mRNA_L-elsbetiae_contig6368.15028.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Match: A0A6H5KLT5_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLT5_9PHAE) HSP 1 Score: 309 bits (792), Expect = 2.590e-101 Identity = 184/363 (50.69%), Postives = 210/363 (57.85%), Query Frame = 1 Query: 1 GQEPRARFIKKAACAAASITGLVVAAPRLMGGNSEVVAPVLAEETAGGMASVAPALAEEGITSKFDYIKFDVQLSEGESGSFIVEVRPDWAPLGAQRFNTLSKAGFFAGCRFFRVLQGFIAQFGINGDPTVQAKYVGARIKDDPVTQSNKRGTVVFATSGKDSRTTQASW*YLCFMCAHACWRFFFNLAMGFSSRR*TYGVPTFVCTYIDAYVWPLNLIPPLFCRTTYLLPTSTRFRARRFFAYLP*ERLLRERAEQFGAPLTPPIRSATPTPNLPLAPQLFVNYADNAFLDKSGFSPIGK---GMNVADSLYRGYGEGAPQGNGPNQGKIQRDGNAYLEKSFSKLSYIKSTSTVPRPADGDF 1080 G +PR RFI KAACAAAS+TGL VAAP ++G +S +A ETA +A VAPALAEE + SK Y+KFDVQLS+ ESGSF+VEVRPDWAPLGA RF LSKAGFF CRFFRVL+GF+AQFGINGDP VQAKY GA ++DDPVTQSNKRGTVVFATSGK+SRTTQ LF+N+ DN FLDKSGFSPIG+ GM+VAD LY+GYGEGAPQGNGPNQGKIQ GNAYL+ SF KLSYIKS ++VPRPA+GD+ Sbjct: 34 GTQPRGRFIAKAACAAASLTGLAVAAPFIVGSDSADGVAAVAAETARNVA-VAPALAEEALGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQ-----------------------------------------------------------------------------------------------------------------LFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSATSVPRPAEGDY 282
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Match: A0A7S3YYD7_9EUKA (Peptidylprolyl isomerase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YYD7_9EUKA) HSP 1 Score: 181 bits (459), Expect = 1.020e-50 Identity = 121/331 (36.56%), Postives = 157/331 (47.43%), Query Frame = 1 Query: 88 MGGNSEVVAP---VLAEETAGGMASVA-PALAEEGITSKFDYIKFDVQLSEGESGSFIVEVRPDWAPLGAQRFNTLSKAGFFAGCRFFRVLQGFIAQFGINGDPTVQAKYVGARIKDDPVTQSNKRGTVVFATSGKDSRTTQASW*YLCFMCAHACWRFFFNLAMGFSSRR*TYGVPTFVCTYIDAYVWPLNLIPPLFCRTTYLLPTSTRFRARRFFAYLP*ERLLRERAEQFGAPLTPPIRSATPTPNLPLAPQLFVNYADNAFLDKSGFSPIGK----GMNVADSLYRGYGEGAPQGNGPNQGKIQRDGNAYLEKSFSKLSYIKSTSTV 1056 +GG+S VV+ + G+A+VA A AEEG F+ ++F+VQL+ ++ F++EV P+WAPLGA++F L GF+ CRFFRV++GF+ Q+GINGDP V KY I+DDPV SNKRGT+ FATSGK+SRTTQ LF+N+ DN FLD+ GFSPIGK GM V DS+Y YGEGAP G+GP+QG+IQR GNAYLEK++ KLSYIK+ Sbjct: 110 LGGDSPVVSRRDVAVGVPVGAGLAAVAGKAKAEEGSGGVFN-VEFEVQLTADKTDKFVIEVHPEWAPLGAEQFKKLVTDGFYNDCRFFRVVEGFVVQWGINGDPDVNKKYKKP-IQDDPVKTSNKRGTLTFATSGKNSRTTQ-----------------------------------------------------------------------------------------------------------------LFINFGDNTFLDRLGFSPIGKVAGDGMKVVDSIYDRYGEGAPNGSGPDQGRIQRSGNAYLEKNYPKLSYIKTAKVA 325
