mRNA_L-elsbetiae_contig6373.15035.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Match: D7FXE1_ECTSI (WD repeat-containing protein 60 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE1_ECTSI) HSP 1 Score: 696 bits (1797), Expect = 4.600e-229 Identity = 554/1095 (50.59%), Postives = 613/1095 (55.98%), Query Frame = 1 Query: 1 MDPPRDRAPAAADAKPRRRGSGTGSKKPXXXXXXXXXXXA------AGPGGERAPGHDGTNPRRGSSSGGGVAARADLVPHQGPDGDAAQRKDHARGSDPTSASRSRSGAKGVRGGSGRSDVGDGE--GRIRPERVXXXXXXXXXXAAEGGPVGDG--GGAGSSVDRAILRKWRSDASAAVA--------IGDGRPAEQDLP-AEVEAEDNGGGYDDEDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSSRGGGVGGAAGAVVSPALKMRKTGD-VHAPDDKALEELRESLREENIVARERKVARPGTNVRTHAEAKPVSGSGQTSRGAKGAKGSRNAAXXXXXXXXXXXXXXXSSPAVAKGTFSVQASADAKPSRRSSAFKMADAKALTRALAKGDPRAARVLAIRAASRLGVESIRLFDQAPILPIDLYHRRLRGQPALIRQAGSQTNEDARSVEAQTDEVVCADKEAQFHLGHDDTALENLMRRLRSNRRPVVRLENPAGRRSGEEEKGHDWTVKDGDEQAAGAAQGS-TTTFKGVYSANGPDNRGVHESSQPDEY---LRRHGADIGDGGSGQRPP-------PAPFRLGKFLQRASVVMETLCEENLLHASV--RAGASPVSSASGGDGGGDDREGRLLFSRFPAKGGEGWEEVAGDGVAYGLGRAAPEQAAVTSVSRPGQEEKRREADASAXXXXXXXXXXXXXXXXXXLLKGSEVVGVEFSRVKRSMLVTAHARPAGRRRRGSGRSSGDGADEGVDNXXXXXXXXXXXXXEAVGERGAALEGSGVICVWNTDNVKAGPVSVLCGEGVFSCLCLALHQAHVVTAGTAEGCLLLWDLRGPASTNLAVESRNLGLSCGIRPPTYTTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGVLSLAEANFFQVASLDDRGIVSIWIASEAPRGDDGGSQTDLGLGPGGRVRLTLSKSIRPGAQ------FFPLPGGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGAAASTRALAFPPGDPNRFLVGGSSGRVAHASRLGNPPLPRVYRPPR 3168 +DP RDR AD KPRRRGS XXXXXXXXXXX AG GGER H PRR S GG+AA DL AQ K R ++ S SR+R GAKGVR G +D G+ + ER A PV + GG+G VDRAIL+KWRSDASAAVA + DGR A Q P EVE ED GGGYDDE F RP S+RG G GAVVSPALKMR+ GD + APDDK LEELR+SLREENI ARERKVARP A A S S AK +G+ XXXXXXXXXX S+ AVAKG FSV ASAD K SR+ S FKMADAKALTRALAKGDPRA RV AIR ASRL VES+RLFDQ PILPIDLYHRRLRGQPALIRQAG+QTN+DARSVE QTDE+V + KE QFHLGHDDTALENLMRRLRSNRRP R + G G+ ++ TV DG E + GS TTTFKG+Y+ NG + + P E R+G D DG SG+ P P RLGKFL++ASVVMETLCEENLLHA V R G+ P+ A G RE LFS + GEGWEEV AA EEKRR+ LL+GSEVVGVEFS+VKRSMLVTAHARP GRR XXXXXXXXXXXX ER A LEG GV+CVWNT+NV+ PVSVLCGEG+FSCLCLA HQAHVV GT EGCLLLWDLR AS A ESR LGL CGIR PTY TAGG +GG++SL +A FQVASLDDRG VSIW+ASE PRGD+GGSQTDLGL PGGRVRL LSK++RPG Q P GG ++ AA S RALAF P DPNRFL+G SS RV HASRLG PP PR Y PPR Sbjct: 9 