mRNA_L-elsbetiae_contig6341.14998.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6341.14998.1
Unique NamemRNA_L-elsbetiae_contig6341.14998.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Match: D8LEZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ6_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 5.400e-152
Identity = 243/302 (80.46%), Postives = 264/302 (87.42%), Query Frame = 1 
Query: 2362 ENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIKELLGQPCLVSCMNELSTNLGTVFLMRLACGNLTKVLIPILKARRRLREETMGSDPERTFSGPEREYIKETYDVMLGTFKEYAEMIIQVFCCKGFNNSLMSLHPLLPRNQFGYATLFVAAYPLSCFMALVNNYIDIRISAWKLCQVSRRPAPRGAEDIGTWYTILTIMSSVAVVSNSAIIAFTSKLFDDRTWMTRVWIFLGIEHGMLLFKYGLETLINDTPSDVDIQLRRNEFLVSKVIHNMPDDDDEEVFRAGMPTLSDHTILKSD 3267
            ENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIKE++G PCLVSCMNELSTNL TVFL RLA GNL++V++PILKARRR REETMGSDPERTFSGPEREYIKETYDVMLGTFK+YAEMII                      QFGYATLFVAAYPLSC MALVNNYI+IRI AWKLCQVSRRP PRGAEDIGTW+TILTIMSS+AVVSNSAI+AFTS++F ++TW TRVWIFLGIEHGMLLFKY LE LINDTP+DV IQL+RNEF+VSKV++NMPDDDDEE  RAGMPTLSDHTI+ SD
Sbjct:  399 ENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIKEIIGNPCLVSCMNELSTNLSTVFLARLAVGNLSEVVLPILKARRRQREETMGSDPERTFSGPEREYIKETYDVMLGTFKDYAEMII----------------------QFGYATLFVAAYPLSCLMALVNNYIEIRIDAWKLCQVSRRPEPRGAEDIGTWHTILTIMSSMAVVSNSAIVAFTSEIFHNQTWTTRVWIFLGIEHGMLLFKYLLEALINDTPADVGIQLKRNEFIVSKVVYNMPDDDDEEAVRAGMPTLSDHTIISSD 678
[Close]
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Match: A0A6H5KB13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB13_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 7.630e-101
Identity = 168/213 (78.87%), Postives = 180/213 (84.51%), Query Frame = 1 
Query: 2416 MFQFVNSYASLVYIAFIKELLGQPCLVSCMNELSTNLGTVFLMRLACGNLTKVLIPILKARRRLREETMGSDPERTFSGPEREYIKETYDVMLGTFKEYAEMIIQVFCCKGFNNSLMSLHPLLPRNQFGYATLFVAAYPLSCFMALVNNYIDIRISAWKLCQVSRRPAPRGAEDIGTWYTILTIMSSVAVVSNSAIIAFTSKLFDDRTWMTRV 3054
            MFQFVNSYASLVYIAFIKE +G PCLVSCMNELSTNL TVFL RLA GNL++V++PILKARRR REETMGSDPERTFSGPEREYIKETYDVMLGTFK+YAEMII                      QFGYATLFVAAYPLSC MALVNNYI+IRI AWKLCQVSRRP PRGAEDIGTWYTILTIMSS+AVVSNSAI+AFTS++F D+TW TRV
Sbjct:    1 MFQFVNSYASLVYIAFIKEFIGSPCLVSCMNELSTNLSTVFLARLAVGNLSEVILPILKARRRQREETMGSDPERTFSGPEREYIKETYDVMLGTFKDYAEMII----------------------QFGYATLFVAAYPLSCLMALVNNYIEIRIDAWKLCQVSRRPEPRGAEDIGTWYTILTIMSSMAVVSNSAIVAFTSEIFQDQTWTTRV 191
[Close]
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Match: A0A835ZD27_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD27_9STRA)

HSP 1 Score: 338 bits (868), Expect = 1.100e-97
Identity = 180/304 (59.21%), Postives = 208/304 (68.42%), Query Frame = 1 
Query: 2362 ENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIKELLGQPCLVSCMNELSTNLGTVFLMRLACGNLTKVLIPILKARRRLREETMGSDPERTFSGPEREYIKETYDVMLGTFKEYAEMIIQVFCCKGFNNSLMSLHPLLPRNQFGYATLFVAAYPLSCFMALVNNYIDIRISAWKLCQVSRRPAPRGAEDIGTWYTILTIMSSVAVVSNSAIIAFTSKLFDDRTWMTRVWIFLGIEHGMLLFKYGLETLINDTPSDVDIQLRRNEFLVSKVIHNMPDDDDEEVFRAGMPTLSDHTILKSDYD 3273
            ENHRTDT YEDNLIAKTFMFQFVNSYASLV+IAFIK      C+ +CMNEL+TNLG +FL RLA GNLT+VL+P+LKAR   R      DPER  S  E+EY+ E YDVMLG F +YAEM I                      QFGYATLFVAAYPLSC MA +NNYI IR+ AWKL QV RRP PRGAEDIGTW+TIL IM  ++VVSNSA+IAFTS LF   +   R+WIF+  EHG++LFKY L  LI D P DV IQL R EF+++KV+HN PD       +     LSD TI + D D
Sbjct:  402 ENHRTDTAYEDNLIAKTFMFQFVNSYASLVWIAFIKP--RDKCVDTCMNELATNLGAIFLTRLAVGNLTQVLLPLLKARALQRRSAAALDPERMPSIAEKEYVLEIYDVMLGPFNDYAEMAI----------------------QFGYATLFVAAYPLSCLMAFINNYIAIRVDAWKLLQVCRRPEPRGAEDIGTWHTILEIMGVISVVSNSALIAFTSDLFAGHSTAQRIWIFMLFEHGVMLFKYALAVLIPDVPQDVTIQLEREEFVLAKVLHNEPDXXXXXXVKEDGALLSDRTIRQEDDD 681
