mRNA_L-elsbetiae_contig6418.15092.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6418.15092.1
Unique NamemRNA_L-elsbetiae_contig6418.15092.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Match: D7FUX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX5_ECTSI)

HSP 1 Score: 772 bits (1993), Expect = 6.680e-265
Identity = 487/675 (72.15%), Postives = 517/675 (76.59%), Query Frame = 1
Query:    1 AATTGLEGPSAPALDGSSEDEAEASSRAATGAEGGDAQGWGGAVEDNVAFQFSLGPAKTAVVLVITEEDVSNVLELAQGTGLANKDPADVAAALLAASENPKAKKGAKAAXXXXXXAAGRRGLLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFYAFDFDGGATVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSSACQAKAQAKVVEDVDSIAAWTSNLIFQSPALAVQDSLSFDELAAWYTQVGYKVAPWLELLDLNKWAVGAAASSAANGNSS-KGPQMRAHSKAKPMVPPGKPLIAEPKPPGLPTSRDRANGNGVTRAGAAGAPGALAAYAVKKKGSSGNGERSVAAAEEVVAGGADGVAAQAEXXXXXXXXXXXXXXXXXXXXXXXX---------------DGPAGAAVGGQVLDGDGDNTASLSQVLFTFPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDKSTPGPRGKEVSKASFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRAQEGKVLLRDLACGLSFLCCGSKSSKLAFAYSLFGGGGRVPS---GGGQKGHRAIKDGKGASAEGXXXXXXXXXXXXXXXXXXXEVSREAIGAFVSGLLTVLCSCVGQMLELTNREV 1968
            AATTGLEGPSAPALD S +DE +A   AA G EGG+A+GWGGA+EDNVAFQFSLGPAKTAVVL ITEEDVSNVLELAQGTGLANKDPADVAAALLAASEN KAKK  KAA         RRG+LSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVF+AFDFDG A+ DARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFS ACQAK+QAKVVEDVDSIAAW+SNLIFQSP L ++DSLSFDELAAWYTQ GYKVAPWLELLDLNKWAVGA  ++   G S   GPQMR H++ K MVPPGKPLIAEPKPP                                   S     R+V +A       A G      XX     XXXXXXXXXXXXXXXXX               + PAG    G+  DG  + T   SQVLFTFPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDK+T GPRGKEV+K +FDTGMQELVRLQSMLEDERDLLSFALANIFFAYDR QEG+VLLRDLACGLSFLCCGSKSSKLAFAYSLFGGGGR P     GG++     +DG G+S      XXXXXX          EVSREAIGAFVSGLLTVLCSCVGQMLELTNRE+
Sbjct:  242 AATTGLEGPSAPALDKSGDDETQA---AAAGGEGGEAEGWGGAMEDNVAFQFSLGPAKTAVVLTITEEDVSNVLELAQGTGLANKDPADVAAALLAASENTKAKKVNKAAGGGG---VARRGMLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFFAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWSSNLIFQSPNLVMRDSLSFDELAAWYTQEGYKVAPWLELLDLNKWAVGATGNAPGGGRSGGNGPQMRQHAQPKTMVPPGKPLIAEPKPPTXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXNSXXXAGRNVGSAXXXXXXQAAGXXXXXXXXGQSALXXXXXXXXXXXXXXXXXXXXXXAGMKESNGLNERPAGGEGAGE-FDGGSNPT---SQVLFTFPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDKATSGPRGKEVTKEAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRMQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLFGGGGRSPQEGEAGGRQERATSRDGTGSSXX----XXXXXXWGEGGFDAEGEVSREAIGAFVSGLLTVLCSCVGQMLELTNREM 900          
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Match: A0A6H5JYX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX4_9PHAE)

HSP 1 Score: 735 bits (1897), Expect = 3.200e-250
Identity = 472/697 (67.72%), Postives = 504/697 (72.31%), Query Frame = 1
Query:    1 AATTGLEGPSAPALDGSSEDEAEASSRAATGAE------GG-----DAQGWGGAVEDNVAFQFSLGPAKTAVVLVITEEDVSNVLELAQGTGLANKDPADVAAALLAASENPKAKKGAKAAXXXXXXAAGRRGLLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFYAFDFDGGATVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSSACQAKAQAKVVEDVDSIAAWTSNLIFQSPALAVQDSLSFDELAAWYTQVGYKVAPWLELLDLNKWAVGAAASSAANGNSS-KGPQMRAHSKAKPMVPPGKPLIAEPKPP--------------------------GLPTSRDRANGNGVTRAGAAGAPGALAAYAVKKKGSSGNGERSVAAAEEVVAGGADGVAAQAEXXXXXXXXXXXXXXXXXXXXXXXXDGPAGAAVGGQVLDGDGDNTASLSQVLFTFPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDKSTPGPRGKEVSKASFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRAQEGKVLLRDLACGLSFLCCGSKSSKLAFAYSLFGGGGRVPSGGGQKGHR---AIKDGKGASAEGXXXXXXXXXXXXXXXXXXXEVSREAIGAFVSGLLTVLCSCVGQMLELTNREV 1968
            AATTGLEGPSAPALD S +DE +A++             GG       +GWGGA+EDNVAFQFSLGPAKTAVVL ITEEDVSNVLELAQGTGLANKDPADVAAALLA SE+ KAKK  KAA         RRG+LSKNAFDHCIRGLVPGRRLSQGQK+RFSGLLSA FYAFDFDG A+ DARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQL+REGVWRFLRSLLSILMGFS ACQAK+QAKVVEDVDSIAAWTSNLIFQSP L ++ SLSFDELAAWYT  GYKVAPWLELLDLNKWAVGA  ++   G     GPQMR H + K MVPPGKPLIAEPKPP                                                              +  G+ ++ A  E  A G  G      XXXXXXXXXXXXXXX         + PAG    G   D DG +  + SQVLFTFPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDK+T GPRGKEV+K +FDTGMQELVRLQSMLEDERDLLSFALANIFFAYDR QEG+VLLRDLACGLSFLCCGSKSSKLAFAYSLFGGGGR P  GG +G +    I  G G SA+         XXXXX       VSREAIGAFVSGLLTVLCSCVGQMLELTNRE+