LDPSRDRHREPADEKPRRRGSRPSGAXXXXXXXXXXXXXXXXXXXPAGAGGERVREHGSDGPRRES---GGLAASPDLA--------LAQDKGSVRPAEAGS-SRTRPGAKGVRRRIGGTDHDGGQVHAALGEER--------HQIAQRDQPVAERELGGSGGGVDRAILQKWRSDASAAVADDVGRNPALPDGRVAPQVPPDMEVEDEDCGGGYDDECFEEYSDEFDGEGEDEGPPPPVGKATAASVT---RPGSARGEG----GGAVVSPALKMRRPGDNIQAPDDKVLEELRDSLREENIAARERKVARPSPKPSEAATADVKSSSD-----AKAVRGAXXXXXXXXXXXXXXTGGEASA-AVAKGKFSVDASADVKRSRKGSGFKMADAKALTRALAKGDPRAERVRAIRGASRLEVESVRLFDQVPILPIDLYHRRLRGQPALIRQAGTQTNDDARSVEGQTDEIVQSHKEVQFHLGHDDTALENLMRRLRSNRRPPERHQ-AKGEEGGQTQQR---TVVDGGEDVPASGPGSATTTFKGIYNGNG-----MVAGTDPGEQEYPAPRYGTDF-DGSSGRVSSAGGSDTLPPPLRLGKFLRQASVVMETLCEENLLHAPVKRRGGSHPLDPARGEHEDAVGRERGALFSGAGGREGEGWEEVXXXXXXXXXXXXXATAAATEDTGSSTAEEKRRQGGDEGRVRGRGAGA---------LLEGSEVVGVEFSKVKRSMLVTAHARPVGRR-------------------XXXXXXXXXXXXXXTDEREAVLEGCGVVCVWNTENVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLRETASEGRAAESRELGLHCGIRAPTYVTAGG-------DGRGEDGGLSKAGCGHSSKVVSVVAIPSPTGGVGMDGGGGGIGGMISLGDACSFQVASLDDRGTVSIWLASEVPRGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLAAAVRPRGGG--------------GAVPVSVPRFSTSTRNRLDQTTDTTASSAAAGSARALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPR 1011
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Match: A0A835Z6D0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D0_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.700e-24 Identity = 243/817 (29.74%), Postives = 323/817 (39.53%), Query Frame = 1 Query: 811 LEELRESLREENIVARERKVARPGTNVRTHAEAKP---------VSGSGQTSRGAKGAKGSRNAAXXXXXXXXXXXXXXXSSPAVAKGTFSVQASADAKPSRRSSAFKMADAKALTRALAKGDPRAAR------VLAIRAASRLGVESIRLFDQAPILPIDLYHRRLRG--------QPALIRQAGSQTNEDARSVEAQTDEVVCADKEAQFHLGHDDTALENLMRRLRSNRRPVVRLENPAGRRSGEEEKGHDWTVKDGDEQAAGAAQGSTTTFKGVYSANGPDNRGVHESSQPDE---YLRRHGADIGDGGSGQRPPPAPFRLGKFLQRASVVMETLCEENLLHASVRAGASPVSSASGGDGGGDDREGRLLFSRFPAKGGEGWEEVAGDGVAYGLGRAAPEQAAVTSVSRPGQEEKRREADASAXXXXXXXXXXXXXXXXXXLLKGSEVVGVEFSRVKRSMLVTAHARPAGRRRRGSGRSSGDGADEGVDNXXXXXXXXXXXXXEAV---GERGAALEGSGVICVWNTDNVK-AGPVS-VLCGEGVFSCLCLALHQA-HVVTAGTAEGCLLLWDLRGPASTNLAVESRNLGLSCGIRPPTYTTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGVLSLAEANFFQVASLDDRGIVSIWIASEAPRGDDGGS--QTDLGLGPGGRVRLTLSKSIRPGAQFFPLPGGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGAAASTRALAFPPGDPNRFLVGGSSGR-VAHASRLGNPPLPRVY 3156 ++ELR ++ +EN+ A+ + RP T HA A+ V G+G ++G KG G +G A+ A+P+ + +++A+AKA+++ L R AR + AA+RL E L+ AP+ P++ YH RLR QT +D R V QT+ AD EAQFH+G DDTALEN++ R R+ R RR G + G T T +GVY + G ++++ +E LR G RL FL+ + V+E LC EN+ + A + + + +G D GR S A TS R G A XXXXXXX L G+ + +S + +L A+AR A XXXXXXXXX AV G R A L G +TD + A P++ VL EG +C+C A H+ AG A+G + LWDLR P +CG+R PTY TA XXXXXXXXXXXXXXXXXXXX G+ A F ASLDDRG+V +W+A + DDGGS Q DLGL PGG VRL S+++ A P P G AA+ L F D NRFLVGG V H SRLG P+PR Y Sbjct: 113 