mRNA_L-elsbetiae_contig641.15085.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Match: D7G287_ECTSI (Putative serine esterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G287_ECTSI) HSP 1 Score: 443 bits (1139), Expect = 1.700e-144 Identity = 270/426 (63.38%), Postives = 299/426 (70.19%), Query Frame = 1 Query: 346 PSHLVVLSHGLAGSADDLSYLKQSLERAGGPGVLVHSARCNQGKTKDGVAEGGGRLAKEILELVGSEPSLSRISLVGNSLGGLYVRYAAKLLYSNSDAGSPVG-GATIAGLKPSVFMTIACPHLGVRRFTYVPLPSMLHPLAGVFVGKTGADLIGDDSGDGTXXXXXXXXXXXRARKGAGSAQDGRESILLYGMSTSEEFLRPLKAFRWRRAYANRRGDFMVPYGTAAFLEPGEGDGSEEPVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSAPVGLVGTGSFTLADRLLGAKSGAIVGVTRVGPAAPGAAAVGSGGQGEEPPQDDGGTGTSARIGGSAAVKGAAERREDKDRKSMEEEMAAGLNSCGWEKVSVDFGSLAPLSHNKICALSRTRITTALYGCGRSVVDHAADFLVARDIE 1620 P+HLVVL+HGL+G+ +DL+YLKQSLER GG +LVHSAR N+GKTKDGV EGG RLA+EILE+V S PSLSRISLVGNSLGGLYVRYAAKLLY + G G GAT+AGL PSVFMTIA PHLGVRRFTYVPLPS LH LAGVFVGKTG DL G XXXXXXXXXXX A+DGRE+ LLY M+T+++FLRPLKAFRWRRAYANRRGDFMVPYGTAAF+EP EGDGS+ G X +A GT SFT ADRLLGAK+ AIVGV+RV A G T + + +G A GAA++ E RKSMEEEMAAGLNSCGWEKVSVDFG +AP SHNKICALSRT ITTALYG GRSVVDHAA FLV RD E Sbjct: 63 PAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEILEVVQSTPSLSRISLVGNSLGGLYVRYAAKLLYRDETTGGDGGTGATVAGLSPSVFMTIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKKGGXXXXXXXXXXXXXXXXXXXXAKDGRENSLLYNMATTKDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDGAKTGEEEEXEQDVSESDAVVSRGVSSPPDGAAAALADGTESFTFADRLLGAKNAAIVGVSRVSAA------------GXXXXXXXXRTDSDSGVGDRA---GAAKKEEALTRKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLVKRDRE 473
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Match: A0A6H5LMX6_9PHAE (DUF676 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMX6_9PHAE) HSP 1 Score: 437 bits (1125), Expect = 3.830e-142 Identity = 272/426 (63.85%), Postives = 300/426 (70.42%), Query Frame = 1 Query: 346 PSHLVVLSHGLAGSADDLSYLKQSLERAGGPGVLVHSARCNQGKTKDGVAEGGGRLAKEILELVGSEPSLSRISLVGNSLGGLYVRYAAKLLYSNSDAGSPVG-GATIAGLKPSVFMTIACPHLGVRRFTYVPLPSMLHPLAGVFVGKTGADLIGDDSGDGTXXXXXXXXXXXRARKGAGSAQDGRESILLYGMSTSEEFLRPLKAFRWRRAYANRRGDFMVPYGTAAFLEPGEGDGSEEPVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSAPVGLVGTGSFTLADRLLGAKSGAIVGVTRVGPAAPGAAAVGSGGQGEEPPQDDGGTGTSARIGGSAAVKGAAERREDKDRKSMEEEMAAGLNSCGWEKVSVDFGSLAPLSHNKICALSRTRITTALYGCGRSVVDHAADFLVARDIE 1620 P+HLVVL+HGL+G+ +DL+YLKQSLER GG +LVHSAR