[Close]
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Match: A0A7S2Y160_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y160_9STRA)

HSP 1 Score: 286 bits (731), Expect = 1.220e-83
Identity = 153/309 (49.51%), Postives = 202/309 (65.37%), Query Frame = 1 
Query: 2362 ENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIK-----ELLGQPCLVSCMNELSTNLGTVFLMRLACGNLTKVLIPILKARRRLREETMGSDPERTFSGPEREYIKETYDVMLGTFKEYAEMIIQVFCCKGFNNSLMSLHPLLPRNQFGYATLFVAAYPLSCFMALVNNYIDIRISAWKLCQVSRRPAPRGAEDIGTWYTILTIMSSVAVVSNSAIIAFTSKLFDDR--TWMTRVWIFLGIEHGMLLFKYGLETLINDTPSDVDIQLRRNEFLVSKVIHNMPDDDDEEVFRAGMPTLSDHTILKSD 3267
            ENHRTDT YED+LI KTF+FQF+NSYASL +IA+++     E+    C+ SCM++LSTNLGT+FL R   GN+T+V +P L AR +   E+  ++P+RT S  E+E+    Y VMLGTF +Y EM+I                      Q+GYATLFVAAYPL+  M  VNN+I+IR+  WKLCQ SRRP PRGAEDIGTW +IL +MS  AV++NS I+ FTS  + DR  +   R+ IF  +EH ++  KY L  +++D PS+V++QL+R EF+VSKVI N  DDDDE +   G     D  IL  D
Sbjct:   11 ENHRTDTGYEDSLIGKTFLFQFINSYASLFFIAYMQGNIPEEIPTGECVGSCMSQLSTNLGTIFLTRCLVGNITEVGVPYLAARAKESSESEDAEPDRTPSMAEKEFFASEYHVMLGTFDDYLEMVI----------------------QYGYATLFVAAYPLALLMCFVNNFIEIRVDGWKLCQHSRRPEPRGAEDIGTWMSILEVMSVTAVLTNSGIVVFTSTYYSDRGVSLPLRIVIFAIMEHCIMGIKYILAVIVDDVPSEVEMQLQRTEFIVSKVISNKGDDDDEALIEEGAQAHFDMNILVED 297
[Close]
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Match: A0A7S2RXH3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXH3_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.470e-76
Identity = 144/295 (48.81%), Postives = 191/295 (64.75%), Query Frame = 1 
Query: 2362 ENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIKELLGQP-------CLVSCMNELSTNLGTVFLMRLACGNLTKVLIPILKARRRLREETMGSDPERTFSGPEREYIKETYDVMLGTFKEYAEMIIQVFCCKGFNNSLMSLHPLLPRNQFGYATLFVAAYPLSCFMALVNNYIDIRISAWKLCQVSRRPAPRGAEDIGTWYTILTIMSSVAVVSNSAIIAFTSKLFDDRTWMTRVWIFLGIEHGMLLFKYGLETLINDTPSDVDIQLRRNEFLVSKVIHNMPDDDDEEVFRA 3225
            ENHRT+T+YED LIAKTF FQFVNS+ SL+YIAFIKE L          C  +C +EL+T LG +F+  +  GNL +V++PI+KAR + ++E+ G   +   +  E+++I E YD +LGTFK+YAEMII                      QFGY TLF+AA+PL+  +ALVNNYI+IR+  WKLCQV RRP P GAEDIGTWYT L +MS++AVVSN A+  FT       +W  RV  F  +EH +L  KY +  LI D P DV+   +R EF++SKV+ N+ D+ D+E F A
Sbjct:  188 ENHRTETQYEDALIAKTFSFQFVNSFMSLIYIAFIKEALAVNNIAGEIRCYPNCFSELNTCLGIIFIANIIAGNLAEVVVPIVKARIKEKKESKGMVLDIKMTDVEKQFIAEPYDQLLGTFKDYAEMII----------------------QFGYCTLFIAAFPLATVLALVNNYIEIRVDGWKLCQVHRRPHPTGAEDIGTWYTFLEVMSTLAVVSNMALFVFTGSQLSSWSWKERVIFFACMEHLLLSIKYLIAELIPDIPDDVEEAQKREEFILSKVVSNVADELDDESFTA 460
[Close]
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Match: A0A7S2SNR5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNR5_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.540e-72
Identity = 138/283 (48.76%), Postives = 178/283 (62.90%), Query Frame = 1 
Query: 2362 ENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIKELLGQP--CLVSCMNELSTNLGTVFLMRLACGNLTKVLIPILKARRRLREETMGSDPERTFSGPEREYIKETYDVMLGTFKEYAEMIIQVFCCKGFNNSLMSLHPLLPRNQFGYATLFVAAYPLSCFMALVNNYIDIRISAWKLCQVSRRPAPRGAEDIGTWYTILTIMSSVAVVSNSAIIAFTSKLFDDRTWMTRVWIFLGIEHGMLLFKYGLETLINDTPSDVDIQLRRNEFLVSKVIHNMPDDD 3204
            ENHRTDT +ED+LIAKTF+F+F+N YA+L+YIAFIK+   +   C  SC  EL T LG +FL+ LA  N  +V    LK R+R +EE+ G  P+R  S  E+EY  ET+D MLGTFKEYAEM                        QFGYATLF AA+PL+   ALVNN+I+IRI  WKL Q SRRP P GAEDIGTWY IL +++  +V +N  +I FT   +++R+W  R  +F   EH +L+ K+    L+ D P   +IQL R EF+  KVI N PDD+
