mRNA_L-elsbetiae_contig6322.14967.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Match: D8LLS6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS6_ECTSI) HSP 1 Score: 368 bits (944), Expect = 7.100e-112 Identity = 333/631 (52.77%), Postives = 380/631 (60.22%), Query Frame = 1
Query: 1 SALSSLCLALAVLLGWRNTAFVSGAFGVIAGAVLFFTVDHNPAMPPTAPGYTRLADDEPLPPPXXXXXL--------QETLSKLPPLPAAGAGAGAAGHSAVSFAAGAVTGNGAGGGEHASYGGCVGDGGGGSRDCRSVLL----RSILPVAAAAGSQAXXXXXXXSPSAXXXXXXXSYEYYHGAPAAGGEGPAPGGALGXXXXXXXXXXXXXXXXFSGKAPSPPPPRFIVGDDSP-GGCGVGRRNERFASSSACPDSPPGGAVDNDPPGFDPGQKEGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGRG----GGDAGDQELETYPAVATGAXXXXXXDPFAAPSYSAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFKKNDLVQALGMIASNRVVLVLFAASSARMIATWATAGYMAIYYHREFPSQTSMYSVLNACFVSVGGMASSYGGGVLTDRLRVRNEGVLGYIPALGSLAAILPVAVVLFSESFYVSIFMLFLTYLVGECWLGPGMACLQMELPKEIAGTSVAILLFLNSVVCNLGTWFIGMMDDGLATIRKPLFAVLFLSYASAFLLFALLGLMVSNKHQR 1842
SA+SSLCLALAVLLGWRNTAF++GAFGV+AGAVLFFTV+HNP MPP+ GYT+L D XXXXX E +KL PLP + A AG VSFA G GAGG A YGGCVG G +R + R L A A ++XXXXXXX XXXXXXX GG +G G PP RF+ + P G GRR R S P + G +P P EG+ GRG P A GA P++A XXXXXXXXXXXXX XXXXXXXXXXXXXXXX XXXXXXXXXXXX K+DL +AL MI SNRVVLVLFAASSARMI TWA+AGYMA+YYHR++PSQ ++YSV+NA FVSVGGMASSYGGGV++DRLRVRNEGVLGYIPALGSLAAI P+AVVLF++ FYVS+ LF++YLVGECWLGPGMACLQMELPKE+AGTSVAILLFLNSV+CN+GTWFIG MD GLAT+RKP FAVLF+SY ++F+LF +LGLMVS KHQR
Sbjct: 138 SAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPDXXXXXXXXXXXXXXXXXXXXSHEKCTKLEPLPPSAAMAGVGHRKVVSFADSNGNGGGAGG-ARALYGGCVG---GETRTADPAVSNGDDRQELAAAEAGRRESXXXXXXXXXXXXXXXXXXXXXXXXSR----------GGTVGSSGSGGDIAPARWAAP--GAXXXAPPARFLAPLEPPIQAAGGGRRTTRADVSGRNPFAKSG-----NPFAVSPSAAEGQGRGCGAGRWVDDDGAAGCEEDRGTRG-------GRGRRXXXXXXXXXXXXDQPIAAGGAGASDA--PYSAALVXXXXXXXXXXXXXXXXXYDEXXXXXXXXXXXXXXXXPAGGAGRWKDVEDSGPRRGXXXXXXXXXXXXXLGKHDLGEALRMIVSNRVVLVLFAASSARMIGTWASAGYMAVYYHRQYPSQVALYSVINAGFVSVGGMASSYGGGVISDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFAKDFYVSVGALFVSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYLTSFVLFGVLGLMVSRKHQR 738
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Match: A0A6H5KX10_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX10_9PHAE) HSP 1 Score: 347 bits (889), Expect = 5.230e-103 Identity = 356/808 (44.06%), Postives = 407/808 (50.37%), Query Frame = 1