N+GKTKDGV EGG RLA+EI E+V S PSLSRISLVGNSLGGLY RYAAKLLY + G G GAT+AGL PSVFMTIA PHLGVRRFTYVPLPS LH LAGVFVGKTG DL G XXXXXXXXXXX +A+DGRE+ LLY M+T+E+FLRPLKAFRWRRAYANRRGDFMVPYGTAAF+EP EGDGS+ G G +A + GT SFT ADR LGAK+ AIVGV+RV PAA GAA + D +G R GG A + E RKSMEEEMAAGLNSCGWEKVSVDFG +AP SHNKICALSRT ITTALYG GRSVVDHAA FLV RD E Sbjct: 95 PAHLVVLAHGLSGTPEDLTYLKQSLEREGGSEILVHSARRNEGKTKDGVVEGGSRLAEEIREVVQSTPSLSRISLVGNSLGGLYARYAAKLLYRDETTGGDSGTGATVAGLSPSVFMTIATPHLGVRRFTYVPLPSPLHSLAGVFVGKTGHDLFLSRKKVGXXXXXXXXXXXXXXXXXX-AAKDGRENSLLYNMATTEDFLRPLKAFRWRRAYANRRGDFMVPYGTAAFVEPDEGDGSDASPSGRDDAKTGEEEQEQDVSESDAVVSRGVSSPPDGAAASLA-AGTESFTFADRWLGAKNAAIVGVSRV-PAA-GAAXX-------XXXRSDTDSGMGDRAGG-------ANKEEAHARKSMEEEMAAGLNSCGWEKVSVDFGGVAPFSHNKICALSRTAITTALYGSGRSVVDHAAAFLVKRDRE 502
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Match: L1J7J1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J7J1_GUITC) HSP 1 Score: 212 bits (539), Expect = 1.730e-54 Identity = 121/234 (51.71%), Postives = 147/234 (62.82%), Query Frame = 1 Query: 337 STSPSHLVVLSHGLAGSADDLSYLKQSLERAGGP--GVLVHSARCNQGKTKDGVAEGGGRLAKEILELVGSEPSLSRISLVGNSLGGLYVRYAAKLLYSNSDAGSPVGGATIAGLKPSVFMTIACPHLGVRRFTYVPLPSMLHPLAGVFVGKTGADLIGDDSGDGTXXXXXXXXXXXRARKGAGSAQDGRESILLYGMSTSEEFLRPLKAFRWRRAYANRRGDFMVPYGTAAFL 1032 S+ P HL+VL HGLAG+ADDL+YLK+S++ G LV+ A+CN+ KT+DGV GG RLAKEI+ELV PSL RIS VGNSLGGLY RYA +L+ G + GLKP F+T A PHLGVRRFTY+P+P LH LA VFVG+TG DL ++G E LL MST E FLR L++F RRAYAN GDF+VP+GTAAF+ Sbjct: 154 SSGPEHLIVLVHGLAGTADDLAYLKRSVDSQDGTLKNTLVYLAKCNEDKTRDGVEAGGWRLAKEIVELVEEVPSLQRISFVGNSLGGLYSRYAIAVLHREGGGGRQEEDL-VCGLKPDTFVTTATPHLGVRRFTYLPIPDQLHGLAPVFVGRTGDDLFM-------------------------LGKEGDEPPLLLLMSTCEVFLRGLRSFSRRRAYANLEGDFLVPFGTAAFM 361
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Match: A0A7S1HTD2_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HTD2_9EUGL) HSP 1 Score: 184 bits (466), Expect = 1.570e-49 Identity = 117/237 (49.37%), Postives = 137/237 (57.81%), Query Frame = 1 Query: 379 AGSADDLSYLKQSLERAGGPGVLVHSARCNQGKTKDGVAEGGGRLAKEILELVGSEPSLSRISLVGNSLGGLYVRYAAKLLYSNSDAGSPVGGATIAGLKPSVFMTIACPHLGVRRFTYVPLPSMLHPLAGVFVGKTGADLIGDDSGDGTXXXXXXXXXXXRARKGAGSAQDGRESILLYGMSTSEEFLRPLKAFRWRRAYANRRGDFMVPYGTAAFL-----EPGEGDGSEEPVGG 1074 +G+A DL +L +E A PG LV +AR N+G+TKDGVA GG RLA EI E + PSL +ISLVGNSLGGLYVRY AKLLY + TIAGL+P MT+ACPHLG+R FT+VP+PS L PLA V VG+TG DL +D R LL M+T E+L PL AFR R +AN GDFMVPYGTAA PG DG GG Sbjct: 1 SGTAHDLHFLAGRIE-AESPGALVLAARSNEGRTKDGVAAGGERLAAEIRECIRQYPSLQQISLVGNSLGGLYVRYTAKLLYDPTSR-------TIAGLQPRTLMTLACPHLGIRGFTFVPVPSPLQPLARVLVGQTGDDLF---------------------------LRDRRR--LLATMATDREYLEPLAAFRNRILFANVEGDFMVPYGTAAIDASREGRPGAWDGVSRGRGG 200
