mRNA_L-elsbetiae_contig6352.15010.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6352.15010.1
Unique NamemRNA_L-elsbetiae_contig6352.15010.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Match: D8LRP8_ECTSI (Rab GDP dissociation inhibitor n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP8_ECTSI)

HSP 1 Score: 917 bits (2371), Expect = 0.000e+0
Identity = 453/476 (95.17%), Postives = 460/476 (96.64%), Query Frame = 1 
Query:    1 DGGDAPAPRPDWLPEGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTRYLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLATYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVSNTLAPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKLDLSIDPEVEQDEG 1428
            DGG+ PAPRPDWLP+GCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPA ELGHPTRDYNVDLIPKFLMANG+LVKMLLMTKVTRYLEFKTVDGSYVVKGGK+NKVPATPDEALRTSLMGIFEKRRFRNFLQYLA YDE +PDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYV SLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQ        VNR NDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLG VMERFDDVSNTL PVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQK+DLSIDPEVEQ+EG
Sbjct:   10 DGGEVPAPRPDWLPDGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKGGKINKVPATPDEALRTSLMGIFEKRRFRNFLQYLAGYDEQQPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVRSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQ--------VNRHNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGPVMERFDDVSNTLTPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKMDLSIDPEVEQEEG 477
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BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Match: A0A835ZGN9_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN9_9STRA)

HSP 1 Score: 667 bits (1722), Expect = 2.200e-234
Identity = 328/470 (69.79%), Postives = 378/470 (80.43%), Query Frame = 1 
Query:   10 DAPAPRPDWLPEGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTRYLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLATYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVSNTLAPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKLDLSIDPEVEQ 1419
            +APA RPDWLP GCEMLADG YDAI+MGTGLKEA++SGLLST GMKVLHVDRN++YGG+CASLNLTNLY KFR G  P   LGHPTRDYNVDLIPKF+MA G+LVKMLL+TKVTRYLEFK VDGSYV K GK+ KVPATPDEALR+SLMG+FEKRRFR FL +++ Y+EDKP T++G DL+ ++M Q+YE +GLDENTQSF GHAMALQRD+TYL+ PAL+ +KSIQLY +SLERYGKSPYIYPMYGLGGLPEGFSRLCA+HGGTFMLQCPVEE+LFD  G AWGIKAT+DGVPQVAKA +++GDPSYFP   V+  G V RSICI+DHP   T DAESTQIIIPGRQ        V R  DIYVCMVSFSH VA+ GKY+AIASTTVET+DP++EL                      PV  G AD C++S SYDATSHFETT+ D+  LYER+TG KL L I+ +  +
Sbjct:    7 EAPA-RPDWLPAGCEMLADGAYDAIIMGTGLKEAVISGLLSTKGMKVLHVDRNSWYGGDCASLNLTNLYGKFRAGADPPPSLGHPTRDYNVDLIPKFIMACGNLVKMLLLTKVTRYLEFKNVDGSYVYKQGKILKVPATPDEALRSSLMGLFEKRRFRKFLIWISNYEEDKPATYEGLDLKVLSMRQVYEHYGLDENTQSFIGHAMALQRDETYLNLPALDAVKSIQLYCYSLERYGKSPYIYPMYGLGGLPEGFSRLCAVHGGTFMLQCPVEEILFDGEGKAWGIKATIDGVPQVAKAPIVVGDPSYFPKEKVRCYGRVVRSICILDHPIPNTADAESTQIIIPGRQ--------VGRTEDIYVCMVSFSHNVAAAGKYIAIASTTVETADPISELXXXXXXXXXXXXXXXXXXXXXEPVGSGAADSCYVSASYDATSHFETTSQDILDLYERITGSKLSLEINADTTE 467
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BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Match: F0W0X7_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0X7_9STRA)

HSP 1 Score: 613 bits (1581), Expect = 3.910e-213
Identity = 301/461 (65.29%), Postives = 361/461 (78.31%), Query Frame = 1 
Query:   31 DWLPEGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTRYLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLATYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVSNTLAPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKLDLSIDPEV 1413
            DWLPEGCE LADGEYDAIV+GTGLKE I+SGLL+  G KVLH+DRN+YYGG+CASLNL NLY K++PG  P +ELG  +RDYN+DLIPKF+MA G LVKMLL TKVTRYLEFK VDGSYVVK GK  KVPAT +EALR+SLMGIFEKR+FR  + Y+  Y+ED P TF+G DL++  M Q++E FG+D NTQSF GHAMAL  DD YL KPA+ETIK+I+LY +SLERYGKSPY+YP+YGLGGLPEGFSRLCAIHGGTFML   V+E+L+DD+G AWGIK   +    VAK  +LIGDPSYF S  +  TG   RSI I+DHP   TNDAES QIIIP  QA        NR+NDIYVCMVS++H +A+ G YVAI ST  ET+DPL+E+AP   LLG   +RFD VS+   P+ DG+ D C+IS SYD TSHFETT+ DV S+Y+R+TG++LD+SI+ + 
Sbjct:   10 DWLPEGCESLADGEYDAIVLGTGLKECILSGLLAVNGKKVLHLDRNSYYGGDCASLNLANLYEKYKPGTKPPSELGS-SRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVVKNGKSYKVPATGEEALRSSLMGIFEKRKFRKLILYIYNYEEDNPKTFEGLDLKKQPMSQVFEKFGVDANTQSFMGHAMALWTDDRYLEKPAIETIKAIKLYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILYDDTGRAWGIKCDNE----VAKGKLLIGDPSYFSSEKMTLTGKAVRSIFILDHPIPNTNDAESLQIIIPAAQA--------NRQNDIYVCMVSYAHMIAAKGMYVAIVSTVAETADPLSEIAPGVNLLGPFFDRFDSVSDMYEPIHDGSTDNCYISASYDPTSHFETTSEDVLSMYKRITGEELDMSINADT 457