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Match: A0A7S2CBJ7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CBJ7_9STRA) HSP 1 Score: 176 bits (445), Expect = 2.530e-49 Identity = 113/308 (36.69%), Postives = 139/308 (45.13%), Query Frame = 1 Query: 136 AGGMASVAPALAEEGITSKFDYIKFDVQLSEGESGSFIVEVRPDWAPLGAQRFNTLSKAGFFAGCRFFRVLQGFIAQFGINGDPTVQAKYVGARIKDDPVTQSNKRGTVVFATSGKDSRTTQASW*YLCFMCAHACWRFFFNLAMGFSSRR*TYGVPTFVCTYIDAYVWPLNLIPPLFCRTTYLLPTSTRFRARRFFAYLP*ERLLRERAEQFGAPLTPPIRSATPTPNLPLAPQLFVNYADNAFLDKSGFSPIG---KGMNVADSLYRGYGEGAPQGNGPNQGKIQRDGNAYLEKSFSKLSYIKSTS 1050 AG +A +PA AE FD + FD+ +G G+ ++EV P+WAPLGA+RF L G F RFFRVL GFIAQFGI+GDP V AK+ G ++DDPV SNKRGT+ FAT G ++RT+Q +F NY DN FLD+ GFSP G GM++ + LY GYGEGAP G GPNQGKIQ+DGNAYL++SF KLSYIK S Sbjct: 77 AGALALSSPARAE---AETFD-VTFDIVNEDGTGGAVVIEVHPEWAPLGAERFKELVSTGTFDENRFFRVLPGFIAQFGISGDPAVSAKWRGQNLRDDPVKVSNKRGTLTFATGGPNTRTSQ-----------------------------------------------------------------------------------------------------------------IFFNYGDNQFLDRQGFSPFGTVKSGMDIVEKLYSGYGEGAPSGKGPNQGKIQKDGNAYLKESFPKLSYIKKAS 267
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Match: A0A7S2TLE1_9EUKA (Peptidylprolyl isomerase n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TLE1_9EUKA) HSP 1 Score: 176 bits (446), Expect = 6.750e-49 Identity = 113/306 (36.93%), Postives = 148/306 (48.37%), Query Frame = 1 Query: 142 GMASVAPAL-AEEGITSKFDYIKFDVQLSEGESGSFIVEVRPDWAPLGAQRFNTLSKAGFFAGCRFFRVLQGFIAQFGINGDPTVQAKYVGARIKDDPVTQSNKRGTVVFATSGKDSRTTQASW*YLCFMCAHACWRFFFNLAMGFSSRR*TYGVPTFVCTYIDAYVWPLNLIPPLFCRTTYLLPTSTRFRARRFFAYLP*ERLLRERAEQFGAPLTPPIRSATPTPNLPLAPQLFVNYADNAFLDKSGFSPIGK----GMNVADSLYRGYGEGAPQGNGPNQGKIQRDGNAYLEKSFSKLSYIKS 1044 G+A+VA + AEEG F+ ++F+VQL+ ++ F++EV P+WAP GA++F L GF+ CRFFRV++GF+ Q+GINGDP V KY A I+DDPV SN+RGT+ FATSGK+SRTTQ LF+N+ DN FLD+ GFSPIGK GM + DS+Y YGEGAP G+GP+QG+IQR GNAYLEK++ KLSYIK+ Sbjct: 122 GLAAVAGKVKAEEGSGGIFN-VEFEVQLTADKTDKFVIEVHPEWAPHGAEQFKKLVNDGFYDDCRFFRVVEGFVVQWGINGDPEVNKKYKKA-IQDDPVKTSNERGTLTFATSGKNSRTTQ-----------------------------------------------------------------------------------------------------------------LFINFGDNTFLDRLGFSPIGKVVGDGMKIVDSIYDRYGEGAPNGSGPDQGRIQRSGNAYLEKNYPKLSYIKT 312