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Match: R1BBJ2_EMIHU (DUF676 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BBJ2_EMIHU) HSP 1 Score: 182 bits (463), Expect = 1.220e-47 Identity = 111/243 (45.68%), Postives = 136/243 (55.97%), Query Frame = 1 Query: 337 STSPSHLVVLSHGLAGSADDLSYLKQSLERAGGPGVLVHSARCNQGKTKDGVAEGGGRLAKEILELVGSEPSLSRISLVGNSLGGLYVRYAAKLLYSNSDAGSPVGGATIAGLKPSVFMTIACPHLGVRRFTYVPLPSMLHPLAGVFVGKTGADLIGDDSGDGTXXXXXXXXXXXRARKGAGSAQDGRESILLYGMSTSEEFLRPLKAFRWRRAYANRRGDFMVPYGTAAF----LEPGEGDG 1053 + SP HLVVL HGL G A +L+ L+Q L GG VLVH A N+G T+DGVA GG RLA EI + S PSL +SLVGNSLGGLYVR AA LY GG GL P+ +T CPHLGVRR+TY+PLP LH L G+ G+T +DL+ R+ + D R +L+ + L++F+ RR YAN RGDFMVP+GTAA G GDG Sbjct: 9 AASPDHLVVLQHGLYGGASNLAVLRQCLVGIGGDNVLVHLASANEGMTRDGVAAGGRRLAAEIRSVAASAPSLESLSLVGNSLGGLYVRAAAAELYG--------GGQQELGLAPNTLVTTGCPHLGVRRYTYLPLPPALHSLGGLVAGRTASDLL--------------------LRR---TDADPRRPLLVEMADPDSRYGVALRSFQRRRLYANLRGDFMVPFGTAAIETGGWAAGVGDG 220
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Match: A0A7S4G3V3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G3V3_9EUGL) HSP 1 Score: 174 bits (441), Expect = 5.790e-45 Identity = 108/232 (46.55%), Postives = 138/232 (59.48%), Query Frame = 1 Query: 337 STSPSHLVVLSHGLAGSADDLSYLKQSLERAGGPGVLVHSARCNQGKTKDGVAEGGGRLAKEILELVGSEPSLSRISLVGNSLGGLYVRYAAKLLYSNSDAGSPVGGATIAGLKPSVFMTIACPHLGVRRFTYVPLPSMLHPLAGVFVGKTGADLIGDDSGDGTXXXXXXXXXXXRARKGAGSAQDGRESI--LLYGMSTSEEFLRPLKAFRWRRAYANRRGDFMVPYGTAA 1026 S+ +HL+VLSHGL G+ +L+ L++ L + P + V +A NQG T DGVA GG RLAKEI VG PSL ISLVG SLGGLYVRYAA+LLY+ TIAGL+P +T+A PHLGVR+FT++P+P +HPL + + +TG+DL +DGR LL M+T EFL PL AF+ R A+AN GD +VPYGTAA Sbjct: 9 SSRTTHLMVLSHGLTGAPHNLAVLQRELLQRS-PCLQVLNAASNQGHTLDGVAAGGERLAKEIEACVGRHPSLVHISLVGYSLGGLYVRYAARLLYNPKTN-------TIAGLQPRTLLTLASPHLGVRKFTWLPIPRPIHPLIPLLLRQTGSDLF---------------------------LRDGRRRTAPLLLRMATLPEFLEPLAAFQQRVAFANLAGDLLVPYGTAA 205
