mRNA_L-elsbetiae_contig6325.14973.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.010e-39 Identity = 89/143 (62.24%), Postives = 102/143 (71.33%), Query Frame = 1 Query: 1 MCPLHQAGLSRCLDAFIIALNQASDGERWYTSTKELQLASLEFCAACRSAPTLHVTVEKGTPTRLWMG-APARETRSAKRRSSTRVPVVRAHRVTWKLSASALRNM-GDVFLKVKRFTLDEDFNGDV-RGVTWPRQLQSLTFG 420 MC L +AG SRCLDA IIALNQAS GE WYTST +LQLASLE CA+CRS L + V+ GTPTRLW G A RETRS KRR+ TRVPVVRA VTWKL ALRNM GD + +V F+L F+ D+ RG+ WP +L L G Sbjct: 1 MCFLARAGPSRCLDALIIALNQASGGE-WYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLLGLG 142
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE) HSP 1 Score: 144 bits (364), Expect = 1.490e-34 Identity = 85/139 (61.15%), Postives = 97/139 (69.78%), Query Frame = 1 Query: 16 QAGLSRCLDAFIIALNQASDGERWYTSTKELQLASLEFCAACRSAPTLHVTVEKGTPTRLWMG-APARETRSAKRRSSTRVPVVRAHRVTWKLSASALRNM-GDVFLKVKRFTLDEDFNGDV-RGVTWPRQLQSLTFGV 423 + G SRCLDA IIALNQAS GE WYTST +LQL SLE CAACRS L + V+ GTP RLW G A RETRS KRR+ TRVPVVRA VTWKL ALRNM GD + +V F+L F+ D+ RG+ WP +L FGV Sbjct: 37 ETGPSRCLDALIIALNQASGGE-WYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLT--LFGV 172
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Match: D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI) HSP 1 Score: 115 bits (289), Expect = 3.060e-26 Identity = 68/135 (50.37%), Postives = 83/135 (61.48%), Query Frame = 1 Query: 22 GLSRCLDAFIIALNQASDGERWYTSTKELQLASLEFCAACRSAPTLHVTVEKG-TPTRLWMGAPARETRS-AKRRSSTRVPVVRAHRVTWKLSASALRNMGDVFLKVKRFTLDEDFNGDVRGVTWPRQLQSLTFG 420 G RCL+AF +ALN + DG WYTSTKELQLASL+FC CR P+LH+ V P RLW A E R+ AKR S+T VPV R VTW A L ++ VF KV+RF + +D D V WP +L+ L FG Sbjct: 3 GPGRCLEAFAVALNTSCDGNVWYTSTKELQLASLQFCVKCRKVPSLHLAVNNAHVPARLWNDHAATEARTGAKRPSTTPVPVFRPREVTWGRPAWLLSDICLVFAKVERFLVRQDTVVD--DVVWPCRLKKLFFG 135
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Match: D8LCS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS9_ECTSI) HSP 1 Score: 105 bits (262), Expect = 1.180e-21 Identity = 62/138 (44.93%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 28 SRCLDAFIIALNQASDGERWYTSTKELQLASLEFCAACRSAPTLHVTVEKGTPTRLWMGAPARETRSAKRRSSTRVPVVRAHRVTWKLSASALRNMGDVFLKVKRFTLDED-------FNGDVRGVTWPRQLQSLTFG 420 SRCLDA I+AL A DG+ WYT T +LQLASL+FC ACR+ PT+H+TV+ P RL G ++RVP R VTW +ALR DVF V+ L FN V G+ P LQ LTFG Sbjct: 83 SRCLDALIVALTNAGDGQGWYTPTTQLQLASLDFCTACRAVPTVHLTVDGDVPARLKAGID--------NGGASRVPAFRPRCVTWNKPIAALRGEDDVFADVRVLVLGHGLGRVGVRFNRWVDGLQLPPALQDLTFG 212
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 106 bits (265), Expect = 7.820e-21 Identity = 59/131 (45.04%), Postives = 78/131 (59.54%), Query Frame = 1 Query: 28 SRCLDAFIIALNQASDGERWYTSTKELQLASLEFCAACRSAPTLHVTVEKGTPTRLWMGAPARETRSAKRRSSTRVPVVRAHRVTWKL-SASALRNMGDVFLKVKRFTLDEDFNGDVRGVTWPRQLQSLTF 417 S CL +ALN+ DG+ WYTSTKELQLASLE C ACR TLH+TV+ TP RL A A + KR TRVP +RA R TW + +AS +R + V + F+G + + WPR+L+++ F Sbjct: 134 SSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADA-PSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEF 263
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 1.020e-20 Identity = 56/100 (56.00%), Postives = 66/100 (66.00%), Query Frame = 1 Query: 22 GLSRCLDAFIIALNQASDG--ERWYTSTKELQLASLEFCAACRSAPTLHVTVEKGTPTRLWMGAPAR---ETRSAKRRSSTRVPVVRAHRVTWKLSASAL 306 G +R DAF IAL+QA +G +RWYTST ELQL SL+ C ACRS PTLHV V GTPT LW + T+S+K R +RVPVVRA R+TW S L Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETL 104
