720e-7 Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 3 Query: 120 RVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPSPTIGCNVDVKLLARGYA---DRS--VEFWDVGGNPDAALARGMFFEDSDAAGVILVYDVSNPRSLREVRAWADELASA 449 +VLV+G GK++ V +CH + S + TIG VDVKL RS +E WD+GG A AR +F+ G+ILV+D++N +SL+ +R W E+ SA Sbjct: 8 KVLVLGDCGVGKSSFVHLICH--------SHAISAVNWTIGAVVDVKLHEFNEGTPHQRSFLIELWDIGGYKTHAAARSVFYHSFH--GIILVHDLTNRKSLQNLRKWMCEVYSA 112
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Match: J3JWK4_DENPD (Uncharacterized protein n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=J3JWK4_DENPD) HSP 1 Score: 61.6 bits (148), Expect = 3.240e-7 Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 3 Query: 120 RVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPSPTIGCNVDVKL--LARGYADRS---VEFWDVGGNPDAALARGMFFEDSDAAGVILVYDVSNPRSLREVRAWADELASAGVRILGSGGAPA 485 +V+V+G GKT+ V H ++S PS T+GC V+VKL G D+ VEFWDVGG+ + +R +F+ + G ILV+D++N S + ++ W EL G + S G+ A Sbjct: 8 KVMVLGDSGVGKTSFVHLAAHNEP-------IKS-PSWTVGCTVEVKLHEFKEGTKDQKTYFVEFWDVGGSKNHENSRPVFYHPCN--GAILVHDLTNRNSEKNLQKWLKELLIHGSFVECSSGSSA 124 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6427.15098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6427.15098.1 >prot_L-elsbetiae_contig6427.15098.1 ID=prot_L-elsbetiae_contig6427.15098.1|Name=mRNA_L-elsbetiae_contig6427.15098.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=369bp MQEASTNNFDPNHARVLVVGPMASGKTTLVQSLCHGGTGGTAAAGVRSKPback to top mRNA from alignment at L-elsbetiae_contig6427:1123..4211- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6427.15098.1 ID=mRNA_L-elsbetiae_contig6427.15098.1|Name=mRNA_L-elsbetiae_contig6427.15098.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3089bp|location=Sequence derived from alignment at L-elsbetiae_contig6427:1123..4211- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6427:1123..4211- >mRNA_L-elsbetiae_contig6427.15098.1 ID=mRNA_L-elsbetiae_contig6427.15098.1|Name=mRNA_L-elsbetiae_contig6427.15098.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2214bp|location=Sequence derived from alignment at L-elsbetiae_contig6427:1123..4211- (Laminarionema elsbetiae ELsaHSoW15)back to top |