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Match: A0A813D472_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D472_POLGL) HSP 1 Score: 171 bits (434), Expect = 1.080e-44 Identity = 109/242 (45.04%), Postives = 140/242 (57.85%), Query Frame = 1 Query: 343 SPSHLVVLSHGLAGSADDLSYLKQSLERAGGPGVLVHSARCNQGKTKDGVAEGGGRLAKEILELVGSEPSLSRISLVGNSLGGLYVRYAAKLLYSNSDAGSPVGGATIAGLKPSVFMTIACPHLGVRRFTYVPLPSMLHPLAGVFVGKTGADLIGDDSGDGTXXXXXXXXXXXRARKGAGSAQDGRESILLYGMSTSEEFLRPLKAFRWRRAYANRRGDFM----VPYGTAAFLEPGEGDGS 1056 SP+HLVVL HGL+G+ DL+ L L++A P VLVHSA N G+T DGVA GG RLA+EI + P++ +SLVGNSLGGLY R+AA L++ S G T+AGL+P+ F++I CPHLG+RRFT++P+P +LH + VG+TG DL G E +L F R L+AFR R YAN GDFM VP+GTAA LEP G G+ Sbjct: 35 SPTHLVVLQHGLSGTVADLNRLGAELQQAC-PDVLVHSATSNFGRTTDGVAAGGLRLAEEIRAVAAQHPTVCELSLVGNSLGGLYARFAAGELWAASG-----DGETLAGLRPATFVSIGCPHLGIRRFTFLPVPDVLHGASRAVVGRTGEDLF----------------------------LLGSEPLLPKMAEPGGRFDRGLRAFRRRGLYANLWGDFMAPWAVPFGTAA-LEPEWGPGA 241
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Match: A0A4D9CXB7_9STRA (DUF676 domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXB7_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.430e-44 Identity = 103/228 (45.18%), Postives = 129/228 (56.58%), Query Frame = 1 Query: 346 PSHLVVLSHGLAGSADDLSYLKQSLERAGGPGVLVHSARCNQGKTKDGVAEGGGRLAKEILELVGSEPSLSRISLVGNSLGGLYVRYAAKLLYSNSDAGSPVGGATIAGLKPSVFMTIACPHLGVRRFTYVPLPSMLHPLAGVFVGKTGADLIGDDSGDGTXXXXXXXXXXXRARKGAGSAQDGRESILLYGMSTSEEFLRPLKAFRWRRAYANRRGDFMVPYGTAAF 1029 P+HL V+ HGL G DL+YL ++ G +L H A CN KT DGV +GG RLA EI E+V + PSL IS +GNSLGG+Y RYA LL+ T+ GLKP FM+IA PHLGVRRFT VP+P ++H +F+G+TG DLI G+G E+ LL M+ S +FL PL AFR R AY N + D +VP GTA F Sbjct: 27 PTHLAVVVHGLHGRPADLTYLGNAIGSRGQGRILPHLAHCNLHKTMDGVVKGGERLAAEIKEVVAAHPSLRAISFIGNSLGGVYSRYALSLLWEPRTR-------TVLGLKPITFMSIATPHLGVRRFTVVPVPDLVHVATPLFIGQTGNDLILRSRGEG-------------------------ETPLLLEMAQSTKFLEPLAAFRHRCAYGNVKEDLLVPIGTALF 222
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Match: A0A813G1M4_POLGL (Hypothetical protein (Fragment) n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G1M4_POLGL) HSP 1 Score: 172 bits (436), Expect = 7.040e-44 Identity = 109/243 (44.86%), Postives = 141/243 (58.02%), Query Frame = 1 Query: 343 SPSHLVVLSHGLAGSADDLSYLKQSLERAGGPGVLVHSARCNQGKTKDGVAEGGGRLAKEILELVGSEPSLSRISLVGNSLGGLYVRYAAKLLYSNSDAGSPVGGATIAGLKPSVFMTIACPHLGVRRFTYVPLPSMLHPLAGVFVGKTGADLIGDDSGDGTXXXXXXXXXXXRARKGAGSAQDGRESILLYGMSTSEEFLRPLKAFRWRRAYANRRGDFM---VPYGTAAFLEPGEGDGSEE 1062 SP+HLVVL HGL+G+ DL+ L L++A P VLVHSA N G+T DGVA GG RLA+EI + P++ +SLVGNSLGGLY R+AA L++ S G T+AGL+P+ F++I CPHLG+RRFT++P+P +LH + VG+TG DL G E +L F R L+AFR R YAN GDFM VP+GTAA LEP G G+ + Sbjct: 35 SPTHLVVLQHGLSGTVADLNRLGAELQQAC-PDVLVHSATSNFGRTTDGVAAGGLRLAEEIRAVAAQHPTVCELSLVGNSLGGLYARFAAGELWAASG-----DGETLAGLRPATFVSIGCPHLGIRRFTFLPVPDVLHGASRAVVGRTGEDLF----------------------------LLGSEPLLPKMAEPGGRFDRGLRAFRRRGLYANLWGDFMAPWVPFGTAA-LEPEWGPGAAD 242