Sbjct:  231 AATTGLEGPSAPALDKSGDDETQAAAAVRVVMSPSFIVVGGMLELAKREGWGGAMEDNVAFQFSLGPAKTAVVLTITEEDVSNVLELAQGTGLANKDPADVAAALLATSESTKAKKVNKAAGGGG---VARRGMLSKNAFDHCIRGLVPGRRLSQGQKQRFSGLLSAAFYAFDFDGSASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIFQSPKLVMRASLSFDELAAWYTHEGYKVAPWLELLDLNKWAVGAMGNAPGGGRGGGNGPQMRQHVQPKTMVPPGKPLIAEPKPPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAATGQSALTAYGE--AAGTKGX--XXXXXXXXXXXXXXXXXXCMKESNGLNERPAGGESAG---DFDGGSNPT-SQVLFTFPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDKATSGPRGKEVTKEAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRMQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLFGGGGRSPQEGGAEGRQERATIIAGTGPSAD----WGGGAXXXXXELDAEGVVSREAIGAFVSGLLTVLCSCVGQMLELTNREM 912          
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Match: A0A7S3XMH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMH2_HETAK)

HSP 1 Score: 203 bits (517), Expect = 9.150e-58
Identity = 108/229 (47.16%), Postives = 144/229 (62.88%), Query Frame = 1
Query:  187 LVITEEDVSNVLELAQGTGLANKDPADVAAALLAASENPKAKKGAKAAXXXXXXAAGRRGLLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFYAFDFDGGATVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSSACQAKAQAKVVEDVDSIAAWTSNLIFQSPALAVQDSLSFDELAAWYTQVGYKVAPWLELLDLNKW 873
            L +T  DV+ V  LA  TGL  +DP  V   LLA +E                      GLLSK  FD C+R L+P + L+  +K  FS LLSA+FYA+D DG + VD  +   GF LLC+GNKS KLA AF LLDEDGD +L+R G+WRFLR+ LS+LM  SS   +   +++V+ +D+ A WT+  IF+   LA ++ + F+ELAAWYT+ GY+++PWLELLDL KW
Sbjct:    2 LALTAADVARVQRLAARTGLRGRDPRAVCGGLLAFAEE---------------------GLLSKKQFDRCVRRLIPAQSLTAEEKAEFSALLSALFYAYDRDGSSQVDVLEFMGGFALLCAGNKSGKLAYAFDLLDEDGDGRLSRRGLWRFLRAFLSVLMSMSSKASSMEASELVDLIDNGAVWTAATIFEQCDLAEKNKIDFEELAAWYTEGGYRLSPWLELLDLKKW 209          
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Match: A0A6U1MRH8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MRH8_9STRA)

HSP 1 Score: 165 bits (417), Expect = 4.590e-43
Identity = 101/244 (41.39%), Postives = 137/244 (56.15%), Query Frame = 1
Query:  181 VVLVITEEDVSNVLELAQGTGLANKDPADVAAALLAASENPKAKKGAKAAXXXXXXAAGRRGLLSKNAFDHCIRGLVP----GRRLSQGQ-------KERFSGLLSAVFYAFDFDGGATVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSSACQAKAQAKVVEDVDSIAAWTSNLIFQSPALAVQDSLSFDELAAWYTQVGYKVAPWLELLDLNKWAV 879
            V L ++E DV  V +LA  TG +  DP  V   L+  S++                     GLLSK  FD  +  LVP    G  L +G+       +  F  LLS++FYA+D D  + VD  + +SGF LLC G+KS KL+ AF LLDED D +L+R G+WR+LRS L++LMG S A    +  ++V  +DS A   + +I+Q      ++ +SF+ELAAWYT  GY  APWLELLDL KW V
Sbjct:   22 VALALSELDVHLVTQLAHRTGFSQMDPQKVCPVLMEYSDD---------------------GLLSKREFDRFLSELVPDLFGGGPLMEGEPPMTDEERSAFGSLLSSIFYAYDRDSTSQVDVLEFSSGFSLLCHGSKSTKLSYAFDLLDEDEDQKLSRRGLWRYLRSFLTVLMGASLANSGLSGEELVWAIDSGAVHAAAVIYQETEREEKNKISFEELAAWYTNGGYWFAPWLELLDLKKWLV 244          
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Match: A0A836CCD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.450e-39
Identity = 97/263 (36.88%), Postives = 136/263 (51.71%), Query Frame = 1
Query:  109 AQGWGGAVEDNVAFQFSLGPAKTAVVLVITEEDVSNVLELAQGTGLANKDPADVAAALLAASENPKAKKGAKAAXXXXXXAAGRRGLLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFYAFDFDGGATVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSSACQAKAQAKVVEDVDSIAAWTSNLIFQSPALA-VQDSLSFDELAAWYTQ-------VGYKVAPWLELLDLNKW 873
            A+  G + +    F F +  +  A  L I E D   V+EL   TGLA  +P  +  ALL A++                      G LSK AFD C++ L  G +L   ++ R + LLS+++YAFD      VDA +LA+GF +LC GNKS KL  A+ LL  D D  LTR G+WR++RS L++LM  SSA       ++   VD  A W S  +F     A     ++F +LA WYT+        G+  +PWLELLD++KW
Sbjct:   28 ARATGASAQPAPRFYFQISESSAATPLSIEENDARAVMELVDRTGLARAEPQRICGALLRAAD--------------------AEGALSKRAFDQCMQVLALGAQLKAQERTRCAVLLSSIYYAFDRGNDGRVDALELATGFSILCGGNKSSKLVYAWDLL-ADADGALTRRGLWRYMRSFLTVLMALSSASGTLTAKELTRAVDDSAVWVSARVFADLRAADAATRITFTDLADWYTEGLERSAAPGFMTSPWLELLDMSKW 269          
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Match: A0A7S0GD91_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GD91_9STRA)

HSP 1 Score: 147 bits (372), Expect = 9.090e-37
