mRNA_L-elsbetiae_contig6356.15013.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Match: D7G5C3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C3_ECTSI) HSP 1 Score: 448 bits (1152), Expect = 2.560e-151 Identity = 235/298 (78.86%), Postives = 253/298 (84.90%), Query Frame = 2 Query: 53 MVGLDQDQVRRGASALLKHIKNSAVGKSTLIEDEGEVVLAQISLHKIPGDVSAKPIPIAIPHSLRKQEDCDMCLIVKDNAKAWIKETLENEPMEGLTKVIKLDKLRTQYKDFKDRRQLLSQYDLFLADDRILPMLTKALGKTFLKAKKQPVPIKLERRSSLAKQIARARDSAFLVGSYGDCWVVKLANTAMTEGQVVENLMAGITAVVEKIPRKWKNVKAINIKCSNSVALPVYSNLGDLPPVPPADEARAAKXXXXXXXXXXGVGDK-------KKRKPRPLIRQQLNKLKEEAKAE 925 MV D+ QVRR A ALLKH+ +SA GK +LIEDEGEVVLAQISLHKIPGDV AKP+PIAIPH LRK+EDCDMCLIVKDNAK WIKE E EP+EGLTK+IKLDKLRTQYKDFKDRR+LLSQ+DLFLADDRILPMLTKALGKTFLK KKQPVPIKLERR+S AKQIARARDSAFLVGS+GDCW VKLANT+MTE QVVENLM G+ AVVEKIPRKWKNVKAINIKCS+SVALPVYSN+GDLPP P A +A A G G + KKRKPRPLIRQQLNKLKEEAKAE Sbjct: 1 MVSFDEAQVRRAARALLKHVNSSAAGKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVYSNIGDLPPAPSAKKATVA---GKEEAAGEGEGKEPNSHSQAKKRKPRPLIRQQLNKLKEEAKAE 295
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Match: A0A7S2CVK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVK6_9STRA) HSP 1 Score: 210 bits (535), Expect = 3.240e-59 Identity = 110/243 (45.27%), Postives = 155/243 (63.79%), Query Frame = 2 Query: 38 TASTTMVGLDQDQVRRGASALLKHIKNSAVGKSTLIEDEGEVVLAQISLHKIPGDVSAKPIPIAIPHSLRKQEDCDMCLIVKDNAKAWIKETL-ENEPMEGLTKVIKLDKLRTQYKDFKDRRQLLSQYDLFLADDRILPMLTKALGKTFLKAKKQPVPIKLERRSSLAKQIARARDSAFLVGSYGDCWVVKLANTAMTEGQVVENLMAGITAVVEKIPRKWKNVKAINIKCSNSVALPVYSNL 763 T +T L+ + ALL K A + L + E +L QI+L +IPG+ S KPI +++PH + DC MCL +K K +K L E+ P+EGL K+I LDKLRT Y F RR+LL+ YDLFLAD+RILPML KALGKTF KKQP+P+ + R SL ++ RARDS L+ G C V + NT MT ++V N++A ++ +E IPRKWKN++AI +K ++S++LP+++ L Sbjct: 50 TQTTKRDNLNTHTITCAVKALLAFHKKKAESERKLPGADDERILIQITLQRIPGNSSPKPIQLSVPHPIHGDSDCQMCLFIKKEDKPLVKSLLMEDNPVEGLAKIITLDKLRTSYARFSQRRELLASYDLFLADERILPMLCKALGKTFFSRKKQPIPLCVTRHESLPHRVRRARDSTSLIIPSGTCVAVIVGNTNMTPKELVANIVAAASSAIEHIPRKWKNIQAIQVKTADSMSLPIFNKL 292
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Match: A0A7S2SVD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVD8_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.500e-54 Identity = 116/224 (51.79%), Postives = 146/224 (65.18%), Query Frame = 2 Query: 95 ALLKHIKNSAVGKSTLIEDEGEVVLAQISLHKIPGDVSAKPIPIAIPHSLRKQEDCDMCLIVKDNAKAWIKETL-ENEPMEGLTKVIKLDKLRTQYKDFKDRRQLLSQYDLFLADDRILPMLTKALGKTFLKAKKQPVPIKLERRSSLAKQIARARDSAFLVGSYGDCWVVKLANTAMTEGQVVENLMAGITAVVEKIPRKWKNVKAINIKCSNSVALPVYSNL 763 ALL + + + L+ E E V I L K+P S KPI + + H L DCDMCL +K K W+KE L E++P+ GL KVI LDKLRT Y F+ RR+L+S YDLFLADDRILPML K LGKTF KKQPVP+++ RR +L + I RARDS +LV G+ V + NT+MT Q+VENL+A V+ IPRKW NV+AI IK +SVALPV + L Sbjct: 5 ALLSYHEKAHAAGGDLLGSE-ERVHVTIVLKKVPSKASPKPIRLPLAHPLWSL-DCDMCLFMKTEDKPWVKELLMESKPVPGLKKVITLDKLRTSYARFERRRELISTYDLFLADDRILPMLCKTLGKTFFSRKKQPVPVRI-RRGALPQTIQRARDSTYLVLGGGNNVSVCIGNTSMTRKQLVENLLAATNEAVDHIPRKWANVQAIYIKSDSSVALPVLNKL 225