MKELRSAMDQENMEAKRARALRP-TEPPPHASAEQQPVAEGKGGVEGAGLRAKGRKGGAG--------------------------EGAGPKGAALAAQPATQQ--YRLAEAKAVSQRLGGAAARGARCGXXXXARSAAAAARLSTERFVLYSAAPVGPLERYHARLRSGGXXXXXXXXXXXXXXXXQTRDDDRDVGTQTETARAADAEAQFHMGSDDTALENMLARARA-RXXXXXXXXXXHRRQGSD-PGVTLTAX------XXXXXXXTGEGEGVYEHGDREAPGTVDAAEAEERAAQLRXXXXXXXXXGGA--------RLAHFLRSVAPVVEALCVENIALSGGSAALAEAEARARDEGERDRAAGRAFASE-----------------------------ATTSWERLGA--------AXXXXXXXXXDDWAVEPWLRTALAGASAAALAYSAARPPLLAVAYARSA-------------------------XXXXXXXXXXAVCVWGARAAPLAG-------DTDASRPAAPLAAVLVAEGAPTCVCWGPAAAPHLCLAGAADGVVALWDLRTPCGGXXXXXXXERP-ACGLRRPTYATA-----------------PRSAAGGHASAVAXXXXXXXXXXXXXXXXXXXXXXGLFRAAATAF---ASLDDRGVVIVWLAMDVT--DDGGSAQQQDLGLAPGGSVRLAHSRTVDTRALPLPPPPTAS-------------LRQPRRSSRAAQETSVHSLCDTEGAVGGPAAA--CLCFFGRDSNRFLVGGXXXXAVLHCSRLGAQPVPRAY 777
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Match: UPI00106A462B (WD repeat-containing protein 60-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A462B) HSP 1 Score: 95.5 bits (236), Expect = 3.750e-16 Identity = 77/302 (25.50%), Postives = 118/302 (39.07%), Query Frame = 1 Query: 2266 ERGAALEGSGVICVWNTDNVKAGPVSVLCGEGVFSCLCLALHQAHVVTAGTAEGCLLLWDLRGPASTNLAVESRNLGLSCGIRPPTYTTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGVLSLAEANFFQVASLDDRGIVSIWIASEAPRGDDGGSQTDLGLGPGGRVRLTLSKSIR---PGAQFFPLPGGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGAAASTRALAFPPGDPNRFLVGGSSGRVAHASRLGNPPLPRVYRP 3162 ++ ++L+G GV+C WN + + C SC C + ++ +V AG +G +++WDLR +S + + +++ IR PT++TAG GG+ FQ+ASLD+ G+V+IW+ E + D+ GS+ DLGL PGGRV+L S SI+ P + F G++ T + F DPN F VG G V H +R G P+VYRP Sbjct: 699 DKDSSLQGRGVVCYWNVNEPSQPQKILYCESSPKSC-CFSPVKSSLVFAGLEDGSVVVWDLRESSSIHSTINNKDRQWV--IRRPTFSTAG-------------VLSNENHLTQVQKILPIAHPVDSAQALSRSAALQDEPGGMA-------FQLASLDENGVVNIWVVIELDKPDEAGSENDLGLAPGGRVKLIKSTSIQVESPHREIF----------------------------------------------FGSSVQTSVMQFSTIDPNHFYVGTDRGWVVHCTRYGGKTHPKVYRP 931
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Match: A0A6S7GHZ8_PARCT (WD repeat-containing 60-like n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GHZ8_PARCT) HSP 1 Score: 89.4 bits (220), Expect = 1.250e-14 Identity = 74/302 (24.50%), Postives = 115/302 (38.08%), Query Frame = 1 Query: 2266 ERGAALEGSGVICVWNTDNVKAGPVSVLCGEGVFSCLCLALHQAHVVTAGTAEGCLLLWDLRGPASTNLAVESRNLGLSCGIRPPTYTTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGVLSLAEANFFQVASLDDRGIVSIWIASEAPRGDDGGSQTDLGLGPGGRVRLTLSKSIR---PGAQFFPLPGGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGAAASTRALAFPPGDPNRFLVGGSSGRVAHASRLGNPPLPRVYRP 3162 ++ L+ G++C WN + + C SC C + ++ +V AG +G +++WD+R +S + + +++ +R PT++TAG GG+ FQ+ASLD+ G+V+IW+ E + D+ GS+ DLGL PGGRV+L S SI+ P + F G+A T + F DPN F VG G V H +R G P+VYRP Sbjct: 131 DKNDCLQERGIVCYWNVNEPSQPQKILYCESSPKSC-CFSSVKSSLVFAGLEDGSVVVWDVRESSSLHSTINNKDNQWV--VRRPTFSTAG-------------VLFSENHLSPVQNILPIALPIDSAQALSRSTVLQDEPGGMA-------FQLASLDESGVVNIWVVIELDKPDEAGSENDLGLAPGGRVKLIKSTSIQVESPHREMFV----------------------------------------------GSAIQTSTMQFSTLDPNHFYVGTDRGWVVHCTRYGGRAHPKVYRP 363