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BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Match: A0A8K1CTA6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTA6_PYTOL)

HSP 1 Score: 603 bits (1554), Expect = 4.650e-209
Identity = 296/459 (64.49%), Postives = 360/459 (78.43%), Query Frame = 1 
Query:   34 WLPEGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTRYLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLATYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVSNTLAPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKLDLSIDPE 1410
            WLP+G E LADGEYDAIV+GTGLKE I+SGLL+  G KVLH+DRN YYGGECASLNLTNLYNKF+P Q P ++LG   RDYN+DLIPKF+MA G LVKMLL TKVTRYLEFK VDGSYVVKGGK  KVPATP+EAL++SLMGIFEKR+FR  + Y+  Y+E+ P T +G DL    M +L+E FG+D NTQSF GHAMAL RDD+Y+ +PA+ET+++I+LY +SLERYGKSPY+YP+YGLGGLPEGFSRLCAIHGGTFML   V+E+L DDSG AWG++A  +    VAK  ++IGDPSYF S  ++P G   RSI I+DHP   TN++ES QIIIP  QA        NRRNDIYVC+VS +HCVA+ G YVAI ST VET DPL+EL P   LLG  ++RFD V++   P+ DG+ D CFIS+SYD TSHFETT+ DV  LY+R+TG+ LD++I+ +
Sbjct:   11 WLPQGTEALADGEYDAIVLGTGLKECILSGLLAVNGKKVLHMDRNPYYGGECASLNLTNLYNKFKPDQEPRSDLGS-NRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVVKGGKTYKVPATPEEALKSSLMGIFEKRKFRKLILYIYNYEEEDPKTHEGMDLFTQPMSELFEKFGVDANTQSFMGHAMALMRDDSYISRPAIETVRAIKLYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILKDDSGRAWGVRAGNE----VAKGKLIIGDPSYFSSDKLRPNGKAVRSIFILDHPVPNTNNSESLQIIIPAAQA--------NRRNDIYVCVVSHAHCVAAEGMYVAIVSTVVETEDPLSELEPGVVLLGSYIDRFDSVTDMYEPIGDGSDDNCFISKSYDPTSHFETTSDDVLDLYKRITGEALDMNINAD 456
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BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Match: A0A024FZZ5_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZZ5_9STRA)

HSP 1 Score: 607 bits (1566), Expect = 1.390e-208
Identity = 298/461 (64.64%), Postives = 362/461 (78.52%), Query Frame = 1 
Query:   31 DWLPEGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTRYLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLATYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVSNTLAPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKLDLSIDPEV 1413
            DWLP+GCE LADGEYDAIV+GTGLKE I+SGLL+  G KVLH+DRN+YYGG+CASLNL NLY K++PG  P +ELG  +RDYN+DLIPKF+MA G LVKMLL TKVTRYLEFK VDGSYVVK GK  KVPAT +EALR+SLMGIFEKR+FR  + Y+  Y+ED P TF+G DL++  M Q+YE FG+D NTQSF GHAMAL  DD YL KPA+ETI++I+LY +SLERYGKSPY+YP+YGLGGLPEGFSRLCAIHGGTFML   V+E+L+D +G AWGIK   +    VAK  +LIGDPSYF +  +  TG   RSI I+DHP   TNDAES QIIIP  QA        NR+NDIYVCMVS++H +A+ G YVAI ST  ET+DPL+E+AP   LLG  ++RFD VS+   P++DG+ D C+IS SYD TSHFETT+ DV S+Y+R+TG++LD+SI+ + 
Sbjct:   10 DWLPDGCESLADGEYDAIVLGTGLKECILSGLLAVNGKKVLHLDRNSYYGGDCASLNLANLYEKYKPGTKPPSELGS-SRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVVKNGKSYKVPATGEEALRSSLMGIFEKRKFRKLILYIYNYEEDDPKTFEGLDLKKQPMSQVYEKFGVDANTQSFMGHAMALWTDDRYLGKPAIETIRAIKLYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILYDATGRAWGIKCGNE----VAKGKLLIGDPSYFDNEKMTLTGKAVRSIFILDHPIPNTNDAESLQIIIPAAQA--------NRQNDIYVCMVSYAHMIAAKGMYVAIVSTVAETADPLSEIAPGVSLLGPFLDRFDSVSDMYEPIQDGSNDNCYISASYDPTSHFETTSEDVLSMYKRITGEELDMSINADT 457
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BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Match: T0Q659_SAPDV (Rab GDP dissociation inhibitor n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q659_SAPDV)

HSP 1 Score: 597 bits (1538), Expect = 1.280e-206
Identity = 297/459 (64.71%), Postives = 356/459 (77.56%), Query Frame = 1 
Query:   34 WLPEGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTRYLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLATYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVSNTLAPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKLDLSIDPE 1410
            WLP G E LADGEYDAIV+GTGLKE I+SGLL+T G KVLH+DRN+YYGG+CASLNLTNLY KFR G  P   LG   RDYN+DLIPKF+MA G LVKMLL TKVTRYL+FK VDGSYV KGGK+ KVPAT +EAL++SLMGIFEKRRFR+ L Y+  Y+ED P TF G DL+   M  LY  FG+D NTQSFTGH MAL RDD YL +PA+E +++I++Y +SLERYGKSPY+YP+YGLGGLPEGFSRLCAIHGGTFML   V+EVL +D G AWGI+   +    VAK  ++IGDPSYFP+   + TG V RSI I+ HP N T ++ES QIIIP  QA        NR +DIYVC+VSF+HCVA+   Y+AI STTVETS+PLAEL     LLG+ ++RFD VS+ L P+ DG AD CFIS SYDATSHFETT+ DV SLY+R+TG++LD++I+ +