Identity = 95/263 (36.12%), Postives = 140/263 (53.23%), Query Frame = 1
Query:  121 GGAVEDNVAFQFSLGPAKTAVVLVITEEDVSNVLELAQGTGLANKDPADVAAALLAASENPKAKKGAKAAXXXXXXAAGRRGLLSKNAFDHCIRGLVP--GRRLSQGQKERFSGLLSAVFYAFDFDGGATVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSSACQAKAQAKVVEDVDSIAAWTSNLIF---QSPALAVQD-----SLSFDELAAWYTQVGYKVAPWLELLDLNKWAV 879
            GG+  D + F           ++ IT++ V+ + +L Q +G   ++  +V   LL   +N  A  G                LLSK+ +D+ +R +V   G  +SQ  + R S LLS++F+AF  D  + V A +LASGF +LC G KS KL  AF L+D+D D +L+R G+W++LRS L++LM  SSA     +  +   +DS + W +  +F   Q   L   D     S+ FD+ A WYTQ GY   PWLELLDL KW +
Sbjct:    3 GGSGSD-LKFHLHTNDTHGGYLVSITQDRVTRLRQLIQESGFDRRNVHEVTQVLL---QNSNANTG----------------LLSKDQYDNAMRNIVSNGGGSMSQESQRRLSDLLSSIFFAFVRDKSSRVVALELASGFTVLCGGRKSDKLEFAFDLIDDDKDGRLSRRGLWKYLRSFLTVLMSISSASANMTEGHIYSAIDSASTWATAQVFGAEQDKGLGNNDNSSKRSVCFDDFAEWYTQGGYGSIPWLELLDLKKWVL 245          
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Match: A0A7S3Y3W7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3W7_HETAK)

HSP 1 Score: 137 bits (345), Expect = 4.970e-33
Identity = 79/169 (46.75%), Postives = 99/169 (58.58%), Query Frame = 1
Query:  397 IRGLVPGRRLSQGQKERFSGLLSAVFYAFDFDGGATVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSSACQAKAQAKVVEDVDSIAAWTSNLIFQ---SPALAVQ-------DSLSFDELAAWYTQVGYKVAPWLELLDLNKW 873
            +R LVP   L+  +++RFS LL+ VF  FD +    VD  +  +GF L C+G+KSVKLA AF LLDE     LTR GVWRF RS+LS+L    S+       ++   VD  A WT+   F     PA A         + LSFD+LAAWYT  GY+V PWLELLDL KW
Sbjct:    2 LRRLVPVEALAARERDRFSTLLATVFLVFDREARMEVDVLEFIAGFVLFCAGSKSVKLAYAFELLDEQSLGYLTRRGVWRFFRSILSMLAALCSSLLDVPTEELQARVDDGAVWTTARAFSYRGPPAAAAAPERERDPNRLSFDDLAAWYTGGGYQVCPWLELLDLRKW 170          
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Match: A0A812UYR4_SYMMI (Calmodulin (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UYR4_SYMMI)

HSP 1 Score: 134 bits (337), Expect = 7.050e-30
Identity = 87/266 (32.71%), Postives = 133/266 (50.00%), Query Frame = 1
Query:  133 EDNVAFQFSLGPAKTAVVLVITEEDVSNVLELAQGTGLANKDPADVAAALLAASENPKAKKGAKAAXXXXXXAAGRRGLLSKNAFDHCIRGLVPGRR----------LSQGQ------KERFSGLLSAVFYAFDFDGGATVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSSACQAKAQAKVVEDVDSIAAWTSNLIFQSPALAVQD---SLSFDELAAWYTQVGYKVAPWLELLDLNKW 873
            E+  AF   L       V+ I+ + V  V  L+  +GLAN +P  +  A+LA S +                      L+++  FD  I+ + P RR           ++G+       E+ S  L ++F +FD  G   VDA ++A G  +LCSG+KS KLASAF LLDE+    L+R  +W+F RS L  L+  S A Q  +  ++    D  A +  + +  SP    ++   + +FD++A WYT  GY++APWLELLD+ KW
Sbjct:  243 EEPYAFTLMLYRRNAKHVVSISTDSVETVRTLSVASGLANIEPEQIGQAVLACSSSDL--------------------LINRKEFDRLIQRINPDRRKQYYADMTARATRGEAPSSPFSEKNSDALGSLFNSFDRTGKGVVDAMEVAVGLSILCSGSKSSKLASAFELLDENKSGLLSRWRLWKFFRSFLCTLLTLSGAAQELSSDEITRVADGTALFACDSVLTSPTTTEKEDQYAATFDDIADWYTSAGYRIAPWLELLDMTKW 488          
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Match: A0A7S2D6K2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6K2_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.310e-27
Identity = 84/252 (33.33%), Postives = 125/252 (49.60%), Query Frame = 1
Query:  136 DNVAFQFSL--GPAKTAVVLVITEEDVSNVLELAQGTGLANKDPADVAAALLAASENPKAKKGAKAAXXXXXXAAGRRGLLSKNAFDHCIRGLVPGRRLSQGQKERFSGLLSAVFYAFDFDGGAT--VDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSSACQAKAQAKVVEDVDSIAAWTSNLIFQSPALAVQDSLSFDELAAWYTQVGYKVAPWLELLDLNKWAV 879
            D+V F F L    +  A  + I+  D+  +  L   T L N  P    A LL +S +                     G+L K  FD C+R LV    LS+  +  FS +LSA+FY+F+ D G     D  +LA G  +LC+G+KS KL  A++++  + D  L    +  ++RS L +L+  S    +   A+       +AAW +  I +  A A  + + FD+ A WYT  GY+VAPWLELLDL+KW +
Sbjct:  110 DDVRFSFVLVDETSTPAFTVEISGMDMKAIHSLVTKTALVNLAPNSFCAPLLESSMD---------------------GVLDKRFFDKCMRKLVKSTNLSKDDQNAFSVILSAIFYSFEADEGEDEGADCVELAIGMAMLCTGDKSSKLLYAWQVMSGEVDGCLDFASLQSYIRSFLRMLIAISFDASSHRTAETKAYASGMAAWVTESIMRDYADADTEMVVFDDFAQWYTDGGYEVAPWLELLDLSKWVL 340          
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Match: A0A067CBJ2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBJ2_SAPPC)

HSP 1 Score: 118 bits (296), Expect = 9.080e-24
Identity = 69/174 (39.66%), Postives = 95/174 (54.60%), Query Frame = 1