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Match: UPI001CF1AD98 (cytoplasmic dynein 2 intermediate chain 1-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1AD98) HSP 1 Score: 90.1 bits (222), Expect = 1.740e-14 Identity = 74/294 (25.17%), Postives = 109/294 (37.07%), Query Frame = 1 Query: 2281 LEGSGVICVWNTDNVKAGPVSVLCGEGVFSCLCLALHQAHVVTAGTAEGCLLLWDLRGPASTNLAVESRNLGLSCGIRPPTYTTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGVLSLAEANFFQVASLDDRGIVSIWIASEAPRGDDGGSQTDLGLGPGGRVRLTLSKSIRPGAQFFPLPGGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGAAASTRALAFPPGDPNRFLVGGSSGRVAHASRLGNPPLPRVYRP 3162 ++ G++CVWNT+N P +L E C CL+ +A + AG +G ++ WDLR P ST+ + + RPPT++TAG +L L+ FQ+ASL++ V +W+ E R + GS++DLGL PGG+++L S SI + F P N ++ L F P DPN VG G V H R G P+ +RP Sbjct: 753 VQDKGLVCVWNTNN-PFNPEKLLICESTPRCCCLSPSKATLAFAGLEDGSIVAWDLREPLSTHYMNKVCDGDNEVIFRPPTFSTAG---------------VLKKDESHLSPVVSLLPLVMPGDSVRASIASNVMSDDLLGLS----FQLASLEENASVYLWVVVELDRTNSAGSESDLGLSPGGKIKLIKSSSIAVQSPFRNFP-------------------------------------------NRSSLQALILRFLPHDPNHVYVGTDGGYVVHCDRHGGRASPKAHRP 983
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Match: UPI0007043B69 (LOW QUALITY PROTEIN: WD repeat-containing protein 60 n=1 Tax=Tupaia chinensis TaxID=246437 RepID=UPI0007043B69) HSP 1 Score: 89.0 bits (219), Expect = 3.910e-14 Identity = 73/296 (24.66%), Postives = 115/296 (38.85%), Query Frame = 1 Query: 2278 ALEGSGVICVWNTDNVKAGPVSVLCGEGVFSCLCLALHQAHVVTAGTAEGCLLLWDLRGPASTNLAVESRNLGLSCGIRPPTYTTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGVLSLAEANF-FQVASLDDRGIVSIWIASEAPRGDDGGSQTDLGLGPGGRVRLTLSKSIRPGAQFFPLPGGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGAAASTRALAFPPGDPNRFLVGGSSGRVAHASRLGNPPLPRVYRP 3162 +L+G V+CVW+ +GP VL E +C C + +A ++ AGTA G +L+WDLR + + V + +C R PT++T G L + E F +ASLD+ G++++W+ E P+ D GS +DLGL PGGR++L S +++ G+ G T ++ F P DPN F+VG G V+H++R PR ++P Sbjct: 726 SLDGRYVLCVWDIWQ-PSGPQKVLISESKVTCCCFSPSKASLLFAGTAHGSVLVWDLREDSRLHRYVGPSDC--TCTFRTPTFSTDG---------------------TLTSVSHRSRLQAVEPVPTSVYRKQSCVLSPFSTQEEMGLSFHIASLDESGVLNVWVVVELPKADTAGSVSDLGLLPGGRIKLVHSAAVQLSDSLPHQGSGLWG-----------------------------------------TVQTLSVKFLPSDPNHFVVGTDMGLVSHSTRQEVTASPRSFKP 956