Sbjct:   12 WLPAGTEALADGEYDAIVLGTGLKECILSGLLATKGQKVLHIDRNDYYGGDCASLNLTNLYGKFRNGAEPLTGLGS-NRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLDFKNVDGSYVYKGGKIYKVPATGEEALKSSLMGIFEKRRFRSMLMYIYNYEEDDPSTFDGLDLKTQPMSDLYAKFGVDANTQSFTGHTMALMRDDEYLRQPAIEAVRAIKMYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLHRSVDEVLIED-GKAWGIRCGNE----VAKGKIIIGDPSYFPAEKTRTTGQVVRSIFILRHPINNTANSESCQIIIPAAQA--------NRHSDIYVCVVSFAHCVAAKDTYIAIVSTTVETSNPLAELELGISLLGEYVDRFDSVSDQLEPIGDGKADNCFISASYDATSHFETTSDDVLSLYKRITGEELDMNINAD 456
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BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Match: K3X8R5_GLOUD (Rab GDP dissociation inhibitor n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8R5_GLOUD)

HSP 1 Score: 593 bits (1529), Expect = 3.050e-205
Identity = 292/465 (62.80%), Postives = 357/465 (76.77%), Query Frame = 1 
Query:   34 WLPEGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTRYLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLATYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVSNTLAPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKLDLSIDP---EVEQ 1419
            WLP G E LADGEYDAIV+GTGLKE I+SGLL+  G KVLH+DRN YYGGECASLNLTNLY KF+PGQPP  +LG   RDYN+DL+PKF+MA G LVKMLL TKVTRYLEFK VDGSYV KGGK  KVPAT +EALR+SLMG+FEKR+FR  + Y+  Y+ED P T++G DL +  M +L+E FG+D NTQSF GHAMAL RD++Y+ +PA+ET+++I+LY +SLERYGKSPYIYP+YGLGGLPEGFSRLCAI+GGTFML   V+E+LFD  G AWGI+A  +    VAK  ++IGDPSYFP   ++  G   RSI I++HP   TNDAES QIIIP  QA         R NDIYVC+VS +HCV++ G Y+AI ST VET DPL ELAP   LLG  ++RFD +++   P+ +G  D CFIS+SYD TSHFETT+ DV  LY+R+TG+ LD++I+    EV+Q
Sbjct:   12 WLPAGTEALADGEYDAIVLGTGLKECILSGLLAVNGKKVLHLDRNAYYGGECASLNLTNLYQKFKPGQPPRDDLG-ANRDYNIDLVPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVFKGGKTYKVPATGEEALRSSLMGMFEKRKFRKLIMYIYNYEEDDPKTYEGMDLFKQPMSELFEKFGVDANTQSFMGHAMALMRDESYISRPAIETVRAIKLYAYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLNRGVDEILFDGEGKAWGIRAGNE----VAKGKLIIGDPSYFPQEKLRKDGKAVRSIFILNHPVPNTNDAESLQIIIPASQAQ--------RHNDIYVCVVSSAHCVSAKGMYIAIVSTVVETEDPLLELAPGVNLLGPYLDRFDAITDMYEPIANGLQDNCFISKSYDPTSHFETTSDDVLDLYQRITGEALDMNINADSTEVDQ 463
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BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Match: W4GVI1_9STRA (Rab GDP dissociation inhibitor n=6 Tax=Aphanomyces TaxID=100860 RepID=W4GVI1_9STRA)

HSP 1 Score: 583 bits (1504), Expect = 1.800e-201
Identity = 290/464 (62.50%), Postives = 359/464 (77.37%), Query Frame = 1 
Query:   31 DWLPEGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQP-PAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTRYLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLATYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVSNTLAPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKLDLSIDPEVEQ 1419
            DWLP G E LADGEY+AIV+GTGLKE I+SGL++T G+KVLH+DRNNYYGG+CASLNL+NLY KFR     P   LG   RDYN+DLIPKF+MA G LVK+LL TKVTRYLEFK VDGSYV KG ++ KVPAT +EAL +SLMGIFEKRRFR  + ++  Y+E+ PDT +G DL +  M  +Y  FG+D NTQSFTGHAMAL RDD Y+++PA+ET++++++Y +SLERYGKSPYIYP+YGLGGLPEGFSRLCAIHGGTFML   V+EVLF D G AWGI++  +    VAK  ++IGDPSYFP    +  G V RSI I+ HP   TN++ES QIIIP  QA        NRRND+YVC+VSF+HCVA+   Y+AI STTVETS PLAEL     LLG+ ++RFD+VS+ L PV +GT D C+IS SYDATSHFETT+ DV SLY+R+TG++LD++I+ +  +
Sbjct:   10 DWLPAGTEALADGEYEAIVLGTGLKECILSGLMATKGLKVLHLDRNNYYGGDCASLNLSNLYTKFRGEHAEPLTGLGS-NRDYNIDLIPKFIMACGKLVKILLHTKVTRYLEFKNVDGSYVYKGSRIYKVPATGEEALSSSLMGIFEKRRFRGLIMFVYNYEEENPDTHQGLDLFKQPMSDVYAKFGVDANTQSFTGHAMALMRDDNYINRPAIETVRALKMYSYSLERYGKSPYIYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEVLFKD-GKAWGIRSGNE----VAKGKLIIGDPSYFPKEKTRSVGKVVRSIFILRHPIANTNNSESCQIIIPAAQA--------NRRNDVYVCVVSFAHCVAAKDTYIAIVSTTVETSSPLAELEIGVSLLGEYVDRFDEVSDQLEPVGNGTVDNCYISSSYDATSHFETTSDDVLSLYQRITGEQLDMTINADTTE 459
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BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Match: A0A7S2JVQ7_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVQ7_9STRA)

HSP 1 Score: 579 bits (1493), Expect = 8.920e-200
Identity = 290/470 (61.70%), Postives = 355/470 (75.53%), Query Frame = 1 
Query:   16 PAPRPDWLPEGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTRYLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLATYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVSNTLAPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKLDLSIDPE-VEQD 1422