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Match: A0A7S3YYN4_9EUKA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YYN4_9EUKA) HSP 1 Score: 171 bits (432), Expect = 1.570e-48 Identity = 106/291 (36.43%), Postives = 133/291 (45.70%), Query Frame = 1 Query: 196 DYIKFDVQLSEGESGSFIVEVRPDWAPLGAQRFNTLSKAGFFAGCRFFRVLQGFIAQFGINGDPTVQAKYVGARIKDDPVTQSNKRGTVVFATSGKDSRTTQASW*YLCFMCAHACWRFFFNLAMGFSSRR*TYGVPTFVCTYIDAYVWPLNLIPPLFCRTTYLLPTSTRFRARRFFAYLP*ERLLRERAEQFGAPLTPPIRSATPTPNLPLAPQLFVNYADNAFLDKSGFSPIGK----GMNVADSLYRGYGEGAPQGNGPNQGKIQRDGNAYLEKSFSKLSYIKSTSTV 1056 D + VQL+ ++ F++EV P+WAPLGA++F L GF+ CRFFRV++GF+ Q+GINGDP V KY I+DDPV SNKRGT+ FATSGK+SRTTQ LF+N+ DN FLD+ GFSPIGK GM V DS+Y YGEGAP G+GP+QG+IQR GNAYLEK++ KLSYIK+ Sbjct: 4 DVKQHQVQLTADKTDKFVIEVHPEWAPLGAEQFKKLVTDGFYNDCRFFRVVEGFVVQWGINGDPDVNKKYKKP-IQDDPVKTSNKRGTLTFATSGKNSRTTQ-----------------------------------------------------------------------------------------------------------------LFINFGDNTFLDRLGFSPIGKVAGDGMKVVDSIYDRYGEGAPNGSGPDQGRIQRSGNAYLEKNYPKLSYIKTAKVA 180
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Match: A0A7S2RJE7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJE7_9STRA) HSP 1 Score: 174 bits (440), Expect = 2.890e-48 Identity = 111/303 (36.63%), Postives = 138/303 (45.54%), Query Frame = 1 Query: 157 APALAEEGITSKFDYIKFDVQLSEGESGSFIVEVRPDWAPLGAQRFNTLSKAGFFAGCRFFRVLQGFIAQFGINGDPTVQAKYVGARIKDDPVTQSNKRGTVVFATSGKDSRTTQASW*YLCFMCAHACWRFFFNLAMGFSSRR*TYGVPTFVCTYIDAYVWPLNLIPPLFCRTTYLLPTSTRFRARRFFAYLP*ERLLRERAEQFGAPLTPPIRSATPTPNLPLAPQLFVNYADNAFLDKSGFSPIGK---GMNVADSLYRGYGEGAPQGNGPNQGKIQRDGNAYLEKSFSKLSYIKSTSTV 1056 AP LAE+ + FD + F VQLS E G ++V PDW+P GAQRF L +AGF+ CRFFRVL GF+AQFGINGDP V +++ G ++DDPVT +N RGT+ FAT G +SRTTQ +F+N+ DN FLD+SGFSP + GM++ + LY GYGEGAP GNGPNQG IQ GNAYL S+ KLS+IKS V Sbjct: 97 APGLAEDA-AAPFDVL-FTVQLSPEEEGQVGLKVHPDWSPRGAQRFRELVEAGFYNDCRFFRVLPGFVAQFGINGDPAVMSQWRGRNLRDDPVTVTNSRGTLSFATGGPNSRTTQ-----------------------------------------------------------------------------------------------------------------VFINFKDNKFLDRSGFSPFAEVTSGMDIVEKLYSGYGEGAPNGNGPNQGLIQSKGNAYLSASYPKLSFIKSAKVV 284
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Match: A0A835YRY8_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY8_9STRA) HSP 1 Score: 172 bits (436), Expect = 3.580e-48 Identity = 111/310 (35.81%), Postives = 143/310 (46.13%), Query Frame = 1 Query: 139 GGMASVAPALAEEGITSKFD-YIKFDVQLSEGESGSFIVEVRPDWAPLGAQRFNTLSKAGFFAGCRFFRVLQGFIAQFGINGDPTVQAKYVGARIKDDPVTQSNKRGTVVFATSGKDSRTTQASW*YLCFMCAHACWRFFFNLAMGFSSRR*TYGVPTFVCTYIDAYVWPLNLIPPLFCRTTYLLPTSTRFRARRFFAYLP*ERLLRERAEQFGAPLTPPIRSATPTPNLPLAPQLFVNYADNAFLDKSGFSPIGK---GMNVADSLYRGYGEGAPQGNGPNQGKIQRDGNAYLEKSFSKLSYIKSTSTV 