Sbjct:  145 ENHRTDTGFEDSLIAKTFVFEFINKYAALLYIAFIKKHFVETDFCTGSCFVELGTTLGIIFLLALATDNTLEVATTFLKQRKRQKEESEGVAPDRLMSQVEKEYTAETFDKMLGTFKEYAEMTF----------------------QFGYATLFSAAFPLAPLFALVNNFIEIRIDGWKLLQCSRRPEPSGAEDIGTWYGILELIAVASVATNGLLIFFTGDGYENRSWSARFVLFAVFEHMLLMGKFATAALVPDVPRSTEIQLARQEFIEGKVIENRPDDE 405
[Close]
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Match: A0A6V2ZSX1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2ZSX1_HETAK)

HSP 1 Score: 263 bits (673), Expect = 2.050e-70
Identity = 133/288 (46.18%), Postives = 193/288 (67.01%), Query Frame = 1 
Query: 2362 ENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIKE-LLGQPCLVS-CMNELSTNLGTVFLMRLACGNLTKVLIPILKARRRLREETMGSDPERTFSGPEREYIKETYDVMLGTFKEYAEMIIQVFCCKGFNNSLMSLHPLLPRNQFGYATLFVAAYPLSCFMALVNNYIDIRISAWKLCQVSRRPAPRGAEDIGTWYTILTIMSSVAVVSNSAIIAFTSKLFDDRTWMT----RVWIFLGIEHGMLLFKYGLETLINDTPSDVDIQLRRNEFLVSKVIHNMPDDDD 3207
            ENHRTDTE+ED+LI KTF+FQF+NSYA+L Y+AFI+  +LG  C    C+N++   L T+FL+RL  GN+++VLIP LK R    +E  G+DP+RT S  E +++ + Y VMLG F +Y+EMII                      Q+GY+TLF+AA+PL+  M+ +NNY+++R+  W LC   RRP PRG EDIGTWY+IL IMS+ AVV+N++I+ FTS +F +    +    ++WIF+ +EH +   K+ L +++ DTP   ++QL R EFL  KVI+++ D+DD
Sbjct:  501 ENHRTDTEFEDSLIGKTFVFQFINSYAALFYLAFIEYYVLGGSCTGGDCINQVRNTLSTIFLIRLTSGNISEVLIPYLKFRAIKEDEAEGADPDRTLSVSEEQFLGDEYHVMLGPFDDYSEMII----------------------QYGYSTLFIAAFPLAMMMSFINNYVEMRVDGWNLCHQCRRPEPRGQEDIGTWYSILEIMSAAAVVTNASIVCFTSTVFSEGALASGSSLKIWIFVMMEHALFGVKFVLASVVEDTPEFAEVQLARVEFLEGKVINDIADEDD 766
[Close]
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Match: A0A397F6J1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F6J1_9STRA)

HSP 1 Score: 239 bits (609), Expect = 3.990e-67
Identity = 139/311 (44.69%), Postives = 187/311 (60.13%), Query Frame = 1 
Query: 2362 ENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIKELLGQPCLVS-----CMNELSTNLGTVFLMRLACGNLTKVLIPILK---ARRRLREETMGSDPERTFSGPEREYIKETYDVMLGTFKEYAEMIIQVFCCKGFNNSLMSLHPLLPRNQFGYATLFVAAYPLSCFMALVNNYIDIRISAWKLCQVSRRPAPRGAEDIGTWYTILTIMSSVAVVSNSAIIAFTSK-LFDDRTWMTRVWIFLGIEHGMLLFKYGLETLINDTPSDVDIQLRRNEFLVSKVIHNMPDDDDEEVFRAGMPTLSDHTILKSD 3267
            ENHRT+TEYEDNLIAKTF+FQFVNSYASL YIAFIK  +            C+ +L  +LG +F +RL  GN  + ++P +K   A R  + +T     +R  S  E +     YD M G F +Y EMII                      QFGY TLFV ++PL+ F+AL+NNY +IRI A+KL + SRRP P GAEDIGTW TIL IM +++VV+N A + F S   F   ++ +++W F+ +EH +LLFKY L  +I+D P DV +QL R++FL  KV+H + DDDD ++ + G     D TI   D
Sbjct:   12 ENHRTETEYEDNLIAKTFLFQFVNSYASLFYIAFIKNAIPDNACTDVAKGGCLFDLMFSLGIIFGLRLTSGNFFEAVLPYIKRKLAARFRKPDTSEDGVQRHVSAAEEQMHLGAYDNM-GIFADYNEMII----------------------QFGYITLFVVSFPLAPFLALLNNYFEIRIDAFKLAKESRRPNPHGAEDIGTWQTILEIMGTISVVTNVAAVVFVSNHTFSGMSFESKLWTFIAVEHVILLFKYVLSVVIDDVPEDVKLQLDRSKFLNDKVVHLIQDDDDADLVK-GNKLKVDLTIFDED 298
[Close]
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Match: A0A485LK58_9STRA (Aste57867_22123 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK58_9STRA)

HSP 1 Score: 252 bits (643), Expect = 4.810e-67
Identity = 146/311 (46.95%), Postives = 191/311 (61.41%), Query Frame = 1 
Query: 2362 ENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIKELL-GQPCLVS----CMNELSTNLGTVFLMRLACGNLTKVLIPILK---ARRRLREETMGSDPERTFSGPEREYIKETYDVMLGTFKEYAEMIIQVFCCKGFNNSLMSLHPLLPRNQFGYATLFVAAYPLSCFMALVNNYIDIRISAWKLCQVSRRPAPRGAEDIGTWYTILTIMSSVAVVSNSAIIAFTSK-LFDDRTWMTRVWIFLGIEHGMLLFKYGLETLINDTPSDVDIQLRRNEFLVSKVIHNMPDDDDEEVFRAGMPTLSDHTILKSD 3267