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Match: A0A6G0XX31_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX31_9STRA) HSP 1 Score: 191 bits (485), Expect = 7.100e-51 Identity = 103/236 (43.64%), Postives = 154/236 (65.25%), Query Frame = 2 Query: 62 LDQDQVRRGASALLKHI--KNSAVGKSTLIEDEGEVVLAQISLHKIPGDVSAKPIPIAIPHSLRKQEDCDMCLIVKDNAKAWIKETLENEPMEGLTKVIKLDKLRTQYKDFKDRRQLLSQYDLFLADDRILPMLTKALGKTFLKAKKQPVPIKLERRSSLAKQIARARDSAFLVGSYGDCWVVKLANTAMTEGQVVENLMAGITAVVEKIPRKWKNVKAINIKCSNSVALPVYSNL 763 LD +QVR+ AL + I K S K L+ED +V+ + + +P S KP+PIA+P+++R D ++CL VKD+ K IK L+N+P+ GLTKV+ + KL+ + FKD+R+L + YDLFLADDRILP L LGKTF AKKQP + + + +++ I R + S G C+ VK+A+ M +++EN++ G +VE +P+KWKN+K+INIK S+SVALP+Y++L Sbjct: 5 LDAEQVRKAVVALKQFIQKKKSQNSKQALVEDN-QVIQIIFTRNTVPAKESLKPVPIALPNNIRG--DGEVCLFVKDSDKDRIKAHLKNDPIPGLTKVMPVKKLKKNFSQFKDKRELKAAYDLFLADDRILPYLKSLLGKTFFDAKKQPTTVNVTGKKNISDHIRRVLAGTEMFVSPGPCFNVKIAHDGMDTEKIIENIIEGTKNIVEHVPKKWKNIKSINIKTSDSVALPIYNSL 237
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Match: W7TFQ3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ3_9STRA) HSP 1 Score: 187 bits (476), Expect = 3.720e-49 Identity = 109/254 (42.91%), Postives = 154/254 (60.63%), Query Frame = 2 Query: 62 LDQDQVRRGASALLKH------IKNSAVGKSTLIEDE-GEVVLAQISLHKIPGDVSAKPIPIAIPHSLR-----KQEDCDMCLIVKDNAKAWIKETLENEPMEGLTKVIKLDKLRTQYKDFKDRRQLLSQYDLFLADDRILPMLTKALGKTFLKAKKQPVPIKL--------ERRSSLAKQIARARDSAFLVGSYGDCWVVKLANTAMTEGQVVENLMAGITAVVEKIPRKWKNVKAINIKCSNSVALPVYSNL 763 +D Q R ALL+H + S K L+ E G+ +L QI+L KIP VS KP+P+++PH L ED +CLIVK++ K ++ L M+G+ +V+ L +LRT YK+F++RRQL +DLFL DDRILP+L KALGKTF KK PV +KL + +++ K+I A+ L ++G+C VK+A T+ + V N++AGI A VE P KWKNV AI++K S+SVALP+Y L Sbjct: 54 VDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRL 307
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Match: A0A024G4U6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4U6_9STRA) HSP 1 Score: 181 bits (459), Expect = 4.580e-49 Identity = 99/233 (42.49%), Postives = 146/233 (62.66%), Query Frame = 2 Query: 62 LDQDQVRRGASALLKHIKNSAVG--KSTLIEDEGEVVLAQISLHKIPGDVSAKPIPIAIPHSLRKQEDCDMCLIVKDNAKAWIKETLENEPMEGLTKVIKLDKLRTQYKDFKDRRQLLSQYDLFLADDRILPMLTKALGKTFLKAKKQPVPIKLERRSSLAKQIARARDSAFLVGSYGDCWVVKLANTAMTEGQVVENLMAGITAVVEKIPRKWKNVKAINIKCSNSVALPVY 754 +D+ QVR+ AL +I+ K LIE E + + I KIP S KPIPI +PH++RKQ + MCL+VKD K +K+ L+ +P+EGLTKV+ L KLR + F+DRR L+ YDLFLADDRILP L +GK F++ KKQPVP+++ R ++ + + F+ S G C +++A+ M+ Q+VEN+M G+ I +KW ++AI++K + SVALP+Y Sbjct: 9 MDEAQVRKAVIALQIYIEKQKKDRTKQQLIE-ENQSLSCIIQRKKIPSKASLKPIPIELPHAIRKQPE--MCLLVKDTDKERVKKILKEDPVEGLTKVMTLKKLRKNFTRFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-ANFTQNLRAVEKQTFMFVSCGACMNIRIAHFGMSVDQIVENIMVGMQRCASLIGKKWNGIQAIHLKTNESVALPIY 237