Query:  370 LSKNAFDHCIRGLVP-GRRLSQGQKERFSGLLSAVFYAFDFDGGATVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSSACQAKAQA-KVVEDVD--SIAAWTSNLIFQSPALAVQDSLSFDELAAWYTQVGYKVAPWLELLDLNKWAV 879
            + K  FD C+  L+P  R LS          L+A+F+AF+  G  T+DA +  SGF LLC G+KS KLA  F L DEDGD  LTR  +W+FLRS L++L+   +     A     + D    SIA    N       L ++  ++F E A WY++ GY + PW+ELLD  KW +
Sbjct:  571 IDKGRFDACMAALLPEARDLSP---------LAALFFAFNRTGTGTLDATEFVSGFLLLCGGSKSTKLAFCFGLFDEDGDGFLTRREMWKFLRSFLTMLLALGNGADLSADTIGYICDAACISIAKSIFNESMSGDDLVLRSKVAFAEFADWYSEKGYALIPWIELLDAKKWPI 735          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6418.15092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUX5_ECTSI6.680e-26572.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYX4_9PHAE3.200e-25067.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XMH2_HETAK9.150e-5847.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U1MRH8_9STRA4.590e-4341.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CCD1_9STRA2.450e-3936.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0GD91_9STRA9.090e-3736.12Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A7S3Y3W7_HETAK4.970e-3346.75Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812UYR4_SYMMI7.050e-3032.71Calmodulin (Fragment) n=1 Tax=Symbiodinium microad... [more]
A0A7S2D6K2_9STRA1.310e-2733.33Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A067CBJ2_SAPPC9.080e-2439.66Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6418contigL-elsbetiae_contig6418:1158..10043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score781.6
Seed ortholog evalue3e-223
Seed eggNOG ortholog2880.D7FUX5
Hectar predicted targeting categoryother localisation
EggNOG OGs2CU92@1,2RK0N@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons12
Model size1968
Cds size1968
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6418.15092.1prot_L-elsbetiae_contig6418.15092.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6418 1158..10043 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816709.0275502-CDS-L-elsbetiae_contig6418:1157..13581622816709.0275502-CDS-L-elsbetiae_contig6418:1157..1358Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 1158..1358 -
1691683756.1803365-CDS-L-elsbetiae_contig6418:1157..13581691683756.1803365-CDS-L-elsbetiae_contig6418:1157..1358Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 1158..1358 -
1622816709.038776-CDS-L-elsbetiae_contig6418:1972..20871622816709.038776-CDS-L-elsbetiae_contig6418:1972..2087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 1973..2087 -
1691683756.1929612-CDS-L-elsbetiae_contig6418:1972..20871691683756.1929612-CDS-L-elsbetiae_contig6418:1972..2087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 1973..2087 -
1622816709.0496008-CDS-L-elsbetiae_contig6418:2860..29731622816709.0496008-CDS-L-elsbetiae_contig6418:2860..2973Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 2861..2973 -
1691683756.2072484-CDS-L-elsbetiae_contig6418:2860..29731691683756.2072484-CDS-L-elsbetiae_contig6418:2860..2973Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 2861..2973 -
1622816709.059865-CDS-L-elsbetiae_contig6418:3882..39991622816709.059865-CDS-L-elsbetiae_contig6418:3882..3999Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 3883..3999 -
1691683756.217685-CDS-L-elsbetiae_contig6418:3882..39991691683756.217685-CDS-L-elsbetiae_contig6418:3882..3999Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 3883..3999 -
1622816709.0719898-CDS-L-elsbetiae_contig6418:5207..57181622816709.0719898-CDS-L-elsbetiae_contig6418:5207..5718Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 5208..5718 -
1691683756.2259994-CDS-L-elsbetiae_contig6418:5207..57181691683756.2259994-CDS-L-elsbetiae_contig6418:5207..5718Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 5208..5718 -
1622816709.0839684-CDS-L-elsbetiae_contig6418:6452..66041622816709.0839684-CDS-L-elsbetiae_contig6418:6452..6604Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 6453..6604 -
1691683756.2346714-CDS-L-elsbetiae_contig6418:6452..66041691683756.2346714-CDS-L-elsbetiae_contig6418:6452..6604Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 6453..6604 -