Query: 1 SALSSLCLALAVLLGWRNTAFVSGAFGVIAGAVLFFTVDHNPAMPPTAPGYTRLADDEPLPPPXXXXXL---------QETLSKLPPLPAAGAGAGAAGHSAVSFAAGAVTGNGAGGGEHASYGGCVGDGGGGSRDCRSVLLRSILPVAAAAGSQAXXXXXXXSPSAXXXXXXXSYEYYHGAPAAGGEGPAPGGALGXXXXXXXXXXXXXXXXFSGKAPSPPPPRFIVGDDSP-GGCGVGRRNERFASSSACPDSPPGGAVDNDPPGFDPGQKEGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGRGGGDAGDQELETYPAVATGAXXXXXXDPFAAPSYSAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----------------FKKNDLVQALGMIASNRVVLVLFAASSARMIATWATAGYMAIYYHREFPSQTSMYSVLNACFVSVGGMASSYGGGVLTDRLRVRNEGVLGYIPALGSLAAILPVAVVLFSESFYVSIFMLFLTYLVGECWLGPGMACLQMELPKEIAGTSVAILLFLNSVVCNLGTWFIGMMDDGLATIRKPLFAVLFLSYASAFLLFALLGLMVSNKHQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAPSMCEMVRRTLSRS--GGGXXXXGQTSSFGDXXXXXXXRRGPRFGXXXXXXXXXXXXXALPGAPDGDRGRDESAALVGGSDGDGHGPWGAVA---------------RRPLLPRGRSSTRRGGGDGG 2295
SA+SSLCLALAVLLGWRNTAF++GA GV+A AVLFFTV+HNP MPP+ GYT+L D XXXXX E +KL PLP + A +G VSFA E GGC G G+R A A AXXXXXXX XXXXXXXXXXXXX SG P R+ + P G+R R S P + G P D GQ G GRG + + P A GA AP YSAAL XXXXXX XXXXX X XXXXXXXXXXXXXX K+DL QAL MI SNRVVLVLFAASS RMI TWA+AGYMA+YYHR++PSQ ++YS++NA FVSVGGMASSYGGG ++DRLRVRNEGVLGYIPALGSLAAI P+AVVLF++ FYVS+ LFL+YLVGECWLGPGMACLQMELPKE+AGTSVAILLFLNSV+CN+GTWFIG MD GLAT+RKP FAVLF+SY ++F+LF +LGLMVS KH+R R A SMCEMVRRT SR+ GGG G SS RFG G G RG++ A+ G SD + H P A RRP++ RGRS+TR G GG
Sbjct: 116 SAISSLCLALAVLLGWRNTAFLAGASGVLAAAVLFFTVEHNPVMPPSEDGYTKLPDXXXXXXXXXXXXXXXXXXXXXSHEKCTKLEPLPPSAAMSGVGHRKVVSFA------------ESNDNGGCAG----GARP----PYXXXXXXETRASDPAVSNGDDRQDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGSSGSGGDIAPARWTAPGEPPIQAASGGKRTTRADVSGRNPFAKSGNPFAVSPSAAD-GQGRGGGAGRWVDGDGAAGCEEDRGARGGRGRENRS---GRGXXXXXXADRD-QPIAAGGAGASD------AP-YSAALVXXXXXXKDLNNGKGWGWYDEEDHAXXXXXGXAATPAGGAGRWKDVADSXXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXLGKHDLGQALRMIVSNRVVLVLFAASSVRMIGTWASAGYMAVYYHRQYPSQVALYSIINAGFVSVGGMASSYGGGAISDRLRVRNEGVLGYIPALGSLAAIGPMAVVLFAKDFYVSVGALFLSYLVGECWLGPGMACLQMELPKELAGTSVAILLFLNSVICNIGTWFIGKMDSGLATVRKPFFAVLFMSYVTSFVLFGVLGLMVSRKHRRRNSCLLSLRAAGILEEETGPGCGGSSSAKECASGGNG-RAATSMCEMVRRTFSRAAGGGGQSLDGPPSS-------------DRFGEF--------------GGLAGGRGQE---AINGYSDLEFHVPGQRYAAXXXXXXXXGGYAPVRRPVVTRGRSATRGDTGIGG 860