            P PRP+WLP   E+LADGEYDAIVMGTGLKE I+SGLLST GMK+LH+DRNNYYG +CASLNLTNLY KF+ GQ P  E     R+YNVDLIPKF+MA G+L KMLL TKVTRYLEFK++DGSYV  G KV KVPATP+EAL +SLMG+FEKRRFR FL Y+  Y+ DKP+T +G DL +MTM QLY  FGL E T  F  HAM LQ DD +L +PAL+T+ ++Q Y +SL RYG SPYIYPMYGLGGLPEGFSRLCAIHGGTFML   V+E+L ++SG A+GI+   +    +AKA ++IGDPSYFP   V+PTG+V R IC ++HP   TN++ES QIIIPG Q        VNR+NDI+VC VS +HCVA+ G Y+AI ST +E   P  E+ P   LLG +M+RF  V+ T  PV+DG +++CFIS+S+D TSHFE    D+ SLYER+TG KLD++I+ + VE D
Sbjct:    8 PDPRPEWLPADKEILADGEYDAIVMGTGLKECILSGLLSTQGMKILHIDRNNYYGADCASLNLTNLYEKFQAGQVP--EYLGSNREYNVDLIPKFIMACGNLTKMLLHTKVTRYLEFKSIDGSYVYCGNKVLKVPATPNEALSSSLMGLFEKRRFRKFLIYIDQYEADKPETHQGLDLTQMTMRQLYVHFGLVEGTHEFISHAMCLQLDDVHLEQPALDTVTTLQTYCYSLARYGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLNRDVDEILMNESGEAYGIRCGNE----MAKAKLVIGDPSYFPREQVRPTGLVVRCICFLNHPIPNTNNSESAQIIIPGPQ--------VNRKNDIFVCCVSSAHCVANRGVYIAIVSTLMEGGMPEEEIKPGLALLGSIMQRFTSVATTYEPVDDGKSNKCFISKSFDGTSHFENDVEDLLSLYERITGSKLDMTINADSVEAD 463
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BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Match: A0A2D4BVL6_PYTIN (Rab GDP dissociation inhibitor n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVL6_PYTIN)

HSP 1 Score: 583 bits (1502), Expect = 2.420e-199
Identity = 296/469 (63.11%), Postives = 358/469 (76.33%), Query Frame = 1 
Query:   25 RPD--WLPEGCEMLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTRYLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLATYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVSNTLAPVEDGTAD-----RCFISESYDATSHFETTAADVQSLYERVTGQKLDLSIDPE 1410
            +PD  WLP+G E LADGEYDAIV+GTGLKE I+SGLL+  G KVLH+DRN YYGG+CASLNLTNLY KF+PG+ P++ LG   RDYN+DLIPKF+MA G LVKMLL TKVTRYLEFK VDGSYV K GK  KVPAT +EAL++SLMGIFEKR+FR  L Y+  Y+E+ P T +G DL    M +LYE FG+D NTQSF GHAMAL RD++Y+ +PA+ET+++I+LY +SLERYGKSPYIYP+YGLGGLPEGFSRLCAIHGGTFML   V+E+LFDDSG AWGI+A  +    VAKA +LIGDPSYFPS  ++  G   RSI I+DHP   TND+ES QIIIP  QA        NR NDIYVC+VS +HCVA+ G YVAI ST  ETSDPL+EL    +LLG  ++RFD +S+   PV+DG+ D     R     SYD TSHFETT+ DV  LY+R+TG+ LD++I+ +
Sbjct:    6 KPDFAWLPKGTEALADGEYDAIVLGTGLKECILSGLLAVNGKKVLHLDRNPYYGGDCASLNLTNLYGKFKPGEEPSSALGS-NRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVYKSGKTYKVPATGEEALKSSLMGIFEKRKFRKLLMYIYNYEEEDPKTHEGLDLFTQPMSKLYEYFGVDANTQSFMGHAMALMRDESYISRPAIETVRAIKLYAYSLERYGKSPYIYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILFDDSGRAWGIRAGNE----VAKAKLLIGDPSYFPSSKLRKGGKTVRSIFILDHPVPNTNDSESLQIIIPAAQA--------NRENDIYVCVVSHAHCVAAKGMYVAIVSTMAETSDPLSELDVGVKLLGPYLDRFDSISDMYEPVDDGSRDNXGRRREAAGPSYDPTSHFETTSDDVLDLYKRITGEALDMNINAD 461
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6352.15010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRP8_ECTSI0.000e+095.17Rab GDP dissociation inhibitor n=2 Tax=Ectocarpus ... [more]
A0A835ZGN9_9STRA2.200e-23469.79Rab GDP dissociation inhibitor n=1 Tax=Tribonema m... [more]
F0W0X7_9STRA3.910e-21365.29Rab GDP dissociation inhibitor n=1 Tax=Albugo laib... [more]
A0A8K1CTA6_PYTOL4.650e-20964.49Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024FZZ5_9STRA1.390e-20864.64Rab GDP dissociation inhibitor n=1 Tax=Albugo cand... [more]
T0Q659_SAPDV1.280e-20664.71Rab GDP dissociation inhibitor n=3 Tax=Saprolegnia... [more]
K3X8R5_GLOUD3.050e-20562.80Rab GDP dissociation inhibitor n=2 Tax=Pythiaceae ... [more]
W4GVI1_9STRA1.800e-20162.50Rab GDP dissociation inhibitor n=6 Tax=Aphanomyces... [more]
A0A7S2JVQ7_9STRA8.920e-20061.70Rab GDP dissociation inhibitor n=1 Tax=Leptocylind... [more]
A0A2D4BVL6_PYTIN2.420e-19963.11Rab GDP dissociation inhibitor n=1 Tax=Pythium ins... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6352contigL-elsbetiae_contig6352:1262..7921 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score882.9
Seed ortholog evalue6.6e-254
Seed eggNOG ortholog2880.D8LRP8
Preferred nameGDI2
KEGG koko:K03662,ko:K17255
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko05110,ko05120,ko05152,ko05161,ko05323,map00190,map01100,map04142,map04145,map05110,map05120,map05152,map05161,map05323
KEGG ModuleM00160