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 2.020e-20 Identity = 60/138 (43.48%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 13 HQAGLSR--CLDAFIIALNQASDGERWYTSTKELQLASLEFCAACRSAPTLHVTVEKGTPTRLWMGAPARETRSAKRRSSTRVPVVRAHRVTWKLSASA-LRNMGDVFLKVKRFTLDEDFNGDVRGVTWPRQLQSLTF 417 + GL+ CL + I+ALN+ DG WYTSTKELQ ASLEFC ACR+ P +H+ V+ P L A A KR TRVP +RA VTW + A+A L N V F+G + VTWPR+L+ + F Sbjct: 5 EETGLTHNPCLSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHP-KRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEF 141
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 102 bits (255), Expect = 2.340e-20 Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 34 CLDAFIIALNQASDGERWYTSTKELQLASLEFCAACRSAPTLHVTVEKGTPTRLWMGAPARETRSAKRRSSTRVPVVRAHRVTWKL-SASALRNMGDVFLKVKRFTLDEDFNGDVRGVTWPRQLQSL 411 CL+A I+ALN+ SDG+ WYTSTKE QLASLEFC ACR+ TL + V+ TP RL A A KR TRVP +RA RVTW + +A+ LRN + F + V WPR+L+++ Sbjct: 12 CLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHP-KRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLKTV 137
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 104 bits (259), Expect = 5.730e-20 Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = 1 Query: 34 CLDAFIIALNQASDGERWYTSTKELQLASLEFCAACRSAPTLHVTVEKGTPTRLWMGAPARETRSAKRRSSTRVPVVRAHRVTWKL-SASALRNMGDVFLKVKRFTLDEDFNGDVRGVTWPRQLQSLTF 417 CL+A +AL + DG+ WYTSTKELQLASLEFC ACR+ TLH+ V+ P R+ + A + KR S RVP +RA VTW + +A+ LR+ + + F G + VTWPR+L+S+ F Sbjct: 36 CLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIP-RMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAF 163
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 101 bits (252), Expect = 1.410e-19 Identity = 64/154 (41.56%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 34 CLDAFIIALNQASDGERWYTSTKELQLASLEFCAACRSAPTLHVTVEKGTPTRLWMGAPARETRSAKRRSSTRVPVVRAHRVTWKL-SASALRN------------MGDVF------------LKVKRFTLDEDFNGDVRGVTWPRQLQSLTFG 420 CL+A I+ALN+ DG+ WYTSTKELQLASL+FC ACR+ T+H+ V++ P RL A A KR TRVP +R+ RVTW + +A+ LR GD F L+ F D F+ + V WP LQ++TFG Sbjct: 51 CLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHP-KRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFG 203 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6325.14973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6325.14973.1 >prot_L-elsbetiae_contig6325.14973.1 ID=prot_L-elsbetiae_contig6325.14973.1|Name=mRNA_L-elsbetiae_contig6325.14973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=504bp MCPLHQAGLSRCLDAFIIALNQASDGERWYTSTKELQLASLEFCAACRSAback to top mRNA from alignment at L-elsbetiae_contig6325:4219..5730- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6325.14973.1 ID=mRNA_L-elsbetiae_contig6325.14973.1|Name=mRNA_L-elsbetiae_contig6325.14973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1512bp|location=Sequence derived from alignment at L-elsbetiae_contig6325:4219..5730- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6325:4219..5730- >mRNA_L-elsbetiae_contig6325.14973.1 ID=mRNA_L-elsbetiae_contig6325.14973.1|Name=mRNA_L-elsbetiae_contig6325.14973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3024bp|location=Sequence derived from alignment at L-elsbetiae_contig6325:4219..5730- (Laminarionema elsbetiae ELsaHSoW15)back to top |