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Match: UPI001CFBE812 (cytoplasmic dynein 2 intermediate chain 1 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFBE812) HSP 1 Score: 86.3 bits (212), Expect = 1.320e-13 Identity = 74/296 (25.00%), Postives = 114/296 (38.51%), Query Frame = 1 Query: 2281 LEGSGVICVWNTDNVKAGPVSVLCGEGVFSCLCLALHQAHVVTAGTAEGCLLLWDLRGPASTNLAVESRNLGLSCGIRPPTYTTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGVLSLAEAN--FFQVASLDDRGIVSIWIASEAPRGDDGGSQTDLGLGPGGRVRLTLSKSIRPGAQFFPLPGGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGAAASTRALAFPPGDPNRFLVGGSSGRVAHASRLGNPPLPRVYRP 3162 L+ ++CVWN + P VL E C C + +A +V AGT +G ++LWDLR +S + ++ + R PT+ T G L + E++ FQ+ASLD+ G++++W+ E P+ D GSQ DLGL PGG+V+L S I + + A+ T +L F P DPN F++G +G V+H +R G PR+Y+P Sbjct: 167 LDSKFILCVWNIWE-PSSPQKVLICESEVRCCCFSPGKATLVFAGTVDGSVVLWDLRERSSLHHTMKIGDFEWI--FREPTFCTDG---------------------ILSTVNHSCPVQAIETISIAAADGKHHSLSFSVPHEESSGLSFQLASLDESGLLNLWVVVELPKADIAGSQLDLGLIPGGKVKLIHSSRINMNSNILQMG------------------------------------------AHLGVLQTSSLKFLPSDPNHFIMGTDTGLVSHGTRHGLRTSPRLYKP 396
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Match: A0A3B1IRJ2_ASTMX (WD repeat domain 60 n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1IRJ2_ASTMX) HSP 1 Score: 86.7 bits (213), Expect = 1.450e-13 Identity = 77/297 (25.93%), Postives = 114/297 (38.38%), Query Frame = 1 Query: 2281 LEGSGVICVWNTDNVKAGPVSVLCGEGVFSCLCLALHQAHVVTAGTAEGCLLLWDLRGPASTNLAVESRNLGLSCGIRPPTYTTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGVLSLAEANF---FQVASLDDRGIVSIWIASEAPRGDDGGSQTDLGLGPGGRVRLTLSKSIRPGAQFFPLPGGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGAAASTRALAFPPGDPNRFLVGGSSGRVAHASRLGNPPLPRVYRP 3162 LE +ICVWN A P +L E C C + +A +V AGTA G ++LWDLR + + ++ + G +R PT++T G L E + FQ+ SLD+ G++++W+ +E P+ DD GSQTDLGL PGG+V+L S SI+ + GV G + L F P D N + +G + G V +R G +P++YRP Sbjct: 335 LESKTLICVWNVWEPSA-PQRILIYEAEVRCCCFSPGKATLVFAGTAVGSVVLWDLREHSGAHSSLSAD--GEEFTLRYPTFST------------------------DAVLAGAGHFSSVVSVEPVVVNVESGIRGSFLEDQEESLGLLFQLGSLDENGLLNLWVVTELPKADDSGSQTDLGLRPGGKVKLLHSSSIQTSDRS--TRHGVTGVTPLL---------------------------------------SLLLKFLPSDSNHYFIGTNMGVVRRGTRHGLRAVPKLYRP 563
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Match: A0A4W3GL00_CALMI (Uncharacterized protein n=4 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GL00_CALMI) HSP 1 Score: 85.9 bits (211), Expect = 3.490e-13 Identity = 77/297 (25.93%), Postives = 110/297 (37.04%), Query Frame = 1 Query: 2281 LEGSGVICVWNTDNVKAGPVSVLCGEGVFSCLCLALHQAHVVTAGTAEGCLLLWDLRGPASTNLAVESRNLGLSCGIRPPTYTTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGVLSLAE----ANFFQVASLDDRGIVSIWIASEAPRGDDGGSQTDLGLGPGGRVRLTLSKSIRPGAQFFPLPGGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGAAASTRALAFPPGDPNRFLVGGSSGRVAHASRLGNPPLPRVYR 3159 L+ +ICVWN A P VL E C C + +A V AGT +G ++LWDLR +ST+ ++ + + R PT++T G LG L + FQ+ASLD+ G++++W+ E + D GS TDLGL PGG+V+L S SI + F P L T + F P DPN F VG G V+H + G P++Y+ Sbjct: 770 LDNKYIICVWNIWEPSA-PQKVLVCESAVQCCCFSPGRAISVFAGTVDGSVVLWDLRQHSSTHHTLQIGSQEWT--FRSPTFSTDG-----------------------VLTAVNHSCAVKAVAPVSSPSYENQGLGLPLLTSHEGSSGQSFQMASLDESGLLNLWVVVELQKADVAGSLTDLGLSPGGKVKLLHSSSININSSFIP-----------------------------------------RDLMQLGPPQTLNIKFLPSDPNHFFVGTDIGLVSHGTLHGLRAPPKLYK 999
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Match: A0A1S3I0W6_LINUN (WD repeat-containing protein 60-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I0W6_LINUN) HSP 1 Score: 85.1 bits (209), Expect = 3.840e-13 Identity = 74/298 (24.83%), Postives = 108/298 (36.24%), Query Frame = 1 Query: 2281 LEGSGVICVWNTDNVKAGPVSVLCGEGVFSCLCLALHQAHVVTAGTAEGCLLLWDLRGPASTNLAVESRNLGLSCGIRPPTYTTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGVLSLAEANF-----FQVASLDDRGIVSIWIASEAPRGDDGGSQTDLGLGPGGRVRLTLSKSIRPGAQFFPLPGGVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGAAASTRALAFPPGDPNRFLVGGSSGRVAHASRLGNPPLPRVYR 3159 L G+I +WNT N + P +L E +C C + +A + AG +G L++WDLR PAS + +R +R PTY TAG V+S E +F FQ+AS ++ V +W+ +E D+ GS++DLGL PGGRV+L S S + + ++ LA P +P+ F VG SG V H R G +PR Y+ Sbjct: 256 LANKGMISLWNT-NEPSRPKQILTCESQPTCCCFSPEKATLAFAGMTDGSLVVWDLREPASMHHVYRTREEEWL--LRKPTYFTAG-------------------------ILGEENHHSPVTTVIPIVSAADSAKASVMSAKETDFGTGLSFQLASAEENAWVHLWVVAEISNPDEAGSESDLGLAPGGRVKLLKSSSCK-------------------------------------------LENPTRDVRLKSSLRAHELALSPANPSNFYVGTDSGYVYHGVRSGGKAVPRTYK 482 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6373.15035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6373.15035.1 >prot_L-elsbetiae_contig6373.15035.1 ID=prot_L-elsbetiae_contig6373.15035.1|Name=mRNA_L-elsbetiae_contig6373.15035.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1083bp MDPPRDRAPAAADAKPRRRGSGTGSKKPTRRKSSSSSSTAAGPGGERAPGback to top mRNA from alignment at L-elsbetiae_contig6373:44..8274- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6373.15035.1 ID=mRNA_L-elsbetiae_contig6373.15035.1|Name=mRNA_L-elsbetiae_contig6373.15035.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8231bp|location=Sequence derived from alignment at L-elsbetiae_contig6373:44..8274- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6373:44..8274- >mRNA_L-elsbetiae_contig6373.15035.1 ID=mRNA_L-elsbetiae_contig6373.15035.1|Name=mRNA_L-elsbetiae_contig6373.15035.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6498bp|location=Sequence derived from alignment at L-elsbetiae_contig6373:44..8274- (Laminarionema elsbetiae ELsaHSoW15)back to top |