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001505,GO:0001558,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005092,GO:0005093,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005794,GO:0005829,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006955,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007399,GO:0008021,GO:0008047,GO:0008104,GO:0008150,GO:0008361,GO:0009966,GO:0009987,GO:0010035,GO:0010038,GO:0010646,GO:0010720,GO:0010721,GO:0010769,GO:0010770,GO:0010771,GO:0010975,GO:0010976,GO:0010977,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0017016,GO:0017137,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023061,GO:0030133,GO:0030141,GO:0030154,GO:0030234,GO:0030307,GO:0030424,GO:0030496,GO:0030516,GO:0030695,GO:0031267,GO:0031344,GO:0031345,GO:0031346,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032386,GO:0032387,GO:0032482,GO:0032501,GO:0032502,GO:0032535,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033157,GO:0034613,GO:0034774,GO:0035556,GO:0035578,GO:0036230,GO:0036477,GO:0040008,GO:0042119,GO:0042221,GO:0042582,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043085,GO:0043087,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043547,GO:0044093,GO:0044297,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045773,GO:0045927,GO:0046903,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050769,GO:0050770,GO:0050771,GO:0050772,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051051,GO:0051056,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051223,GO:0051224,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051336,GO:0051345,GO:0051592,GO:0051641,GO:0051649,GO:0051716,GO:0051960,GO:0051961,GO:0051962,GO:0060205,GO:0060284,GO:0060341,GO:0060589,GO:0061387,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0090066,GO:0090087,GO:0090313,GO:0090315,GO:0090317,GO:0097458,GO:0097708,GO:0098772,GO:0098793,GO:0098916,GO:0099503,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120035,GO:1902531,GO:1903533,GO:1903827,GO:1903828,GO:1904950,GO:1905475,GO:1905476,GO:2000026
EggNOG free text desc.Rab GDP-dissociation inhibitor activity
EggNOG OGsCOG5044@1,KOG1439@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04147
Ec32 ortholog descriptionrab GDP dissociation inhibitor protein
Ec32 orthologEc-12_000600.1
Exons11
Model size2059
Cds size1377
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816701.151653-UTR-L-elsbetiae_contig6352:1261..13151622816701.151653-UTR-L-elsbetiae_contig6352:1261..1315Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6352 1262..1315 +
1691683750.4791384-UTR-L-elsbetiae_contig6352:1261..13151691683750.4791384-UTR-L-elsbetiae_contig6352:1261..1315Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6352 1262..1315 +
1622816701.2994895-UTR-L-elsbetiae_contig6352:7293..79211622816701.2994895-UTR-L-elsbetiae_contig6352:7293..7921Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6352 7294..7921 +
1691683750.5895667-UTR-L-elsbetiae_contig6352:7293..79211691683750.5895667-UTR-L-elsbetiae_contig6352:7293..7921Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6352 7294..7921 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816701.1641865-CDS-L-elsbetiae_contig6352:1315..14081622816701.1641865-CDS-L-elsbetiae_contig6352:1315..1408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 1316..1408 +
1691683750.4929419-CDS-L-elsbetiae_contig6352:1315..14081691683750.4929419-CDS-L-elsbetiae_contig6352:1315..1408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 1316..1408 +
1622816701.1795404-CDS-L-elsbetiae_contig6352:1931..21291622816701.1795404-CDS-L-elsbetiae_contig6352:1931..2129Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 1932..2129 +
1691683750.504697-CDS-L-elsbetiae_contig6352:1931..21291691683750.504697-CDS-L-elsbetiae_contig6352:1931..2129Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 1932..2129 +
1622816701.1923115-CDS-L-elsbetiae_contig6352:2509..25781622816701.1923115-CDS-L-elsbetiae_contig6352:2509..2578Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 2510..2578 +
1691683750.5135524-CDS-L-elsbetiae_contig6352:2509..25781691683750.5135524-CDS-L-elsbetiae_contig6352:2509..2578Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 2510..2578 +
1622816701.2058222-CDS-L-elsbetiae_contig6352:2831..29551622816701.2058222-CDS-L-elsbetiae_contig6352:2831..2955Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 2832..2955 +
1691683750.5221303-CDS-L-elsbetiae_contig6352:2831..29551691683750.5221303-CDS-L-elsbetiae_contig6352:2831..2955Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 2832..2955 +
1622816701.2167387-CDS-L-elsbetiae_contig6352:3493..36141622816701.2167387-CDS-L-elsbetiae_contig6352:3493..3614Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 3494..3614 +
1691683750.5308182-CDS-L-elsbetiae_contig6352:3493..36141691683750.5308182-CDS-L-elsbetiae_contig6352:3493..3614Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 3494..3614 +
1622816701.228514-CDS-L-elsbetiae_contig6352:4018..41901622816701.228514-CDS-L-elsbetiae_contig6352:4018..4190Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 4019..4190 +