1622816709.0946636-CDS-L-elsbetiae_contig6418:7175..72901622816709.0946636-CDS-L-elsbetiae_contig6418:7175..7290Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 7176..7290 -
1691683756.2432113-CDS-L-elsbetiae_contig6418:7175..72901691683756.2432113-CDS-L-elsbetiae_contig6418:7175..7290Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 7176..7290 -
1622816709.1049154-CDS-L-elsbetiae_contig6418:7522..76691622816709.1049154-CDS-L-elsbetiae_contig6418:7522..7669Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 7523..7669 -
1691683756.2519848-CDS-L-elsbetiae_contig6418:7522..76691691683756.2519848-CDS-L-elsbetiae_contig6418:7522..7669Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 7523..7669 -
1622816709.1150458-CDS-L-elsbetiae_contig6418:8267..84071622816709.1150458-CDS-L-elsbetiae_contig6418:8267..8407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 8268..8407 -
1691683756.2663834-CDS-L-elsbetiae_contig6418:8267..84071691683756.2663834-CDS-L-elsbetiae_contig6418:8267..8407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 8268..8407 -
1622816709.1257088-CDS-L-elsbetiae_contig6418:8455..86081622816709.1257088-CDS-L-elsbetiae_contig6418:8455..8608Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 8456..8608 -
1691683756.2762635-CDS-L-elsbetiae_contig6418:8455..86081691683756.2762635-CDS-L-elsbetiae_contig6418:8455..8608Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 8456..8608 -
1622816709.1365304-CDS-L-elsbetiae_contig6418:9218..93321622816709.1365304-CDS-L-elsbetiae_contig6418:9218..9332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 9219..9332 -
1691683756.2885687-CDS-L-elsbetiae_contig6418:9218..93321691683756.2885687-CDS-L-elsbetiae_contig6418:9218..9332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 9219..9332 -
1622816709.1470087-CDS-L-elsbetiae_contig6418:9953..100431622816709.1470087-CDS-L-elsbetiae_contig6418:9953..10043Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 9954..10043 -
1691683756.3000908-CDS-L-elsbetiae_contig6418:9953..100431691683756.3000908-CDS-L-elsbetiae_contig6418:9953..10043Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6418 9954..10043 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6418.15092.1

>prot_L-elsbetiae_contig6418.15092.1 ID=prot_L-elsbetiae_contig6418.15092.1|Name=mRNA_L-elsbetiae_contig6418.15092.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=656bp
AATTGLEGPSAPALDGSSEDEAEASSRAATGAEGGDAQGWGGAVEDNVAF
QFSLGPAKTAVVLVITEEDVSNVLELAQGTGLANKDPADVAAALLAASEN
PKAKKGAKAAVAAAVAAAGRRGLLSKNAFDHCIRGLVPGRRLSQGQKERF
SGLLSAVFYAFDFDGGATVDARDLASGFFLLCSGNKSVKLASAFRLLDED
GDDQLTREGVWRFLRSLLSILMGFSSACQAKAQAKVVEDVDSIAAWTSNL
IFQSPALAVQDSLSFDELAAWYTQVGYKVAPWLELLDLNKWAVGAAASSA
ANGNSSKGPQMRAHSKAKPMVPPGKPLIAEPKPPGLPTSRDRANGNGVTR
AGAAGAPGALAAYAVKKKGSSGNGERSVAAAEEVVAGGADGVAAQAEGGD
GARGGTGGGGNSGAGAAGVNGDGPAGAAVGGQVLDGDGDNTASLSQVLFT
FPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDKSTPGPRG
KEVSKASFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRAQEGKVLL
RDLACGLSFLCCGSKSSKLAFAYSLFGGGGRVPSGGGQKGHRAIKDGKGA
SAEGGGGGGGGGGGVRGGEDDDDEVSREAIGAFVSGLLTVLCSCVGQMLE
LTNREV
back to top

mRNA from alignment at L-elsbetiae_contig6418:1158..10043-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6418.15092.1 ID=mRNA_L-elsbetiae_contig6418.15092.1|Name=mRNA_L-elsbetiae_contig6418.15092.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8886bp|location=Sequence derived from alignment at L-elsbetiae_contig6418:1158..10043- (Laminarionema elsbetiae ELsaHSoW15)
GCGGCAACGACCGGTCTCGAAGGACCATCGGCACCGGCGTTGGACGGGAG CAGCGAGGACGAAGCGGAGGCCAGCTCTAGAGCGGCGACGGTAAGCTAGT TGCACAAGTTTTGCAGCTGCTGCCTCTGCCTGGATGTTTGGTTGTTGATG TACAGCGGAATTACTGCGTTGTTTGTGTCTACGGCGCTGTCTGTGAGTGC CGCTTGCAGTCGCTGAGGCGCTGGCCGGTGGTTGTGGTGGTGCTGGTACG GTGGGTGGTCTGACATGAAAAATGTTTTTCTAGGCAGTTTGTTCGTTTTA GCCGTCGGTGATGGTGTTAGTTGGAGGCGTTGTTAGTTTGTTGTTGTTGT GGTCGTCTTAAGCCACAATGATCGACGCGTGCTTGTGTTGTTCGAGAGTG TGATGCACGAGCGTAGTGGCTGTCTCACCGAGGGAGCAACGGAGGCTAGC AGTGCTGTGGTGCTGCTCGCACGCGAACCGTGAACTGCTTGACTGGCTGT TTTTCAATGACGCCGCTCTTCTGCGCCCGCCACGCTCCACGCGTGCGTTT TATTTTGATTTTATTACTCTGGAGTGTGAAATATTATCGCTGCACGTCTC TGTTGTCACAGCAGGTATGCACAAAACACTGAAACCATGTATGTATATAA TGCATTGTACAAAATTGAAAACAACAAGATGAGTGCTCTTGGTGTTGCGT GTGTATGTAAGGGTGCGGAGGGCGGAGACGCACAGGGCTGGGGGGGGGCG GTCGAGGACAACGTGGCGTTTCAGTTCAGCTTGGGGCCGGCCAAGACTGC