            ENHRT+TEYEDNLIAKTF+FQFVNSYASL YIAFIK L+    C  +    C+ +L  +LG +F +RL  GN  + ++P +K   A R  + ET G    RT S  E +    TYD   G F +Y EMII                      QFGY TLFV ++PL+ F+AL+NNY +IRI A+KL + SRRP P+ AEDIGTW TIL IM +++V++N A + F S   F + T  T++W F+  EHG+LLFKY L  LI+D P DV +QL R +FLV KV+H + DDDD ++ + G     D T+   D
Sbjct:  434 ENHRTETEYEDNLIAKTFLFQFVNSYASLFYIAFIKSLIPNNECTAAEKGGCIYDLMFSLGIIFCLRLTSGNFFEAILPWIKRKLAARFRKPETTGDGSARTLSAAEEQMHLGTYD-NAGVFADYNEMII----------------------QFGYVTLFVVSFPLAPFLALLNNYFEIRIDAFKLAEESRRPDPKTAEDIGTWQTILEIMGTISVMTNVAAVVFVSNHTFQNATPETKLWAFIVAEHGVLLFKYVLSILIDDVPEDVKLQLDRQKFLVDKVVHLIQDDDDADLVK-GNKLKVDLTVFDDD 720
[Close]
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Match: A0A6H5KGF6_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF6_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 9.240e-67
Identity = 126/188 (67.02%), Postives = 143/188 (76.06%), Query Frame = 1 
Query:  406 LTWCIGWSKRNHTDRPLSYAQALLQTGCEETIEATLRKRRWCFAGFVVRIENDRLPKRVLLGTMAGGTKYRGGQESEWVSRLGEDLVAFGMEDEKERGKWENSDLEPAKWFGKFEDGVVRFTRKRHAREAEASAKSQLARGADAASTAAAGPKRKRSGKLEGEGKKRKSETAVAAGRAAEAVLVANHV 969
            LT CIGWSKR  +DRPLSYAQAL+Q GCEETIEAT+RKRR CFAGFV+R+E+ RLPK +LLG MAGG  YRGGQES+WVSRLGEDLVAF M DEKE GKW+ S  +P  W+ K ED    F RK H +EAE SAK Q AR A+A ST  +GPKRKR G+    GKKR+  T V A RAAEA LVAN+V
Sbjct:   49 LTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKHMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKDPEVWYNKVEDVATWFMRKWHRQEAETSAKHQRAREAEAESTVISGPKRKRGGEAAVGGKKRRPGTNVEASRAAEAALVANYV 236
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6341.14998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ6_ECTSI5.400e-15280.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB13_9PHAE7.630e-10178.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZD27_9STRA1.100e-9759.21Calcium-activated chloride channel-domain-containi... [more]
A0A7S2Y160_9STRA1.220e-8349.51Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A7S2RXH3_9STRA1.470e-7648.81Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2SNR5_9STRA1.540e-7248.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V2ZSX1_HETAK2.050e-7046.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A397F6J1_9STRA3.990e-6744.69Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485LK58_9STRA4.810e-6746.95Aste57867_22123 protein n=1 Tax=Aphanomyces stella... [more]
A0A6H5KGF6_9PHAE9.240e-6767.02Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6341contigL-elsbetiae_contig6341:1186..8843 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score449.9
Seed ortholog evalue8.9e-124
Seed eggNOG ortholog2880.D8LEZ6
KEGG koko:K19327,ko:K19480,ko:K19497,ko:K19501
KEGG TC1.A.17.1,1.A.17.1.2,1.A.17.1.21,1.A.17.1.3
KEGG Pathwayko04740,map04740
Hectar predicted targeting categoryother localisation
EggNOG free text desc.intracellular chloride channel activity
EggNOG OGsKOG2514@1,KOG2514@2759
Ec32 ortholog descriptionAnoctamin
Ec32 orthologEc-21_006140.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Exons7
Model size4166
Cds size861
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816700.1789095-UTR-L-elsbetiae_contig6341:1185..36001622816700.1789095-UTR-L-elsbetiae_contig6341:1185..3600Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6341 1186..3600 +
1691683749.7815325-UTR-L-elsbetiae_contig6341:1185..36001691683749.7815325-UTR-L-elsbetiae_contig6341:1185..3600Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6341 1186..3600 +