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Match: A0A835Z7U8_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U8_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.710e-40 Identity = 87/187 (46.52%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 1264 VLVLFAASSARMIATWATAGYMAIYYHREFPSQTSMYSVLNACFVSVGGMASSYGGGVLTDRLRVRNEGVLGYIPALGSLAAILPVAVVLFSESFYVSIFMLFLTYLVGECWLGPGMACLQMELPKEIAGTSVAILLFLNSVVCNLGTWFIGMMDDGLATIRKPLFAVLFLSYASAFLLFALLGLMV 1824
VL+L ASS RMI TW A Y+ Y+HR +P+ S YSV+N V+ GG+ SS GG L DR R+ G ++PALG+ ++P V LF +FYVS+ L L+ ECWLGPGMA LQ E+P+++ G SVA+LLF N+V N+G W I +D G +R P+F L LSY + L+F LG+++
Sbjct: 294 VLLLLLASSLRMIGTWVGAAYLPTYFHRAYPAYESQYSVINGVIVAAGGVLSSSVGGALADRWGKRSPGGYAWVPALGAALGLMPAGVALFCGNFYVSMAALGAQNLLAECWLGPGMAILQREVPRDMVGVSVAVLLFCNTVTANVGPWIISAIDPGTDAVRDPIFCQLALSYLGSALVFGWLGVLL 480
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Match: A0A835Z7W4_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W4_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.310e-25 Identity = 79/232 (34.05%), Postives = 114/232 (49.14%), Query Frame = 1
Query: 1237 LGMIASNRVVLVLFAASSARMIATWATAGYMAIYYHREFPSQTSMYSVLNACFVSVGGMASSYGGGVLTDRLRVRNEGVLGYI----PALGSLAAILPVAVVLFSESFYVSIFMLFLTY--------------------------------LVGECWLGPGMACLQMELPKEIAGTSVAILLFLNSVVCNLGTWFIGMMDDGLATIRKPLFAVLFLSYASAFLLFALLGLMV 1824
L ++A+ RVVL+L A +S RMI TW A Y Y+ R FP++ YS +N V+ GG+ASS+ PA+G+ A ++P L+ +FY ++ +L L L+ ECWLGPGMA LQ E+P+++ G SVA+LLF NS+ N+G W I D G A +R +F + LSY A + F LGL++
Sbjct: 287 LALLANPRVVLLLVA-TSLRMIGTWVVASYFPDYFLRAFPAREGAYSAINGAIVAAGGVASSFAXXXXXXXXXXXXXXXXXXXXXXXPAIGAAAGLVPTFFALYLGNFYAAMAVLALEVRAARCCRRRCRAACASAGRSPRSLLLQKANHNLIAECWLGPGMAILQREVPRDMVGFSVAVLLFCNSLASNVGPWIIAAADPGTADVRHSIFLTMALSYGGAAVAFGWLGLLL 517
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Match: A0A7S0I3L6_9CRYP (Hypothetical protein n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I3L6_9CRYP) HSP 1 Score: 93.6 bits (231), Expect = 4.050e-16 Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = 1
Query: 1207 GFKKNDLVQALGMIASNRVVLVLFAASSARMIATWATAGYMAIYYHREFPSQTSMYSVLNACFVSVGGMASSYGGGVLTDRLRVRNEGVLGYIPALGSLAAILPVAVVLFSESFYVSIFMLFLTYLVGECWLGPGMACLQMELPKEIAGTSVAILLFLNSV 1689
G + + V A+ + + V +LFAAS+ R A + + A Y FP+ S +SV NA +S GG+ SS GGVL DRL + G IPA+GS+ A+ ++SF SI +LFL Y+V ECW GP +A L +P+++ GT+ + L ++
Sbjct: 352 GRQLRETVTAIKGVVTVPAVQILFAASAIRFCAGYGIGVWKAPLYREMFPTSESEFSVANAFVISCGGVLSSLLGGVLADRLAPHDYGKKLLIPAVGSILAVPFWIGACKADSFSHSIALLFLEYIVAECWFGPTLAALFKVVPRDVQGTAQGLFSVLGAI 512