1691683750.539341-CDS-L-elsbetiae_contig6352:4018..41901691683750.539341-CDS-L-elsbetiae_contig6352:4018..4190Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 4019..4190 +
1622816701.2393165-CDS-L-elsbetiae_contig6352:4467..45301622816701.2393165-CDS-L-elsbetiae_contig6352:4467..4530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 4468..4530 +
1691683750.5478327-CDS-L-elsbetiae_contig6352:4467..45301691683750.5478327-CDS-L-elsbetiae_contig6352:4467..4530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 4468..4530 +
1622816701.249735-CDS-L-elsbetiae_contig6352:5251..54341622816701.249735-CDS-L-elsbetiae_contig6352:5251..5434Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 5252..5434 +
1691683750.5558603-CDS-L-elsbetiae_contig6352:5251..54341691683750.5558603-CDS-L-elsbetiae_contig6352:5251..5434Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 5252..5434 +
1622816701.2632906-CDS-L-elsbetiae_contig6352:5874..60351622816701.2632906-CDS-L-elsbetiae_contig6352:5874..6035Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 5875..6035 +
1691683750.564172-CDS-L-elsbetiae_contig6352:5874..60351691683750.564172-CDS-L-elsbetiae_contig6352:5874..6035Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 5875..6035 +
1622816701.2726734-CDS-L-elsbetiae_contig6352:6551..66381622816701.2726734-CDS-L-elsbetiae_contig6352:6551..6638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 6552..6638 +
1691683750.5725389-CDS-L-elsbetiae_contig6352:6551..66381691683750.5725389-CDS-L-elsbetiae_contig6352:6551..6638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 6552..6638 +
1622816701.2852623-CDS-L-elsbetiae_contig6352:7187..72931622816701.2852623-CDS-L-elsbetiae_contig6352:7187..7293Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 7188..7293 +
1691683750.5809844-CDS-L-elsbetiae_contig6352:7187..72931691683750.5809844-CDS-L-elsbetiae_contig6352:7187..7293Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6352 7188..7293 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6352.15010.1prot_L-elsbetiae_contig6352.15010.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6352 1316..7293 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6352.15010.1

>prot_L-elsbetiae_contig6352.15010.1 ID=prot_L-elsbetiae_contig6352.15010.1|Name=mRNA_L-elsbetiae_contig6352.15010.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=459bp
MLADGEYDAIVMGTGLKEAIMSGLLSTLGMKVLHVDRNNYYGGECASLNL
TNLYNKFRPGQPPAAELGHPTRDYNVDLIPKFLMANGDLVKMLLMTKVTR
YLEFKTVDGSYVVKGGKVNKVPATPDEALRTSLMGIFEKRRFRNFLQYLA
TYDEDKPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYL
HKPALETIKSIQLYVHSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGT
FMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVK
PTGMVARSICIMDHPFNGTNDAESTQIIIPGRQASPSPSARVNRRNDIYV
CMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGDVMERFDDVS
NTLAPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKLDLSID
PEVEQDEG*
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mRNA from alignment at L-elsbetiae_contig6352:1262..7921+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6352.15010.1 ID=mRNA_L-elsbetiae_contig6352.15010.1|Name=mRNA_L-elsbetiae_contig6352.15010.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6660bp|location=Sequence derived from alignment at L-elsbetiae_contig6352:1262..7921+ (Laminarionema elsbetiae ELsaHSoW15)
GATGGAGGTGACGCACCGGCGCCCAGACCGGACTGGCTACCCGAGGGTTG
CGAGATGCTCGCGGATGGAGAGTACGATGCTATCGTTATGGGCACCGGGC
TCAAGGAGGCCATCATGTCCGGACTCTTGTCCACACTCGGAATGAAGGTA
CTGCTTGAACGCTACTACTACTGCTGTACACGGCATAGTTGTAAGGCCGG
CCGTGCAGCGACACGGTTTCGATGTTTGCAGGCCTGGCTTGGCGTGGTTT
AGCTTGGCTTGGCTTGGTACAGAAATGCGGCAGGATTTTGCGTGTCTCGC
TTGGTTTTTCCTATTTCAAGGCAGAATATAGGGTACAGCTTGTAATATAG
GAGTAGGAGTGTAAGTTGGCCGCACTTGTCGTACGGCAGAGCAAGGACGT
GTGCACGTGCCGCCAGGCCAGAATGACAACACCCCTTAGGGAAAGGCATG
GTGGGCCACTCTACTCAGGTGTAACCGTATTCAAGGCTTGACAAAAAGTG
GCAAAAAACGTTTTTTTTGTTGCCGCTGCAGTCCTTTTTGTCTGGCCCTC
GTACAATCCAGCACAGGTGTTGACCAGAACTTCAGCCGATGATGTGATGC
CACCCCCACAAGTCCAGCTTTCCCTCTCTTCTCTTCCCCCTCTCCTCTGT
CCTGCTCTCCCCTGAGTAAGGTCCTACACGTGGACCGCAACAACTACTAC
GGAGGAGAGTGCGCGTCGCTCAACCTGACCAACCTGTACAACAAGTTCAG
GCCAGGTCAGCCCCCGGCCGCTGAACTGGGCCACCCTACGCGCGACTACA
ACGTCGACCTCATCCCGAAGTTCCTCATGGCCAACGGTGACCTGGTCAAG
ATGCTACTCATGACCAAGGTAAATTTAAGGCGAATTACCCTGCTGTTTCA
TTTTTGTTTTATTTGTAACTAATGCCCAAGAGTGGCCACCGTTTTTTGCT
GGTTTTGGTTGTGCGATATTGCCATACTTGCTTTACGTTCGCTCCTTGCA
TGTGTTTATGTGTCTTTTATCTCATACTCGTGTATTCTACATTAGCATAC