1622816700.2741804-UTR-L-elsbetiae_contig6341:7953..88431622816700.2741804-UTR-L-elsbetiae_contig6341:7953..8843Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6341 7954..8843 +
1691683749.8765612-UTR-L-elsbetiae_contig6341:7953..88431691683749.8765612-UTR-L-elsbetiae_contig6341:7953..8843Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6341 7954..8843 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816700.1889796-CDS-L-elsbetiae_contig6341:3600..36711622816700.1889796-CDS-L-elsbetiae_contig6341:3600..3671Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 3601..3671 +
1691683749.7971985-CDS-L-elsbetiae_contig6341:3600..36711691683749.7971985-CDS-L-elsbetiae_contig6341:3600..3671Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 3601..3671 +
1622816700.2006805-CDS-L-elsbetiae_contig6341:4372..44781622816700.2006805-CDS-L-elsbetiae_contig6341:4372..4478Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 4373..4478 +
1691683749.8108966-CDS-L-elsbetiae_contig6341:4372..44781691683749.8108966-CDS-L-elsbetiae_contig6341:4372..4478Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 4373..4478 +
1622816700.2123106-CDS-L-elsbetiae_contig6341:5375..55131622816700.2123106-CDS-L-elsbetiae_contig6341:5375..5513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 5376..5513 +
1691683749.8198464-CDS-L-elsbetiae_contig6341:5375..55131691683749.8198464-CDS-L-elsbetiae_contig6341:5375..5513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 5376..5513 +
1622816700.2234194-CDS-L-elsbetiae_contig6341:6429..66001622816700.2234194-CDS-L-elsbetiae_contig6341:6429..6600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 6430..6600 +
1691683749.828986-CDS-L-elsbetiae_contig6341:6429..66001691683749.828986-CDS-L-elsbetiae_contig6341:6429..6600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 6430..6600 +
1622816700.2360575-CDS-L-elsbetiae_contig6341:6812..69621622816700.2360575-CDS-L-elsbetiae_contig6341:6812..6962Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 6813..6962 +
1691683749.8389907-CDS-L-elsbetiae_contig6341:6812..69621691683749.8389907-CDS-L-elsbetiae_contig6341:6812..6962Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 6813..6962 +
1622816700.2522848-CDS-L-elsbetiae_contig6341:7249..73751622816700.2522848-CDS-L-elsbetiae_contig6341:7249..7375Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 7250..7375 +
1691683749.8487878-CDS-L-elsbetiae_contig6341:7249..73751691683749.8487878-CDS-L-elsbetiae_contig6341:7249..7375Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 7250..7375 +
1622816700.263409-CDS-L-elsbetiae_contig6341:7854..79531622816700.263409-CDS-L-elsbetiae_contig6341:7854..7953Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 7855..7953 +
1691683749.8586462-CDS-L-elsbetiae_contig6341:7854..79531691683749.8586462-CDS-L-elsbetiae_contig6341:7854..7953Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6341 7855..7953 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6341.14998.1prot_L-elsbetiae_contig6341.14998.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6341 3601..7953 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6341.14998.1

>prot_L-elsbetiae_contig6341.14998.1 ID=prot_L-elsbetiae_contig6341.14998.1|Name=mRNA_L-elsbetiae_contig6341.14998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=287bp
MFQFVNSYASLVYIAFIKELLGQPCLVSCMNELSTNLGTVFLMRLACGNL
TKVLIPILKARRRLREETMGSDPERTFSGPEREYIKETYDVMLGTFKEYA
EMIIQVFCCKGFNNSLMSLHPLLPRNQFGYATLFVAAYPLSCFMALVNNY
IDIRISAWKLCQVSRRPAPRGAEDIGTWYTILTIMSSVAVVSNSAIIAFT