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Match: L1J1Q9_GUITC (MFS domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J1Q9_GUITC) HSP 1 Score: 91.3 bits (225), Expect = 7.700e-16 Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 1
Query: 1228 VQALGMIASNRVVLVLFAASSARMIATWATAGYMAIYYHREFPSQTSMYSVLNACFVSVGGMASSYGGGVLTDRLRVRNEGVLGYIPALGSLAAILPVAVVLFSESFYV------SIFMLFLTYLVGECWLGPGMACLQMELPKEIAGTSVAILLFLNSV 1689
++A+ + S V VLFAAS+ R A + + A Y FPS S +SV NA +S GG+ SS GGVL DRL + G IPA+GS+ A+ F++ SI +LFL Y+V ECW GP +A L +P+EI GT+ + L ++
Sbjct: 238 LEAIKGVLSIPSVQVLFAASAVRFCAGYGIGVWKAPLYRELFPSSESEFSVANAFVISCGGVLSSLLGGVLADRLAPHDYGKKLLIPAVGSILAV----------PFWIGACKADSISLLFLEYIVAECWFGPTLAALFKSVPREIQGTAQGLFSVLGAI 387
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Match: A0A7Y1W0B6_9GAMM (MFS transporter n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y1W0B6_9GAMM) HSP 1 Score: 70.5 bits (171), Expect = 4.950e-9 Identity = 42/122 (34.43%), Postives = 70/122 (57.38%), Query Frame = 1
Query: 1375 SVLNACFVSVGGMASSYGGGVLTDRLRVRNEGVLGYIPALGSLAAILPVAVVLFSESFYVSIFMLFLTYLVGECWLGPGMACLQMELPKEIAGTSVAILLFLNSVV-CNLGTWFIGMMDDGL 1737
S++ + VGG+A ++ GG L DRL R+ G IPA LA + V + S + V++ ++ + +G WLGP ++ +Q +P + T+ AI LF+N+++ LGT+ IG + DGL
Sbjct: 259 SLVYGAILLVGGIAGTWLGGSLADRLGERDRGAYARIPAFAFLATVPFYVVGVLSPTLLVTVLVMTVPTALGLAWLGPVISAIQHLVPPNMRATASAIFLFVNNLIGIGLGTFIIGAISDGL 380
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Match: A0A653IYQ1_9SPHN (MFS transporter n=2 Tax=Novosphingobium sp. 9U TaxID=2653158 RepID=A0A653IYQ1_9SPHN) HSP 1 Score: 64.3 bits (155), Expect = 4.940e-7 Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 1
Query: 1225 LVQALGMIASNRVVLVLFAASSARMIATWATA-GYMAIYYHREFPSQTSMYSVLNACFVSVGGMASSYGGGVLTDRLRVRNEGVLGYIPALGSLAAILPVAVVLFSESFYVSIFMLFLTYLVGECWLGPGMACLQMELPKEIAGTSVAILLFLNSVV-CNLGTWFIGMMDD 1731
LV LG++ N L +S + + T++TA ++A +Y R S ++ A V VG S+ GG++ DRL VR+ G PAL SL + + LF+ S+ ++ L LVG ++ A Q + I G + A+LL + ++V G W GM+ D
Sbjct: 231 LVAGLGLLWRNHAFRYLVLGTSLQGL-TYSTAIAWLAPFYSRVHGLDLSHVAITVALIVGVGASVGSFAGGMIQDRLIVRDVRWYGRWPALTSLGCLPLLGAQLFAHSYGAAVTFGLLGMLVGSVYVSTVNAAAQAMVSSNIRGLTSAVLLVIPALVGAGCGPWITGMLSD 400
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Match: A0A7C7YEK7_9DELT (MFS transporter n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7YEK7_9DELT) HSP 1 Score: 62.0 bits (149), Expect = 2.590e-6 Identity = 50/164 (30.49%), Postives = 80/164 (48.78%), Query Frame = 1