CACGAAGCCCCCTTATGTAGATTGATGCACAGAGTACAAGAGTCAGTGCC
GTGAGGCTCGAGGCGGTTGTGTGATGCTTAATGACTCGTGCCCGGTTTTG
GTGTGTGAGTTTTTATGTGTGAAGCCATGAGTCACAAATATTGTCTTGAC
CATTCCTCAACTGATTCGCAATTGAACGATGATGATGTGGCGTCGCAGGT
GACGAGATACCTTGAGTTCAAGACCGTCGACGGCAGCTACGTGGTGAAGG
GGGGCAAGGTTAACAAGGTGAGAGGAGGTGCAAACTGACAGGGTACCCGG
GGCCTTGCTGGCACTTTCCACGACCCCCAAGACCATCCGTCATCCGGAAC
TAGTAGGTCTAAATAGCCTTGAACTATCCCATCCCATCTCTACTCCTAGA
TGTTCTGATTGGTGTCTCGTGTTTCTCCAGTTGTACCAGTGTTTGGTGAT
GTCGTCACGGCCGGATTCATTGTGACGGCACTGTTTTCTGTGTTGTGGCG
GGACTGGACGGGACTGTCAGGTACCGGCAACGCCAGATGAGGCTTTGCGC
ACGTCCCTGATGGGCATCTTCGAGAAGCGCCGCTTCCGTAACTTCCTGCA
GTACCTGGCTACCTACGACGAGGACAAACCCGACACGTTCAAAGGTATGT
AAATCCAAAAGCTGCGGGGTAAGAGGGTAAAGATGTCTATCGTATCGGGT
TAGGGTTACGAGGCTGTTGAAAATAGTGGTGTCAGTGTTGTTGCCCGTGA
TATCGATAGTGTCAAGAGGTATTTTCCATGATTCTACGGTTGTCTGCAAC
GGTAGATATTAGGAGGCAGCAGGATTTGGAGGATGATATGTCATGGCAAA
GAGCAACGCGAGCCAGGTTGCAAGCAAAGTTTCAGCTAGCCTCGGTGTTA
TCTCACACCGAATTACTTTTCCCCGTCATGCCACTACTGCCTCCGCGTCC
GTCCCTGTCATCGTATGTTTTATGGTACGTGTTGTACTTCCGAAGTAGGT
GTGTAGTGTACATCCGTATGGCATTGGCAGGTCACCGTCGGTCTTGTTTG
AGGCACGGCATGGGCGTGGCGCGAGCGCGATCGATGGGTGTTCTTGATGT
CTAACCTCACCCTACCCACAGCTGACGTCATGCCATGTCATGTCTTGTGC
TATCTGTCGTGTCTTGTCATGTGCCGCCCCAGGACGAGACCTTCGCCGGA
TGACAATGCTCCAGCTCTACGAGGACTTTGGCCTGGATGAGAACACTCAG
TCCTTCACCGGACACGCTATGGCTCTGCAGAGGGACGACACCTACCTGCA
CAAGTAAGAGTACCCTCGATGCATTCGTTCCCTGTGCACCTCCGCCGTAT
GCCCCCGCACCCCAATATTTTCCTATTGTGCCTACATCTTGAGTATGCCA
CCGTTACAGGATGGTTGCTCGCTCCGTGTGGTAGTTTGCATGCAAATGGC
CGCCGTGTAATGGGACTAAATGCTGCTACATGTACATGAATATCAAGGGC
ATTTAATACCTCTCTATTTTGTAAAAGTATTGCAGACGGATCCTCCTTGG
CCGATCATGCTACTCATATCTGCATTCATTGTCGAAGTGGTTGTGGATCT
GATACCTTCGTGCGTATGTGCCCGTTTATATTTTGTTTTTAGGTTAAAGG
TGATGTATGATGGTGTTGCTGCTTTACTTGTTTCGTGCTTCCTCTTCGTG
CTTGCAGGCCGGCGCTGGAGACGATCAAGAGCATCCAGCTTTACGTTCAC
TCCCTCGAGAGGTACGGGAAGTCTCCGTACATCTACCCGATGTATGGCCT
GGGTGGCCTGCCCGAGGGCTTCTCAAGGCTGTGTGCTATCCACGGAGGGA
CCTTCATGCTGCAGTGCCCGGTTGAGGAGGTGATTTAACCCCATGAGGAC
TCTTGCCTTGTATGCTAGTTTAATTTTGAAGTACGTCCTCCCGTAAATAT
TCCCTTCTGGTTTGATTCTCGGGCGTTTGATGCTGATTTAGGCTCTTGCC
TTTCGAGATAACGAAGATCAGACACCGAGGTTTGGCACAGTGTAAATGTC
GTATCGGAGAGACGTGTCTGCCGTATCTCATGCGTGTCTTGCCTTGCCAT
GCACAATTTGCTCGTCGGGGGGGATCGTGGATGGGGACGGAACGGCACGG
CAACAGGTGCTCTTTGACGACTCTGGAGTGGCGTGGGGTATCAAGGCCAC
TATGGACGGCGTTCCTCAGGTAAGCCTGCATATACATACACCAGCTGTAT
TTTCCTGGCGGCAGCACTCACCGCATCCTGTGTACCTTAGTGGTTTTTGG
TTCATGTGGAGTCAACGTGTTTTTCAGAAACACTTACCTGCCAAATGTCA
CGGTGCATATCGTTGTATCACTGTATCCTAACAAGGGGACTCCGCGCTAG
CCCCTTGAGTCTAAAAGTCATACATTGTAGTATACCTCTAGATATGCGTT
GTGCCCAGCCTGTGGGAAAATAGGAAATAGTGCACTCAGCGTCTCATCAT
CCTGACCATTCTGGTTGCACTAATTAATTCTGAATTTGTCACAGGATATT
GTAAAATCACCAAGTGTAGGTTGTAAAGGCTTTGGCATCATCGACAGACA
GCACAGGGGGGTGGGGGCACACCTTTTGAGCGAGAGAAACGGAGCTCTTT
TTGCCACGAAACTTCCAATCGTTATGATACAAAAGAGATGAGAGGGCATG
TGTACCTTGTGAATAACCTCGTTTTGCCGTCCCGAATAGAATAGAATAGA
GACAATCGGTGAGACATGGCACTTGCTCCCTGTCTCGTTCTTGACAGCAA
GGCAAAACATGAGCCCGTTCTGCTATATACGAAGCAGGAGTTATTTTCTA
CTCTGGGCACATGTTCTTCTGTTGGTCTGACTTGATTTGATTTGATCACA
AATATGGTGTGATGTTTTGGTGTCTTGATGTCTTGATCAGGTGGCCAAGG
CGACGATGCTGATCGGAGACCCAAGCTACTTCCCCAGCCGCATGGTGAAG
CCCACGGGCATGGTTGCCCGGAGCATCTGCATCATGGACCACCCCTTCAA
CGGCACCAATGACGCCGAGTCGACCCAGATCATCATCCCAGGGAGGCAGG
CGAGTCCGTCCCCGTCCGCTCGAGTCACCTTGCCCTTTGCATGTCGATAT
TGACGACTAACTGGCTGTTGTTAACAACCGCACGTAGTACAAGCGTTCCG
ATGGACGTTACAGACGGTAGTGCTGCTGTTGTACGTATTCATGCTCTCCG
GTAAGAGATTTTTGGTTGTGTATCTGTACATGTCCCAATGTGTTGTGGTC
ACCCTTGCGGTGTGTAACGCGTTAAGCTTTTTTGGCACATGCGTATATGG
CGAAACTTGAAAGGGCCCACGTCCCGCTTTTCGTTTCCACTGCGTCGTGG
CATGTTACCGACACTCGGCTTCAGTCACATAAATAAATACTCAAACGACA
TGGGCATTGATAGAGATCCAAGATAACGAACTCCCCGCAGGTACCTAGGA
TAAGCTTGAAACGCGCCATGCATACGTTTGCCTGAGTTCTGATTTTGTTT
TATTTGGCAACAGGTGAACCGCCGCAACGACATCTACGTGTGCATGGTGT
CGTTCTCGCACTGCGTGGCCAGCCCCGGCAAGTACGTGGCCATCGCGTCC
ACGACGGTCGAGACGAGCGACCCTCTTGCCGAGCTCGCACCGGCTTTCGA
ACTCCTCGGAGACGTGATGGAAAGGTGACACGAGGGACATAGCTCTTTAG
ACACAGCAGTATATAGTAGAATACTGCTACTGCTGTGTACTCGGGTGTAG
TGTCTTCGAAGCAGTATATTTGGGAAATGAGCTACAGAGCAGTCTTCACT
CCAAGTATCTACCAGTGAAATACTATGTAATACGATGAGGAGGAACGGCT
TAGTCAAAACCCTAGATAAGCGTGATGGGACGTGATTATTTGGCCCCCCT
TGCTGAGCTCGCGCGCTTTTGTGACCAACATCGTAGGCTTTGTGAGGTTC
GTTTCTGTCATGGATTTTGGCTCTACATTCCGCATCTCTCCGTGCATGAT
ATGGCGCATCGATGTGCATCTGTGTTTGAAACTCCGTGACTGGTTTCGCA
TTTCTAGCGGCCTGTTCTTGACAAGACTGTTCTCGTGCGTGTTGTGCCTT
AACATACGTTTTTGTCTGTGTACAAACGAGCATACCGTGTCCACTACTGC
TGTCTCCTTGTCTAACCTGGAATCGTGGGTTTGATGGCAGGTTTGACGAC
GTGTCCAACACTTTGGCCCCCGTCGAGGACGGAACCGCGGACCGTTGCTT
CATCAGCGAATCGTACGACGCCACCAGGTGAGAAAAAGAGATGAGAGACG
GCCAGCCACGAAAGGAACCCTCACAAGGTTGGTAAAGGGCGGGTACATAC