GGTGGTGCTCGTTATCACCGAAGAGGTATGTGCCAATACCGGGGCGGTAT GTACGTATTGGTGGTAGTGGCAGGCAGCCACAATGCAGAGTGATGCACGG GGGTGTTGTGTCAGTACAGCAGCAGTACTAGAAGTGGCCGTTGGCGTTAA ATACCTGCAGTACGACGATCGTTCCTCCGTTAAATACCAGCAGGACGGCC ATGGTTCGTGGGAAGGCGCAAGGTTTTGCCACCACGTGGCCGGAAGTGTG AGCACAGAGACGTCTCTGCTAGCTAGCGAGTAGATGCGAGGGATACTTAG GTGGCATCGGTGGCATCAGTGCAGTGAGAAAGCTGTGGTGTTCAACGTCG CAGATATGCACGGGGAGCCTCGGTCAAACCAACCAACGGATCGTGGACGC CGCCTTAACAGACAAAACAAAACTACCATGACAACGCCCGAAGTCAACCC AAAATGAATCAAAATCGATCCCGCGTGCGTTTGCCTCGACAACAAATCCA AATCCAAACCAAACCAAACCAAAACAAACCAAAACCAAACCAAAACAAAA CCAAACTATAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAA ACCAAAACCAAAACCAAAACCAAAAATCACAACAGGACGTGTCGAACGTG CTTGAGCTGGCCCAAGGGACCGGACTCGCCAACAAGGATCCCGCAGACGT CGCCGCCGCGCTGCTGGCCGCCTCGGAGAACCCGAAGGCCAAGAAAGGCG CCAAGGCGGCGGTGGCGGCAGCGGTAGCGGCGGCGGGCGTTGGCGGGGCG TCGGCGGCAGCGGCGGCGGCAACGGCGGCGGCGGAGCGGAGGGGGCTGCT GTCGAAGAACGCGTTCGATCACTGCATCCGCGGCCTGGTCCCGGGGCGGC GGCTGAGCCAGGGGCAGAAGGAGAGGTTCTCCGGGTTGCTGTCCGCGGTC TTCTACGCGTTCGACTTTGATGGAGGGTGAGTCGAGAGGTCTGCGTTGTA GAGAGGTTTGGTGGCCGGCTCTGGCTGCCGCTGTGGCCTTCGCAAGTTTT TACTGGAAGAAATCATCTGGGATAAAGTGTGGGGGGTCGGTTTGGAGTGA GGGTTAGGGTTAGGGTTAGGGTTACGGAAGCCCTGTCTATTATTTCCTAT TATAGACAGGAATTATTCGCGAAGGATCCGGCTGTCAGCTCGAGAGCGAG CGAGCGAGGGAGCTCGTCGATTTTTAGGCGTTCGTTGTCGAGGGGTGGGA AAGATCTGTGTGTGTGCGGTGGTCGTGTGTTTCGTGTGTTTCGTGTGTTG CATGTTGAATCTCACAGAGGTCCGCAACTCCGAGTGCTCACGCGCCCTGT GTCTGTGTTCGCTCTCTCTGTCTCTTTCTTGCCTCTCTCTTTTCTCTCTC TCTTCTCTCTCTCTCCCCCCCCCCCCCCCCCTCTCTCTCTCTCTCTTACC TCTCTCTTTTTTCTCTCTTCTGCCTTTCGCCTCTCTCTCTCTGTCTCTAT CTGTGTGTGTGTGTGTGTGTGTTGCACGACCGAAACCAATGCGAACGGAT TCGTGCACGCACGCACGCACGCAGCGCGACGGTCGATGCGAGAGATCTGG CGAGCGGTTTCTTCTTGCTGTGCTCAGGCAACAAGAGCGTTAAGCTGGCC AGCGCCTTCCGTCTCCTGGACGAGGACGGCGACGACCAGCTCACCAGGGA GGGGGTGTGGAGGTTTCTGAGGTGAGGTGGCGGGAGGAAAGAGCGAGGAG GGAGGGAGGGAGGGAAGGATGAGGGGGCCTTGCCTACGAGCAGGCCTCTT CGATCCAATGTCATCTACCGTCTTATTTACCCGCGCACGCACACCTCTTT GTTTGTTGTATGTTTTCCGACGACACTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTGACTGCTGACTGCTGCCGTGAATCTTTCCTTCTTTCGTGGCGT CAGATCTCTCCTTTCGATTCTGATGGGGTTCAGCAGCGCGTGCCAGGCGA AAGCGCAGGCGAAGGTGGTGGAGGATGTAGACTCAATCGCCGCATGGACC AGCAACCTTATATTCCAGGTTTGTGCTTGCATAGAAGTCATCTTGCTTCC ATTCGGCAGAAATTTTGTCTTGAGGCACATACAAGTGTATGTCGATGGAG CATTCGTGTATCCATCGCACGTGACACTTAGTAGACCAATGCTGCTTATT AGAAGTATCAATGTAAGGCTTTACTTTGGAGATTTTTTTTTTGTCGGGCT GTACCTTAATAGGAGTATGTACATATTACAAAGGATCTGGGTGCGTTTGG TTGTGTTACGTACAAGGAAAGTGCGCCGTTAAACGCTTGTTGGCGGCGGC TCAAGTGACTACTTCAACAACCCTTGGGACTTTTTTTTCGAGGAAAAAGG CTGGGCTACGCCCCGCGAAAACCCCCCTCACCGTCACCACGACCCCCCCC CTCATTCTCCCCCACGCTACCTTCCTGTTCCACCGCGTTTGCTCGTTTAT CCCCTGCCGGACATTGCGTTTGCGCCGTCGGGTGGGCACGTCACGCATCC CGTATCTGTGGGTGACACGGCACGGTACGGCACGGTACGGCACGGTACGG CACGGTACGGCACGGTACGGCACGGCTTGTGGTGCCCAGAGCCCTGCCTT GGCGGTTCAAGACTCGCTTTCTTTCGACGAACTGGCGGCGTGGTATACCC AGGTGGGGTACAAGGTAGCTCCGTGGCTGGAGCTGCTGGACCTGAACAAG TGGGCCGTTGGGGCTGCGGCAAGTTCCGCGGCAAACGGCAAGTGCAAATG AAAACGATAAACTGTTGCGGGTGTGGTAGTAGTGGTGGCACTGGTGGTTA TGTGGTGTGGCGTGTGGTGTACTGACCTGACCGTAGGGTTGGAGACTGTC AGGCGTTGTCTTTGCGGGAACGATTCGGCCTCCCTGCCTCCCTCCCCTTC CTCCCCACCGGCTCCGGGTGTTGTGCAAATGTTAGTGTTTGCTCTATTGA ATGTATCGCCCGTCCCTTGCAAAGGGGGTTTCGAAACCACCAGCATCAAC ATGGATGCATACAACATACATACATACAAACATGGATCGATGTGTTGATG CCACTGCTGCTTTTGCTGTCTTCGGGGTGTTTGGCGCGAACGCGACACGC ACGCGCGCTCCTTCACGCGTCAATTTTCTCGCCGCTCTCACCTCGCCTTG CCTTAACACACCTCGCCTTACCTTAACATACCTCGCCTTACCTGAACACA CCTCGCCTTACCTTAACATACCCCACCTTACCTTAACACATCTTTCCTTA CCTGAACACACCTGGCCTTCCCGTGCCCCGTTATAGATGTCCAGAACACG GCCATTGCCAACCGCTCGATAGACCCCCCCTCCCCCCCCCCCATGTGATT TGCAAGCATGCGTACTGCTGTGTGAAGTGTGTGCTCACTGGCGGACAAAC TCGCGCGTCGTATCCCGATCTGTCTTCTTCGATGCCCCTGCCTCTTCTGT TCTCCACAGGGGCCTCCCGAGGCAGCAGCAGCAAAGGGCCCCAGATGCGG GCCCACTCGAAGGCAAAGCCCATGGTGCCGCCGGGCAAGCCTCTCATCGC CGAGCCTAAGCCCCCGGGACTGCCGACATCGCGGGACAGGGCCAACGGTA ACGGGGTGACCAGGGCCGGAGCCGCCGGAGCCCCCGGAGCCCTCGCCGCA TACGCGGTTAAGAAGAAGGGCAGCAGCGGCAACGGCGAGAGAAGCGTGGC GGCGGCGGAGGAGGTCGTTGCCGGCGGAGCGGATGGTGTGGCGGCACAGG CTGAGGGGGGTGACGGTGCTAGGGGGGGCACCGGGGGGGGAGGTAACTCT GGTGCGGGGGCTGCGGGTGTGAACGGGGATGGGCCGGCGGGGGCGGCGGT GGGGGGGCAGGTATTGGATGGTGATGGGGATAACACGGCGAGCCTGAGCC AGGTGTTGTTCACGTTCCCGCTGGTGCCGGACGTGGAGCTCCTGGTTATG CAGGAAGACGTGGACTTTGTCCAGAGAATTGTCGTGGTGAGCAATGATAG GTACCGGCAAGGTCAAGGGAAGAGGCGGGGCATGTGTGTGTATGTGTGTG