Query: 1309 WATAGYMAIYYHREFPSQTSMYSVLNACFVSVGGMASSYGGGVLTDRLRVRNEGVLGYIPALGSLAAILPVAVVLF-SESFYVSIFMLFLTYLVGECWLGPGMACLQMELPKEIAGTSVAILLF-LNSVVCNLGTWFIGMMDDGLATIRKPLFAVLFLSYASAF 1794
+ ++A ++ R A G+A ++ GG L DRL R+ ++PALG++ +I P + L+ S YV++ + F ++G +LGP A Q +P + T+ AILLF +N + LG +G++ D LA P F V L YA F
Sbjct: 251 YGAGAFLAAFFIRSHKMDAGEVGTWFAAIACTAGVAGTFLGGYLADRLSKRDRRWYMWVPALGTVISI-PFSFFLYLSSDPYVALALYFPGSILGGMYLGPTFAMTQTLVPASMRATAAAILLFSINMIGLGLGPQGVGILSDLLA----PTFGVESLRYALLF 409
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Match: A0A7S3CTF1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CTF1_9SPIT) HSP 1 Score: 56.6 bits (135), Expect = 9.260e-6 Identity = 41/137 (29.93%), Postives = 72/137 (52.55%), Query Frame = 1
Query: 1219 NDLVQALGMIASNRVVLVLFAASSARMIATWATAGYMAIYYHREFPSQTSMYSVLNACFVSVGGMASSYGGGVLTDRLRVRNEGVLGYIPALGS-LAAILPVAVVLFSESFYVSIFMLFLTYLVGECWLGPGMACLQ 1626
+++++ L M S V++ F + A I T+ Y+ +++ + FP + Y+++NA SV G +S GV+ D+ + G I LG LAA L +VVL + SF+ SI M + +L+ + GP + +Q
Sbjct: 17 SEILEVLKMPTSRNVLIAGFLRNFAGCIVTY----YLPVFFGKNFPMFKAEYAIVNAGIQSVFGFLASVVSGVMADKFEKKTYWAKGIILMLGQGLAAPLICSVVLTTSSFWWSISMFMVYFLIASTYAGPAITMMQ 149 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6322.14967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6322.14967.1 >prot_L-elsbetiae_contig6322.14967.1 ID=prot_L-elsbetiae_contig6322.14967.1|Name=mRNA_L-elsbetiae_contig6322.14967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=786bp SALSSLCLALAVLLGWRNTAFVSGAFGVIAGAVLFFTVDHNPAMPPTAPGback to top mRNA from alignment at L-elsbetiae_contig6322:3..7304+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6322.14967.1 ID=mRNA_L-elsbetiae_contig6322.14967.1|Name=mRNA_L-elsbetiae_contig6322.14967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7302bp|location=Sequence derived from alignment at L-elsbetiae_contig6322:3..7304+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6322:3..7304+ >mRNA_L-elsbetiae_contig6322.14967.1 ID=mRNA_L-elsbetiae_contig6322.14967.1|Name=mRNA_L-elsbetiae_contig6322.14967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4716bp|location=Sequence derived from alignment at L-elsbetiae_contig6322:3..7304+ (Laminarionema elsbetiae ELsaHSoW15)back to top |