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Match: A0A7S2SR01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR01_9STRA) HSP 1 Score: 167 bits (422), Expect = 4.030e-42 Identity = 105/234 (44.87%), Postives = 138/234 (58.97%), Query Frame = 1 Query: 346 PSHLVVLSHGLAGSADDLSYLKQSLERAGGPGVLVHSARCNQGKTKDGVAEGGGRLAKEILELVGSEPSLSRISLVGNSLGGLYVR-YAAKLLYSNSDAGSPVGGA----TIAGLKPSVFMTIACPHLGVRRFTYVPLPSMLH-PLAGVFVGKTGADLIGDDSGDGTXXXXXXXXXXXRARKGAGSAQDGRESILLYGMSTSEEFLRPLKAFRWRRAYANRRGDFMVPYGTAAF 1029 P HLVVL HGL+G+A+DL+YL LE P +L H R N+G+T+DGV G R+ +E+ LV + PSLS IS VGNSLGG+YVR A+LL S S S +G T+AGL P+ +TIA PHLGVR FTYV LPS+L ++ + G++G DL +D A+ R LL+ M+TS +L L++F+ RRAY GDFMVP+ TA F Sbjct: 58 PRHLVVLVHGLSGTAEDLAYLGGLLEVH--PSILSHRTRANEGRTRDGVVAGAARVEREVRTLVAAHPSLSTISFVGNSLGGIYVREVVARLLDSPSVEESTLGARPAPRTLAGLTPAALLTIATPHLGVRSFTYVQLPSVLRRAVSDLLAGQSGRDLFLED------------------------AEQSRP--LLWRMATSRRYLDALRSFQVRRAYGAAAGDFMVPFSTALF 263 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig641.15085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig641.15085.1 >prot_L-elsbetiae_contig641.15085.1 ID=prot_L-elsbetiae_contig641.15085.1|Name=mRNA_L-elsbetiae_contig641.15085.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=535bp MRHTANILHLLSFLTFLFLSARGSAFLLPVVVGATMTGEPSPPPPAAALAback to top mRNA from alignment at L-elsbetiae_contig641:3518..9110- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig641.15085.1 ID=mRNA_L-elsbetiae_contig641.15085.1|Name=mRNA_L-elsbetiae_contig641.15085.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5593bp|location=Sequence derived from alignment at L-elsbetiae_contig641:3518..9110- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig641:3518..9110- >mRNA_L-elsbetiae_contig641.15085.1 ID=mRNA_L-elsbetiae_contig641.15085.1|Name=mRNA_L-elsbetiae_contig641.15085.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3210bp|location=Sequence derived from alignment at L-elsbetiae_contig641:3518..9110- (Laminarionema elsbetiae ELsaHSoW15)back to top |