SKLFDDRTWMTRVWIFLGIEHGMLLFKYGLETLINDTPSDVDIQLRRNEF
LVSKVIHNMPDDDDEEVFRAGMPTLSDHTILKSDYD*
back to top

mRNA from alignment at L-elsbetiae_contig6341:1186..8843+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6341.14998.1 ID=mRNA_L-elsbetiae_contig6341.14998.1|Name=mRNA_L-elsbetiae_contig6341.14998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7658bp|location=Sequence derived from alignment at L-elsbetiae_contig6341:1186..8843+ (Laminarionema elsbetiae ELsaHSoW15)
AGAAGATGATGTCGGTCATCGTACGCATGGCCAGTCAGTTCGGCCTGATG
GTGTCGGGGCCGAAGACGGAGATCATGTGCATGCTGCCGAAAGGGACGAA
ATAGTGCCTGTTCACGGACAGCGCTGGCGGCCAGACGTACAAACAGACGG
GCCAGTTCGTCTACCTTGGACGGATCATCACCGCGGACGGGAAGGTTGAC
ATGGAGATCACGAGCCGTATCTGCCGAGCATGGATTTGCTTCCGCCGGCA
CGGCGAAGCGATGTACTACAGGCGACAACAAGTCGACCGCCGGCTCAAGG
TCTGGCTACTCCAGGCCGAAGTGGTGGGGATGCTCCTGTATGGGTGCGCC
TCGTGGAGTCGTACAGCGGACCACTACACCAAACTCAATGGGACCCACCG
CCAGTCTCACATGGTGCATCGGTTGGAGCAAGCGGAACCACACGGACCGC
CCCCTGTCCTACGCCCAGGCCCTCCTCCAAACCGGCTGCGAGGAAACCAT
CGAGGCCACCCTGCGCAAACGTAGATGGTGTTTCGCGGGCTTTGTCGTGC
GCATAGAGAACGACCGCCTTCCCAAGCGCGTTCTGCTTGGAACGATGGCG
GGGGGCACGAAGTATCGGGGCGGGCAGGAGAGCGAGTGGGTTTCCCGCCT
AGGAGAAGACCTCGTGGCGTTCGGCATGGAAGACGAAAAGGAGAGGGGGA
AATGGGAGAATAGCGACCTGGAGCCGGCGAAATGGTTTGGCAAGTTCGAG
GACGGGGTGGTGCGGTTCACGAGGAAGCGGCACGCACGGGAGGCAGAAGC
CTCCGCGAAGAGTCAACTCGCGAGGGGGGCGGACGCGGCGAGCACAGCCG
CTGCTGGACCGAAGAGAAAGAGGAGTGGAAAATTAGAGGGGGAAGGCAAG
AAACGGAAATCGGAGACCGCCGTAGCAGCAGGCAGAGCGGCAGAGGCCGT
GTTGGTGGCGAACCACGTACTACACGATTACCGTAGGTGACATAAGATAC
CGCACCCCCTGGGCCAAATTTCAGAGCTCCATTACTCCGTAACGAAGAAC
GTGCCAGCACCGTACGACACGTTTTCGGACAGCCCTCGAGTAGATCTTTC
CAACGCCACCCCTTTCGGCACTGTCACTCTTCTTGCTGGGGAGGAATTGA
GCTTTGAAGATTTGTCCAGGGGGTACTTCTACTTTCATCCCCCCCCTTCC
TGCCTTGCCTTTGTGATATTTTTGCTCGTGACTTTCCTCTTGCCGGTTGT
CGTGATGCCTTCACGCATCCCTGCCTCTTTGCCTCTTTGCCTCTTGGCCC
TTTGCCTTCTCGCCCCTACTGTGGCTTGCTTGCCTCTAGTTTGCCTAGTT
TCATCTGTTGCCTTATGTGCCTTGTTGCCGCTTTTCTTTCTGGCCTTTTT
GTTTTTTTTTGGTTCCCTGCTACTTGACTCTCGGGCCACTGCCGGTCTCT
GCCGATGCCTTCCTGCCTTCCTGCCTTTTATTTTATTTGTTTATTATTGT
TCCCCCCCCCCTCCCGCACTGCACCCCTGGAATCATATCCAGGAGTGCGG
CGCGGGGTTGAGGGGTGCCTGGCTGGTGAGAACCCGACACGGAACCCTCC
GGCATTGTAGGCGGGTGTGGGAAGCCTCGGGTTTCGATAGCTCCCTTTCC
TCTACCTGACGTGGTATCTGTTTTTTTAGCTTTTTTTATTATTTTCCGAG
TGGTATGTACTCTACCTTCTGTTGTTTTTAGTGCCAGCGAGACGCAAGAC
CCCCCGGGGAGTCAGTTTAGTATCGCCTGGCGCGTATGTATGTATCGTAG
CTTTGTTTTACTTTTCTTCAGTGGCGTCGAGTGTTCCCTGTTTTTGTGGC
CACGGCCCCCCATGGGTGTTTTTGGACTAGAGAGCTAATGTGAAAAACAA
CAACCCAGGGCCGACCTTTTCGACGTCTGTTCAGTGTTTCTTGGAAGCGG
TGCTTGCCCGACCGATGGGAGACGTATGCACAAGTCGAGCTTTGATCGAT
GGTATTTACCCAATCGATAATATACGTTGCTGCTGTATAAGTTACCGTAT
AAGTTTGTAGACATGAACATCCCTACAGTTCGAAACTAAATGTGCAAGAG
ACTGCGGCCGATGTAGACCCCGCCACATCAATATCGAGCACTCTCCATCT
ACACTACTTTCGCCTGAATGCGGCCCTGTGTTCAAGTGGTGTCGACATGC
TCCGATTCCAAATTGTATTTTAATGTCGTATGTGAGCGGGTTGGGTCTAC
TTTACAATCGTTTGAAGAACCACTGGCATGTTCAAGGAATAGGCGTCCAA
CCCAGTGCCTTCCGTTCGTGACGGTTTCGGCTTTGGACGCACATGTACAC
GCACGGTTTAGGAAAACCACCGCACGGACACGGAGTACGAGGACAACCTG
ATCGCGAAGACCTTCATGTTCCAGTTCGTCAACTCCTACGCGTCCCTGGT
GTACATTGCGTTCATCAAGGAGCTATTAGGACAGCCGTAAGTACGACGAA
CGCATCAAGTTAAACCCAAGCCTTGAAGGCGAAGAAGAGGTGTTTCCTGA
AGTACACCATTTTCTTCGTCTTGTCGTGGCTCTTGCGGACGATGCCGATG
CCGATGTCGTTGTTGTTGTTGTCACAAAGCTAGCCCTCCGCTAATTTCAG
CCCGTGGTCGCAGCATGTTGAAGTGGGACCTCCCATCGTACACCAATGGG
TCCAACACAAGCCGTTTGTTACGCCCTGTATGATTACAATGACTTCCAGC
CAAGAGGCAGTTTCCCTGGGCTGACTCATGGCCGACCCTAGCTGGTGGGT
TGACGGTCACTCCGTCTTGTTTCGCAGAAGAAGGAGGCGCCTGTGGATCT
AGGGATGCTCCCTTGGTCGCTCCCGTTGCGGGCGCCTTGTGTTTTATCAC
TTTTTGCCGCCCGGTTTGTCCAAGTACTCCTCCTGTTCTATCGCGCGTGC