1056 G A V A A +G ++ D ++F V+L+ G+ G+F+++V PDWAP GA RF L + FF RFFRVL+GF+AQFGI+GDP V AK+ + I+DDPVTQSNKRGTVVFAT+G ++RT+Q LF+N+ DNAFLDK GFSPIG+ GM+ DSLY YGEGAP+G GP+Q IQ GNAYL+ F LSYI + + Sbjct: 57 GAAAGVGVAAAPKGAFAEGDPKVQFQVELAPGKQGTFVMQVHPDWAPKGAARFLELVDSDFFTDVRFFRVLKGFVAQFGISGDPQVSAKWRASAIRDDPVTQSNKRGTVVFATAGANTRTSQ-----------------------------------------------------------------------------------------------------------------LFINFGDNAFLDKMGFSPIGEIVEGMDTVDSLYADYGEGAPRGKGPDQNAIQSRGNAYLKDKFPNLSYITNAKRI 253
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Match: A0A7S1GJ23_CYCTE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJ23_CYCTE) HSP 1 Score: 158 bits (399), Expect = 1.510e-43 Identity = 100/280 (35.71%), Postives = 123/280 (43.93%), Query Frame = 1 Query: 226 EGESGSFIVEVRPDWAPLGAQRFNTLSKAGFFAGCRFFRVLQGFIAQFGINGDPTVQAKYVGARIKDDPVTQSNKRGTVVFATSGKDSRTTQASW*YLCFMCAHACWRFFFNLAMGFSSRR*TYGVPTFVCTYIDAYVWPLNLIPPLFCRTTYLLPTSTRFRARRFFAYLP*ERLLRERAEQFGAPLTPPIRSATPTPNLPLAPQLFVNYAD--NAFLDKSGFSPIGK---GMNVADSLYRGYGEGAPQGNGPNQGKIQRDGNAYLEKSFSKLSYIKSTS 1050 EG SG +E++PDWAP G +RF L+ F+ GCRFFRVL GFIAQFGINGDP +Q+++ GA I DDPVT SN RGTVVFAT+G+++RT+Q +F+N + N FLD+ GFSPIGK GM++ D LY GYGEGAP G GPNQ IQ GN YL S+ KLSYI + Sbjct: 17 EGNSGVIQIELKPDWAPRGVERFEDLTSQSFWDGCRFFRVLPGFIAQFGINGDPNIQSRWRGANIPDDPVTVSNTRGTVVFATAGRNTRTSQ-----------------------------------------------------------------------------------------------------------------IFINTREQGNGFLDRQGFSPIGKVIQGMDIVDRLYAGYGEGAPSGKGPNQALIQLKGNDYLTSSYPKLSYISKAT 183
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Match: A0A6U4F362_9STRA (Peptidylprolyl isomerase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4F362_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.240e-42 Identity = 110/289 (38.06%), Postives = 128/289 (44.29%), Query Frame = 1 Query: 202 IKFDVQLSEGE-SGSFIVEVRPDWAPLGAQRFNTLSKAGFFAGCRFFRVLQGFIAQFGINGDPTVQAKYVGARIKDDPVTQSNKRGTVVFATSGKDSRTTQASW*YLCFMCAHACWRFFFNLAMGFSSRR*TYGVPTFVCTYIDAYVWPLNLIPPLFCRTTYLLPTSTRFRARRFFAYLP*ERLLRERAEQFGAPLTPPIRSATPTPNLPLAPQLFVNYADNAFLDKSGFSPIGK---GMNVADSLYRGYGEGAPQGNGPNQGKIQRDGNAYLEKSFSKLSYIKSTSTV 1056 IKF+V+ +G SGSF + RPDWAP G QRF TL++ F+ GCR FRVL GFIAQFGINGDP VQ+K+ + I DDPV +N RGTVVFAT+G ++RTTQ +F T N N FLDK GFSPI + GM+V D LY GYGEGAPQG GPNQG IQ GN YLE S+ KLSY S V Sbjct: 93 IKFEVENLDGTGSGSFTLRTRPDWAPNGVQRFETLTENKFWDGCRVFRVLPGFIAQFGINGDPQVQSKW-RSNIPDDPVKVTNSRGTVVFATAGPNTRTTQ------------------------------------------------------IFINT---------------------------------------------------------NPKGNGFLDKQGFSPIAEVVEGMDVVDKLYAGYGEGAPQGRGPNQGLIQAKGNEYLEPSYPKLSYFSSAKFV 269