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Match: F0WX21_9STRA (Uncharacterized protein AlNc14C340G10778 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX21_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.380e-47 Identity = 101/248 (40.73%), Postives = 149/248 (60.08%), Query Frame = 2 Query: 62 LDQDQVRRGASALLKHIKNSAV--GKSTLIEDEGEVVLAQISLHKIPGDVSAKPIPIAIPHSLRKQEDCDMCLIVKDNAKAWIKETLENEPMEGLTKVIKLDKLRTQYKDFKDRRQLLSQYDLFLADDRILPMLTKALGKTFLKAKKQPVPIKLERRSSLAKQIARARDSAFLVGSYGDCWVVKLANTAMTEGQVVENLMAGITAVVEKIPRKWKNVKAINIKCSNSVALPVYSN---LGDLPPVPPA 790 +D+ QVR+ AL + + + K LIE E + I K+P S KPIPI +PH +RKQ + MCL+VKD K +K+ L+ +P+EGLTKV+ L KLR + F+DRR L+ YDLFLADDRILP L +GK F++ KKQPVP+++ R + + + F+ S G C V++A+ M+ ++VEN+M G+ I +KW ++AI++K + SVALP+Y + LP +P A Sbjct: 9 MDEAQVRKAVLALQIYTEKQKLEQNKQPLIE-ENVSLSCIIQRKKVPSKASLKPIPIELPHGIRKQSE--MCLLVKDTDKDRVKKILKEDPVEGLTKVMTLKKLRKNFARFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-AKFTQNLRAVEKQTFMFVSCGACMNVRIAHLGMSVDEIVENIMIGMQRCASLIGKKWNGIQAIHLKTNESVALPIYYSPISFTKLPAIPSA 252
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Match: A0A7S0RBE1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RBE1_9CHLO) HSP 1 Score: 176 bits (446), Expect = 2.240e-47 Identity = 99/238 (41.60%), Postives = 148/238 (62.18%), Query Frame = 2 Query: 62 LDQDQVRRGASALLKHIKNSAVGK--STLIEDEGEVVLAQISLHKIPGDVSAKPIPIAIPHSLRKQEDCDMCLIVKDN---AKAWIKETLENEPMEGLTKVIKLDKLRTQYKDFKDRRQLLSQYDLFLADDRILPMLTKALGKTFLKAKKQPVPIKLERRSSLAKQIARARDSAFLVGSYGDCWVVKLANTAMTEGQVVENLMAGITAVVEKIPRKWKNVKAINIKCSNSVALPVYSN 760 L + QVR+ +ALLKHI + GK S L ED+ ++ ++L + P S KPI I IP+ L E ++CL VKD+ KE +++ G+ KVI + KL+ Y F+ +R+L QYDLFLADDRILP L K +GKTF K KKQP+P+ L+++ QI A ++ + S G C V++A ++ E ++V+N+MA + + +PRKWKNV+A+ +K + SVALP+YS+ Sbjct: 7 LSKSQVRKAVAALLKHIAKQSAGKKNSQLFEDD-QIFNLVVALKRTPDQASNKPIRIEIPNPLHSAEGAEVCLFVKDHKGEGHKAAKERIKSMANSGVAKVIGMSKLKANYFTFEAKRKLCDQYDLFLADDRILPSLPKLIGKTFFKKKKQPIPVDLKKKD-WGLQIKMAVNATYTFQSEGSCMNVRVARSSQEEDEIVDNIMAVAEQLGDVVPRKWKNVQALYLKTNESVALPIYSS 242
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Match: A0A7J7QLN2_9CHLO (Ribosomal protein L1 n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A7J7QLN2_9CHLO) HSP 1 Score: 176 bits (445), Expect = 2.480e-47 Identity = 104/247 (42.11%), Postives = 153/247 (61.94%), Query Frame = 2 Query: 59 