ACATATAGCGTACCTTGTGTTCCACGTATGTAGGTGCATCATGTTGCGCG
GTTCTATGTCGTGTTTCTTGAATCTATCTCGTGATGCATGCGACTGCCTA
AAGCAGTGCTTTCATGTAGGAGTCTCTTTCTTACGTCTCGCTCTTCTTTC
TTGCGAACACCTCGTGCTGCAAAATCAAGCTTGCTTGCGGAGTGTACCGC
GTATCTCACGAAGAAGTCTCATGTCTTGATGTTCCAGGTGCCTCGTATCT
TGCATGAATGAGCTCAGCACCAACCTCGGGACGGTGTTTCTCATGAGGCT
GGCCTGCGGCAATCTAACCAAGGTTTTAATTCCGATCCTTAAGGTACAGA
CAATACAGCAGTAATCTCGTACATAATCTCGAAATCTAGTACAGGGTCGA
ACAGGGGGCGCACCTGAAAATGCGTAACTTTCTAGCCAGAGGATGTTGAG
AGTTCATTCTTACTTTTCTGCAAGAGTGTGGCTCCGGCAATGCATATAGA
AGTATACAAGTAACGTTGCCTTTGTCTTGAGTTGCCCGGCCTGGTGGTTC
TTGAATGGGCGGGGTTCTCGCACCAAGGGGTCCTGTGCCATCTGAAGATA
AATAGTACAAAATAGCAGGGCTGACAAAGCGGCAATGCTGTCTCGTGCTA
CATATGTAGTACACGCAAAAAGAAAACATCATGCGAGGTTTTTGGTTTTT
GGAACAGAGGCACCTATGTAGATAGCCGTTCTGTGACAGTTTTTTTTTTT
TCTTTATGTATCAGCCCGACGGAGTATCGGGGTAGAATTGGTTACGCATC
CCAAAATGTAATTGTGCCCAGGATAGACACAGCACAATGGTAGAAAGAAA
AAACACACCAATACAGTTACTGCGCAGCCCCAAATAAAATTGGTGCATTG
CTTCTAAATTTTCTCGGACCCTCGTCGGGGCGCTGGTAAACGTGTGGGTA
TCCGTAAGAAAAAAATAAAAATAAAATAACCTTTACTCGCTTTCATACAT
GAGAGAAGGAGCGTTCATGACCAAAGAAAAGGAGCGATGCCATCCAAGCC
GTGAAAACCGAAGAAAGCTGTTTGCAATGCCAAAAACATGGAGGGACCGC
ACGCACACGCATACGTACGTACATATGCACGTTTGCGTAGGTTACCCTCG
GTCGGTGATATATTCGTGCGCCCTAAACGGGTGTTCATTCGGGGAACGCA
CATTGTTTCATTGGGAGATGTCTCTGGTACCGTCCCGTAGGCACGCAGGA
GGCTGCGGGAAGAGACGATGGGGTCTGACCCAGAGAGGACGTTCAGCGGC
CCGGAGCGGGAGTACATCAAGGAGACATATGATGTCATGCTTGGGACCTT
CAAGGAGTACGCGGAGATGATCATACAGGTGAGACGTTGGGTCCTGAACA
GCCTCGGGTTTTTGAACACTTGCGGTTTATGGTCTTGTTCGGTTTTGATC
TATCTAGTCTTTTTCGGGCCATTATGGGTGTATCACTGGTGTGACGGCGA
AACGGCAACCTTTTTCAATCCGAATCGAACAGCATACACATACATCCACG
CACCACCAATCAATATTAGTAAGAAGAGCACGGATCCAACACATTCATGT
TGCTCGTGTCGGTTCTAACGCCTTCTGGGATGGCAAAGTTAGATCTGCCT
GGCTTTCACCCTCGCTATTTCTTCAGGAATGCGTTCCTAAAGTAAGAAAG
GGAGGGAGAGGGAGGCGAGAGAGCACTCGGAACAAGTATAGCCTGGAAAT
CGTATTCATACGAAAGAGTAGCAGGATCAAGACGAAAGTGCGTGACCCTC
CTCGCACGAATCAAAAGAGCAACCGGTCAATCAAGCCCCCAACAAGAGAC
ATGCCCTTCGCGTGTGCAGTAAGGCGACGGTGGCGCCGCGGGGTCTCAGC
GCGTCGTGTAGCACGGTCGAGCTTAACTACTGTCTGTAGGCTTGCGCACA
TATGTACATGCGTGCACACACGGAGAAAAGCTTCGATAGAAAAAGCACGT
GTAAGCGCCAGCGTTGCTTGAAGTGCATCGATGGTCTGACAGCAGTATGT
GCTAGCGATAACACTGACACCAGAAGAGGGACTCTGTATCTGTAGTGGTT
GGTGGAATCTACTCGTGGCCAAAAATCCAGCAACACATATAATACCCCCC
CCCCTATGTGCTATATTATGATAAGCTCTTCGTACGCAACTTTCCATTTG
AAATCTAGCCAAGGGCTACGTTTTTTGCACCAACCAAGTTCTACCTCCTT
CTCTTCTGATCATAGGTTGCCCCACGAATGCGGTTATCATGCAGGTATTT
TGCTGCAAGGGGTTCAATAACTCGCTCATGTCGCTCCATCCGCTCTTGCC
TCGAAACCAGTTTGGCTATGCAACCCTCTTTGTTGCGGCTTACCCGCTTT
CGTGCTTCATGGCCTTGGTCAACAACTACATTGATATCAGAATTAGCGCT
TGGAAGCTTTGTCAGGTGAGAGATCAAAAGCTACGTCGACGATACCTTGG
GTTGTACCAGAAAGTCCATCCAGATCTCGTGGTCTTGTGTGCGGCGTCAA
GGCTTCAGCGTGTGCCTACTTCTTTGTCGAACAAGTCAAAAGCCATGGCA
TCACACGTGCTGTAGAATCCTTCCAAACCTCAAAATGATACCTTTTACCT
TGTCTTTTATGCTCGCGACGAGTGCAGGTTTCTAGAAGGCCGGCGCCGCG
AGGGGCGGAAGACATTGGCACGTGGTACACCATCCTGACCATAATGTCCT
CCGTGGCTGTGGTGAGCAACAGCGCGATCATCGCCTTCACCAGCAAGCTT
TTCGACGACCGGACGTGGATGACGAGGGTAAGGAAGAGGGAAATAAATAC
GGAGGTAGAAGCAGAAACTAGTACGGATTTATGATATTGAGGAGTTTTTG
AGAGAAACAGAGAGGGGTAACGATGACTAGCTGGAACGGAACGGCCACAA
ACATATTGTGGCAACGCGCCCTTGAATCGCGGGGAAAGCGTTTGTCTTCG
CACGAGCCGGGGATGATGCAGCCCAATGGTTAGCTGACTGCATTGCTAGC
CTGCTTCCGGTCTTTCAAATGTTCGATCAAATTCTCGCCGACGCCATGAT
TGTAAAACGTGAAGGTGTGGATTTTCCTCGGGATTGAGCACGGCATGCTG
CTGTTCAAGTACGGGCTCGAAACGCTCATCAACGATACTCCATCGGATGT
GGATATCCAGCTGAGGCGGAATGAGTTCCTCGTGTCTAAGGTACATTTGT
ATGATTGTCGTACAAGTGCCTTCGCGTCTGGGGTGTGAGTACCGCCTGCT
CTCCCGCCAAAACGTTCATGTTACATCCGTGGTCTGAAAGGGCGGGGTTC
GTGCAATTGACACAAAGTTCGTAGACACAGCTAGGTACTTAGTTTCCTGG