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Match: A0A1F9Z9Q9_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Elusimicrobia bacterium RIFOXYB2_FULL_62_6 TaxID=1797970 RepID=A0A1F9Z9Q9_9BACT) HSP 1 Score: 155 bits (393), Expect = 1.370e-42 Identity = 98/276 (35.51%), Postives = 120/276 (43.48%), Query Frame = 1 Query: 238 GSFIVEVRPDWAPLGAQRFNTLSKAGFFAGCRFFRVLQGFIAQFGINGDPTVQAKYVGARIKDDPVTQSNKRGTVVFATSGKDSRTTQASW*YLCFMCAHACWRFFFNLAMGFSSRR*TYGVPTFVCTYIDAYVWPLNLIPPLFCRTTYLLPTSTRFRARRFFAYLP*ERLLRERAEQFGAPLTPPIRSATPTPNLPLAPQLFVNYADNAFLDKSGFSPIGK---GMNVADSLYRGYGEGAPQGNGPNQGKIQRDGNAYLEKSFSKLSYIKSTSTV 1056 G F VEV DWAPLGA RF L KAG+F FFRV+ GF+ QFGI+GDP V AK+ ARI+DDPV QSN +G + +A +G D+RTTQ LF+N+ +NAFLD GF P GK GM+V DSLY GYGEGAP+G GP+QG+IQ +GNAYL+K F K+ YI S + Sbjct: 27 GDFTVEVYKDWAPLGADRFYNLVKAGYFTDIAFFRVVSGFMVQFGIHGDPAVSAKWREARIQDDPVKQSNAKGNLTYAMAGPDTRTTQ-----------------------------------------------------------------------------------------------------------------LFINFGNNAFLDSQGFPPFGKVTEGMSVVDSLYSGYGEGAPRGMGPDQGRIQMEGNAYLKKDFPKMDYILSAEVL 189 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6368.15028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6368.15028.1 >prot_L-elsbetiae_contig6368.15028.1 ID=prot_L-elsbetiae_contig6368.15028.1|Name=mRNA_L-elsbetiae_contig6368.15028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp MGGNSEVVAPVLAEETAGGMASVAPALAEEGITSKFDYIKFDVQLSEGESback to top mRNA from alignment at L-elsbetiae_contig6368:989..3236+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6368.15028.1 ID=mRNA_L-elsbetiae_contig6368.15028.1|Name=mRNA_L-elsbetiae_contig6368.15028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2248bp|location=Sequence derived from alignment at L-elsbetiae_contig6368:989..3236+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6368:989..3236+ >mRNA_L-elsbetiae_contig6368.15028.1 ID=mRNA_L-elsbetiae_contig6368.15028.1|Name=mRNA_L-elsbetiae_contig6368.15028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig6368:989..3236+ (Laminarionema elsbetiae ELsaHSoW15)back to top |