TGTGTTGTGTGTGCGCGCGCGCGTCAGTATCATCTGCGTATTAGGTTGAG ATTATCTTTCGTCGTCCTCGCTTGTTTACGGTAAATGCAGCAGTCAGTGT TCCCTTCCATCCATCGCTATTTAGCTATACTCTCCATCCTCGACGGCGGG GCCCCCCGATAGGCCGAGGCACGAGGCGGCCCTCGGCTGGTTGGTGTCCA GAGTGTTGGTGTCCAATGGCTTAACTGGCTAGTCTGGTGTGATCATTGAC GACGCCTTTCAGCGTGCTCTGGGCTTGTGGCGCGTGTCGATATAGTCGTG TCGTCTTCTGTGCTGCAAACCGAACCCCCCGAGGGCGCGTGTGGCCGTGC GCGCGTATCGGTTTCGTGGGTGTGCTGAATGTTTTTGCATCATCTTCTGC GCGAAACTAACCGGCTGACTAGCGTATGTTATTGTTGTTGTTGTTGTTGT TGGCTCTCACATTAGCTTGTGTGATCGAAATCGAATCACAAAAACTAGCA AAATTTAGTCGTCGCGTGTGTGTGTGTATGTGTGTACATATTTCGAAGTA TCTGTATCTATGTGTAGATACATATAGATACATGTACAAACTGATATCTG GGAACTTCTGTTCCGAAATCTGAATCAGTAGGCTATCGGCCTCCAATAGC CCAAAAAAACATCAGTATGAAGCAGCTGTTTTGAGCATGGCTGCACATGC CACGAGACTGGACAGCTATTGTACCTAATGAGCGCAGACCGGCACAGCTC TGTTTGGTTCAAGGGAGCGGCAGCACAGAAAATAAGCGTTGTTTGTTTGT TTCAGTATGCACAGCAGCTGCTCTGCTTCGGTGCTGAAAACACAACAGCT GCTGTTTTTTTCAGTTGCAAATTTAGGAGTACTTCTGCTGCCTTCGCCTG TTTGCTTTGGTCTTGCATCACCCCCTGCCGCTGTGCTTTCATGAGCTCGC TCGTCGTACCGGTGTCGTGTTCTTGCTCGCCAGCTTTAACGGCGCTTAAT GCCTAATCTAACCAGCTGGCTAAATAAGTACCGCGCGTTATCCTGTCCCG GTACGTGTGTATATACATTCTCGATGTGTGTGTGTGTGTTTTTTTTCATT GTTCTTCGTCCGTGGTTCTTGGCTGGTTGTCGCTCTCGCCGCAGGGGACG CGCTTGGCCGCGCTGTTACCTCAAGACATCCTCGAGACGTTCCGAGATAA GTCCACGCCCGGGCCGAGGGGCAAGGAGGTCAGCAAGGCGTCCTTCGACA CGGGGATGCAGGTCGGTTGGCCGGTCGTGCTTTGTTTTGCTTTGCTGGTC GCGGTGTCGTTGATCTTGGGCTGCTGGATGGGCCAAAGGGAGAGAGAAAG AGAGAGAGAGGGAGAGAGACAGAGAGAGAGAGGGAGAGAGACAGAGAGAG GGAGACAGAGAGAGAGAGACAGATTTAGCGGCACAGAGAGCCGAACAAAA GTCGGTACTCTTGTTCCGTGTCTCTGGGATGGTCTAATGGTGGGGGTGTA AATAGGGGTAGTGAATATAAGAAGAGGCGTTCCGGTCCTGTAAATGGATT CCTCCGAGACGGCTTTTTTTTCATGCATATGGGCGGTGCCCCTGCTTCTC AATAGCAATGTCGGGGGGCCGTGGGGTGGGTGTGGTGCAAGGCCCAACTA AGTTACCGGCAGCAGTGTCCGACAGAGATGGTGGGATATTCCGATATCCC CTTTCTTTCTTTCTGTCTGTCTGTCTGTCTGTCTCAGTTTTTTTTTGTTT GTTTTGTTTTACCGCTCGCGGGTCTCTGCGGGTTTGTTTGAGACGATCTT TGTGGTTCTGGTGCGTATTGTGGCGTGATGTTTGGGCCGCGTGGCGCTGC AAATATTGTGTTTTTGTCATTTCTTGCGTACTCGCCAGCTGATCAAGAGA CAAGATGCTTCATTTAAACGCCGTTACGCGAAAGGTCGCGACGGGGGGCC GCGTGAGGGAGAATTTATCTTACGTGTGTGTATGGGGGGGGGGGGGGGGT TGATGTGTTCACTCAGCAGAAGCGAGCAAGCCTTGGAGATAACGTTGGAA GGTTTCTGTCCATCGACGTATTGGCGAGTGCACTCATTTAGAAAAATGTT TGTTTATTCATGTTTATTTATGTTTTCATTTTGGCTCTTTGCGGTGTGTC CGTTGTCTTGGCTTTGGCAGGAGCTGGTGCGGCTGCAGAGCATGCTGGAG GACGAGCGTGACCTGCTCTCCTTCGCACTGGCAAATATCTTTTTCGCGTA CGACCGCGCTCAGGAGGGCAAGGTCTTGCTGAGGTGCGTTTGTAATTGAT AAGTTAGTTTGATGAAAGGGTATAAATGTATAAATCACATGTCAACGACG AGAGAGAGACAGATGTAATGACAAGTACATAAACGTGCGTTTGTAATTGA TAGGTCAGTTGGTGTAAAGAACAAATTTCGAATTTGTGTCAACGATGACA GAGGGATCTATTGGGAGATATATAGAAACCTGCAGAGAATGACAAGTATG TAGAGTAGGTTTCAGGACAGGAAGCAAAGCCGCAGTGGCACTGCAGTAGC CGGGGGGGGGGGGTAAATGGCTTCATCGCTGGGCGTGCTGATTGTGCGGG GCCCCTACAACATATTTCGAGTTTGTGTGGCTTGCGGAGAGAGGAGGGGT GGGCACTTGTGAGGCGCGGACGTGAGTGTGTCGGTGCTCCCCCGACCCTA TTGTAATAAGTCTCTAACGTCAGTTCAGGGGTCAAGGCGTGCTGGACGGA ATTCTCCTCCGTCAGAGATTGTGGAGATGATATTTGCTGTGTGTGTATGT AGTATTACTGTTCCCAAATATGCGAAGAAGGTTTTCCACCCCCTGTGTGT GTATGTAGTGTGACTCTGGGCGGTTGCCGCTGATTCTGGATTCGTGTGAC TGCTGCGCATGGCATGGCATGGCTGGACAAAATTATATTCCAGAAGCTGC CCTCCCTTTTCCGCGCTCCTAAACCTATGCACATGTGTACGCGCATCCCG CCCCTTGCCCTCCCCCCCCGACGAACACGCGAATCGGCGGTGCCCCGCCG CAACAGAGATCTGGCGTGCGGGCTGTCGTTCCTCTGCTGCGGATCGAAGT CATCCAAGCTTGCCTTCGCCTACTCTCTTTTCGGGGGCGGAGGGAGGGTT CCGTCGGGGGGGGGACAGAAAGTCCACCCAGTCTCCCTTCCCCCCCGTTT GGCGGGGGGGGTGGGGGTATTTTTTTTTTTTTTTTTTTTGTGGTGCGGTT CGTCGGGGGAGCGACAGAGTGAAAGTGACAAGATGTATGGTATGGGTATT CATTCAGACACTTGGTGCGGATAAGTCTCGTTCTCGTGGGAGTTAGTTGT CGAGTGGTTCAAGGAGCCAAGGAGCCAAGTCGAGAGTCCGCCCCGTGGTG GAGGGGGGATTAAGAGCTCACCGTCCTTTCGGTGGCTGGTCGACAGCGGT GCTGTTTGTGTCTTGGGGGGGGGGGCATCTTCGCGCGAAGGGAACGACAA GACGCCTTACCACTCTGAGGTTGCTCTACCTGCTCGTTTTTTCTTGATTT CTGCCCTTCTCGTCTTCCTGAGCGGGGGTTGATTTTTATGTCTACCGGTA CTTTGGGTCGTGAGTCTCGCGATCTGACGGTGAATGGTGGTGGTGGTGAC GGTCATGATTGCGTGGCGGGCCATAGAACTTGCATACCCTCATATGCATG TACCCCGCTTCTCGAGCCTCCTGCCTAAAACGACACGTACATACCGCCGC GCCAGGTGGTAGGGGCTGATCAAAGGCAGCCGCAGGGGCACCGTGCGATC AAAGACGGAAAGGGGGCGTCCGCGGAAGGCGGGGGGGGGGGGGGGGGGGG CGGCGGCGGCGTGCGTGGCGGGGAGGACGACGACGACGAGGTCTCTAGAG AGGCGATAGGGGCCTTCGTGTCGGGGCTGCTCACCGTCTTGTGCTCGTGC GTGGGGCAGATGTTGGAGCTGACGAACCGTGAGGTG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6418:1158..10043-