GLDQDQVRRGASALLKHIKNSAVGKSTLIEDEGEVVLAQISLHKIP-GDVSAKPIPIAIPHSLRKQEDCDMCLIVKDN-------AKAWIKETLENEPMEGLTKVIKLDKLRTQYKDFKDRRQLLSQYDLFLADDRILPMLTKALGKTFLKAKKQPVPIKLERRSSLAKQIARARDSAFLVGSYGDCWVVKLANTAMTEGQVVENLMAGITAVVEKIPRKWKNVKAINIKCSNSVALPVYSNLGDLP 775 GL Q+++ S+LLK + ++ KST + +E EV +SL K P G KPI IAIPH L E ++CL VKD+ AK + + L+N G+ KV+ L KLRT+Y+ + +RQL S YDLFLAD+RI+P L K +GK+F K KKQPVP+ + R + KQ+ A + ++ +G C V++A ++M + Q+V+N MA + VV +P+KW NV+A+ +K S SV+LPVY L + P Sbjct: 5 GLRSQQLQKAVSSLLKFVGDA--DKSTQLLEEDEVFHLVVSLKKAPVGPRKDKPIRIAIPHPLWTAEGAEVCLFVKDHKGEGHKAAKQRLAKLLKNG---GVAKVVGLSKLRTKYESHEAKRQLCSSYDLFLADERIIPSLPKLIGKSFFKRKKQPVPVDM-RAADFPKQVQAALAATYMTPPHGTCVSVRIARSSMEQQQIVDNAMAALRGVVGNVPKKWANVQAVYLKTSESVSLPVYQVLPEEP 245
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Match: I0Z8Y8_COCSC (Ribosomal protein L1 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z8Y8_COCSC) HSP 1 Score: 174 bits (440), Expect = 1.300e-46 Identity = 91/247 (36.84%), Postives = 154/247 (62.35%), Query Frame = 2 Query: 47 TTMVGLDQDQVRRGASALLKHIKNSAVGKSTLIEDEGEVVLAQISLHKIPGDVSA-KPIPIAIPHSLRKQEDCDMCLIVKDN---AKAWIKETLENEPMEGLTKVIKLDKLRTQYKDFKDRRQLLSQYDLFLADDRILPMLTKALGKTFLKAKKQPVPIKLERRSSLAKQIARARDSAFLVGSYGDCWVVKLANTAMTEGQVVENLMAGITAVVEKIPRKWKNVKAINIKCSNSVALPVYSNLGDLP 775 +T GL +DQ+R+ +ALLKH++ + L+E+E + L I+L K P + KP+ + +PHSL + ++CLIVKD+ K+ ++ E + ++KV+ + KLRT+Y+ + +R L + YDLFLAD+R+LP L K LGKTF K KKQP+P+ L + A+Q+ +A ++ ++ + G C +++A ++ + Q EN++ I + IP+KW NV+A+++K + S ALP+Y L + P Sbjct: 2 STTPGLQEDQIRKAVAALLKHVEKQQAKANELLEEEELLYLVIIALKKTPQEARKDKPLRLPLPHSLYDFDGAEVCLIVKDHKGEGHKAAKQRVKEEKLAKVSKVVGVSKLRTKYESAEAKRALCTAYDLFLADERVLPSLPKLLGKTFFKKKKQPIPVDLTGKD-WARQVRKATEATYMHHTGGTCINIRVARSSFSAEQCTENIVEAIKGALPHIPKKWNNVQALHVKTATSAALPIYQTLPEQP 247 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6356.15013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6356.15013.1 >prot_L-elsbetiae_contig6356.15013.1 ID=prot_L-elsbetiae_contig6356.15013.1|Name=mRNA_L-elsbetiae_contig6356.15013.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=374bp MVGLDQDQVRRGASALLKHIKNSAVGKSTLIEDEGEVVLAQISLHKIPGDback to top mRNA from alignment at L-elsbetiae_contig6356:2489..5164+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6356.15013.1 ID=mRNA_L-elsbetiae_contig6356.15013.1|Name=mRNA_L-elsbetiae_contig6356.15013.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2676bp|location=Sequence derived from alignment at L-elsbetiae_contig6356:2489..5164+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6356:2489..5164+ >mRNA_L-elsbetiae_contig6356.15013.1 ID=mRNA_L-elsbetiae_contig6356.15013.1|Name=mRNA_L-elsbetiae_contig6356.15013.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2244bp|location=Sequence derived from alignment at L-elsbetiae_contig6356:2489..5164+ (Laminarionema elsbetiae ELsaHSoW15)back to top |