TTAGGGAAAAGGGCCGCTTACTCAGAAGTTCAGCAAATCAAGCGAAATAA
GTGTGGACCCCCAGCGACGGGAGGGTTGTTCCATGAGAACCCAGCCGCAC
ACCATTTTGTAGTATCGGAAGGATATGGACTCACATGCCGATGTATGTAC
AGTATGCGTGGACACAAGAAAACTGATGCACGGGAATTCAATGGGCTTGT
ACGTGCCGATGCTGGAATATTTGCTTGCGATGTCACGGCGATCGATCAAC
CAGCACATCCCTTGACTTTGTGTCATGCTCATTTTCCCGTTCATCACGAA
TGCTGTAATAACCATCCAGGTGATCCACAACATGCCAGATGATGACGATG
AAGAGGTGTTTAGAGCAGGCATGCCTACTCTCTCTGACCACACAATCCTG
AAGTCAGATTACGACTGACTGCTGTGATGTACGTTCTCACATCATTAGAC
AGATTGGCCGGAGAGACTTGCTGGTTTGCTTTGAGGGTTTGTTATTCTCG
TGTTGCTACATATTTTTTTACTGATTTGTGCTGAGCTTGTTTCGTTGTAT
AGTGCATAGGCCTGGAAGGTGGCTTCGGTATGCAAAAGTCTAGAAGGATA
CAGCCGTAGGACGCATAAAAAGAGGTCTGGTTTGGGATAGTCTACACAGA
TAGTCTAGACTAGAGCGAATGTTTGAAATGCTCAAAACAGATGGCACAAC
GAGATTTACTAGACTTACATGCTCGTATGTTGTGCTTTCGTTTACAAAAG
CGCGCTATGTCCATCGAAAGGATGCACTGCGTAGTTGAAGTTGCGGGGAA
TAGACTGCTGGTTCTGATTTCTTCCTCTTTCAAATCAGTACAATAAGAAC
ACGTGTTTGGCACCGCAATTTCTATAGGTGTCGAGATCCGTTTGATTCTT
TTCAGCCCCATTAACTTGAGGGTGCATCCTGGCTATCTTCGCGTGTCTGC
TATTTGGGGCTGGTTCGCAAGGCATGTGTGCTTGCTTGTTAAGCAAAACC
CGACTAGGTTGACAGAAAAGGGGGGCGTTTTGAGGTGGTTTGAAAACACA
AAGTTCTCCAGATCGAAAGCTAATATTGTGCACCGCTCCTGCTGTGCTCC
GACTACGTTTCTCCAAAGGGTGTTGTTGTAAGGGTTGCTCAGCCGAAGAC
CATGTCTCCAAAGACCTCGAGCGCTCCATGGCCGACCCTCACTGCTGTCT
ACCCCAAGCGTGCGCATGCCCTCGTTTTGCAGACACACAAAAATGTAGTA
TGCTCGGTGCAGACTAGGGTTCAAACGGTCGACCGTGATGCATACTGCTC
TCTGCTCT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6341:1186..8843+

>mRNA_L-elsbetiae_contig6341.14998.1 ID=mRNA_L-elsbetiae_contig6341.14998.1|Name=mRNA_L-elsbetiae_contig6341.14998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1722bp|location=Sequence derived from alignment at L-elsbetiae_contig6341:1186..8843+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCCAGTTCGTCAACTCCTACGCGTCCCTGGTGTACATTGCGTTCAT
CAAGGAGCTATTAGGACAGCCATGTTCCAGTTCGTCAACTCCTACGCGTC
CCTGGTGTACATTGCGTTCATCAAGGAGCTATTAGGACAGCCGTGCCTCG
TATCTTGCATGAATGAGCTCAGCACCAACCTCGGGACGGTGTTTCTCATG
AGGCTGGCCTGCGGCAATCTAACCAAGGTTTTAATTCCGATCCTTAAGGT
GCCTCGTATCTTGCATGAATGAGCTCAGCACCAACCTCGGGACGGTGTTT
CTCATGAGGCTGGCCTGCGGCAATCTAACCAAGGTTTTAATTCCGATCCT
TAAGGCACGCAGGAGGCTGCGGGAAGAGACGATGGGGTCTGACCCAGAGA
GGACGTTCAGCGGCCCGGAGCGGGAGTACATCAAGGAGACATATGATGTC
ATGCTTGGGACCTTCAAGGAGTACGCGGAGATGATCATACAGGCACGCAG
GAGGCTGCGGGAAGAGACGATGGGGTCTGACCCAGAGAGGACGTTCAGCG
GCCCGGAGCGGGAGTACATCAAGGAGACATATGATGTCATGCTTGGGACC
TTCAAGGAGTACGCGGAGATGATCATACAGGTATTTTGCTGCAAGGGGTT
CAATAACTCGCTCATGTCGCTCCATCCGCTCTTGCCTCGAAACCAGTTTG
GCTATGCAACCCTCTTTGTTGCGGCTTACCCGCTTTCGTGCTTCATGGCC
TTGGTCAACAACTACATTGATATCAGAATTAGCGCTTGGAAGCTTTGTCA
GGTATTTTGCTGCAAGGGGTTCAATAACTCGCTCATGTCGCTCCATCCGC
TCTTGCCTCGAAACCAGTTTGGCTATGCAACCCTCTTTGTTGCGGCTTAC
CCGCTTTCGTGCTTCATGGCCTTGGTCAACAACTACATTGATATCAGAAT
TAGCGCTTGGAAGCTTTGTCAGGTTTCTAGAAGGCCGGCGCCGCGAGGGG
CGGAAGACATTGGCACGTGGTACACCATCCTGACCATAATGTCCTCCGTG
GCTGTGGTGAGCAACAGCGCGATCATCGCCTTCACCAGCAAGCTTTTCGA
CGACCGGACGTGGATGACGAGGGTTTCTAGAAGGCCGGCGCCGCGAGGGG
CGGAAGACATTGGCACGTGGTACACCATCCTGACCATAATGTCCTCCGTG
GCTGTGGTGAGCAACAGCGCGATCATCGCCTTCACCAGCAAGCTTTTCGA
CGACCGGACGTGGATGACGAGGGTGTGGATTTTCCTCGGGATTGAGCACG
GCATGCTGCTGTTCAAGTACGGGCTCGAAACGCTCATCAACGATACTCCA
TCGGATGTGGATATCCAGCTGAGGCGGAATGAGTTCCTCGTGTCTAAGGT
GTGGATTTTCCTCGGGATTGAGCACGGCATGCTGCTGTTCAAGTACGGGC
TCGAAACGCTCATCAACGATACTCCATCGGATGTGGATATCCAGCTGAGG
CGGAATGAGTTCCTCGTGTCTAAGGTGATCCACAACATGCCAGATGATGA
CGATGAAGAGGTGTTTAGAGCAGGCATGCCTACTCTCTCTGACCACACAA
TCCTGAAGTCAGATTACGACTGAGTGATCCACAACATGCCAGATGATGAC
GATGAAGAGGTGTTTAGAGCAGGCATGCCTACTCTCTCTGACCACACAAT
CCTGAAGTCAGATTACGACTGA
back to top