>mRNA_L-elsbetiae_contig6418.15092.1 ID=mRNA_L-elsbetiae_contig6418.15092.1|Name=mRNA_L-elsbetiae_contig6418.15092.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3936bp|location=Sequence derived from alignment at L-elsbetiae_contig6418:1158..10043- (Laminarionema elsbetiae ELsaHSoW15)
GCGGCAACGACCGGTCTCGAAGGACCATCGGCACCGGCGTTGGACGGGAG
CAGCGAGGACGAAGCGGAGGCCAGCTCTAGAGCGGCGACGGCGGCAACGA
CCGGTCTCGAAGGACCATCGGCACCGGCGTTGGACGGGAGCAGCGAGGAC
GAAGCGGAGGCCAGCTCTAGAGCGGCGACGGGTGCGGAGGGCGGAGACGC
ACAGGGCTGGGGGGGGGCGGTCGAGGACAACGTGGCGTTTCAGTTCAGCT
TGGGGCCGGCCAAGACTGCGGTGGTGCTCGTTATCACCGAAGAGGGTGCG
GAGGGCGGAGACGCACAGGGCTGGGGGGGGGCGGTCGAGGACAACGTGGC
GTTTCAGTTCAGCTTGGGGCCGGCCAAGACTGCGGTGGTGCTCGTTATCA
CCGAAGAGGACGTGTCGAACGTGCTTGAGCTGGCCCAAGGGACCGGACTC
GCCAACAAGGATCCCGCAGACGTCGCCGCCGCGCTGCTGGCCGCCTCGGA
GAACCCGAAGGCCAAGAAAGGCGCCAAGGCGGCGGTGGCGGCAGCGGTAG
CGGCGGCGGGCGACGTGTCGAACGTGCTTGAGCTGGCCCAAGGGACCGGA
CTCGCCAACAAGGATCCCGCAGACGTCGCCGCCGCGCTGCTGGCCGCCTC
GGAGAACCCGAAGGCCAAGAAAGGCGCCAAGGCGGCGGTGGCGGCAGCGG
TAGCGGCGGCGGGCCGGAGGGGGCTGCTGTCGAAGAACGCGTTCGATCAC
TGCATCCGCGGCCTGGTCCCGGGGCGGCGGCTGAGCCAGGGGCAGAAGGA
GAGGTTCTCCGGGTTGCTGTCCGCGGTCTTCTACGCGTTCGACTTTGATG
GAGGCGGAGGGGGCTGCTGTCGAAGAACGCGTTCGATCACTGCATCCGCG
GCCTGGTCCCGGGGCGGCGGCTGAGCCAGGGGCAGAAGGAGAGGTTCTCC
GGGTTGCTGTCCGCGGTCTTCTACGCGTTCGACTTTGATGGAGGCGCGAC
GGTCGATGCGAGAGATCTGGCGAGCGGTTTCTTCTTGCTGTGCTCAGGCA
ACAAGAGCGTTAAGCTGGCCAGCGCCTTCCGTCTCCTGGACGAGGACGGC
GACGACCAGCTCACCAGGGAGGGGGTGTGGAGGTTTCTGAGCGCGACGGT
CGATGCGAGAGATCTGGCGAGCGGTTTCTTCTTGCTGTGCTCAGGCAACA
AGAGCGTTAAGCTGGCCAGCGCCTTCCGTCTCCTGGACGAGGACGGCGAC
GACCAGCTCACCAGGGAGGGGGTGTGGAGGTTTCTGAGATCTCTCCTTTC
GATTCTGATGGGGTTCAGCAGCGCGTGCCAGGCGAAAGCGCAGGCGAAGG
TGGTGGAGGATGTAGACTCAATCGCCGCATGGACCAGCAACCTTATATTC
CAGATCTCTCCTTTCGATTCTGATGGGGTTCAGCAGCGCGTGCCAGGCGA
AAGCGCAGGCGAAGGTGGTGGAGGATGTAGACTCAATCGCCGCATGGACC
AGCAACCTTATATTCCAGAGCCCTGCCTTGGCGGTTCAAGACTCGCTTTC
TTTCGACGAACTGGCGGCGTGGTATACCCAGGTGGGGTACAAGGTAGCTC
CGTGGCTGGAGCTGCTGGACCTGAACAAGTGGGCCGTTGGGGCTGCGGCA
AGTTCCGCGGCAAACGGCAAAGCCCTGCCTTGGCGGTTCAAGACTCGCTT
TCTTTCGACGAACTGGCGGCGTGGTATACCCAGGTGGGGTACAAGGTAGC
TCCGTGGCTGGAGCTGCTGGACCTGAACAAGTGGGCCGTTGGGGCTGCGG
CAAGTTCCGCGGCAAACGGCAACAGCAGCAAAGGGCCCCAGATGCGGGCC
CACTCGAAGGCAAAGCCCATGGTGCCGCCGGGCAAGCCTCTCATCGCCGA
GCCTAAGCCCCCGGGACTGCCGACATCGCGGGACAGGGCCAACGGTAACG
GGGTGACCAGGGCCGGAGCCGCCGGAGCCCCCGGAGCCCTCGCCGCATAC
GCGGTTAAGAAGAAGGGCAGCAGCGGCAACGGCGAGAGAAGCGTGGCGGC
GGCGGAGGAGGTCGTTGCCGGCGGAGCGGATGGTGTGGCGGCACAGGCTG
AGGGGGGTGACGGTGCTAGGGGGGGCACCGGGGGGGGAGGTAACTCTGGT
GCGGGGGCTGCGGGTGTGAACGGGGATGGGCCGGCGGGGGCGGCGGTGGG
GGGGCAGGTATTGGATGGTGATGGGGATAACACGGCGAGCCTGAGCCAGG
TGTTGTTCACGTTCCCGCTGGTGCCGGACGTGGAGCTCCTGGTTATGCAG
GAAGACGTGGACTTTGTCCAGAGAATTGTCGTGCAGCAGCAAAGGGCCCC
AGATGCGGGCCCACTCGAAGGCAAAGCCCATGGTGCCGCCGGGCAAGCCT
CTCATCGCCGAGCCTAAGCCCCCGGGACTGCCGACATCGCGGGACAGGGC
CAACGGTAACGGGGTGACCAGGGCCGGAGCCGCCGGAGCCCCCGGAGCCC
TCGCCGCATACGCGGTTAAGAAGAAGGGCAGCAGCGGCAACGGCGAGAGA
AGCGTGGCGGCGGCGGAGGAGGTCGTTGCCGGCGGAGCGGATGGTGTGGC
GGCACAGGCTGAGGGGGGTGACGGTGCTAGGGGGGGCACCGGGGGGGGAG
GTAACTCTGGTGCGGGGGCTGCGGGTGTGAACGGGGATGGGCCGGCGGGG
GCGGCGGTGGGGGGGCAGGTATTGGATGGTGATGGGGATAACACGGCGAG
CCTGAGCCAGGTGTTGTTCACGTTCCCGCTGGTGCCGGACGTGGAGCTCC
TGGTTATGCAGGAAGACGTGGACTTTGTCCAGAGAATTGTCGTGGGGACG
CGCTTGGCCGCGCTGTTACCTCAAGACATCCTCGAGACGTTCCGAGATAA
GTCCACGCCCGGGCCGAGGGGCAAGGAGGTCAGCAAGGCGTCCTTCGACA
CGGGGATGCAGGGGACGCGCTTGGCCGCGCTGTTACCTCAAGACATCCTC
GAGACGTTCCGAGATAAGTCCACGCCCGGGCCGAGGGGCAAGGAGGTCAG
CAAGGCGTCCTTCGACACGGGGATGCAGGAGCTGGTGCGGCTGCAGAGCA
TGCTGGAGGACGAGCGTGACCTGCTCTCCTTCGCACTGGCAAATATCTTT
TTCGCGTACGACCGCGCTCAGGAGGGCAAGGTCTTGCTGAGGAGCTGGTG
CGGCTGCAGAGCATGCTGGAGGACGAGCGTGACCTGCTCTCCTTCGCACT
GGCAAATATCTTTTTCGCGTACGACCGCGCTCAGGAGGGCAAGGTCTTGC
TGAGAGATCTGGCGTGCGGGCTGTCGTTCCTCTGCTGCGGATCGAAGTCA
TCCAAGCTTGCCTTCGCCTACTCTCTTTTCGGGGGCGGAGGGAGGGTTCC
GTCGGGGGGGGGACAGAAAAGATCTGGCGTGCGGGCTGTCGTTCCTCTGC
TGCGGATCGAAGTCATCCAAGCTTGCCTTCGCCTACTCTCTTTTCGGGGG
CGGAGGGAGGGTTCCGTCGGGGGGGGGACAGAAAGGGCACCGTGCGATCA
AAGACGGAAAGGGGGCGTCCGCGGAAGGCGGGGGGGGGGGGGGGGGGGGC
GGCGGCGGCGTGCGTGGCGGGGAGGACGACGACGACGAGGTCTCTAGAGA
GGCGATAGGGGCCTTCGTGTCGGGGCTGCTCACCGTCTTGTGCTCGTGCG
TGGGGCAGATGTTGGAGCTGACGAACCGTGAGGTGGGGCACCGTGCGATC
AAAGACGGAAAGGGGGCGTCCGCGGAAGGCGGGGGGGGGGGGGGGGGGGG
CGGCGGCGGCGTGCGTGGCGGGGAGGACGACGACGACGAGGTCTCTAGAG
AGGCGATAGGGGCCTTCGTGTCGGGGCTGCTCACCGTCTTGTGCTCGTGC
GTGGGGCAGATGTTGGAGCTGACGAACCGTGAGGTG
back to top