AAACGATGCAAGACTAGTGAAGTGAAATATATGCGAGATTGAGGGAGACA
GGGGAGGCAAAAGACATATTTACCGTGCCTGATTGACCGGCACAATTTGC
CATGTGCCGATGGGGAAAGCTTGTTCTGGTTCATATGTGCCGTTTCGTAT
TCCCACAATCGATAATCAAGGATAGTCATGTTGATTTTTTTTATGTTTTT
TGGCTAGTGGTGCACTCTCGCTGGCCGCTTTGCTTGGTTGATTATCGGGG
CCAATGTCAAAGGGGTTACCTTGTTGGGCTGCCTCCCGGCTTTGGTACGC
CCCGCCACGCTCTCTCTATATATATATCGCTCTCTGTTTCTCGCGCGTTC
CCCCCTCAAACATCAATGGGGTGCGTGTGGGCATATTTTCCGACCAAGTT
TCCCACCTCAGTACGGCACCCCTGACAAATGTGCTGTACCTTTCTGTTAT
ATTATTATCTTGTTCGTTTGTTACAGCCACTTCGAGACCACTGCGGCCGA
CGTCCAAAGCCTGTACGAGCGTGTGACGGGCCAAAAGCTGGACCTCTCGA
TCGACCCCGAGGTGGAGCAAGACGAGGGCTGAATGAAGGAGGGCTGAAGA
TGCCTCTGCAATGATAGCTGTAGAGCTGAGCTGAGGATCTTCATTCAACC
AGTGGCAGCGTGTTGCACCTTAAGAGCTGTTCGCTGTTCTTGGCCTTGCC
TGCGTTTTATACCAGCTCTTGGGAGTATTGCACCTTAAGATTCGGGGGGT
GCAGCCAATGTGCGTCCTTCCCTCTTCTTGGGAGGGTTGGACGTCTCGGG
CATACGCCGAGCAGGAGGTCTAAGGTCAACTTTTTGTTGCAATTGGCCGT
GCCACGCAATCGGTACACTAATTTTTATCGATCAGATTGATTTGAGAAAT
GATCTAGCTTGGGTGTTTCGTTGATGATTGTGGTCGGAAAGAGAGAACGG
AGAACCCCGCAGGTTGAAAATGGTGAGGCTGGTAGACTGCGGTGCCCCAC
GGTGAGCGAGGGGGAAGAAGAGGGTTAATACGCCTGTTCCTTGTATGCAT
CTCTGCTGTCTTGTCTTTGTTTCTTCATTTCGCCGAGAAGAGCTTCTCCA
GTTTCACGCGTATCGTGCGGTACAATTCCTGGCGAGCTTGCCTCGTTTGT
TTTGTTTTGATTCGGTACCCTGGCGTTTATTGGGCTGTGCCTTCGATGGC
AATGGAAAGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6352:1262..7921+

>mRNA_L-elsbetiae_contig6352.15010.1 ID=mRNA_L-elsbetiae_contig6352.15010.1|Name=mRNA_L-elsbetiae_contig6352.15010.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2754bp|location=Sequence derived from alignment at L-elsbetiae_contig6352:1262..7921+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTCGCGGATGGAGAGTACGATGCTATCGTTATGGGCACCGGGCTCAA
GGAGGCCATCATGTCCGGACTCTTGTCCACACTCGGAATGAAGATGCTCG
CGGATGGAGAGTACGATGCTATCGTTATGGGCACCGGGCTCAAGGAGGCC
ATCATGTCCGGACTCTTGTCCACACTCGGAATGAAGGTCCTACACGTGGA
CCGCAACAACTACTACGGAGGAGAGTGCGCGTCGCTCAACCTGACCAACC
TGTACAACAAGTTCAGGCCAGGTCAGCCCCCGGCCGCTGAACTGGGCCAC
CCTACGCGCGACTACAACGTCGACCTCATCCCGAAGTTCCTCATGGCCAA
CGGTGACCTGGTCAAGATGCTACTCATGACCAAGGTCCTACACGTGGACC
GCAACAACTACTACGGAGGAGAGTGCGCGTCGCTCAACCTGACCAACCTG
TACAACAAGTTCAGGCCAGGTCAGCCCCCGGCCGCTGAACTGGGCCACCC
TACGCGCGACTACAACGTCGACCTCATCCCGAAGTTCCTCATGGCCAACG
GTGACCTGGTCAAGATGCTACTCATGACCAAGGTGACGAGATACCTTGAG
TTCAAGACCGTCGACGGCAGCTACGTGGTGAAGGGGGGCAAGGTTAACAA
GGTGACGAGATACCTTGAGTTCAAGACCGTCGACGGCAGCTACGTGGTGA
AGGGGGGCAAGGTTAACAAGGTACCGGCAACGCCAGATGAGGCTTTGCGC
ACGTCCCTGATGGGCATCTTCGAGAAGCGCCGCTTCCGTAACTTCCTGCA
GTACCTGGCTACCTACGACGAGGACAAACCCGACACGTTCAAAGGTACCG
GCAACGCCAGATGAGGCTTTGCGCACGTCCCTGATGGGCATCTTCGAGAA
GCGCCGCTTCCGTAACTTCCTGCAGTACCTGGCTACCTACGACGAGGACA
AACCCGACACGTTCAAAGGACGAGACCTTCGCCGGATGACAATGCTCCAG
CTCTACGAGGACTTTGGCCTGGATGAGAACACTCAGTCCTTCACCGGACA
CGCTATGGCTCTGCAGAGGGACGACACCTACCTGCACAAGACGAGACCTT
CGCCGGATGACAATGCTCCAGCTCTACGAGGACTTTGGCCTGGATGAGAA
CACTCAGTCCTTCACCGGACACGCTATGGCTCTGCAGAGGGACGACACCT
ACCTGCACAAGCCGGCGCTGGAGACGATCAAGAGCATCCAGCTTTACGTT
CACTCCCTCGAGAGGTACGGGAAGTCTCCGTACATCTACCCGATGTATGG
CCTGGGTGGCCTGCCCGAGGGCTTCTCAAGGCTGTGTGCTATCCACGGAG
GGACCTTCATGCTGCAGTGCCCGGTTGAGGAGGCCGGCGCTGGAGACGAT
CAAGAGCATCCAGCTTTACGTTCACTCCCTCGAGAGGTACGGGAAGTCTC
CGTACATCTACCCGATGTATGGCCTGGGTGGCCTGCCCGAGGGCTTCTCA
AGGCTGTGTGCTATCCACGGAGGGACCTTCATGCTGCAGTGCCCGGTTGA
GGAGGTGCTCTTTGACGACTCTGGAGTGGCGTGGGGTATCAAGGCCACTA
TGGACGGCGTTCCTCAGGTGCTCTTTGACGACTCTGGAGTGGCGTGGGGT
ATCAAGGCCACTATGGACGGCGTTCCTCAGGTGGCCAAGGCGACGATGCT
GATCGGAGACCCAAGCTACTTCCCCAGCCGCATGGTGAAGCCCACGGGCA
TGGTTGCCCGGAGCATCTGCATCATGGACCACCCCTTCAACGGCACCAAT
GACGCCGAGTCGACCCAGATCATCATCCCAGGGAGGCAGGCGAGTCCGTC
CCCGTCCGCTCGAGTGGCCAAGGCGACGATGCTGATCGGAGACCCAAGCT
ACTTCCCCAGCCGCATGGTGAAGCCCACGGGCATGGTTGCCCGGAGCATC
TGCATCATGGACCACCCCTTCAACGGCACCAATGACGCCGAGTCGACCCA
GATCATCATCCCAGGGAGGCAGGCGAGTCCGTCCCCGTCCGCTCGAGTGA
ACCGCCGCAACGACATCTACGTGTGCATGGTGTCGTTCTCGCACTGCGTG
GCCAGCCCCGGCAAGTACGTGGCCATCGCGTCCACGACGGTCGAGACGAG
CGACCCTCTTGCCGAGCTCGCACCGGCTTTCGAACTCCTCGGAGACGTGA
TGGAAAGGTGAACCGCCGCAACGACATCTACGTGTGCATGGTGTCGTTCT
CGCACTGCGTGGCCAGCCCCGGCAAGTACGTGGCCATCGCGTCCACGACG
GTCGAGACGAGCGACCCTCTTGCCGAGCTCGCACCGGCTTTCGAACTCCT
CGGAGACGTGATGGAAAGGTTTGACGACGTGTCCAACACTTTGGCCCCCG
TCGAGGACGGAACCGCGGACCGTTGCTTCATCAGCGAATCGTACGACGCC
ACCAGGTTTGACGACGTGTCCAACACTTTGGCCCCCGTCGAGGACGGAAC
CGCGGACCGTTGCTTCATCAGCGAATCGTACGACGCCACCAGCCACTTCG
AGACCACTGCGGCCGACGTCCAAAGCCTGTACGAGCGTGTGACGGGCCAA
AAGCTGGACCTCTCGATCGACCCCGAGGTGGAGCAAGACGAGGGCTGACC
ACTTCGAGACCACTGCGGCCGACGTCCAAAGCCTGTACGAGCGTGTGACG
GGCCAAAAGCTGGACCTCTCGATCGACCCCGAGGTGGAGCAAGACGAGGG
CTGA
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